Rorug03G0077900

Ribulose bisphosphate carboxylase oxygenase activase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000911
Physical Location & Seq
Forward (+)
6090500 .. 6093134
2635 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0077900.1

Sequence Viewer

Length: 2052 bp
ATGGCACTTGAGAAGGATTCAGAGGTAGCAGAATTGACAGAGTCTGGCAAAAATATTGAGCAAGATTTGGTGGAACAAATCCTATCAACTCTGCCTCCCAAATCTCTTATGCGATTCAAATGCGTCTCTAAATGGTGGTACCATCTCATCACCAGTCCCAGGTTCGTAGCCAAGCACCTCTCCATTTCCAAACACAACAGACCCTCAACTTGTGCTCTTATAAAGCGTTTAGTCTGCAATGACGCAGAAGCTCAAGAGCCTGAAATGGTTTTCTCATTGCTTAACTTTTCCTATGAAAATGATAATAACGCAGCTGGTGCGCTTAGCACTAATCTTTCTAGTGTGGAAGACCTCACAATCCCTACAAGGGTAGTCGAATCACTTCGTATTATAGGCCATTGTGATGGGATTGTTTGTCTAGCTTTAATCGATTATCAGCAGAGGCTAGCTAAACCTAGTCAAGTGTGTCTATGCAATCCTGCAATTCAGCAATTTAAATTTCTTCCCGAGGAGCCATTCCTTCCAGATTGGTCCAAGGTACCACACAGCCGTATGGTCCAAGAATTTGCTTACCTGCGTCCAATATCTCTACTCAATGGTGAAACCATGGGGTTTGGCTATGATCCTAAATCTAAAGATTACAAGGTTATTGACATTGGATTTTCTGATTCCAAATTTTATGGTGATCCAGAATGTTATGGTGGACATGTGATTGTTTATCCCCCAAAAGCAGTAGTATACACCCTGCAAACTGATTCTTGGAGAGAGATCAAGACTTTTTCTTTGGAAAGGGAAACCAGTTACCTTTGGCCTGATACGTTCCAGCTATACTTGAAGGGTGTTTGTTATTGGTTGGGATATGAGCAACAAAAGGAATTCTTATGTCTATTTCAGACTCACCAAGAAGAGGAAGAACGCATTGCCCGAGCGATCATTTCGTTTGATACTAGTGATGAGGTTTTTCATGATATAATGTTACCGTATGGGCTACTGGAATTTTACGGTTTTGATAATTTCCTTACATTGCATCTTACGGAATGGAATGAGTCTGTTGCTCTTTTCAGCTTGCTTTTTGAGGACGAGCACAAAGCTACAATGTGGGTGATGGATGCCAAAGGTGCTTGGACAAAGCAATTAACTTTTGAATATGTAGACTACTTTCCTTACAGCTTACCTCAAAAGATATTGGCATTTTGGAAGAGCAACGAAATTTTTGGGGTTGGAGAAAATGGATCTATTGTCTGCTATAACCTCAATACCAAAATTGTCAAGCATCTTCCGATTCGAAGTGTTCCAGATTATTTTCCACCCTCTAGACACACTTTCTATCCTTTTTGTGGTATTGCTTATGTGAATAGTGTCTTACCAATCATGAATCATAGAAATTCACAACCCAGAAAAATTCAGAGAATTTTTAGTACTAATGACACAGAAGAAGAACCCAGCAGCAGAAAATGCTACGATGGAGATAGAGAGCAGCAAGCCCTCAGGAATGGGCTTGTGGCTGGTGGGCTTAGTCCTCTGAATGAGACTCTATGGTGGGAGAAGGCCATTGTGGAAATTGTAGGGGATGTGTCGGCGAGGCTGACGTGGAACGATCTGACAGGGATGGTGACTCTGAGCAACGATGAGATTCAGACGGCTTTGGAGGGTTTAACTGGTTATGCAGAGACTGAAAGCTTCACAGCTTTGATGGGCCCTTCTGGTTCCGGCAAATCAACCTTGCTTGAGGCTCTCTCTAGCCGTTTGGCTTCCAATGCCTTCCATCTGGCTCTGTTTTACTCTAACGGACGCAAAAGAAAGCTCTCTTTCGGCACAGCTTATATACTTTATACTACATTGTTGTGTTATAGGGTTAGTCTGCTAATGACCATTTGGGCTTTAATTTGTCGCAGTGCTTCAGCATTTTTCATAACACAGGAGATATCTTCAATTCACAAGCCAAACAGTGAAGTCTTTGAACTACTTGATCAACTCTACTTGCTTCCTGGTGGCAACACAGTTTACTTTGGTCAGGCCTCTGAGGCATATGAGGAGTTGGGCCACATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA

Protein Analysis

683

Amino Acids

77.88

Weight (kDa)

5.23

Isoelectric Point (pI)

40.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 22 - 55 6.7e-07 F-box domain
FBA_3 PF08268 107 - 445 2.2e-13 F-box associated beta propeller domain
FBA_1 PF07734 127 - 421 1.6e-16 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 221
Acc36I ACCTGC 1 cut(s) 582
Acc65I GGTACC 2 cut(s) 138, 538
AccB1I GGYRCC 2 cut(s) 138, 538
AccI GTMKAC 2 cut(s) 738, 1152
AclWI GGATC 3 cut(s) 617, 680, 1240
AcsI RAATTY 9 cut(s) 497, 563, 674, 875, 995, 1209, 1384, 1401, 1410
AcuI CTGAAG 1 cut(s) 1884
AfaI GTAC 3 cut(s) 140, 540, 1420
AfiI CCNNNNNNNGG 4 cut(s) 159, 367, 907, 1337
AflIII ACRYGT 1 cut(s) 706
AgsI TTSAA 5 cut(s) 118, 835, 1145, 1932, 1961
AhlI ACTAGT 1 cut(s) 947
AjiI CACGTC 1 cut(s) 1590
AjnI CCWGG 2 cut(s) 158, 1987
Alw21I GWGCWC 2 cut(s) 217, 1086
Alw26I GTCTC 3 cut(s) 130, 1523, 1664
AlwI GGATC 3 cut(s) 617, 680, 1240
AlwNI CAGNNNCTG 2 cut(s) 44, 1673
Ama87I CYCGRG 2 cut(s) 506, 924
AoxI GGCC 6 cut(s) 394, 809, 1548, 1696, 2016, 2041
ApaI GGGCCC 1 cut(s) 1700
ApeKI GCWGC 3 cut(s) 311, 1446, 1477
ApoI RAATTY 9 cut(s) 497, 563, 674, 875, 995, 1209, 1384, 1401, 1410
ArsI GACNNNNNNTTYG 2 cut(s) 766, 798
Asp700I GAANNNNTTC 1 cut(s) 381
Asp718I GGTACC 2 cut(s) 138, 538
AspLEI GCGC 1 cut(s) 322
AspS9I GGNCC 5 cut(s) 531, 556, 1696, 1697, 2041
AsuHPI GGTGA 6 cut(s) 142, 611, 695, 890, 1114, 1624
AsuII TTCGAA 1 cut(s) 1285
AsuNHI GCTAGC 1 cut(s) 445
AvaI CYCGRG 2 cut(s) 506, 924
AvaII GGWCC 2 cut(s) 531, 556
AxyI CCTNAGG 1 cut(s) 1487
BaeGI GKGCMC 1 cut(s) 1700
BanI GGYRCC 2 cut(s) 138, 538
BanII GRGCYC 1 cut(s) 1700
BbsI GAAGAC 1 cut(s) 354
Bbv12I GWGCWC 2 cut(s) 217, 1086
BbvI GCAGC 3 cut(s) 323, 1458, 1489
BccI CCATC 7 cut(s) 150, 398, 1099, 1457, 1603, 1687, 1773
BceAI ACGGC 3 cut(s) 534, 1656, 1728
BcgI CGANNNNNNTGC 2 cut(s) 102, 136
BciT130I CCWGG 2 cut(s) 160, 1989
BclI TGATCA 1 cut(s) 1969
BcoDI GTCTC 3 cut(s) 130, 1523, 1664
BcuI ACTAGT 1 cut(s) 947
BfaI CTAG 7 cut(s) 339, 419, 446, 456, 948, 1314, 1740
BfuAI ACCTGC 1 cut(s) 582
BglI GCCNNNNNGGC 1 cut(s) 2024
BisI GCNGC 3 cut(s) 312, 1447, 1478
BlpI GCTNAGC 1 cut(s) 323
BlsI GCNGC 3 cut(s) 313, 1448, 1479
BmcAI AGTACT 1 cut(s) 1420
