Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0000911

Physical Location & Seq

Genomic Coordinates Reverse (-)

24767253 .. 24770499

Gene Structure 3247 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1137900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

ATGGCCACTGCTGTCTCTACCATTGGATCTGTCAACAGAGCACCGCCGAACCTGAATGGCTCTAGCAGCAGTGCTTCAGTTCCAAGCTCAACCTTTTTGGGAAGCAGCTTGAAGAAAGTGAACTCAAGGTTCACGAACTCCAAGGTTTCCTCCGGGAGTCTCAGGATTGTCGCGAGTGTGGACGAAGATAAGCAGACCGACAAGGACAGATGGAAAGGCCTTGCCTTCGACACCTCCGACGACCAACAAGACATCACAAGAGGAAAGGGTAAGGTGGACTCCCTCTTCCAGGCACCTCAAGGATCAGGAACTCACTTTGCCATCATGAGCTCTTATGAATACATCAGCACGGGGCTTCGCCAGTACAACTTTGACAATAACATGGACGGTTATTATATTGCTCCCGCTTTTATGGACAAGCTTGTTGTTCACATCACCAAGAACTTCATGACCCTTCCTAACATCAAGGTTCCTCTCATCTTGGGTATTTGGGGAGGCAAAGGTCAGGGCAAGTCTTTCCAGTGCGAGCTTGTCTTTGCCAAGATGGGAATCAGCCCTATCATGATGAGTGCCGGAGAATTGGAAAGTGGAAACGCAGGAGAACCCGCGAAGCTGATCAGGCAAAGGTACCGTGAAGCAGCCGACATAATCAGGAAGGGTAAAATGTGTGCACTCTTCATCAACGATCTTGATGCAGGAGCTGGTCGGCTTGGTGGAACCACCCAATACACTGTCAACAACCAAATGGTGAATGCCACCCTCATGAACATTGCTGATAACCCGACAAACGTCCAGCTTCCAGGTATGTACAACAAGGAGGAGAACCCCCGTGTCCCAATCATTGTCACCGGTAACGATTTCTCAACATTGTACGCTCCTCTCATCCGTGACGGTCGTATGGAGAAGTTCTACTGGGCTCCCACCCGCGAAGATCGTATTGGAGTCTGCATTGGGATCTTCAGGAGTGACAATGTTGCTAAGGAAGACATTGTCAAGCTTGTTGACACCTTCCCAGGCCAATCTATTGATTTCTTTGGTGCCTTGAGGGCTAGGGTTTACGACGATGAAGTGAGGAAGTGGATTACGGGTGTTGGCGTGGATAGCATTGGGAAGAAGCTTGTGAACTCAAAGGAAGGACCCCCAACTTTCGAGCAGCCGAAGATGACTATCGAAAAGCTCCTCGAGTACGGAAACATGCTTGTCCAAGAGCAAGAGAATGTGAAGAGAGTTCAATTGGCTGATAAGTACTTGAGCGAGGCTGCTCTTGGTGATGCTAACTCAGATGCTATGAATACAGGAACTTTCTATGGCCAAGCAGCGCAGCAAGTGAATGTTCCAGTTCCTGAAGGTTGCACTGATCCAACTGAGAAAACTTTGATCCAACGGCTAGAAGTGATGATGGAAGTTGCTTTTACACATTTTAAGTCATTTTCTTTTAGGTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA

Protein Analysis

482

Amino Acids

52.97

Weight (kDa)

6.86

Isoelectric Point (pI)

32.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	163 - 306	2.9e-16	ATPase family associated with various cellular activities (AAA)
RuBisCO_activase_AAA_helical	PF21228	309 - 404	1.1e-40	Ribulose bisphosphate carboxylase/oxygenase activase, AAA, helical

