Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0000911

Physical Location & Seq

Genomic Coordinates Forward (+)

7949326 .. 7952990

Gene Structure 3665 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1095300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1419 bp

ATGACCACCATGCACACAGTCTCGAGCGTCGGAACTGTTAACCGGACTCCGGTGAGCCTGAACGGCTCCGGTTCCGGAAGCTCAGCCTTCTTGGGCACCACTTTGAAGAAAGCGACCTCAAGAGTCCCCTACCAGAAGATTGCATCTGCAGGCAAGTTAAAAATCAATGCGGAAGTCGACGAGAATAAGCAAACCAACAAGGACAGATGGAAAGGCCTTGCCTACGATATTTCCGATGACCAACAAGACATAACAAGAGGAAAGGGTTTGGTTGATTCTGTGTTCCAAGCTCCCCAGGGGAGTGGAACTCACTATGCTATCATGAGCTCATACGAATACATCAGTACCGGACTTCGAGAGTACAACTTTGACAACAACATGGATGGGTTTTACATCGCTCCAGCTTTCATGGACAAGCTTGTGGTTCACATAACCAAAAACTTCATGAGCCTGCCTAACATTAAGATTCCTCTCATTCTTGGTATATGGGGAGGAAAAGGTCAGGGAAAATCCTTCCAGTGTGAGCTTGTGTTTGCCAAGATGGGAATTACCCCCATCATGATGAGTGCTGGAGAATTAGAAAGCGGGAATGCAGGAGAGCCCGCGAAACTGATCAGGCAAAGGTACCGTGAGGCTGCAGATATCATCAGGAAAGGAAAAATGTGTGCCCTCTTCATCAATGATCTCGATGCAGGTGCCGGTAGGATGGGTGGAACCACACAGTACACTGTGAACAACCAGATGGTGAATGCTACCCTTATGAACATTGCTGATAACCCGACAAACGTGCAGCTTCCCGGTATGTACAACAAGGAGGAGAATCCTAGAGTCCCCATCATTGTCACTGGTAACGATTTCTCCACATTGTATGCCCCTCTCATTCGTGATGGTCGTATGGAGAAGTTCTACTGGGCTCCCACTAGGGACGACCGGATCGGTGTTTGCACCGGAATCTTCAAGCCTGATAATGTGTCCCAGGAAGATGTTGTCAAGATTGTTGACACATTCCCCGGTCAATCCATTGATTTCTTCGGTGCCCTAAGGGCTCGAGTTTATGACGATGAAGTGAGGAAGTGGATTTCCGGTGTTGGAATTGACGGGATTGGGAAGAAGCTTGTGAACTCAAAAGAAGGTCCCCCGACTTTCGATCAACCTAAGATGACTCTGGAGAAGCTCCTTCACTACGGACAAATGCTTGTTCAGGAGCAGGACAATGTGAAGAGAGTCCAACTGGCTGACAAGTACTTGGCCGATGCAGCCCTTGGAGATGCAAACCAGGACTCCATTAACCGAGGAGAATTCTATGGAAAGGCAGCCCAACAAGTTAATGTACCAGTCCCAGAAGGCTGCACTGATAGAACAGCTGCAAACTTCAACCCAGCAGCAAGGAGTGACGACGGTAGCTGTCAGTACGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA

Protein Analysis

473

Amino Acids

51.84

Weight (kDa)

6.49

Isoelectric Point (pI)

33.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	162 - 305	1.7e-16	ATPase family associated with various cellular activities (AAA)
RuBisCO_activase_AAA_helical	PF21228	308 - 403	1e-40	Ribulose bisphosphate carboxylase/oxygenase activase, AAA, helical

