Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0001466

Physical Location & Seq

Genomic Coordinates Reverse (-)

11244044 .. 11245579

Gene Structure 1536 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G010220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGGGCAGCCTCCCGTTCCTCCATGATCCACTTGAAAACAGCTCTTCCCACCTGACCAAAGCCCTAGACACTGAAGAGTTCAGGAAACAAGGCCATATGGTCATAGACTTCATTGCAGATTATTACCAAAACATAGAAAAATACCCAGTTCTAAGCCGAGTAGAACCCGGGTATTTGAAAAAATGCCTACCAGAGTCTGCTCCATATAATCCTGAATCGATACAAACCATACTCCAAGATGTTAAAGATCACATTATTCCTGGCCTAACACATTGGCAAAGTCCCAATTTTTTTGCATACTTTTCTTCGACTGCAAGCACTGCTGGGTTTCTTGGCGAAATGCTCATAACTGGGTTCAATGTAGTGGGGTTCAATTGGGTTTCATCGCCGGCTGCAACCGAGCTCGAACACATAGTCATGGATTGGCTCGCAGACATGCTTCAGCTTCCCAAGTCGTTTCATTTCTCTGGTAACGGTGGCGGTGTGTTACATGGGAGTACTTGCGAAGCCATTGTTTGCACAATGGCAGCTGCCAGGGACCAAATGCTAAGCCGAATTGGTAGCGAGAATTTGGGAAAGCTTGTTGTGTATGGTTCAGACCAAACACATTGCACCCTTCAAAAAGCTACCCAAATTGTTGGAATCAACCCGGAGAACTTCAGAGCCATCAAGACTACAAAGTCAACTGGATTTGCACTATCACCTGAAATGCTAAGACTGACAATAAGTTCAGACAGAGCAAAAGGGCTAGTGCCACTTTTTCTATGTGCCACAATGGGCACAACCGCAACCACTGCTATAGATCCATTGGGGGCAGTGTGCAATGTAGCCAAAGATTATGGCATGTGGGTTCATGTGGATGCTGCATATGCAGGAAGTGCTTGCATTTGTCCAGAGTTTCGTCATTTCATTGATGGCGTTGAGGGTGCAGACTCATTTAGTTTCAACCCGCATAAATGGTTATTTACTGCAATGGACTGTTGCTGCCTTTGGGTTAAGAACCCAAGTGCATTAATAAATTCACTGTCGACGAATCCAGAGTATTTGAGGAACAAAGCCAGTGATACAAATGAAGTTGTGGACTACAAAAACTGGCAAATAGCACTAAGCCGGAGGTTCCGGGCATTGAAGCTATGGCTTGTGCTAAGAAGCTACGGCGTGGCTAACCTTAGAAAATTTATTCGAAGCCAAGTCAAAATGGCCAAGATTTTTGAAGGGCTTGTGAGAATGGACAATAGGTTTGAAATTGTGGTTCCTAGAAACTTCTCCTTGGTCTGTTTCAGGATTTCACCATCCGCAATAGTTAGTGATGATCATTATGATGGTGAGGAGTACAATATGGTAAACGAGATCAATTGCAAGTTGCTGGAGGCCATCAATGCATCAGGCGCTGTGTTCATGACTCATGCTGTGGTTGGAGGTGTCTACGTGCTACGGTGCGCAGTTGGTGCAACTCTAACTGAGGAAAAGCACATTCGAGAGGCCTGGAAGGCGGTGCAAGGCCAGGCACATACAATTCTCAGCATGTATTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00350 ko00360 ko00380 ko00901 ko00950 ko00965 ko01100 ko01110 ko04726 ko04728 ko05030 ko05031 ko05034 map00350 map00360 map00380 map00901 map00950 map00965 map01100 map01110 map04726 map04728 map05030 map05031 map05034

Pfam Domains

Protein Families

Pyridoxal_deC

Protein Analysis

511

Amino Acids

56.74

Weight (kDa)

6.35

Isoelectric Point (pI)

