Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0001466

Physical Location & Seq

Genomic Coordinates Reverse (-)

13581361 .. 13582848

Gene Structure 1488 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1040200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1488 bp

ATGCCTAGCGCTCTGGACCCTGTGGAATTTAGGAGGCAAGGCCACATGATGGTAGACTTCATAGCAGATTACTACCAAAATATAGAGAAGTACCCAGTCCTAAGTCAAGTTGAACCGGGTTATCTCCGAAAGTGCTTGCCGGAGTCTGCCCCAGATAACCCAGAGCCCATTGAATCCATCCTCCAAGATGTGCAGAAACACATTGTGCCTGGCCTGACACATTGGCAAAGTCCTAGTTTCTTTGCATACTTTGCTTCAAATGTTAGCATTGCTGGGTTTCTTGGTGAAATGCTTAGCACTGGATTCAACGTGGTGGGATTCAGTTGGGTATCTTCACCAGCTGCAACTGAGCTCGAAAGCATTGTCATGGACTGGCTTGGAAACCTGCTTACGCTTCCCAAATCTTTCCTTTTCTCCGGCAATGGTGGCGGTGTAATACATGGTAGTACTTGTGAGGCCATTATTTGCACCATGGTAGCCGCCAGGGATCAAATGCTAAGGCAAATTGGTCTAGACAACATCCAGAAGTTAGTTGTGTACGGGTCAGATCAAACACACAGTGCACTTCAAAAAGCTTGCCAAATTGTTGGTATCAACCCAAACAATTTCCGGGTCATCAAAACTACAAAGTCAACATTATTTGCCTTATCACCTGAATCCTTAAAATTGGCAATTTCTTCAGATGTTGAAGCTGGGCTAATGCCATTGTTTCTATGTGCTACCGTTGGTACAACTGCGACCACTGCGGTTGATCCACTGGACTCACTATGCCAAGTGGCAAAATATTATGGCATATGGGTTCATGTGGATGCGGCATATGCAGGAAGTGCCTGCATGTGCCCTGAATTTCGCCATTTCATTGATGGTGTTGAGGGTGCGAATTCATTCAGTCTTAATGCGCACAAATGGCTCTTCACTGCACTCGACTGTTGCTGTGTTTGGATTAAAGATCCAAGCACATTAACAAGTTCATTGTCAACTAATCCCGAGTTTTTGAGGAACAAGGCCACTGACTCAAAGCAAGTGGTGGACTACAAAGACTGGCAAATAGCCCTAAGCCGGAGGTTCCGGGCCATGAAACTATGGCTTGTGCTTAAGAGCTATGGCGCTGTTAACCTCAGGAACTATCTTAGGAGCCACGTCAAAATGGCCATGCTTTTTGAAGGGCTTGTTTCCACGGACAGAAGGTTTGAGGTTGTGGTGCCTAGGGTTTTCTCCATGGTTTGTTTTAGGGTTTCACCGTCTGCTGCAATAATAATTAGTGATGATGAGATTAATGTCGAAAACCATATAAATGAGGTTAATCGAAAGTTACTGGAGGGCATCAATGCATCAGGTCATGCGTTCATGACTCACGCTGTGGTTGGAGGTATGTATGTGATACGCTGCGCAATCGGTGTAACGTTGACGGAAGAAAAACACATAGCCATGGCCTGGAAGTTGGTTCAGGAGCATGCAGATGCCATCCTCATGAAAAATAATATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00350 ko00360 ko00380 ko00901 ko00950 ko00965 ko01100 ko01110 ko04726 ko04728 ko05030 ko05031 ko05034 map00350 map00360 map00380 map00901 map00950 map00965 map01100 map01110 map04726 map04728 map05030 map05031 map05034

Pfam Domains

Protein Families

Pyridoxal_deC

Protein Analysis

496

Amino Acids

54.8

Weight (kDa)

6.17

Isoelectric Point (pI)