Bme1390I CCNGG 2 cut(s) 160, 1989
Bme18I GGWCC 2 cut(s) 531, 556
BmeT110I CYCGRG 2 cut(s) 506, 924
BmgBI CACGTC 1 cut(s) 1590
BmgT120I GGNCC 5 cut(s) 531, 556, 1696, 1697, 2041
BmiI GGNNCC 5 cut(s) 140, 513, 540, 1698, 1708
BmrFI CCNGG 2 cut(s) 160, 1989
BmsI GCATC 3 cut(s) 1036, 1099, 1282
BmtI GCTAGC 1 cut(s) 449
BpiI GAAGAC 1 cut(s) 354
BplI GAGNNNNNCTC 2 cut(s) 1721, 1753
Bpu1102I GCTNAGC 1 cut(s) 323
Bpu14I TTCGAA 1 cut(s) 1285
BpuEI CTTGAG 3 cut(s) 29, 237, 1748
Bsa29I ATCGAT 1 cut(s) 429
BsaJI CCNNGG 4 cut(s) 158, 507, 534, 606
BsaXI ACNNNNNCTCC 2 cut(s) 79, 109
Bsc4I CCNNNNNNNGG 4 cut(s) 159, 367, 907, 1337
Bse1I ACTGG 4 cut(s) 153, 798, 996, 1663
Bse21I CCTNAGG 1 cut(s) 1487
Bse3DI GCAATG 4 cut(s) 244, 275, 918, 1022
BseBI CCWGG 2 cut(s) 160, 1989
BseCI ATCGAT 1 cut(s) 429
BseDI CCNNGG 4 cut(s) 158, 507, 534, 606
BseGI GGATG 3 cut(s) 1114, 1576, 1614
BseLI CCNNNNNNNGG 4 cut(s) 159, 367, 907, 1337
BseMI GCAATG 4 cut(s) 244, 275, 918, 1022
BseMII CTCAG 3 cut(s) 1501, 1610, 2013
BseNI ACTGG 4 cut(s) 153, 798, 996, 1663
BseRI GAGGAG 2 cut(s) 524, 2048
BseSI GKGCMC 1 cut(s) 1700
BseXI GCAGC 3 cut(s) 323, 1458, 1489
BseYI CCCAGC 1 cut(s) 1442
BshFI GGCC 6 cut(s) 396, 811, 1550, 1698, 2018, 2043
BshNI GGYRCC 2 cut(s) 138, 538
BshVI ATCGAT 1 cut(s) 429
BsiHKAI GWGCWC 2 cut(s) 217, 1086
BsiHKCI CYCGRG 2 cut(s) 506, 924
BsiSI CCGG 1 cut(s) 1710
BslFI GGGAC 1 cut(s) 141
BslI CCNNNNNNNGG 4 cut(s) 159, 367, 907, 1337
BsmAI GTCTC 3 cut(s) 130, 1523, 1664
BsmBI CGTCTC 1 cut(s) 130
BsmFI GGGAC 1 cut(s) 141
BsnI GGCC 6 cut(s) 396, 811, 1550, 1698, 2018, 2043
BsoBI CYCGRG 2 cut(s) 506, 924
Bsp119I TTCGAA 1 cut(s) 1285
Bsp120I GGGCCC 1 cut(s) 1696
Bsp1286I GDGCHC 3 cut(s) 217, 1086, 1700
Bsp143I GATC 7 cut(s) 622, 685, 768, 930, 1232, 1597, 1969
Bsp1720I GCTNAGC 1 cut(s) 323
Bsp19I CCATGG 1 cut(s) 606
BspANI GGCC 6 cut(s) 396, 811, 1550, 1698, 2018, 2043
BspCNI CTCAG 3 cut(s) 1500, 1611, 2014
BspDI ATCGAT 1 cut(s) 429
BspHI TCATGA 2 cut(s) 964, 1371
BspLI GGNNCC 5 cut(s) 140, 513, 540, 1698, 1708
BspMI ACCTGC 1 cut(s) 582
BspOI GCTAGC 1 cut(s) 449
BspPI GGATC 3 cut(s) 617, 680, 1240
BspQI GCTCTTC 1 cut(s) 1193
BspT104I TTCGAA 1 cut(s) 1285
BspT107I GGYRCC 2 cut(s) 138, 538