40.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pyridoxal_deC	PF00282	56 - 429	2.8e-114	Pyridoxal-dependent decarboxylase conserved domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001466)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g09470 FvH4_3g09472 FvH4_3g09540
malus_domestica	MD01G1040200.v1.1 MD10G1256600.v1.1 MD10G1256900.v1.1
prunus_persica	Prupe.4G087100_v2.0.a1 Prupe.6G202600_v2.0.a1
pyrus_communis	pycom01g06780 pycom10g21240
rosa_chinensis	RchiOBHm_Chr1g0324861 RchiOBHm_Chr5g0015041 RchiOBHm_Chr5g0015051 RchiOBHm_Chr6g0247151
rosa_laevigata	RLG00000030170 RLG00000032163 RLG00000032164 RLG00000032165
rosa_multiflora	Rmu_sc0004577.1_g000016 Rmu_sc0004889.1_g000027 Rmu_sc0009777.1_g000012 Rmu_sc0011258.1_g000012 Rmu_sc0041940.1_g000001
rosa_roxburghii	Rroxscaffold_1G00061480 Rroxscaffold_1G00061490 Rroxscaffold_4G00325150 Rroxscaffold_7G00214310
rosa_rugosa	Rorug01G0048400 Rorug05G0023300 Rorug05G0023600.1 Rorug05G0523300
rosa_samantha	Rh1AG064600 Rh1BG053500 Rh1CG066100 Rh1CG066300 Rh1DG070800 Rh1DG070900 Rh5AG118300 Rh5BG115600 Rh5BG115700 Rh5BG115900 Rh5BG116200 Rh5CG126900 Rh5CG127100 Rh5DG115000 Rh5DG115100 Rh6AG038000 Rh6BG032900
rosa_wichuraiana	Rw1G005430 Rw5G010200 Rw5G010220 Rw6G003240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	679
Acc16I	TGCGCA	1 cut(s)	1441
AccI	GTMKAC	2 cut(s)	1028, 1425
AciI	CCGC	5 cut(s)	480, 786, 950, 1296, 1493
AclWI	GGATC	2 cut(s)	20, 797
AcoI	YGGCCR	1 cut(s)	1200
AcsI	RAATTY	3 cut(s)	568, 1018, 1175
AcuI	CTGAAG	3 cut(s)	93, 425, 643
AfaI	GTAC	2 cut(s)	499, 1334
AgsI	TTSAA	9 cut(s)	35, 178, 358, 373, 620, 946, 1129, 1214, 1244
AjnI	CCWGG	4 cut(s)	259, 533, 1484, 1503
AluBI	AGCT	8 cut(s)	42, 403, 445, 530, 580, 626, 1132, 1152
AluI	AGCT	8 cut(s)	42, 403, 445, 530, 580, 626, 1132, 1152
Alw21I	GWGCWC	1 cut(s)	405
AlwI	GGATC	2 cut(s)	20, 797
AlwNI	CAGNNNCTG	2 cut(s)	197, 1391
Ama87I	CYCGRG	1 cut(s)	167
AoxI	GGCC	6 cut(s)	91, 262, 1200, 1371, 1482, 1501
ApeKI	GCWGC	6 cut(s)	6, 392, 527, 530, 863, 984
ApoI	RAATTY	3 cut(s)	568, 1018, 1175
ArsI	GACNNNNNNTTYG	4 cut(s)	399, 431, 1223, 1255
AseI	ATTAAT	1 cut(s)	1013
AspLEI	GCGC	2 cut(s)	1391, 1442