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000911)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39730 AT2G39730 AT2G39730
fragaria_vesca	FvH4_3g36920 FvH4_6g13160 FvH4_6g13160 FvH4_6g13160 FvH4_7g22910 FvH4_7g22910 FvH4_7g22910 FvH4_7g22910 FvH4_7g22910
malus_domestica	MD01G1137900.v1.1 MD03G1086300.v1.1 MD04G1134100.v1.1 MD07G1202200.v1.1 MD11G1095300.v1.1
prunus_persica	Prupe.2G238800_v2.0.a1 Prupe.2G238800_v2.0.a1 Prupe.2G238800_v2.0.a1 Prupe.6G070800_v2.0.a1 Prupe.6G070800_v2.0.a1 Prupe.6G070800_v2.0.a1 Prupe.6G260200_v2.0.a1 Prupe.6G260200_v2.0.a1
pyrus_communis	pycom01g15900 pycom03g06850 pycom04g12180 pycom07g18940 pycom11g08080
rosa_chinensis	RchiOBHm_Chr1g0368091 RchiOBHm_Chr3g0465651 RchiOBHm_Chr5g0066321
rosa_laevigata	RLG00000024631 RLG00000027241 RLG00000035850
rosa_multiflora	Rmu_co8504071.1_g000001 Rmu_sc0000550.1_g000020 Rmu_sc0006814.1_g000009 Rmu_sc0007705.1_g000023
rosa_roxburghii	Rroxscaffold_1G00014810 Rroxscaffold_4G00288870 Rroxscaffold_6G00414950
rosa_rugosa	Rorug01G0338800 Rorug03G0077700 Rorug03G0077800 Rorug03G0077900 Rorug03G0078000 Rorug05G0377100 Rorug05G0377200
rosa_samantha	Rh1AG345800 Rh1BG308200 Rh1CG323900 Rh1DG340300 Rh3BG143500 Rh3CG144500 Rh3DG144800 Rh5AG435700 Rh5BG452000 Rh5CG474300 Rh5DG466900
rosa_wichuraiana	Rw1G030780 Rw3G011650 Rw3G011690 Rw5G040800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1444
Acc65I	GGTACC	1 cut(s)	627
AccB1I	GGYRCC	3 cut(s)	292, 627, 1037
AccII	CGCG	3 cut(s)	173, 608, 927
AciI	CCGC	4 cut(s)	44, 405, 606, 925
AclWI	GGATC	5 cut(s)	34, 310, 962, 1352, 1372
AcoI	YGGCCR	2 cut(s)	3, 1309
AcuI	CTGAAG	3 cut(s)	60, 943, 1365
AfaI	GTAC	6 cut(s)	365, 629, 809, 872, 1187, 1247
AfiI	CCNNNNNNNGG	1 cut(s)	289
AgeI	ACCGGT	1 cut(s)	848
AgsI	TTSAA	2 cut(s)	112, 1232
AjnI	CCWGG	3 cut(s)	288, 799, 1012
AjuI	GAANNNNNNNTTGG	2 cut(s)	921, 953
Alw21I	GWGCWC	3 cut(s)	43, 332, 673
Alw26I	GTCTC	2 cut(s)	19, 164
Alw44I	GTGCAC	1 cut(s)	669
AlwI	GGATC	5 cut(s)	34, 310, 962, 1352, 1372
AlwNI	CAGNNNCTG	2 cut(s)	701, 1343
Ama87I	CYCGRG	1 cut(s)	1181
AoxI	GGCC	4 cut(s)	3, 217, 1015, 1309
ApaLI	GTGCAC	1 cut(s)	669
ApeKI	GCWGC	7 cut(s)	66, 105, 638, 1153, 1259, 1316, 1321