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000911)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39730 AT2G39730 AT2G39730
fragaria_vesca	FvH4_3g36920 FvH4_6g13160 FvH4_6g13160 FvH4_6g13160 FvH4_7g22910 FvH4_7g22910 FvH4_7g22910 FvH4_7g22910 FvH4_7g22910
malus_domestica	MD01G1137900.v1.1 MD03G1086300.v1.1 MD04G1134100.v1.1 MD07G1202200.v1.1 MD11G1095300.v1.1
prunus_persica	Prupe.2G238800_v2.0.a1 Prupe.2G238800_v2.0.a1 Prupe.2G238800_v2.0.a1 Prupe.6G070800_v2.0.a1 Prupe.6G070800_v2.0.a1 Prupe.6G070800_v2.0.a1 Prupe.6G260200_v2.0.a1 Prupe.6G260200_v2.0.a1
pyrus_communis	pycom01g15900 pycom03g06850 pycom04g12180 pycom07g18940 pycom11g08080
rosa_chinensis	RchiOBHm_Chr1g0368091 RchiOBHm_Chr3g0465651 RchiOBHm_Chr5g0066321
rosa_laevigata	RLG00000024631 RLG00000027241 RLG00000035850
rosa_multiflora	Rmu_co8504071.1_g000001 Rmu_sc0000550.1_g000020 Rmu_sc0006814.1_g000009 Rmu_sc0007705.1_g000023
rosa_roxburghii	Rroxscaffold_1G00014810 Rroxscaffold_4G00288870 Rroxscaffold_6G00414950
rosa_rugosa	Rorug01G0338800 Rorug03G0077700 Rorug03G0077800 Rorug03G0077900 Rorug03G0078000 Rorug05G0377100 Rorug05G0377200
rosa_samantha	Rh1AG345800 Rh1BG308200 Rh1CG323900 Rh1DG340300 Rh3BG143500 Rh3CG144500 Rh3DG144800 Rh5AG435700 Rh5BG452000 Rh5CG474300 Rh5DG466900
rosa_wichuraiana	Rw1G030780 Rw3G011650 Rw3G011690 Rw5G040800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	683
Acc36I	ACCTGC	1 cut(s)	683
Acc65I	GGTACC	1 cut(s)	624
AccB1I	GGYRCC	4 cut(s)	95, 624, 695, 1034
AccI	GTMKAC	1 cut(s)	177
AccII	CGCG	1 cut(s)	605
AccIII	TCCGGA	1 cut(s)	74
AciI	CCGC	3 cut(s)	170, 585, 603
AclWI	GGATC	1 cut(s)	941
AcoI	YGGCCR	1 cut(s)	1248
AcsI	RAATTY	1 cut(s)	1298
AfaI	GTAC	8 cut(s)	346, 362, 626, 725, 806, 1244, 1332, 1412
AfiI	CCNNNNNNNGG	1 cut(s)	49
AgsI	TTSAA	3 cut(s)	106, 958, 1375
AjnI	CCWGG	3 cut(s)	294, 975, 1275
Alw21I	GWGCWC	1 cut(s)	329
Alw26I	GTCTC	1 cut(s)	25
AlwI	GGATC	1 cut(s)	941
Ama87I	CYCGRG	2 cut(s)	22, 1047
Aor13HI	TCCGGA	1 cut(s)	74
AoxI	GGCC	2 cut(s)	214, 1248
ApeKI	GCWGC	7 cut(s)	635, 790, 1256, 1313, 1347, 1364, 1382
ApoI	RAATTY	1 cut(s)	1298
Asp718I	GGTACC	1 cut(s)	624
AspS9I	GGNCC	1 cut(s)	1133