AspS9I	GGNCC	1 cut(s)	538
AsuC2I	CCSGG	4 cut(s)	168, 169, 650, 1121
AsuHPI	GGTGA	3 cut(s)	693, 1281, 1337
AsuII	TTCGAA	1 cut(s)	1183
AvaI	CYCGRG	1 cut(s)	167
AvaII	GGWCC	1 cut(s)	538
BaeGI	GKGCMC	1 cut(s)	782
BalI	TGGCCA	1 cut(s)	1202
BanII	GRGCYC	1 cut(s)	405
Bbv12I	GWGCWC	1 cut(s)	405
BbvI	GCAGC	6 cut(s)	18, 379, 517, 539, 850, 971
BccI	CCATC	5 cut(s)	674, 908, 1300, 1316, 1382
BceAI	ACGGC	1 cut(s)	1171
BciT130I	CCWGG	4 cut(s)	261, 535, 1486, 1505
BclI	TGATCA	1 cut(s)	1312
BcnI	CCSGG	4 cut(s)	168, 169, 650, 1121
BfaI	CTAG	3 cut(s)	65, 749, 1257
BfmI	CTRYAG	1 cut(s)	798
BfoI	RGCGCY	1 cut(s)	1392
BglI	GCCNNNNNGGC	1 cut(s)	1490
BisI	GCNGC	6 cut(s)	7, 393, 528, 531, 864, 985
BlpI	GCTNAGC	1 cut(s)	548
BlsI	GCNGC	6 cut(s)	8, 394, 529, 532, 865, 986
BmcAI	AGTACT	1 cut(s)	499
Bme1390I	CCNGG	8 cut(s)	168, 169, 261, 535, 650, 1121, 1486, 1505
Bme18I	GGWCC	1 cut(s)	538
BmeT110I	CYCGRG	1 cut(s)	167
BmgT120I	GGNCC	1 cut(s)	538
BmiI	GGNNCC	3 cut(s)	539, 1118, 1254
BmrFI	CCNGG	8 cut(s)	168, 169, 261, 535, 650, 1121, 1486, 1505
BmrI	ACTGGG	2 cut(s)	140, 360
BmsI	GCATC	2 cut(s)	850, 1391
BmuI	ACTGGG	2 cut(s)	140, 360
BpmI	CTGGAG	1 cut(s)	1388
Bpu1102I	GCTNAGC	1 cut(s)	548
Bpu14I	TTCGAA	1 cut(s)	1183
BpuMI	CCSGG	4 cut(s)	168, 169, 650, 1121
Bsa29I	ATCGAT	1 cut(s)	218
BsaAI	YACGTR	1 cut(s)	1429
BsaJI	CCNNGG	3 cut(s)	167, 534, 1269
Bse118I	RCCGGY	1 cut(s)	388
Bse1I	ACTGG	5 cut(s)	146, 355, 691, 1059, 1097
Bse3DI	GCAATG	4 cut(s)	111, 607, 829, 978
BseBI	CCWGG	4 cut(s)	261, 535, 1486, 1505
BseCI	ATCGAT	1 cut(s)	218
BseDI	CCNNGG	3 cut(s)	167, 534, 1269
BseGI	GGATG	2 cut(s)	865, 1292
BseMI	GCAATG	4 cut(s)	111, 607, 829, 978
BseMII	CTCAG	2 cut(s)	1452, 1534
BseNI	ACTGG	5 cut(s)	146, 355, 691, 1059, 1097
BseRI	GAGGAG	1 cut(s)	1343
BseSI	GKGCMC	1 cut(s)	782
BseXI	GCAGC	6 cut(s)	18, 379, 517, 539, 850, 971
BseYI	CCCAGC	1 cut(s)	323
BsgI	GTGCAG	1 cut(s)	948
BshFI	GGCC	6 cut(s)	93, 264, 1202, 1373, 1484, 1503
BshVI	ATCGAT	1 cut(s)	218
BsiHKAI	GWGCWC	1 cut(s)	405
BsiHKCI	CYCGRG	1 cut(s)	167
BsiSI	CCGG	5 cut(s)	168, 389, 650, 1111, 1120
BslFI	GGGAC	2 cut(s)	267, 551
BsmFI	GGGAC	2 cut(s)	267, 551
BsnI	GGCC	6 cut(s)	93, 264, 1202, 1373, 1484, 1503
