Rmu_sc0011258.1_g000012

Tyrosine dopa decarboxylase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011258.1
Physical Location & Seq
Forward (+)
68981 .. 70795
1815 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011258.1_g000012.1.cds

Sequence Viewer

Length: 1815 bp
atgggtagccgtagcctaccattccaccatgattcacatgaaaccacctctgcccccatcaccaaatccctagaccctgaagaattgaggaaatacggccacatggtcgtagacttcatcgcagattattaccaaaacatagagaaatacccagttctaagccgagtgcaacctggttatttgagaaactgcctaccagcttctgccccatatgaccctgaacccatatcaaccatccttaaagatgttcaggatcacattgttcctggcttaacacattggcaaagtccaaatttctttgcatacttctcttcaactgctagcactgcagggtttctcggtgaaatgctcaccactggacttaatgtggtggggttcaactgggtttcatcaccagcagcaaccgagctcgaaaacatagtcatggattggttggcagacatgcttcagcttcccaagtctttccatttctctggcaacggaggcggtgtgttacatgggagtacttgcgaggccattgtttgcacaatggcagctgccagagaccaaatgctaagccgaattggtagcgagaatttgggaaatcttgttgtgtatggttcagaccaaacacatagcacacttcagaaagcttcccaaattcttggaatcaacatggagaacttccgggccatcaagactacaaagtcaactgaatttgcactatcacctgagatgctaagattgacaataagttcagacctagaagaagggctagtgccactctttgtatgtgccacaataggcacaaccgcaaccactgctattgatccattggaggcactatgtcatgtagcaaaagaatacggcgtgtgggttcatgtggatggtgcatatgctggaagtgcatgcatttgtccagagtttcgacatttcatcgatggcgtagagggctcaaactcttttagttttaacccccataaatggttattcactggaatggattgctgctgcctttgggttaagaatccgagtgcattggtactttcattgtcaacgaatccagagtttttgaggaacacagccagtgactcaaagcaagttgtggactacaaagactggcaaatagcactgagccggaggttccgagcattgaggctatggcttgttctaagaagctacggcgtggctaaccttagaaactttattcgttgccatgtcaaaatggccaagactgcaaactcttttagttttaacccccataaatggttattcactggaatggattgctgctgcctttgggttaagaatccgagtgcattggcactttcattgtcaacgaatccagagtttttgaggaacacagccagtgactcaaagcaagttgtggactacaaagactggcaaatagcactgagccggaggttccgagcattgaggctatggcttgttctaagaagctacggcgtggctaaccttagaaactttattcgttgccatgtcaaaatggccaagacttttgaagggcttgtgagaatggacaagaggtttgagattgtggtgcctagagacttctcattggtctgctttagaatttcaccatcggcattgatcagtagggatgaggatggtgagatcggtatgataaacgaggtcaactgcaagctgctagatgccatcaacgcatcaggtaaagcatacatgacccatgctgtggttggaggtatctttctgctgcggtgcgccattggtgctactctgacagaagaaaagcacatagtccaggcttggaaggtggtgcgaaaccatgcacaagccatcctcaatatgcattga

Protein Analysis

604

Amino Acids

67.46

Weight (kDa)

7.83

Isoelectric Point (pI)