AsuC2I	CCSGG	2 cut(s)	798, 1011
AsuHPI	GGTGA	2 cut(s)	64, 757
AvaI	CYCGRG	2 cut(s)	22, 1047
AvaII	GGWCC	1 cut(s)	1133
AxyI	CCTNAGG	1 cut(s)	1040
BaeGI	GKGCMC	3 cut(s)	98, 670, 1039
BaeI	ACNNNNGTAYC	2 cut(s)	328, 361
BanI	GGYRCC	4 cut(s)	95, 624, 695, 1034
BanII	GRGCYC	4 cut(s)	329, 603, 916, 1048
Bbv12I	GWGCWC	1 cut(s)	329
BbvI	GCAGC	7 cut(s)	622, 802, 1268, 1325, 1334, 1351, 1394
BccI	CCATC	8 cut(s)	201, 377, 535, 563, 700, 736, 842, 881
BceAI	ACGGC	1 cut(s)	79
BcgI	CGANNNNNNTGC	4 cut(s)	677, 711, 769, 803
BciT130I	CCWGG	3 cut(s)	296, 977, 1277
BclI	TGATCA	1 cut(s)	612
BcnI	CCSGG	2 cut(s)	798, 1011
BcoDI	GTCTC	1 cut(s)	25
BfaI	CTAG	2 cut(s)	825, 921
BfmI	CTRYAG	2 cut(s)	147, 636
BfuAI	ACCTGC	1 cut(s)	683
BglI	GCCNNNNNGGC	2 cut(s)	63, 1043
BisI	GCNGC	7 cut(s)	636, 791, 1257, 1314, 1348, 1365, 1383
BlpI	GCTNAGC	1 cut(s)	82
BlsI	GCNGC	7 cut(s)	637, 792, 1258, 1315, 1349, 1366, 1384
BmcAI	AGTACT	1 cut(s)	1244
Bme1390I	CCNGG	5 cut(s)	296, 798, 977, 1011, 1277
Bme18I	GGWCC	1 cut(s)	1133
BmeT110I	CYCGRG	2 cut(s)	22, 1047
BmgT120I	GGNCC	1 cut(s)	1133
BmiI	GGNNCC	9 cut(s)	67, 73, 97, 626, 697, 715, 915, 1036, 1135
BmrFI	CCNGG	5 cut(s)	296, 798, 977, 1011, 1277
BmrI	ACTGGG	1 cut(s)	919
BmsI	GCATC	4 cut(s)	152, 679, 1243, 1258
BmuI	ACTGGG	1 cut(s)	919
BplI	GAGNNNNNCTC	2 cut(s)	292, 324
BpmI	CTGGAG	3 cut(s)	384, 591, 1187
Bpu1102I	GCTNAGC	1 cut(s)	82
BpuEI	CTTGAG	1 cut(s)	103
BpuMI	CCSGG	2 cut(s)	798, 1011
BsaJI	CCNNGG	6 cut(s)	294, 295, 975, 1009, 1261, 1291
BsaWI	WCCGGW	8 cut(s)	42, 49, 68, 74, 347, 930, 947, 1082
BsaXI	ACNNNNNCTCC	4 cut(s)	842, 872, 1265, 1295
Bsc4I	CCNNNNNNNGG	1 cut(s)	49
Bse118I	RCCGGY	1 cut(s)	698
Bse1I	ACTGG	5 cut(s)	517, 850, 914, 1236, 1334
Bse21I	CCTNAGG	1 cut(s)	1040
Bse3DI	GCAATG	1 cut(s)	765
BseAI	TCCGGA	1 cut(s)	74
BseBI	CCWGG	3 cut(s)	296, 977, 1277
BseDI	CCNNGG	6 cut(s)	294, 295, 975, 1009, 1261, 1291
BseGI	GGATG	2 cut(s)	388, 711
BseLI	CCNNNNNNNGG	1 cut(s)	49
BseMI	GCAATG	1 cut(s)	765
BseMII	CTCAG	1 cut(s)	96
BseNI	ACTGG	5 cut(s)	517, 850, 914, 1236, 1334
BseRI	GAGGAG	2 cut(s)	830, 1308
BseSI	GKGCMC	3 cut(s)	98, 670, 1039
BseXI	GCAGC	7 cut(s)	622, 802, 1268, 1325, 1334, 1351, 1394