AsiGI	ACCGGT	1 cut(s)	848
Asp718I	GGTACC	1 cut(s)	627
AspLEI	GCGC	1 cut(s)	1321
AspS9I	GGNCC	1 cut(s)	1136
AsuC2I	CCSGG	1 cut(s)	154
AsuHPI	GGTGA	4 cut(s)	427, 760, 838, 1280
AvaI	CYCGRG	1 cut(s)	1181
AvaII	GGWCC	1 cut(s)	1136
BaeGI	GKGCMC	1 cut(s)	673
BalI	TGGCCA	2 cut(s)	5, 1311
BanI	GGYRCC	3 cut(s)	292, 627, 1037
BanII	GRGCYC	2 cut(s)	332, 919
BbsI	GAAGAC	1 cut(s)	990
Bbv12I	GWGCWC	3 cut(s)	43, 332, 673
BbvI	GCAGC	7 cut(s)	78, 117, 650, 1165, 1246, 1328, 1333
BccI	CCATC	4 cut(s)	204, 329, 538, 1393
BceAI	ACGGC	1 cut(s)	1400
BcgI	CGANNNNNNTGC	2 cut(s)	674, 708
BciT130I	CCWGG	3 cut(s)	290, 801, 1014
BclI	TGATCA	1 cut(s)	615
BcnI	CCSGG	1 cut(s)	154
BcoDI	GTCTC	2 cut(s)	19, 164
BfaI	CTAG	3 cut(s)	63, 1050, 1388
BglI	GCCNNNNNGGC	1 cut(s)	1046
BisI	GCNGC	7 cut(s)	67, 106, 639, 1154, 1260, 1317, 1322
BlsI	GCNGC	7 cut(s)	68, 107, 640, 1155, 1261, 1318, 1323
BmcAI	AGTACT	1 cut(s)	1247
Bme1390I	CCNGG	4 cut(s)	154, 290, 801, 1014
Bme18I	GGWCC	1 cut(s)	1136
BmeT110I	CYCGRG	1 cut(s)	1181
BmgT120I	GGNCC	1 cut(s)	1136
BmiI	GGNNCC	7 cut(s)	294, 471, 629, 718, 918, 1039, 1138
BmrFI	CCNGG	4 cut(s)	154, 290, 801, 1014
BmrI	ACTGGG	1 cut(s)	922
BmsI	GCATC	3 cut(s)	682, 1261, 1273
BmuI	ACTGGG	1 cut(s)	922
BoxI	GACNNNNGTC	1 cut(s)	788
BpiI	GAAGAC	1 cut(s)	990
Bpu10I	CCTNAGC	1 cut(s)	978
BpuEI	CTTGAG	4 cut(s)	109, 282, 1063, 1270
BpuMI	CCSGG	1 cut(s)	154
BsaBI	GATNNNNATC	2 cut(s)	548, 1166
BsaJI	CCNNGG	2 cut(s)	141, 1012
BsaWI	WCCGGW	1 cut(s)	848
Bsc4I	CCNNNNNNNGG	1 cut(s)	289
Bse118I	RCCGGY	1 cut(s)	848
Bse1I	ACTGG	4 cut(s)	361, 520, 917, 1337
Bse3DI	GCAATG	1 cut(s)	768
Bse8I	GATNNNNATC	2 cut(s)	548, 1166
BseBI	CCWGG	3 cut(s)	290, 801, 1014
BseDI	CCNNGG	2 cut(s)	141, 1012
BseGI	GGATG	1 cut(s)	882
BseJI	GATNNNNATC	2 cut(s)	548, 1166
BseLI	CCNNNNNNNGG	1 cut(s)	289
BseMI	GCAATG	1 cut(s)	768
BseMII	CTCAG	3 cut(s)	175, 1293, 1356
BseNI	ACTGG	4 cut(s)	361, 520, 917, 1337
BseRI	GAGGAG	3 cut(s)	833, 867, 1169
BseSI	GKGCMC	1 cut(s)	673
BseXI	GCAGC	7 cut(s)	78, 117, 650, 1165, 1246, 1328, 1333
Bsh1236I	CGCG	3 cut(s)	173, 608, 927
Bsh1285I	CGRYCG	1 cut(s)	895
BshFI	GGCC	4 cut(s)	5, 219, 1017, 1311
BshNI	GGYRCC	3 cut(s)	292, 627, 1037