48.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 685
AccB1I GGYRCC 1 cut(s) 1540
AccB7I CCANNNNNTGG 1 cut(s) 1693
AccI GTMKAC 1 cut(s) 111
AciI CCGC 3 cut(s) 486, 792, 1717
AclWI GGATC 2 cut(s) 261, 803
AcoI YGGCCR 3 cut(s) 97, 1206, 1488
AcsI RAATTY 5 cut(s) 292, 574, 639, 695, 1572
AcuI CTGAAG 3 cut(s) 99, 431, 608
AfaI GTAC 2 cut(s) 505, 1023
AfiI CCNNNNNNNGG 3 cut(s) 963, 1245, 1693
AgsI TTSAA 3 cut(s) 315, 379, 1502
AjnI CCWGG 3 cut(s) 172, 265, 1761
AluBI AGCT 8 cut(s) 200, 409, 451, 536, 632, 1158, 1440, 1645
AluI AGCT 8 cut(s) 200, 409, 451, 536, 632, 1158, 1440, 1645
Alw21I GWGCWC 1 cut(s) 411
Alw26I GTCTC 2 cut(s) 537, 1542
AlwI GGATC 2 cut(s) 261, 803
AlwNI CAGNNNCTG 1 cut(s) 203
AoxI GGCC 5 cut(s) 97, 513, 669, 1206, 1488
ApeKI GCWGC 9 cut(s) 398, 533, 536, 987, 990, 1269, 1272, 1645, 1714
ApoI RAATTY 5 cut(s) 292, 574, 639, 695, 1572
ArsI GACNNNNNNTTYG 4 cut(s) 405, 437, 1511, 1543
AspLEI GCGC 1 cut(s) 1724
AspS9I GGNCC 1 cut(s) 669
AsuC2I CCSGG 1 cut(s) 668
AsuHPI GGTGA 7 cut(s) 52, 343, 353, 384, 699, 1569, 1622
AsuNHI GCTAGC 1 cut(s) 320
BalI TGGCCA 2 cut(s) 1208, 1490
BanI GGYRCC 1 cut(s) 1540
BanII GRGCYC 2 cut(s) 411, 935
Bbv12I GWGCWC 1 cut(s) 411
BbvI GCAGC 9 cut(s) 410, 523, 545, 974, 977, 1256, 1259, 1632, 1701
BccI CCATC 9 cut(s) 65, 242, 680, 860, 914, 1588, 1601, 1664, 1805
BceAI ACGGC 4 cut(s) 112, 862, 1177, 1459
BciT130I CCWGG 3 cut(s) 174, 267, 1763
BclI TGATCA 1 cut(s) 1590
BcnI CCSGG 1 cut(s) 668
BcoDI GTCTC 2 cut(s) 537, 1542
BfaI CTAG 6 cut(s) 71, 321, 743, 755, 1545, 1649
BfmI CTRYAG 1 cut(s) 327
BisI GCNGC 9 cut(s) 399, 534, 537, 988, 991, 1270, 1273, 1646, 1715
BlpI GCTNAGC 1 cut(s) 554
BlsI GCNGC 9 cut(s) 400, 535, 538, 989, 992, 1271, 1274, 1647, 1716
BmcAI AGTACT 1 cut(s) 505
Bme1390I CCNGG 4 cut(s) 174, 267, 668, 1763
BmgT120I GGNCC 1 cut(s) 669
BmiI GGNNCC 3 cut(s) 1124, 1406, 1542
BmrFI CCNGG 4 cut(s) 174, 267, 668, 1763
BmrI ACTGGG 2 cut(s) 146, 391
BmsI GCATC 3 cut(s) 705, 1642, 1673
BmtI GCTAGC 1 cut(s) 324
BmuI ACTGGG 2 cut(s) 146, 391
Bpu1102I GCTNAGC 1 cut(s) 554
BpuMI CCSGG 1 cut(s) 668
Bsa29I ATCGAT 1 cut(s) 918
BsaI GGTCTC 1 cut(s) 537
BsaXI ACNNNNNCTCC 2 cut(s) 474, 504
Bsc4I CCNNNNNNNGG 3 cut(s) 963, 1245, 1693
Bse1I ACTGG 9 cut(s) 152, 361, 386, 979, 1065, 1103, 1261, 1347, 1385
BseBI CCWGG 3 cut(s) 174, 267, 1763
BseCI ATCGAT 1 cut(s) 918
BseGI GGATG 5 cut(s) 234, 871, 1606, 1612, 1797
BseLI CCNNNNNNNGG 3 cut(s) 963, 1245, 1693
BseMII CTCAG 3 cut(s) 702, 1103, 1385