BseYI	CCCAGC	1 cut(s)	1378
BsgI	GTGCAG	2 cut(s)	809, 1333
Bsh1236I	CGCG	1 cut(s)	605
Bsh1285I	CGRYCG	1 cut(s)	931
BshFI	GGCC	2 cut(s)	216, 1250
BshNI	GGYRCC	4 cut(s)	95, 624, 695, 1034
BsiEI	CGRYCG	1 cut(s)	931
BsiHKAI	GWGCWC	1 cut(s)	329
BsiHKCI	CYCGRG	2 cut(s)	22, 1047
BslFI	GGGAC	6 cut(s)	110, 815, 938, 958, 1119, 1322
BslI	CCNNNNNNNGG	1 cut(s)	49
BsmAI	GTCTC	1 cut(s)	25
BsmFI	GGGAC	6 cut(s)	110, 815, 938, 958, 1119, 1322
BsmI	GAATGC	2 cut(s)	595, 754
BsnI	GGCC	2 cut(s)	216, 1250
BsoBI	CYCGRG	2 cut(s)	22, 1047
Bsp1286I	GDGCHC	7 cut(s)	98, 329, 603, 670, 916, 1039, 1048
Bsp13I	TCCGGA	1 cut(s)	74
Bsp1407I	TGTACA	1 cut(s)	804
Bsp143I	GATC	4 cut(s)	612, 682, 933, 1147
Bsp1720I	GCTNAGC	1 cut(s)	82
BspACI	CCGC	3 cut(s)	170, 585, 603
BspANI	GGCC	2 cut(s)	216, 1250
BspCNI	CTCAG	1 cut(s)	95
BspEI	TCCGGA	1 cut(s)	74
BspFNI	CGCG	1 cut(s)	605
BspHI	TCATGA	3 cut(s)	321, 444, 558
BspLI	GGNNCC	9 cut(s)	67, 73, 97, 626, 697, 715, 915, 1036, 1135
BspMAI	CTGCAG	2 cut(s)	151, 640
BspMI	ACCTGC	1 cut(s)	683
BspPI	GGATC	1 cut(s)	941
BspT107I	GGYRCC	4 cut(s)	95, 624, 695, 1034
BsrDI	GCAATG	1 cut(s)	765
BsrFI	RCCGGY	1 cut(s)	698
BsrGI	TGTACA	1 cut(s)	804
BsrI	ACTGG	5 cut(s)	517, 850, 914, 1236, 1334
BssAI	RCCGGY	1 cut(s)	698
BssECI	CCNNGG	6 cut(s)	294, 295, 975, 1009, 1261, 1291
BssMI	GATC	4 cut(s)	612, 682, 933, 1147
BssT1I	CCWWGG	1 cut(s)	1261
Bst2UI	CCWGG	3 cut(s)	296, 977, 1277
Bst4CI	ACNGT	6 cut(s)	19, 37, 629, 723, 730, 1400
Bst6I	CTCTTC	2 cut(s)	677, 1214
BstAUI	TGTACA	1 cut(s)	804
BstC8I	GCNNGC	3 cut(s)	151, 452, 603
BstDEI	CTNAG	3 cut(s)	82, 1040, 1155
BstF5I	GGATG	2 cut(s)	388, 711
BstFNI	CGCG	1 cut(s)	605
BstKTI	GATC	4 cut(s)	615, 685, 936, 1150
BstMAI	GTCTC	1 cut(s)	25
BstMBI	GATC	4 cut(s)	612, 682, 933, 1147
BstMCI	CGRYCG	1 cut(s)	931
BstMWI	GCNNNNNNNGC	3 cut(s)	63, 1043, 1256
BstNI	CCWGG	3 cut(s)	296, 977, 1277
BstSCI	CCNGG	5 cut(s)	294, 796, 975, 1009, 1275
BstSFI	CTRYAG	2 cut(s)	147, 636
BstSLI	GKGCMC	3 cut(s)	98, 670, 1039
BstUI	CGCG	1 cut(s)	605
BstV1I	GCAGC	7 cut(s)	622, 802, 1268, 1325, 1334, 1351, 1394
BstXI	CCANNNNNNTGG	1 cut(s)	302
Bsu36I	CCTNAGG	1 cut(s)	1040
BsuRI	GGCC	2 cut(s)	216, 1250