BsoBI	CYCGRG	1 cut(s)	167
Bsp119I	TTCGAA	1 cut(s)	1183
Bsp1286I	GDGCHC	2 cut(s)	405, 782
Bsp143I	GATC	5 cut(s)	25, 247, 802, 1312, 1350
Bsp1720I	GCTNAGC	1 cut(s)	548
BspACI	CCGC	5 cut(s)	480, 786, 950, 1296, 1493
BspANI	GGCC	6 cut(s)	93, 264, 1202, 1373, 1484, 1503
BspCNI	CTCAG	2 cut(s)	1453, 1533
BspDI	ATCGAT	1 cut(s)	218
BspHI	TCATGA	1 cut(s)	1398
BspLI	GGNNCC	3 cut(s)	539, 1118, 1254
BspPI	GGATC	2 cut(s)	20, 797
BspQI	GCTCTTC	1 cut(s)	49
BspT104I	TTCGAA	1 cut(s)	1183
BsrDI	GCAATG	4 cut(s)	111, 607, 829, 978
BsrFI	RCCGGY	1 cut(s)	388
BsrI	ACTGG	5 cut(s)	146, 355, 691, 1059, 1097
BssAI	RCCGGY	1 cut(s)	388
BssECI	CCNNGG	3 cut(s)	167, 534, 1269
BssMI	GATC	5 cut(s)	25, 247, 802, 1312, 1350
BssT1I	CCWWGG	1 cut(s)	1269
Bst2UI	CCWGG	4 cut(s)	261, 535, 1486, 1505
Bst4CI	ACNGT	4 cut(s)	476, 980, 1026, 1437
Bst6I	CTCTTC	2 cut(s)	49, 69
BstAPI	GCANNNNNTGC	4 cut(s)	320, 794, 878, 1448
BstBAI	YACGTR	1 cut(s)	1429
BstBI	TTCGAA	1 cut(s)	1183
BstC8I	GCNNGC	4 cut(s)	316, 390, 429, 883
BstDEI	CTNAG	8 cut(s)	152, 548, 713, 1106, 1145, 1169, 1461, 1520
BstF5I	GGATG	2 cut(s)	865, 1292
BstH2I	RGCGCY	1 cut(s)	1392
BstHHI	GCGC	2 cut(s)	1391, 1442
BstKTI	GATC	5 cut(s)	28, 250, 805, 1315, 1353
BstMBI	GATC	5 cut(s)	25, 247, 802, 1312, 1350
BstMWI	GCNNNNNNNGC	8 cut(s)	320, 794, 869, 878, 1379, 1388, 1448, 1490
BstNI	CCWGG	4 cut(s)	261, 535, 1486, 1505
BstNSI	RCATGY	3 cut(s)	439, 847, 1528
BstSCI	CCNGG	8 cut(s)	166, 167, 259, 533, 648, 1119, 1484, 1503
BstSFI	CTRYAG	1 cut(s)	798
BstSLI	GKGCMC	1 cut(s)	782
BstV1I	GCAGC	6 cut(s)	18, 379, 517, 539, 850, 971
BstX2I	RGATCY	1 cut(s)	802
BstXI	CCANNNNNNTGG	1 cut(s)	638
BstYI	RGATCY	1 cut(s)	802
Bsu15I	ATCGAT	1 cut(s)	218
BsuRI	GGCC	6 cut(s)	93, 264, 1202, 1373, 1484, 1503
BsuTUI	ATCGAT	1 cut(s)	218
BtgZI	GCGATG	1 cut(s)	369
BtsCI	GGATG	2 cut(s)	865, 1292
BtsI	GCAGTG	3 cut(s)	318, 792, 822
BtsIMutI	CAGTG	6 cut(s)	69, 318, 792, 822, 1022, 1066
Cac8I	GCNNGC	4 cut(s)	316, 390, 429, 883
CaiI	CAGNNNCTG	2 cut(s)	197, 1391
CciI	TCATGA	1 cut(s)	1398
CfoI	GCGC	2 cut(s)	1391, 1442
Cfr10I	RCCGGY	1 cut(s)	388
Cfr13I	GGNCC	1 cut(s)	538
Cfr9I	CCCGGG	1 cut(s)	167
ClaI	ATCGAT	1 cut(s)	218
Csp6I	GTAC	2 cut(s)	498, 1333