46.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pyridoxal_deC	PF00282	39 - 412	6.7e-111	Pyridoxal-dependent decarboxylase conserved domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001466)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g09470 FvH4_3g09472 FvH4_3g09540
malus_domestica	MD01G1040200.v1.1 MD10G1256600.v1.1 MD10G1256900.v1.1
prunus_persica	Prupe.4G087100_v2.0.a1 Prupe.6G202600_v2.0.a1
pyrus_communis	pycom01g06780 pycom10g21240
rosa_chinensis	RchiOBHm_Chr1g0324861 RchiOBHm_Chr5g0015041 RchiOBHm_Chr5g0015051 RchiOBHm_Chr6g0247151
rosa_laevigata	RLG00000030170 RLG00000032163 RLG00000032164 RLG00000032165
rosa_multiflora	Rmu_sc0004577.1_g000016 Rmu_sc0004889.1_g000027 Rmu_sc0009777.1_g000012 Rmu_sc0011258.1_g000012 Rmu_sc0041940.1_g000001
rosa_roxburghii	Rroxscaffold_1G00061480 Rroxscaffold_1G00061490 Rroxscaffold_4G00325150 Rroxscaffold_7G00214310
rosa_rugosa	Rorug01G0048400 Rorug05G0023300 Rorug05G0023600.1 Rorug05G0523300
rosa_samantha	Rh1AG064600 Rh1BG053500 Rh1CG066100 Rh1CG066300 Rh1DG070800 Rh1DG070900 Rh5AG118300 Rh5BG115600 Rh5BG115700 Rh5BG115900 Rh5BG116200 Rh5CG126900 Rh5CG127100 Rh5DG115000 Rh5DG115100 Rh6AG038000 Rh6BG032900
rosa_wichuraiana	Rw1G005430 Rw5G010200 Rw5G010220 Rw6G003240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	900, 1390
Acc36I	ACCTGC	1 cut(s)	393
AccB1I	GGYRCC	1 cut(s)	1201
AccB7I	CCANNNNNTGG	2 cut(s)	49, 1434
AccI	GTMKAC	1 cut(s)	54
AciI	CCGC	4 cut(s)	429, 480, 746, 812
AclI	AACGTT	1 cut(s)	1403
AclWI	GGATC	3 cut(s)	495, 746, 944
AcoI	YGGCCR	1 cut(s)	1149
AcsI	RAATTY	3 cut(s)	26, 845, 880
AcuI	CTGAAG	1 cut(s)	663
AdeI	CACNNNGTG	3 cut(s)	205, 560, 1360
AfaI	GTAC	4 cut(s)	92, 448, 539, 730
AfeI	AGCGCT	1 cut(s)	10
AfiI	CCNNNNNNNGG	3 cut(s)	49, 1059, 1434
AflII	CTTAAG	1 cut(s)	1094
AgsI	TTSAA	7 cut(s)	113, 173, 258, 307, 569, 689, 1163
AjiI	CACGTC	1 cut(s)	1141
AjnI	CCWGG	3 cut(s)	208, 482, 1433
AluBI	AGCT	5 cut(s)	341, 352, 575, 692, 1101
AluI	AGCT	5 cut(s)	341, 352, 575, 692, 1101
Alw21I	GWGCWC	2 cut(s)	354, 565
Alw44I	GTGCAC	1 cut(s)	561
AlwI	GGATC	3 cut(s)	495, 746, 944
Ama87I	CYCGRG	1 cut(s)	986
Aor51HI	AGCGCT	1 cut(s)	10
AoxI	GGCC	7 cut(s)	40, 211, 456, 1005, 1071, 1149, 1431
ApaLI	GTGCAC	1 cut(s)	561