BshTI	ACCGGT	1 cut(s)	848
BsiEI	CGRYCG	1 cut(s)	895
BsiHKAI	GWGCWC	3 cut(s)	43, 332, 673
BsiHKCI	CYCGRG	1 cut(s)	1181
BsiSI	CCGG	3 cut(s)	153, 573, 849
BslFI	GGGAC	1 cut(s)	818
BslI	CCNNNNNNNGG	1 cut(s)	289
BsmAI	GTCTC	2 cut(s)	19, 164
BsmFI	GGGAC	1 cut(s)	818
BsmI	GAATGC	1 cut(s)	757
BsnI	GGCC	4 cut(s)	5, 219, 1017, 1311
BsoBI	CYCGRG	1 cut(s)	1181
Bsp1286I	GDGCHC	4 cut(s)	43, 332, 673, 919
Bsp1407I	TGTACA	1 cut(s)	807
Bsp143I	GATC	8 cut(s)	26, 302, 615, 685, 931, 954, 1357, 1377
Bsp68I	TCGCGA	1 cut(s)	173
BspACI	CCGC	4 cut(s)	44, 405, 606, 925
BspANI	GGCC	4 cut(s)	5, 219, 1017, 1311
BspCNI	CTCAG	3 cut(s)	174, 1292, 1357
BspFNI	CGCG	3 cut(s)	173, 608, 927
BspHI	TCATGA	4 cut(s)	324, 447, 561, 762
BspLI	GGNNCC	7 cut(s)	294, 471, 629, 718, 918, 1039, 1138
BspPI	GGATC	5 cut(s)	34, 310, 962, 1352, 1372
BspT107I	GGYRCC	3 cut(s)	292, 627, 1037
BsrDI	GCAATG	1 cut(s)	768
BsrFI	RCCGGY	1 cut(s)	848
BsrGI	TGTACA	1 cut(s)	807
BsrI	ACTGG	4 cut(s)	361, 520, 917, 1337
BssAI	RCCGGY	1 cut(s)	848
BssECI	CCNNGG	2 cut(s)	141, 1012
BssMI	GATC	8 cut(s)	26, 302, 615, 685, 931, 954, 1357, 1377
BssT1I	CCWWGG	1 cut(s)	141
Bst2UI	CCWGG	3 cut(s)	290, 801, 1014
Bst4CI	ACNGT	4 cut(s)	389, 632, 733, 893
Bst6I	CTCTTC	3 cut(s)	290, 680, 1217
BstAUI	TGTACA	1 cut(s)	807
BstC8I	GCNNGC	1 cut(s)	527
BstDEI	CTNAG	4 cut(s)	161, 978, 1279, 1365
BstENI	CCTNNNNNAGG	1 cut(s)	287
BstF5I	GGATG	1 cut(s)	882
BstFNI	CGCG	3 cut(s)	173, 608, 927
BstHHI	GCGC	1 cut(s)	1321
BstKTI	GATC	8 cut(s)	29, 305, 618, 688, 934, 957, 1360, 1380
BstMAI	GTCTC	2 cut(s)	19, 164
BstMBI	GATC	8 cut(s)	26, 302, 615, 685, 931, 954, 1357, 1377
BstMCI	CGRYCG	1 cut(s)	895
BstMWI	GCNNNNNNNGC	4 cut(s)	66, 619, 1046, 1101
BstNI	CCWGG	3 cut(s)	290, 801, 1014
BstNSI	RCATGY	1 cut(s)	1198
BstPAI	GACNNNNGTC	1 cut(s)	788
BstSCI	CCNGG	4 cut(s)	152, 288, 799, 1012
BstSLI	GKGCMC	1 cut(s)	673
BstUI	CGCG	3 cut(s)	173, 608, 927
BstV1I	GCAGC	7 cut(s)	78, 117, 650, 1165, 1246, 1328, 1333
BstV2I	GAAGAC	1 cut(s)	990
BstX2I	RGATCY	2 cut(s)	26, 954
BstYI	RGATCY	2 cut(s)	26, 954
BsuRI	GGCC	4 cut(s)	5, 219, 1017, 1311
BtsCI	GGATG	1 cut(s)	882
BtsI	GCAGTG	2 cut(s)	6, 76
BtsIMutI	CAGTG	5 cut(s)	6, 76, 527, 729, 1353