BseNI ACTGG 9 cut(s) 152, 361, 386, 979, 1065, 1103, 1261, 1347, 1385
BseXI GCAGC 9 cut(s) 410, 523, 545, 974, 977, 1256, 1259, 1632, 1701
BshFI GGCC 5 cut(s) 99, 515, 671, 1208, 1490
BshNI GGYRCC 1 cut(s) 1540
BshVI ATCGAT 1 cut(s) 918
BsiHKAI GWGCWC 1 cut(s) 411
BsiSI CCGG 3 cut(s) 667, 1117, 1399
BslI CCNNNNNNNGG 3 cut(s) 963, 1245, 1693
BsmAI GTCTC 2 cut(s) 537, 1542
BsnI GGCC 5 cut(s) 99, 515, 671, 1208, 1490
Bso31I GGTCTC 1 cut(s) 537
Bsp1286I GDGCHC 2 cut(s) 411, 935
Bsp143I GATC 4 cut(s) 253, 808, 1590, 1614
Bsp1720I GCTNAGC 1 cut(s) 554
BspACI CCGC 3 cut(s) 486, 792, 1717
BspANI GGCC 5 cut(s) 99, 515, 671, 1208, 1490
BspCNI CTCAG 3 cut(s) 703, 1104, 1386
BspDI ATCGAT 1 cut(s) 918
BspLI GGNNCC 3 cut(s) 1124, 1406, 1542
BspMAI CTGCAG 1 cut(s) 331
BspOI GCTAGC 1 cut(s) 324
BspPI GGATC 2 cut(s) 261, 803
BspT107I GGYRCC 1 cut(s) 1540
BspTNI GGTCTC 1 cut(s) 537
BsrI ACTGG 9 cut(s) 152, 361, 386, 979, 1065, 1103, 1261, 1347, 1385
BssMI GATC 4 cut(s) 253, 808, 1590, 1614
Bst2UI CCWGG 3 cut(s) 174, 267, 1763
Bst6I CTCTTC 1 cut(s) 316
BstAPI GCANNNNNTGC 1 cut(s) 800
BstC8I GCNNGC 3 cut(s) 322, 889, 1643
BstF5I GGATG 5 cut(s) 234, 871, 1606, 1612, 1797
BstHHI GCGC 1 cut(s) 1724
BstKTI GATC 4 cut(s) 256, 811, 1593, 1617
BstMAI GTCTC 2 cut(s) 537, 1542
BstMBI GATC 4 cut(s) 253, 808, 1590, 1614
BstMWI GCNNNNNNNGC 8 cut(s) 326, 483, 800, 884, 930, 1214, 1661, 1730
BstNI CCWGG 3 cut(s) 174, 267, 1763
BstNSI RCATGY 2 cut(s) 445, 891
BstSCI CCNGG 4 cut(s) 172, 265, 666, 1761
BstSFI CTRYAG 1 cut(s) 327
BstV1I GCAGC 9 cut(s) 410, 523, 545, 974, 977, 1256, 1259, 1632, 1701
BstXI CCANNNNNNTGG 2 cut(s) 473, 644
Bsu15I ATCGAT 1 cut(s) 918
BsuRI GGCC 5 cut(s) 99, 515, 671, 1208, 1490
BsuTUI ATCGAT 1 cut(s) 918
BtgZI GCGATG 1 cut(s) 103
BtsCI GGATG 5 cut(s) 234, 871, 1606, 1612, 1797
BtsI GCAGTG 2 cut(s) 324, 798
BtsIMutI CAGTG 9 cut(s) 324, 354, 798, 972, 1072, 1109, 1254, 1354, 1391
Cac8I GCNNGC 3 cut(s) 322, 889, 1643
CaiI CAGNNNCTG 1 cut(s) 203
CfoI GCGC 1 cut(s) 1724
Cfr13I GGNCC 1 cut(s) 669
ClaI ATCGAT 1 cut(s) 918
CsiI ACCWGGT 1 cut(s) 172
Csp6I GTAC 2 cut(s) 504, 1022
CspCI CAANNNNNGTGG 2 cut(s) 787, 822
CviQI GTAC 2 cut(s) 504, 1022
DpnI GATC 4 cut(s) 255, 810, 1592, 1616
DpnII GATC 4 cut(s) 253, 808, 1590, 1614
DrdI GACNNNNNNGTC 1 cut(s) 685
DseDI GACNNNNNNGTC 1 cut(s) 685
EaeI YGGCCR 3 cut(s) 97, 1206, 1488
Eam1104I CTCTTC 1 cut(s) 316
EarI CTCTTC 1 cut(s) 316
Ecl136II GAGCTC 1 cut(s) 409
Eco24I GRGCYC 2 cut(s) 411, 935
Eco31I GGTCTC 1 cut(s) 537
Eco53kI GAGCTC 1 cut(s) 409