ApeKI	GCWGC	3 cut(s)	341, 1247, 1386
ApoI	RAATTY	3 cut(s)	26, 845, 880
ArsI	GACNNNNNNTTYG	4 cut(s)	348, 380, 1172, 1204
AseI	ATTAAT	1 cut(s)	1275
Asp700I	GAANNNNTTC	1 cut(s)	884
AspA2I	CCTAGG	1 cut(s)	1205
AspLEI	GCGC	4 cut(s)	11, 901, 1109, 1391
AspS9I	GGNCC	2 cut(s)	16, 1071
AsuC2I	CCSGG	3 cut(s)	117, 611, 1070
AsuHPI	GGTGA	4 cut(s)	296, 327, 642, 1230
AvaI	CYCGRG	1 cut(s)	986
AvaII	GGWCC	1 cut(s)	16
AvrII	CCTAGG	1 cut(s)	1205
AxyI	CCTNAGG	1 cut(s)	1118
BaeGI	GKGCMC	2 cut(s)	565, 842
BalI	TGGCCA	1 cut(s)	1151
BanI	GGYRCC	1 cut(s)	1201
BanII	GRGCYC	2 cut(s)	168, 354
Bbv12I	GWGCWC	2 cut(s)	354, 565
BbvI	GCAGC	3 cut(s)	328, 1234, 1373
BccI	CCATC	4 cut(s)	43, 185, 857, 1472
BciT130I	CCWGG	3 cut(s)	210, 484, 1435
BcnI	CCSGG	3 cut(s)	117, 611, 1070
BfaI	CTAG	4 cut(s)	6, 234, 512, 1206
BfoI	RGCGCY	2 cut(s)	12, 1110
BfrI	CTTAAG	1 cut(s)	1094
BfuAI	ACCTGC	1 cut(s)	393
BisI	GCNGC	5 cut(s)	342, 480, 813, 1248, 1387
BlnI	CCTAGG	1 cut(s)	1205
BlpI	GCTNAGC	1 cut(s)	293
BlsI	GCNGC	5 cut(s)	343, 481, 814, 1249, 1388
BmcAI	AGTACT	1 cut(s)	448
Bme1390I	CCNGG	6 cut(s)	117, 210, 484, 611, 1070, 1435
Bme18I	GGWCC	1 cut(s)	16
BmeT110I	CYCGRG	1 cut(s)	986
BmgBI	CACGTC	1 cut(s)	1141
BmgT120I	GGNCC	2 cut(s)	16, 1071
BmiI	GGNNCC	4 cut(s)	18, 1067, 1136, 1203
BmrFI	CCNGG	6 cut(s)	117, 210, 484, 611, 1070, 1435
BmrI	ACTGGG	1 cut(s)	89
BmsI	GCATC	4 cut(s)	799, 1332, 1340, 1450
BmuI	ACTGGG	1 cut(s)	89
BpmI	CTGGAG	1 cut(s)	1337
Bpu10I	CCTNAGC	2 cut(s)	497, 1055
Bpu1102I	GCTNAGC	1 cut(s)	293
BpuMI	CCSGG	3 cut(s)	117, 611, 1070
BsaJI	CCNNGG	6 cut(s)	471, 483, 1176, 1205, 1218, 1428
Bsc4I	CCNNNNNNNGG	3 cut(s)	49, 1059, 1434
Bse1I	ACTGG	6 cut(s)	95, 304, 377, 762, 1046, 1320
Bse21I	CCTNAGG	1 cut(s)	1118
Bse3DI	GCAATG	2 cut(s)	267, 427
BseBI	CCWGG	3 cut(s)	210, 484, 1435
BseDI	CCNNGG	6 cut(s)	471, 483, 1176, 1205, 1218, 1428
BseGI	GGATG	4 cut(s)	177, 519, 814, 1464
BseLI	CCNNNNNNNGG	3 cut(s)	49, 1059, 1434
BseMI	GCAATG	2 cut(s)	267, 427
BseMII	CTCAG	2 cut(s)	339, 1132
BseNI	ACTGG	6 cut(s)	95, 304, 377, 762, 1046, 1320
BseSI	GKGCMC	2 cut(s)	565, 842
BseXI	GCAGC	3 cut(s)	328, 1234, 1373
BseYI	CCCAGC	2 cut(s)	272, 692
BsgI	GTGCAG	2 cut(s)	212, 903
BshFI	GGCC	7 cut(s)	42, 213, 458, 1007, 1073, 1151, 1433
BshNI	GGYRCC	1 cut(s)	1201