BtuMI	TCGCGA	1 cut(s)	173
Cac8I	GCNNGC	1 cut(s)	527
CaiI	CAGNNNCTG	2 cut(s)	701, 1343
CciI	TCATGA	4 cut(s)	324, 447, 561, 762
CfoI	GCGC	1 cut(s)	1321
Cfr10I	RCCGGY	1 cut(s)	848
Cfr13I	GGNCC	1 cut(s)	1136
Csp6I	GTAC	6 cut(s)	364, 628, 808, 871, 1186, 1246
CspAI	ACCGGT	1 cut(s)	848
CviAII	CATG	6 cut(s)	325, 382, 448, 562, 763, 1195
CviQI	GTAC	6 cut(s)	364, 628, 808, 871, 1186, 1246
DdeI	CTNAG	4 cut(s)	161, 978, 1279, 1365
DpnI	GATC	8 cut(s)	28, 304, 617, 687, 933, 956, 1359, 1379
DpnII	GATC	8 cut(s)	26, 302, 615, 685, 931, 954, 1357, 1377
EaeI	YGGCCR	2 cut(s)	3, 1309
Eam1104I	CTCTTC	3 cut(s)	290, 680, 1217
EarI	CTCTTC	3 cut(s)	290, 680, 1217
Ecl136II	GAGCTC	1 cut(s)	330
Eco130I	CCWWGG	1 cut(s)	141
Eco147I	AGGCCT	1 cut(s)	219
Eco24I	GRGCYC	2 cut(s)	332, 919
Eco47I	GGWCC	1 cut(s)	1136
Eco53kI	GAGCTC	1 cut(s)	330
Eco57I	CTGAAG	3 cut(s)	60, 943, 1365
Eco88I	CYCGRG	1 cut(s)	1181
EcoICRI	GAGCTC	1 cut(s)	330
EcoNI	CCTNNNNNAGG	1 cut(s)	287
EcoO109I	RGGNCCY	1 cut(s)	1136
EcoRII	CCWGG	3 cut(s)	288, 799, 1012
EcoT14I	CCWWGG	1 cut(s)	141
EcoT38I	GRGCYC	2 cut(s)	332, 919
ErhI	CCWWGG	1 cut(s)	141
FaeI	CATG	6 cut(s)	328, 385, 451, 565, 766, 1198
FaqI	GGGAC	1 cut(s)	818
FatI	CATG	6 cut(s)	324, 381, 447, 561, 762, 1194
FauI	CCCGC	3 cut(s)	412, 613, 932
FbaI	TGATCA	1 cut(s)	615
Fnu4HI	GCNGC	7 cut(s)	67, 106, 639, 1154, 1260, 1317, 1322
FokI	GGATG	1 cut(s)	869
FriOI	GRGCYC	2 cut(s)	332, 919
Fsp4HI	GCNGC	7 cut(s)	67, 106, 639, 1154, 1260, 1317, 1322
FspBI	CTAG	3 cut(s)	63, 1050, 1388
GlaI	GCGC	1 cut(s)	1320
GluI	GCNGC	7 cut(s)	67, 106, 639, 1154, 1260, 1317, 1322
HaeIII	GGCC	4 cut(s)	5, 219, 1017, 1311
HapII	CCGG	3 cut(s)	153, 573, 849
HhaI	GCGC	1 cut(s)	1321
Hin1II	CATG	6 cut(s)	328, 385, 451, 565, 766, 1198
Hin6I	GCGC	1 cut(s)	1319
HinP1I	GCGC	1 cut(s)	1319
HincII	GTYRAC	3 cut(s)	34, 736, 1003
HindII	GTYRAC	3 cut(s)	34, 736, 1003
HindIII	AAGCTT	3 cut(s)	419, 995, 1115
HinfI	GANTC	4 cut(s)	157, 278, 549, 942
HpaII	CCGG	3 cut(s)	153, 573, 849
HphI	GGTGA	4 cut(s)	427, 760, 838, 1280
Hpy188I	TCNGA	2 cut(s)	238, 1282
Hpy99I	CGWCG	2 cut(s)	242, 1064
HpyAV	CCTTC	6 cut(s)	235, 464, 649, 1018, 1127, 1340
HpyCH4III	ACNGT	4 cut(s)	389, 632, 733, 893