BtgZI	GCGATG	1 cut(s)	379
BtsCI	GGATG	2 cut(s)	388, 711
BtsIMutI	CAGTG	4 cut(s)	524, 726, 843, 1350
BveI	ACCTGC	1 cut(s)	683
Cac8I	GCNNGC	3 cut(s)	151, 452, 603
CciI	TCATGA	3 cut(s)	321, 444, 558
Cfr10I	RCCGGY	1 cut(s)	698
Cfr13I	GGNCC	1 cut(s)	1133
CseI	GACGC	1 cut(s)	16
Csp6I	GTAC	8 cut(s)	345, 361, 625, 724, 805, 1243, 1331, 1411
CviAII	CATG	6 cut(s)	10, 322, 379, 409, 445, 559
CviQI	GTAC	8 cut(s)	345, 361, 625, 724, 805, 1243, 1331, 1411
DdeI	CTNAG	3 cut(s)	82, 1040, 1155
DpnI	GATC	4 cut(s)	614, 684, 935, 1149
DpnII	GATC	4 cut(s)	612, 682, 933, 1147
EaeI	YGGCCR	1 cut(s)	1248
Eam1104I	CTCTTC	2 cut(s)	677, 1214
EarI	CTCTTC	2 cut(s)	677, 1214
Ecl136II	GAGCTC	1 cut(s)	327
Eco130I	CCWWGG	1 cut(s)	1261
Eco147I	AGGCCT	1 cut(s)	216
Eco24I	GRGCYC	4 cut(s)	329, 603, 916, 1048
Eco32I	GATATC	1 cut(s)	643
Eco47I	GGWCC	1 cut(s)	1133
Eco53kI	GAGCTC	1 cut(s)	327
Eco81I	CCTNAGG	1 cut(s)	1040
Eco88I	CYCGRG	2 cut(s)	22, 1047
EcoICRI	GAGCTC	1 cut(s)	327
EcoO109I	RGGNCCY	1 cut(s)	1133
EcoRI	GAATTC	1 cut(s)	1298
EcoRII	CCWGG	3 cut(s)	294, 975, 1275
EcoRV	GATATC	1 cut(s)	643
EcoT14I	CCWWGG	1 cut(s)	1261
EcoT38I	GRGCYC	4 cut(s)	329, 603, 916, 1048
ErhI	CCWWGG	1 cut(s)	1261
FaeI	CATG	6 cut(s)	13, 325, 382, 412, 448, 562
FaqI	GGGAC	6 cut(s)	110, 815, 938, 958, 1119, 1322
FatI	CATG	6 cut(s)	9, 321, 378, 408, 444, 558
FauI	CCCGC	2 cut(s)	578, 610
FbaI	TGATCA	1 cut(s)	612
FblI	GTMKAC	1 cut(s)	177
Fnu4HI	GCNGC	7 cut(s)	636, 791, 1257, 1314, 1348, 1365, 1383
FokI	GGATG	2 cut(s)	395, 718
FriOI	GRGCYC	4 cut(s)	329, 603, 916, 1048
Fsp4HI	GCNGC	7 cut(s)	636, 791, 1257, 1314, 1348, 1365, 1383
FspBI	CTAG	2 cut(s)	825, 921
GluI	GCNGC	7 cut(s)	636, 791, 1257, 1314, 1348, 1365, 1383
GsaI	CCCAGC	1 cut(s)	1382
GsuI	CTGGAG	3 cut(s)	384, 591, 1187
HaeIII	GGCC	2 cut(s)	216, 1250
HgaI	GACGC	1 cut(s)	16
Hin1II	CATG	6 cut(s)	13, 325, 382, 412, 448, 562
HincII	GTYRAC	3 cut(s)	40, 178, 1000
HindII	GTYRAC	3 cut(s)	40, 178, 1000
HindIII	AAGCTT	2 cut(s)	416, 1112
HpaI	GTTAAC	1 cut(s)	40
HphI	GGTGA	2 cut(s)	64, 757
Hpy166II	GTNNAC	7 cut(s)	40, 178, 427, 726, 733, 1000, 1120
Hpy188I	TCNGA	2 cut(s)	32, 235
Hpy8I	GTNNAC	7 cut(s)	40, 178, 427, 726, 733, 1000, 1120