BsiHKAI	GWGCWC	2 cut(s)	354, 565
BsiHKCI	CYCGRG	1 cut(s)	986
BsiSI	CCGG	6 cut(s)	116, 140, 417, 610, 1060, 1069
BslI	CCNNNNNNNGG	3 cut(s)	49, 1059, 1434
BsnI	GGCC	7 cut(s)	42, 213, 458, 1007, 1073, 1151, 1433
BsoBI	CYCGRG	1 cut(s)	986
Bsp1286I	GDGCHC	4 cut(s)	168, 354, 565, 842
Bsp143I	GATC	4 cut(s)	487, 547, 751, 949
Bsp1720I	GCTNAGC	1 cut(s)	293
Bsp19I	CCATGG	3 cut(s)	471, 1218, 1428
BspACI	CCGC	4 cut(s)	429, 480, 746, 812
BspANI	GGCC	7 cut(s)	42, 213, 458, 1007, 1073, 1151, 1433
BspCNI	CTCAG	2 cut(s)	340, 1131
BspHI	TCATGA	2 cut(s)	1347, 1470
BspLI	GGNNCC	4 cut(s)	18, 1067, 1136, 1203
BspMI	ACCTGC	1 cut(s)	393
BspPI	GGATC	3 cut(s)	495, 746, 944
BspQI	GCTCTTC	1 cut(s)	917
BspT107I	GGYRCC	1 cut(s)	1201
BspTI	CTTAAG	1 cut(s)	1094
BsrDI	GCAATG	2 cut(s)	267, 427
BsrI	ACTGG	6 cut(s)	95, 304, 377, 762, 1046, 1320
BssECI	CCNNGG	6 cut(s)	471, 483, 1176, 1205, 1218, 1428
BssMI	GATC	4 cut(s)	487, 547, 751, 949
BssT1I	CCWWGG	4 cut(s)	471, 1205, 1218, 1428
Bst2UI	CCWGG	3 cut(s)	210, 484, 1435
Bst4CI	ACNGT	4 cut(s)	560, 724, 929, 1242
Bst6I	CTCTTC	1 cut(s)	917
BstAFI	CTTAAG	1 cut(s)	1094
BstAPI	GCANNNNNTGC	2 cut(s)	251, 827
BstC8I	GCNNGC	4 cut(s)	137, 577, 832, 1455
BstDEI	CTNAG	7 cut(s)	101, 293, 348, 497, 1055, 1118, 1130
BstDSI	CCRYGG	4 cut(s)	471, 1176, 1218, 1428
BstF5I	GGATG	4 cut(s)	177, 519, 814, 1464
BstH2I	RGCGCY	2 cut(s)	12, 1110
BstHHI	GCGC	4 cut(s)	11, 901, 1109, 1391
BstKTI	GATC	4 cut(s)	490, 550, 754, 952
BstMBI	GATC	4 cut(s)	487, 547, 751, 949
BstMWI	GCNNNNNNNGC	6 cut(s)	251, 426, 743, 818, 827, 907
BstNI	CCWGG	3 cut(s)	210, 484, 1435
BstNSI	RCATGY	2 cut(s)	838, 1457
BstSCI	CCNGG	6 cut(s)	115, 208, 482, 609, 1068, 1433
BstSLI	GKGCMC	2 cut(s)	565, 842
BstV1I	GCAGC	3 cut(s)	328, 1234, 1373
BstX2I	RGATCY	1 cut(s)	949
BstXI	CCANNNNNNTGG	1 cut(s)	587
BstYI	RGATCY	1 cut(s)	949
Bsu36I	CCTNAGG	1 cut(s)	1118
BsuRI	GGCC	7 cut(s)	42, 213, 458, 1007, 1073, 1151, 1433
BtgI	CCRYGG	4 cut(s)	471, 1176, 1218, 1428
BtrI	CACGTC	1 cut(s)	1141
BtsCI	GGATG	4 cut(s)	177, 519, 814, 1464
BtsI	GCAGTG	2 cut(s)	741, 915
BtsIMutI	CAGTG	6 cut(s)	297, 565, 741, 755, 915, 1008
BveI	ACCTGC	1 cut(s)	393
Cac8I	GCNNGC	4 cut(s)	137, 577, 832, 1455
CciI	TCATGA	2 cut(s)	1347, 1470
CfoI	GCGC	4 cut(s)	11, 901, 1109, 1391
Cfr13I	GGNCC	2 cut(s)	16, 1071