CviAII	CATG	9 cut(s)	23, 418, 436, 491, 844, 854, 1399, 1406, 1525
CviQI	GTAC	2 cut(s)	498, 1333
DdeI	CTNAG	8 cut(s)	152, 548, 713, 1106, 1145, 1169, 1461, 1520
DpnI	GATC	5 cut(s)	27, 249, 804, 1314, 1352
DpnII	GATC	5 cut(s)	25, 247, 802, 1312, 1350
DrdI	GACNNNNNNGTC	1 cut(s)	679
DseDI	GACNNNNNNGTC	1 cut(s)	679
EaeI	YGGCCR	1 cut(s)	1200
Eam1104I	CTCTTC	2 cut(s)	49, 69
EarI	CTCTTC	2 cut(s)	49, 69
Ecl136II	GAGCTC	1 cut(s)	403
Eco130I	CCWWGG	1 cut(s)	1269
Eco147I	AGGCCT	1 cut(s)	1484
Eco24I	GRGCYC	1 cut(s)	405
Eco47I	GGWCC	1 cut(s)	538
Eco53kI	GAGCTC	1 cut(s)	403
Eco57I	CTGAAG	3 cut(s)	93, 425, 643
Eco88I	CYCGRG	1 cut(s)	167
EcoICRI	GAGCTC	1 cut(s)	403
EcoRII	CCWGG	4 cut(s)	259, 533, 1484, 1503
EcoT14I	CCWWGG	1 cut(s)	1269
EcoT22I	ATGCAT	1 cut(s)	1384
EcoT38I	GRGCYC	1 cut(s)	405
ErhI	CCWWGG	1 cut(s)	1269
FaeI	CATG	9 cut(s)	26, 421, 439, 494, 847, 857, 1402, 1409, 1528
FaqI	GGGAC	2 cut(s)	267, 551
FatI	CATG	9 cut(s)	22, 417, 435, 490, 843, 853, 1398, 1405, 1524
FauI	CCCGC	1 cut(s)	957
FauNDI	CATATG	2 cut(s)	96, 868
FbaI	TGATCA	1 cut(s)	1312
FblI	GTMKAC	2 cut(s)	1028, 1425
Fnu4HI	GCNGC	6 cut(s)	7, 393, 528, 531, 864, 985
FokI	GGATG	2 cut(s)	872, 1279
FriOI	GRGCYC	1 cut(s)	405
Fsp4HI	GCNGC	6 cut(s)	7, 393, 528, 531, 864, 985
FspBI	CTAG	3 cut(s)	65, 749, 1257
FspI	TGCGCA	1 cut(s)	1441
GlaI	GCGC	2 cut(s)	1390, 1441
GluI	GCNGC	6 cut(s)	7, 393, 528, 531, 864, 985
GsaI	CCCAGC	1 cut(s)	327
GsuI	CTGGAG	1 cut(s)	1388
HaeII	RGCGCY	1 cut(s)	1392
HaeIII	GGCC	6 cut(s)	93, 264, 1202, 1373, 1484, 1503
HapII	CCGG	5 cut(s)	168, 389, 650, 1111, 1120
HhaI	GCGC	2 cut(s)	1391, 1442
Hin1II	CATG	9 cut(s)	26, 421, 439, 494, 847, 857, 1402, 1409, 1528
Hin6I	GCGC	2 cut(s)	1389, 1440
HinP1I	GCGC	2 cut(s)	1389, 1440
HincII	GTYRAC	2 cut(s)	684, 1029
HindII	GTYRAC	2 cut(s)	684, 1029
HindIII	AAGCTT	1 cut(s)	578
HinfI	GANTC	6 cut(s)	194, 215, 642, 932, 1033, 1402
HpaII	CCGG	5 cut(s)	168, 389, 650, 1111, 1120
HphI	GGTGA	3 cut(s)	693, 1281, 1337
Hpy166II	GTNNAC	5 cut(s)	684, 1029, 1081, 1345, 1426
Hpy188I	TCNGA	3 cut(s)	598, 662, 733
Hpy188III	TCNNGA	8 cut(s)	82, 212, 670, 893, 1037, 1282, 1399, 1478
Hpy8I	GTNNAC	5 cut(s)	684, 1029, 1081, 1345, 1426