HpyCH4IV	ACGT	1 cut(s)	789
HpyCH4V	TGCA	4 cut(s)	671, 695, 948, 1353
HpyF10VI	GCNNNNNNNGC	4 cut(s)	66, 619, 1046, 1101
HpyF3I	CTNAG	4 cut(s)	161, 978, 1279, 1365
HpySE526I	ACGT	1 cut(s)	789
Hsp92II	CATG	6 cut(s)	328, 385, 451, 565, 766, 1198
HspAI	GCGC	1 cut(s)	1319
KpnI	GGTACC	1 cut(s)	631
Ksp22I	TGATCA	1 cut(s)	615
Kzo9I	GATC	8 cut(s)	26, 302, 615, 685, 931, 954, 1357, 1377
LmnI	GCTCC	5 cut(s)	406, 698, 880, 922, 1182
Lsp1109I	GCAGC	7 cut(s)	78, 117, 650, 1165, 1246, 1328, 1333
LweI	GCATC	3 cut(s)	682, 1261, 1273
MaeI	CTAG	3 cut(s)	63, 1050, 1388
MaeII	ACGT	1 cut(s)	789
MaeIII	GTNAC	4 cut(s)	844, 851, 887, 965
MalI	GATC	8 cut(s)	28, 304, 617, 687, 933, 956, 1359, 1379
MboI	GATC	8 cut(s)	26, 302, 615, 685, 931, 954, 1357, 1377
MfeI	CAATTG	1 cut(s)	1232
MflI	RGATCY	2 cut(s)	26, 954
MhlI	GDGCHC	4 cut(s)	43, 332, 673, 919
MlsI	TGGCCA	2 cut(s)	5, 1311
MluCI	AATT	2 cut(s)	578, 1232
MluNI	TGGCCA	2 cut(s)	5, 1311
MlyI	GAGTC	3 cut(s)	166, 272, 951
MmeI	TCCRAC	3 cut(s)	261, 1385, 1405
Mox20I	TGGCCA	2 cut(s)	5, 1311
MscI	TGGCCA	2 cut(s)	5, 1311
MseI	TTAA	1 cut(s)	1422
MslI	CAYNNNNRTG	1 cut(s)	761
Msp20I	TGGCCA	2 cut(s)	5, 1311
MspI	CCGG	3 cut(s)	153, 573, 849
MspR9I	CCNGG	4 cut(s)	154, 290, 801, 1014
MunI	CAATTG	1 cut(s)	1232
Mva1269I	GAATGC	1 cut(s)	757
MvaI	CCWGG	3 cut(s)	290, 801, 1014
MvnI	CGCG	3 cut(s)	173, 608, 927
MwoI	GCNNNNNNNGC	4 cut(s)	66, 619, 1046, 1101
NciI	CCSGG	1 cut(s)	154
NdeII	GATC	8 cut(s)	26, 302, 615, 685, 931, 954, 1357, 1377
NlaIII	CATG	6 cut(s)	328, 385, 451, 565, 766, 1198
NlaIV	GGNNCC	7 cut(s)	294, 471, 629, 718, 918, 1039, 1138
NmuCI	GTSAC	3 cut(s)	844, 887, 965
NruI	TCGCGA	1 cut(s)	173
NspI	RCATGY	1 cut(s)	1198
PaeR7I	CTCGAG	1 cut(s)	1181
PagI	TCATGA	4 cut(s)	324, 447, 561, 762
PceI	AGGCCT	1 cut(s)	219
PcsI	WCGNNNNNNNCGW	1 cut(s)	234
PctI	GAATGC	1 cut(s)	757
PfeI	GAWTC	1 cut(s)	549
PflFI	GACNNNGTC	1 cut(s)	989
PfoI	TCCNGGA	1 cut(s)	152
PinAI	ACCGGT	1 cut(s)	848
PkrI	GCNGC	7 cut(s)	68, 107, 640, 1155, 1261, 1318, 1323
PleI	GAGTC	3 cut(s)	165, 272, 950
PpsI	GAGTC	3 cut(s)	165, 272, 950
PpuMI	RGGWCCY	1 cut(s)	1136
PshAI	GACNNNNGTC	1 cut(s)	788
PsiI	TTATAA	1 cut(s)	1444
Psp124BI	GAGCTC	1 cut(s)	332