Csp6I	GTAC	4 cut(s)	91, 447, 538, 729
CspCI	CAANNNNNGTGG	4 cut(s)	730, 765, 1005, 1040
CviQI	GTAC	4 cut(s)	91, 447, 538, 729
DdeI	CTNAG	7 cut(s)	101, 293, 348, 497, 1055, 1118, 1130
DpnI	GATC	4 cut(s)	489, 549, 753, 951
DpnII	GATC	4 cut(s)	487, 547, 751, 949
DraIII	CACNNNGTG	3 cut(s)	205, 560, 1360
EaeI	YGGCCR	1 cut(s)	1149
Eam1104I	CTCTTC	1 cut(s)	917
EarI	CTCTTC	1 cut(s)	917
Ecl136II	GAGCTC	1 cut(s)	352
Eco130I	CCWWGG	4 cut(s)	471, 1205, 1218, 1428
Eco24I	GRGCYC	2 cut(s)	168, 354
Eco47I	GGWCC	1 cut(s)	16
Eco47III	AGCGCT	1 cut(s)	10
Eco53kI	GAGCTC	1 cut(s)	352
Eco57I	CTGAAG	1 cut(s)	663
Eco81I	CCTNAGG	1 cut(s)	1118
Eco88I	CYCGRG	1 cut(s)	986
EcoICRI	GAGCTC	1 cut(s)	352
EcoRI	GAATTC	1 cut(s)	880
EcoRII	CCWGG	3 cut(s)	208, 482, 1433
EcoT14I	CCWWGG	4 cut(s)	471, 1205, 1218, 1428
EcoT22I	ATGCAT	1 cut(s)	1333
EcoT38I	GRGCYC	2 cut(s)	168, 354
ErhI	CCWWGG	4 cut(s)	471, 1205, 1218, 1428
FauNDI	CATATG	2 cut(s)	794, 817
FblI	GTMKAC	1 cut(s)	54
Fnu4HI	GCNGC	5 cut(s)	342, 480, 813, 1248, 1387
FokI	GGATG	4 cut(s)	164, 506, 821, 1451
FriOI	GRGCYC	2 cut(s)	168, 354
Fsp4HI	GCNGC	5 cut(s)	342, 480, 813, 1248, 1387
FspAI	RTGCGCAY	1 cut(s)	900
FspBI	CTAG	4 cut(s)	6, 234, 512, 1206
FspI	TGCGCA	2 cut(s)	900, 1390
GlaI	GCGC	4 cut(s)	10, 900, 1108, 1390
GluI	GCNGC	5 cut(s)	342, 480, 813, 1248, 1387
GsaI	CCCAGC	2 cut(s)	276, 696
GsuI	CTGGAG	1 cut(s)	1337
HaeII	RGCGCY	2 cut(s)	12, 1110
HaeIII	GGCC	7 cut(s)	42, 213, 458, 1007, 1073, 1151, 1433
HapII	CCGG	6 cut(s)	116, 140, 417, 610, 1060, 1069
HhaI	GCGC	4 cut(s)	11, 901, 1109, 1391
Hin6I	GCGC	4 cut(s)	9, 899, 1107, 1389
HinP1I	GCGC	4 cut(s)	9, 899, 1107, 1389
HincII	GTYRAC	4 cut(s)	633, 978, 1114, 1407
HindII	GTYRAC	4 cut(s)	633, 978, 1114, 1407
HindIII	AAGCTT	1 cut(s)	573
HinfI	GANTC	8 cut(s)	143, 173, 303, 318, 656, 761, 1013, 1351
HpaI	GTTAAC	1 cut(s)	1114
HpaII	CCGG	6 cut(s)	116, 140, 417, 610, 1060, 1069
HphI	GGTGA	4 cut(s)	296, 327, 642, 1230
Hpy166II	GTNNAC	8 cut(s)	55, 538, 563, 633, 978, 1030, 1114, 1407
Hpy188I	TCNGA	3 cut(s)	128, 547, 682
Hpy188III	TCNNGA	8 cut(s)	14, 512, 523, 986, 1120, 1348, 1448, 1471
Hpy8I	GTNNAC	8 cut(s)	55, 538, 563, 633, 978, 1030, 1114, 1407
HpyAV	CCTTC	2 cut(s)	1157, 1179
HpyCH4III	ACNGT	4 cut(s)	560, 724, 929, 1242