Hpy99I	CGWCG	1 cut(s)	1033
HpyAV	CCTTC	3 cut(s)	626, 1208, 1483
HpyCH4III	ACNGT	4 cut(s)	476, 980, 1026, 1437
HpyCH4IV	ACGT	1 cut(s)	1428
HpyF10VI	GCNNNNNNNGC	8 cut(s)	320, 794, 869, 878, 1379, 1388, 1448, 1490
HpyF3I	CTNAG	8 cut(s)	152, 548, 713, 1106, 1145, 1169, 1461, 1520
HpySE526I	ACGT	1 cut(s)	1428
Hsp92II	CATG	9 cut(s)	26, 421, 439, 494, 847, 857, 1402, 1409, 1528
HspAI	GCGC	2 cut(s)	1389, 1440
KroI	GCCGGC	1 cut(s)	388
KroNI	GCCGGC	1 cut(s)	390
Ksp22I	TGATCA	1 cut(s)	1312
Kzo9I	GATC	5 cut(s)	25, 247, 802, 1312, 1350
LguI	GCTCTTC	1 cut(s)	49
LmnI	GCTCC	1 cut(s)	205
Lsp1109I	GCAGC	6 cut(s)	18, 379, 517, 539, 850, 971
LweI	GCATC	2 cut(s)	850, 1391
MaeI	CTAG	3 cut(s)	65, 749, 1257
MaeII	ACGT	1 cut(s)	1428
MaeIII	GTNAC	2 cut(s)	470, 486
MalI	GATC	5 cut(s)	27, 249, 804, 1314, 1352
MboI	GATC	5 cut(s)	25, 247, 802, 1312, 1350
MboII	GAAGA	3 cut(s)	36, 86, 297
MfeI	CAATTG	2 cut(s)	373, 1354
MflI	RGATCY	1 cut(s)	802
MhlI	GDGCHC	2 cut(s)	405, 782
MlsI	TGGCCA	1 cut(s)	1202
MluNI	TGGCCA	1 cut(s)	1202
MlyI	GAGTC	3 cut(s)	203, 926, 1396
MmeI	TCCRAC	2 cut(s)	619, 1396
Mox20I	TGGCCA	1 cut(s)	1202
Mph1103I	ATGCAT	1 cut(s)	1384
MroNI	GCCGGC	1 cut(s)	388
MscI	TGGCCA	1 cut(s)	1202
MseI	TTAA	3 cut(s)	243, 996, 1013
MslI	CAYNNNNRTG	3 cut(s)	416, 858, 1320
Msp20I	TGGCCA	1 cut(s)	1202
MspA1I	CMGCKG	1 cut(s)	530
MspI	CCGG	5 cut(s)	168, 389, 650, 1111, 1120
MspR9I	CCNGG	8 cut(s)	168, 169, 261, 535, 650, 1121, 1486, 1505
MunI	CAATTG	2 cut(s)	373, 1354
MvaI	CCWGG	4 cut(s)	261, 535, 1486, 1505
MwoI	GCNNNNNNNGC	8 cut(s)	320, 794, 869, 878, 1379, 1388, 1448, 1490
NaeI	GCCGGC	1 cut(s)	390
NciI	CCSGG	4 cut(s)	168, 169, 650, 1121
NdeI	CATATG	2 cut(s)	96, 868
NdeII	GATC	5 cut(s)	25, 247, 802, 1312, 1350
NgoMIV	GCCGGC	1 cut(s)	388
NlaIII	CATG	9 cut(s)	26, 421, 439, 494, 847, 857, 1402, 1409, 1528
NlaIV	GGNNCC	3 cut(s)	539, 1118, 1254
NmeAIII	GCCGAG	1 cut(s)	182
NsbI	TGCGCA	1 cut(s)	1441
NsiI	ATGCAT	1 cut(s)	1384
NspI	RCATGY	3 cut(s)	439, 847, 1528
NspV	TTCGAA	1 cut(s)	1183
PagI	TCATGA	1 cut(s)	1398
PceI	AGGCCT	1 cut(s)	1484
PciSI	GCTCTTC	1 cut(s)	49
PdiI	GCCGGC	1 cut(s)	390
PfeI	GAWTC	3 cut(s)	215, 642, 1033