Eco57I CTGAAG 3 cut(s) 99, 431, 608
EcoICRI GAGCTC 1 cut(s) 409
EcoRII CCWGG 3 cut(s) 172, 265, 1761
EcoT22I ATGCAT 2 cut(s) 893, 1812
EcoT38I GRGCYC 2 cut(s) 411, 935
FauNDI CATATG 2 cut(s) 211, 874
FbaI TGATCA 1 cut(s) 1590
FblI GTMKAC 1 cut(s) 111
Fnu4HI GCNGC 9 cut(s) 399, 534, 537, 988, 991, 1270, 1273, 1646, 1715
FokI GGATG 5 cut(s) 221, 878, 1613, 1619, 1784
FriOI GRGCYC 2 cut(s) 411, 935
Fsp4HI GCNGC 9 cut(s) 399, 534, 537, 988, 991, 1270, 1273, 1646, 1715
FspBI CTAG 6 cut(s) 71, 321, 743, 755, 1545, 1649
GlaI GCGC 1 cut(s) 1723
GluI GCNGC 9 cut(s) 399, 534, 537, 988, 991, 1270, 1273, 1646, 1715
HaeIII GGCC 5 cut(s) 99, 515, 671, 1208, 1490
HapII CCGG 3 cut(s) 667, 1117, 1399
HhaI GCGC 1 cut(s) 1724
Hin6I GCGC 1 cut(s) 1722
HinP1I GCGC 1 cut(s) 1722
HincII GTYRAC 4 cut(s) 690, 1035, 1317, 1636
HindII GTYRAC 4 cut(s) 690, 1035, 1317, 1636
HindIII AAGCTT 1 cut(s) 630
HinfI GANTC 8 cut(s) 32, 648, 1006, 1039, 1070, 1288, 1321, 1352
HpaII CCGG 3 cut(s) 667, 1117, 1399
HphI GGTGA 7 cut(s) 52, 343, 353, 384, 699, 1569, 1622
Hpy166II GTNNAC 7 cut(s) 112, 690, 1035, 1087, 1317, 1369, 1636
Hpy188I TCNGA 8 cut(s) 604, 627, 739, 1011, 1127, 1293, 1409, 1740
Hpy188III TCNNGA 5 cut(s) 251, 676, 899, 1043, 1325
Hpy8I GTNNAC 7 cut(s) 112, 690, 1035, 1087, 1317, 1369, 1636
HpyAV CCTTC 3 cut(s) 743, 1496, 1765
HpyF10VI GCNNNNNNNGC 8 cut(s) 326, 483, 800, 884, 930, 1214, 1661, 1730
HspAI GCGC 1 cut(s) 1722
Ksp22I TGATCA 1 cut(s) 1590
Kzo9I GATC 4 cut(s) 253, 808, 1590, 1614
Lsp1109I GCAGC 9 cut(s) 410, 523, 545, 974, 977, 1256, 1259, 1632, 1701
LweI GCATC 3 cut(s) 705, 1642, 1673
MabI ACCWGGT 1 cut(s) 172
MaeI CTAG 6 cut(s) 71, 321, 743, 755, 1545, 1649
MaeIII GTNAC 3 cut(s) 492, 1067, 1349
MalI GATC 4 cut(s) 255, 810, 1592, 1616
MboI GATC 4 cut(s) 253, 808, 1590, 1614
MboII GAAGA 4 cut(s) 92, 303, 758, 1757
MhlI GDGCHC 2 cut(s) 411, 935
MlsI TGGCCA 2 cut(s) 1208, 1490
MluCI AATT 7 cut(s) 83, 292, 561, 574, 639, 695, 1572
MluNI TGGCCA 2 cut(s) 1208, 1490
MlyI GAGTC 2 cut(s) 1064, 1346
MmeI TCCRAC 1 cut(s) 1678
Mox20I TGGCCA 2 cut(s) 1208, 1490
Mph1103I ATGCAT 2 cut(s) 893, 1812
MscI TGGCCA 2 cut(s) 1208, 1490
MseI TTAA 7 cut(s) 240, 272, 363, 951, 1002, 1233, 1284
MslI CAYNNNNRTG 4 cut(s) 422, 864, 977, 1259
Msp20I TGGCCA 2 cut(s) 1208, 1490
MspA1I CMGCKG 1 cut(s) 536
MspI CCGG 3 cut(s) 667, 1117, 1399
MspR9I CCNGG 4 cut(s) 174, 267, 668, 1763
MvaI CCWGG 3 cut(s) 174, 267, 1763
MwoI GCNNNNNNNGC 8 cut(s) 326, 483, 800, 884, 930, 1214, 1661, 1730
NciI CCSGG 1 cut(s) 668
NdeI CATATG 2 cut(s) 211, 874