Psp5II	RGGWCCY	1 cut(s)	1136
Psp6I	CCWGG	3 cut(s)	288, 799, 1012
PspGI	CCWGG	3 cut(s)	288, 799, 1012
PspN4I	GGNNCC	7 cut(s)	294, 471, 629, 718, 918, 1039, 1138
PspPI	GGNCC	1 cut(s)	1136
PspPPI	RGGWCCY	1 cut(s)	1136
PspXI	VCTCGAGB	1 cut(s)	1181
PstNI	CAGNNNCTG	2 cut(s)	701, 1343
PsuI	RGATCY	2 cut(s)	26, 954
PsyI	GACNNNGTC	1 cut(s)	989
RruI	TCGCGA	1 cut(s)	173
RsaI	GTAC	6 cut(s)	365, 629, 809, 872, 1187, 1247
RsaNI	GTAC	6 cut(s)	364, 628, 808, 871, 1186, 1246
RseI	CAYNNNNRTG	1 cut(s)	761
SacI	GAGCTC	1 cut(s)	332
SaqAI	TTAA	1 cut(s)	1422
SatI	GCNGC	7 cut(s)	67, 106, 639, 1154, 1260, 1317, 1322
Sau3AI	GATC	8 cut(s)	26, 302, 615, 685, 931, 954, 1357, 1377
Sau96I	GGNCC	1 cut(s)	1136
ScaI	AGTACT	1 cut(s)	1247
SchI	GAGTC	3 cut(s)	166, 272, 951
ScrFI	CCNGG	4 cut(s)	154, 290, 801, 1014
SduI	GDGCHC	4 cut(s)	43, 332, 673, 919
SfaNI	GCATC	3 cut(s)	682, 1261, 1273
Sfr274I	CTCGAG	1 cut(s)	1181
SinI	GGWCC	1 cut(s)	1136
SlaI	CTCGAG	1 cut(s)	1181
SmiMI	CAYNNNNRTG	1 cut(s)	761
SmlI	CTYRAG	5 cut(s)	124, 297, 1042, 1181, 1249
SmoI	CTYRAG	5 cut(s)	124, 297, 1042, 1181, 1249
Sse9I	AATT	2 cut(s)	578, 1232
SseBI	AGGCCT	1 cut(s)	219
SsiI	CCGC	4 cut(s)	44, 405, 606, 925
SspMI	CTAG	3 cut(s)	63, 1050, 1388
SstI	GAGCTC	1 cut(s)	332
StuI	AGGCCT	1 cut(s)	219
StyD4I	CCNGG	4 cut(s)	152, 288, 799, 1012
StyI	CCWWGG	1 cut(s)	141
TaaI	ACNGT	4 cut(s)	389, 632, 733, 893
TaiI	ACGT	1 cut(s)	792
TaqI	TCGA	4 cut(s)	228, 1149, 1170, 1182
TaqII	GACCGA	1 cut(s)	212
TasI	AATT	2 cut(s)	578, 1232
TatI	WGTACW	3 cut(s)	363, 807, 1245
TfiI	GAWTC	1 cut(s)	549
Tru1I	TTAA	1 cut(s)	1422
Tru9I	TTAA	1 cut(s)	1422
TscAI	CASTG	5 cut(s)	13, 76, 527, 736, 1360
TseFI	GTSAC	3 cut(s)	844, 887, 965
TseI	GCWGC	7 cut(s)	66, 105, 638, 1153, 1259, 1316, 1321
Tsp45I	GTSAC	3 cut(s)	844, 887, 965
TspDTI	ATGAA	6 cut(s)	351, 436, 667, 779, 1080, 1304
TspGWI	ACGGA	2 cut(s)	875, 1203
TspRI	CASTG	5 cut(s)	13, 76, 527, 736, 1360
Tth111I	GACNNNGTC	1 cut(s)	989
VneI	GTGCAC	1 cut(s)	669
VpaK11BI	GGWCC	1 cut(s)	1136
XagI	CCTNNNNNAGG	1 cut(s)	287
XceI	RCATGY	1 cut(s)	1198
XhoI	CTCGAG	1 cut(s)	1181
XspI	CTAG	3 cut(s)	63, 1050, 1388
ZrmI	AGTACT	1 cut(s)	1247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.