PkrI	GCNGC	6 cut(s)	8, 394, 529, 532, 865, 986
PleI	GAGTC	3 cut(s)	202, 926, 1396
PpsI	GAGTC	3 cut(s)	202, 926, 1396
Ppu21I	YACGTR	1 cut(s)	1429
PshBI	ATTAAT	1 cut(s)	1013
Psp124BI	GAGCTC	1 cut(s)	405
Psp6I	CCWGG	4 cut(s)	259, 533, 1484, 1503
PspFI	CCCAGC	1 cut(s)	323
PspGI	CCWGG	4 cut(s)	259, 533, 1484, 1503
PspN4I	GGNNCC	3 cut(s)	539, 1118, 1254
PspPI	GGNCC	1 cut(s)	538
PstNI	CAGNNNCTG	2 cut(s)	197, 1391
PsuI	RGATCY	1 cut(s)	802
PvuII	CAGCTG	1 cut(s)	530
RsaI	GTAC	2 cut(s)	499, 1334
RsaNI	GTAC	2 cut(s)	498, 1333
RseI	CAYNNNNRTG	3 cut(s)	416, 858, 1320
SacI	GAGCTC	1 cut(s)	405
SalI	GTCGAC	1 cut(s)	1027
SapI	GCTCTTC	1 cut(s)	49
SaqAI	TTAA	3 cut(s)	243, 996, 1013
SatI	GCNGC	6 cut(s)	7, 393, 528, 531, 864, 985
Sau3AI	GATC	5 cut(s)	25, 247, 802, 1312, 1350
Sau96I	GGNCC	1 cut(s)	538
ScaI	AGTACT	1 cut(s)	499
SchI	GAGTC	3 cut(s)	203, 926, 1396
ScrFI	CCNGG	8 cut(s)	168, 169, 261, 535, 650, 1121, 1486, 1505
SduI	GDGCHC	2 cut(s)	405, 782
SfaNI	GCATC	2 cut(s)	850, 1391
SfcI	CTRYAG	1 cut(s)	798
SfuI	TTCGAA	1 cut(s)	1183
SinI	GGWCC	1 cut(s)	538
SmaI	CCCGGG	1 cut(s)	169
SmiMI	CAYNNNNRTG	3 cut(s)	416, 858, 1320
SseBI	AGGCCT	1 cut(s)	1484
SsiI	CCGC	5 cut(s)	480, 786, 950, 1296, 1493
SspMI	CTAG	3 cut(s)	65, 749, 1257
SstI	GAGCTC	1 cut(s)	405
StuI	AGGCCT	1 cut(s)	1484
StyD4I	CCNGG	8 cut(s)	166, 167, 259, 533, 648, 1119, 1484, 1503
StyI	CCWWGG	1 cut(s)	1269
TaaI	ACNGT	4 cut(s)	476, 980, 1026, 1437
TaiI	ACGT	1 cut(s)	1431
TaqI	TCGA	6 cut(s)	218, 308, 405, 1028, 1183, 1477
TatI	WGTACW	2 cut(s)	497, 1332
TfiI	GAWTC	3 cut(s)	215, 642, 1033
Tru1I	TTAA	3 cut(s)	243, 996, 1013
Tru9I	TTAA	3 cut(s)	243, 996, 1013
TscAI	CASTG	6 cut(s)	76, 325, 799, 822, 1029, 1066
TseI	GCWGC	6 cut(s)	6, 392, 527, 530, 863, 984
TspDTI	ATGAA	7 cut(s)	100, 372, 449, 842, 898, 1086, 1387
TspMI	CCCGGG	1 cut(s)	167
TspRI	CASTG	6 cut(s)	76, 325, 799, 822, 1029, 1066
VpaK11BI	GGWCC	1 cut(s)	538
VspI	ATTAAT	1 cut(s)	1013
XapI	RAATTY	3 cut(s)	568, 1018, 1175
XceI	RCATGY	3 cut(s)	439, 847, 1528
XmaI	CCCGGG	1 cut(s)	167
XmiI	GTMKAC	2 cut(s)	1028, 1425
XspI	CTAG	3 cut(s)	65, 749, 1257
ZrmI	AGTACT	1 cut(s)	499
Zsp2I	ATGCAT	1 cut(s)	1384

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.