Hpy99I	CGWCG	3 cut(s)	32, 182, 1400
HpyAV	CCTTC	5 cut(s)	97, 523, 1124, 1187, 1337
HpyCH4III	ACNGT	6 cut(s)	19, 37, 629, 723, 730, 1400
HpyCH4IV	ACGT	1 cut(s)	786
HpyF10VI	GCNNNNNNNGC	3 cut(s)	63, 1043, 1256
HpyF3I	CTNAG	3 cut(s)	82, 1040, 1155
HpySE526I	ACGT	1 cut(s)	786
Hsp92II	CATG	6 cut(s)	13, 325, 382, 412, 448, 562
Kpn2I	TCCGGA	1 cut(s)	74
KpnI	GGTACC	1 cut(s)	628
Ksp22I	TGATCA	1 cut(s)	612
KspAI	GTTAAC	1 cut(s)	40
Kzo9I	GATC	4 cut(s)	612, 682, 933, 1147
LmnI	GCTCC	6 cut(s)	71, 295, 403, 919, 1179, 1204
Lsp1109I	GCAGC	7 cut(s)	622, 802, 1268, 1325, 1334, 1351, 1394
LweI	GCATC	4 cut(s)	152, 679, 1243, 1258
MaeI	CTAG	2 cut(s)	825, 921
MaeII	ACGT	1 cut(s)	786
MaeIII	GTNAC	3 cut(s)	841, 848, 1391
MalI	GATC	4 cut(s)	614, 684, 935, 1149
MboI	GATC	4 cut(s)	612, 682, 933, 1147
MboII	GAAGA	8 cut(s)	118, 148, 664, 946, 992, 1021, 1120, 1231
MhlI	GDGCHC	7 cut(s)	98, 329, 603, 670, 916, 1039, 1048
MluCI	AATT	4 cut(s)	546, 575, 1092, 1298
MlyI	GAGTC	6 cut(s)	40, 132, 837, 1156, 1233, 1274
MmeI	TCCRAC	3 cut(s)	10, 1069, 1252
MroI	TCCGGA	1 cut(s)	74
MseI	TTAA	5 cut(s)	39, 158, 462, 1287, 1326
MslI	CAYNNNNRTG	1 cut(s)	560
MspA1I	CMGCKG	1 cut(s)	1364
MspR9I	CCNGG	5 cut(s)	296, 798, 977, 1011, 1277
Mva1269I	GAATGC	2 cut(s)	595, 754
MvaI	CCWGG	3 cut(s)	296, 977, 1277
MvnI	CGCG	1 cut(s)	605
MwoI	GCNNNNNNNGC	3 cut(s)	63, 1043, 1256
NciI	CCSGG	2 cut(s)	798, 1011
NdeII	GATC	4 cut(s)	612, 682, 933, 1147
NlaIII	CATG	6 cut(s)	13, 325, 382, 412, 448, 562
NlaIV	GGNNCC	9 cut(s)	67, 73, 97, 626, 697, 715, 915, 1036, 1135
NmuCI	GTSAC	2 cut(s)	841, 1391
PaeR7I	CTCGAG	2 cut(s)	22, 1047
PagI	TCATGA	3 cut(s)	321, 444, 558
PaqCI	CACCTGC	1 cut(s)	683
PasI	CCCWGGG	1 cut(s)	295
PceI	AGGCCT	1 cut(s)	216
PcsI	WCGNNNNNNNCGW	2 cut(s)	231, 889
PctI	GAATGC	2 cut(s)	595, 754
PfeI	GAWTC	4 cut(s)	275, 466, 820, 951
PkrI	GCNGC	7 cut(s)	637, 792, 1258, 1315, 1349, 1366, 1384
PleI	GAGTC	6 cut(s)	40, 131, 836, 1156, 1232, 1274
PpsI	GAGTC	6 cut(s)	40, 131, 836, 1156, 1232, 1274
PpuMI	RGGWCCY	1 cut(s)	1133
Psp124BI	GAGCTC	1 cut(s)	329
Psp5II	RGGWCCY	1 cut(s)	1133
Psp6I	CCWGG	3 cut(s)	294, 975, 1275
PspFI	CCCAGC	1 cut(s)	1378