NdeII GATC 4 cut(s) 253, 808, 1590, 1614
NheI GCTAGC 1 cut(s) 320
NlaIV GGNNCC 3 cut(s) 1124, 1406, 1542
NmeAIII GCCGAG 1 cut(s) 188
NmuCI GTSAC 2 cut(s) 1067, 1349
NsiI ATGCAT 2 cut(s) 893, 1812
NspI RCATGY 2 cut(s) 445, 891
PaeI GCATGC 1 cut(s) 891
PfeI GAWTC 6 cut(s) 32, 648, 1006, 1039, 1288, 1321
PflMI CCANNNNNTGG 1 cut(s) 1693
PkrI GCNGC 9 cut(s) 400, 535, 538, 989, 992, 1271, 1274, 1647, 1716
PleI GAGTC 2 cut(s) 1064, 1346
PpsI GAGTC 2 cut(s) 1064, 1346
Psp124BI GAGCTC 1 cut(s) 411
Psp6I CCWGG 3 cut(s) 172, 265, 1761
PspGI CCWGG 3 cut(s) 172, 265, 1761
PspN4I GGNNCC 3 cut(s) 1124, 1406, 1542
PspPI GGNCC 1 cut(s) 669
PstI CTGCAG 1 cut(s) 331
PstNI CAGNNNCTG 1 cut(s) 203
PvuII CAGCTG 1 cut(s) 536
RsaI GTAC 2 cut(s) 505, 1023
RsaNI GTAC 2 cut(s) 504, 1022
RseI CAYNNNNRTG 4 cut(s) 422, 864, 977, 1259
SacI GAGCTC 1 cut(s) 411
SaqAI TTAA 7 cut(s) 240, 272, 363, 951, 1002, 1233, 1284
SatI GCNGC 9 cut(s) 399, 534, 537, 988, 991, 1270, 1273, 1646, 1715
Sau3AI GATC 4 cut(s) 253, 808, 1590, 1614
Sau96I GGNCC 1 cut(s) 669
ScaI AGTACT 1 cut(s) 505
SchI GAGTC 2 cut(s) 1064, 1346
ScrFI CCNGG 4 cut(s) 174, 267, 668, 1763
SduI GDGCHC 2 cut(s) 411, 935
SexAI ACCWGGT 1 cut(s) 172
SfaNI GCATC 3 cut(s) 705, 1642, 1673
SfcI CTRYAG 1 cut(s) 327
SmiMI CAYNNNNRTG 4 cut(s) 422, 864, 977, 1259
SphI GCATGC 1 cut(s) 891
Sse9I AATT 7 cut(s) 83, 292, 561, 574, 639, 695, 1572
SsiI CCGC 3 cut(s) 486, 792, 1717
SspMI CTAG 6 cut(s) 71, 321, 743, 755, 1545, 1649
SstI GAGCTC 1 cut(s) 411
StyD4I CCNGG 4 cut(s) 172, 265, 666, 1761
TaqI TCGA 3 cut(s) 411, 907, 918
TasI AATT 7 cut(s) 83, 292, 561, 574, 639, 695, 1572
TatI WGTACW 1 cut(s) 503
TfiI GAWTC 6 cut(s) 32, 648, 1006, 1039, 1288, 1321
Tru1I TTAA 7 cut(s) 240, 272, 363, 951, 1002, 1233, 1284
Tru9I TTAA 7 cut(s) 240, 272, 363, 951, 1002, 1233, 1284
TscAI CASTG 9 cut(s) 331, 361, 805, 979, 1072, 1116, 1261, 1354, 1398
TseFI GTSAC 2 cut(s) 1067, 1349
TseI GCWGC 9 cut(s) 398, 533, 536, 987, 990, 1269, 1272, 1645, 1714
Tsp45I GTSAC 2 cut(s) 1067, 1349
TspDTI ATGAA 7 cut(s) 54, 106, 378, 848, 904, 1017, 1299
TspGWI ACGGA 1 cut(s) 495
TspRI CASTG 9 cut(s) 331, 361, 805, 979, 1072, 1116, 1261, 1354, 1398
Van91I CCANNNNNTGG 1 cut(s) 1693
XapI RAATTY 5 cut(s) 292, 574, 639, 695, 1572
XceI RCATGY 2 cut(s) 445, 891
XcmI CCANNNNNNNNNTGG 1 cut(s) 1694
XmiI GTMKAC 1 cut(s) 111
XspI CTAG 6 cut(s) 71, 321, 743, 755, 1545, 1649
ZrmI AGTACT 1 cut(s) 505
Zsp2I ATGCAT 2 cut(s) 893, 1812
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.