HpyCH4IV	ACGT	3 cut(s)	309, 1140, 1403
HpyF10VI	GCNNNNNNNGC	6 cut(s)	251, 426, 743, 818, 827, 907
HpyF3I	CTNAG	7 cut(s)	101, 293, 348, 497, 1055, 1118, 1130
HpySE526I	ACGT	3 cut(s)	309, 1140, 1403
HspAI	GCGC	4 cut(s)	9, 899, 1107, 1389
KspAI	GTTAAC	1 cut(s)	1114
Kzo9I	GATC	4 cut(s)	487, 547, 751, 949
LguI	GCTCTTC	1 cut(s)	917
LmnI	GCTCC	2 cut(s)	1134, 1450
Lsp1109I	GCAGC	3 cut(s)	328, 1234, 1373
LweI	GCATC	4 cut(s)	799, 1332, 1340, 1450
MaeI	CTAG	4 cut(s)	6, 234, 512, 1206
MaeII	ACGT	3 cut(s)	309, 1140, 1403
MaeIII	GTNAC	2 cut(s)	1311, 1399
MalI	GATC	4 cut(s)	489, 549, 753, 951
MboI	GATC	4 cut(s)	487, 547, 751, 949
MboII	GAAGA	4 cut(s)	324, 669, 904, 1424
MflI	RGATCY	1 cut(s)	949
MhlI	GDGCHC	4 cut(s)	168, 354, 565, 842
MlsI	TGGCCA	1 cut(s)	1151
MluCI	AATT	9 cut(s)	26, 504, 582, 604, 665, 672, 845, 880, 1257
MluNI	TGGCCA	1 cut(s)	1151
MlyI	GAGTC	4 cut(s)	152, 755, 1007, 1345
MmeI	TCCRAC	1 cut(s)	1345
Mox20I	TGGCCA	1 cut(s)	1151
Mph1103I	ATGCAT	1 cut(s)	1333
MroXI	GAANNNNTTC	1 cut(s)	884
MscI	TGGCCA	1 cut(s)	1151
MseI	TTAA	8 cut(s)	662, 894, 945, 962, 1095, 1113, 1275, 1302
MslI	CAYNNNNRTG	6 cut(s)	365, 807, 1293, 1427, 1458, 1469
Msp20I	TGGCCA	1 cut(s)	1151
MspA1I	CMGCKG	1 cut(s)	341
MspCI	CTTAAG	1 cut(s)	1094
MspI	CCGG	6 cut(s)	116, 140, 417, 610, 1060, 1069
MspR9I	CCNGG	6 cut(s)	117, 210, 484, 611, 1070, 1435
MvaI	CCWGG	3 cut(s)	210, 484, 1435
MwoI	GCNNNNNNNGC	6 cut(s)	251, 426, 743, 818, 827, 907
NciI	CCSGG	3 cut(s)	117, 611, 1070
NcoI	CCATGG	3 cut(s)	471, 1218, 1428
NdeI	CATATG	2 cut(s)	794, 817
NdeII	GATC	4 cut(s)	487, 547, 751, 949
NlaIV	GGNNCC	4 cut(s)	18, 1067, 1136, 1203
NsbI	TGCGCA	2 cut(s)	900, 1390
NsiI	ATGCAT	1 cut(s)	1333
NspI	RCATGY	2 cut(s)	838, 1457
PaeI	GCATGC	1 cut(s)	1457
PagI	TCATGA	2 cut(s)	1347, 1470
PciSI	GCTCTTC	1 cut(s)	917
PdmI	GAANNNNTTC	1 cut(s)	884
PfeI	GAWTC	4 cut(s)	173, 303, 318, 656
PflMI	CCANNNNNTGG	2 cut(s)	49, 1434
PkrI	GCNGC	5 cut(s)	343, 481, 814, 1249, 1388
PleI	GAGTC	4 cut(s)	151, 755, 1007, 1345
PpsI	GAGTC	4 cut(s)	151, 755, 1007, 1345
PshBI	ATTAAT	1 cut(s)	1275
Psp124BI	GAGCTC	1 cut(s)	354
Psp1406I	AACGTT	1 cut(s)	1403
Psp6I	CCWGG	3 cut(s)	208, 482, 1433
PspFI	CCCAGC	2 cut(s)	272, 692
PspGI	CCWGG	3 cut(s)	208, 482, 1433
PspN4I	GGNNCC	4 cut(s)	18, 1067, 1136, 1203