PspGI	CCWGG	3 cut(s)	294, 975, 1275
PspN4I	GGNNCC	9 cut(s)	67, 73, 97, 626, 697, 715, 915, 1036, 1135
PspPI	GGNCC	1 cut(s)	1133
PspPPI	RGGWCCY	1 cut(s)	1133
PspXI	VCTCGAGB	1 cut(s)	1047
PstI	CTGCAG	2 cut(s)	151, 640
PvuII	CAGCTG	1 cut(s)	1364
RsaI	GTAC	8 cut(s)	346, 362, 626, 725, 806, 1244, 1332, 1412
RsaNI	GTAC	8 cut(s)	345, 361, 625, 724, 805, 1243, 1331, 1411
RseI	CAYNNNNRTG	1 cut(s)	560
SacI	GAGCTC	1 cut(s)	329
SalI	GTCGAC	1 cut(s)	176
SaqAI	TTAA	5 cut(s)	39, 158, 462, 1287, 1326
SatI	GCNGC	7 cut(s)	636, 791, 1257, 1314, 1348, 1365, 1383
Sau3AI	GATC	4 cut(s)	612, 682, 933, 1147
Sau96I	GGNCC	1 cut(s)	1133
ScaI	AGTACT	1 cut(s)	1244
SchI	GAGTC	6 cut(s)	40, 132, 837, 1156, 1233, 1274
ScrFI	CCNGG	5 cut(s)	296, 798, 977, 1011, 1277
SduI	GDGCHC	7 cut(s)	98, 329, 603, 670, 916, 1039, 1048
SfaNI	GCATC	4 cut(s)	152, 679, 1243, 1258
SfcI	CTRYAG	2 cut(s)	147, 636
Sfr274I	CTCGAG	2 cut(s)	22, 1047
SinI	GGWCC	1 cut(s)	1133
SlaI	CTCGAG	2 cut(s)	22, 1047
SmiMI	CAYNNNNRTG	1 cut(s)	560
SmlI	CTYRAG	3 cut(s)	22, 118, 1047
SmoI	CTYRAG	3 cut(s)	22, 118, 1047
Sse9I	AATT	4 cut(s)	546, 575, 1092, 1298
SseBI	AGGCCT	1 cut(s)	216
SsiI	CCGC	3 cut(s)	170, 585, 603
SspMI	CTAG	2 cut(s)	825, 921
SstI	GAGCTC	1 cut(s)	329
StuI	AGGCCT	1 cut(s)	216
StyD4I	CCNGG	5 cut(s)	294, 796, 975, 1009, 1275
StyI	CCWWGG	1 cut(s)	1261
TaaI	ACNGT	6 cut(s)	19, 37, 629, 723, 730, 1400
TaiI	ACGT	1 cut(s)	789
TaqI	TCGA	6 cut(s)	23, 177, 355, 687, 1048, 1146
TasI	AATT	4 cut(s)	546, 575, 1092, 1298
TatI	WGTACW	4 cut(s)	360, 723, 804, 1242
TfiI	GAWTC	4 cut(s)	275, 466, 820, 951
Tru1I	TTAA	5 cut(s)	39, 158, 462, 1287, 1326
Tru9I	TTAA	5 cut(s)	39, 158, 462, 1287, 1326
TscAI	CASTG	4 cut(s)	524, 733, 850, 1357
TseFI	GTSAC	2 cut(s)	841, 1391
TseI	GCWGC	7 cut(s)	635, 790, 1256, 1313, 1347, 1364, 1382
Tsp45I	GTSAC	2 cut(s)	841, 1391
TspDTI	ATGAA	5 cut(s)	397, 433, 664, 776, 1077
TspGWI	ACGGA	1 cut(s)	1200
TspRI	CASTG	4 cut(s)	524, 733, 850, 1357
VpaK11BI	GGWCC	1 cut(s)	1133
XapI	RAATTY	1 cut(s)	1298
XhoI	CTCGAG	2 cut(s)	22, 1047
XmiI	GTMKAC	1 cut(s)	177
XspI	CTAG	2 cut(s)	825, 921
ZrmI	AGTACT	1 cut(s)	1244

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.