PspPI	GGNCC	2 cut(s)	16, 1071
PsuI	RGATCY	1 cut(s)	949
PvuII	CAGCTG	1 cut(s)	341
RsaI	GTAC	4 cut(s)	92, 448, 539, 730
RsaNI	GTAC	4 cut(s)	91, 447, 538, 729
RseI	CAYNNNNRTG	6 cut(s)	365, 807, 1293, 1427, 1458, 1469
SacI	GAGCTC	1 cut(s)	354
SapI	GCTCTTC	1 cut(s)	917
SaqAI	TTAA	8 cut(s)	662, 894, 945, 962, 1095, 1113, 1275, 1302
SatI	GCNGC	5 cut(s)	342, 480, 813, 1248, 1387
Sau3AI	GATC	4 cut(s)	487, 547, 751, 949
Sau96I	GGNCC	2 cut(s)	16, 1071
ScaI	AGTACT	1 cut(s)	448
SchI	GAGTC	4 cut(s)	152, 755, 1007, 1345
ScrFI	CCNGG	6 cut(s)	117, 210, 484, 611, 1070, 1435
SduI	GDGCHC	4 cut(s)	168, 354, 565, 842
SfaNI	GCATC	4 cut(s)	799, 1332, 1340, 1450
SinI	GGWCC	1 cut(s)	16
SmiMI	CAYNNNNRTG	6 cut(s)	365, 807, 1293, 1427, 1458, 1469
SmlI	CTYRAG	1 cut(s)	1094
SmoI	CTYRAG	1 cut(s)	1094
SphI	GCATGC	1 cut(s)	1457
Sse9I	AATT	9 cut(s)	26, 504, 582, 604, 665, 672, 845, 880, 1257
SsiI	CCGC	4 cut(s)	429, 480, 746, 812
SspI	AATATT	1 cut(s)	785
SspMI	CTAG	4 cut(s)	6, 234, 512, 1206
SstI	GAGCTC	1 cut(s)	354
StyD4I	CCNGG	6 cut(s)	115, 208, 482, 609, 1068, 1433
StyI	CCWWGG	4 cut(s)	471, 1205, 1218, 1428
TaaI	ACNGT	4 cut(s)	560, 724, 929, 1242
TaiI	ACGT	3 cut(s)	312, 1143, 1406
TaqI	TCGA	4 cut(s)	354, 924, 1281, 1306
TasI	AATT	9 cut(s)	26, 504, 582, 604, 665, 672, 845, 880, 1257
TatI	WGTACW	1 cut(s)	446
TauI	GCSGC	2 cut(s)	482, 815
TfiI	GAWTC	4 cut(s)	173, 303, 318, 656
Tru1I	TTAA	8 cut(s)	662, 894, 945, 962, 1095, 1113, 1275, 1302
Tru9I	TTAA	8 cut(s)	662, 894, 945, 962, 1095, 1113, 1275, 1302
TscAI	CASTG	6 cut(s)	304, 565, 748, 762, 922, 1015
TseI	GCWGC	3 cut(s)	341, 1247, 1386
TspDTI	ATGAA	8 cut(s)	49, 791, 847, 873, 960, 1091, 1336, 1487
TspGWI	ACGGA	2 cut(s)	1193, 1424
TspRI	CASTG	6 cut(s)	304, 565, 748, 762, 922, 1015
Van91I	CCANNNNNTGG	2 cut(s)	49, 1434
Vha464I	CTTAAG	1 cut(s)	1094
VneI	GTGCAC	1 cut(s)	561
VpaK11BI	GGWCC	1 cut(s)	16
VspI	ATTAAT	1 cut(s)	1275
XapI	RAATTY	3 cut(s)	26, 845, 880
XbaI	TCTAGA	1 cut(s)	511
XceI	RCATGY	2 cut(s)	838, 1457
XcmI	CCANNNNNNNNNTGG	1 cut(s)	860
XmaJI	CCTAGG	1 cut(s)	1205
XmiI	GTMKAC	1 cut(s)	54
XmnI	GAANNNNTTC	1 cut(s)	884
XspI	CTAG	4 cut(s)	6, 234, 512, 1206
ZrmI	AGTACT	1 cut(s)	448
Zsp2I	ATGCAT	1 cut(s)	1333

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.