BsrDI GCAATG 4 cut(s) 244, 275, 918, 1022
BsrI ACTGG 4 cut(s) 153, 798, 996, 1663
BssECI CCNNGG 4 cut(s) 158, 507, 534, 606
BssMI GATC 7 cut(s) 622, 685, 768, 930, 1232, 1597, 1969
BssNAI GTATAC 1 cut(s) 739
BssT1I CCWWGG 2 cut(s) 534, 606
Bst1107I GTATAC 1 cut(s) 739
Bst2UI CCWGG 2 cut(s) 160, 1989
Bst4CI ACNGT 4 cut(s) 981, 1004, 1949, 2002
Bst6I CTCTTC 2 cut(s) 900, 1193
BstAPI GCANNNNNTGC 2 cut(s) 317, 1455
BstBI TTCGAA 1 cut(s) 1285
BstC8I GCNNGC 3 cut(s) 447, 1067, 1482
BstDEI CTNAG 5 cut(s) 323, 1487, 1514, 1619, 2022
BstDSI CCRYGG 1 cut(s) 606
BstF5I GGATG 3 cut(s) 1114, 1576, 1614
BstHHI GCGC 1 cut(s) 322
BstKTI GATC 7 cut(s) 625, 688, 771, 933, 1235, 1600, 1972
BstMAI GTCTC 3 cut(s) 130, 1523, 1664
BstMBI GATC 7 cut(s) 622, 685, 768, 930, 1232, 1597, 1969
BstMWI GCNNNNNNNGC 5 cut(s) 317, 1118, 1455, 1757, 2024
BstNI CCWGG 2 cut(s) 160, 1989
BstNSI RCATGY 1 cut(s) 710
BstSCI CCNGG 2 cut(s) 158, 1987
BstSLI GKGCMC 1 cut(s) 1700
BstV1I GCAGC 3 cut(s) 323, 1458, 1489
BstV2I GAAGAC 1 cut(s) 354
BstX2I RGATCY 1 cut(s) 1232
BstXI CCANNNNNNTGG 1 cut(s) 404
BstYI RGATCY 1 cut(s) 1232
BstZ17I GTATAC 1 cut(s) 739
Bsu15I ATCGAT 1 cut(s) 429
Bsu36I CCTNAGG 1 cut(s) 1487
BsuRI GGCC 6 cut(s) 396, 811, 1550, 1698, 2018, 2043
BsuTUI ATCGAT 1 cut(s) 429
BtgI CCRYGG 1 cut(s) 606
BtrI CACGTC 1 cut(s) 1590
BtsCI GGATG 3 cut(s) 1114, 1576, 1614
BtsI GCAGTG 1 cut(s) 1900
BtsIMutI CAGTG 2 cut(s) 1900, 1954
BveI ACCTGC 1 cut(s) 582
Cac8I GCNNGC 3 cut(s) 447, 1067, 1482
CaiI CAGNNNCTG 2 cut(s) 44, 1673
CciI TCATGA 2 cut(s) 964, 1371
CfoI GCGC 1 cut(s) 322
Cfr13I GGNCC 5 cut(s) 531, 556, 1696, 1697, 2041
ClaI ATCGAT 1 cut(s) 429
CseI GACGC 4 cut(s) 112, 251, 566, 1800
Csp6I GTAC 3 cut(s) 139, 539, 1419
CviAII CATG 4 cut(s) 607, 707, 965, 1372
CviQI GTAC 3 cut(s) 139, 539, 1419
DdeI CTNAG 5 cut(s) 323, 1487, 1514, 1619, 2022
DpnI GATC 7 cut(s) 624, 687, 770, 932, 1234, 1599, 1971
DpnII GATC 7 cut(s) 622, 685, 768, 930, 1232, 1597, 1969
DraI TTTAAA 1 cut(s) 496
Eam1104I CTCTTC 2 cut(s) 900, 1193
EarI CTCTTC 2 cut(s) 900, 1193
Eco130I CCWWGG 2 cut(s) 534, 606
Eco147I AGGCCT 1 cut(s) 2018
Eco24I GRGCYC 1 cut(s) 1700
Eco32I GATATC 1 cut(s) 1926
Eco47I GGWCC 2 cut(s) 531, 556
Eco57I CTGAAG 1 cut(s) 1884
Eco81I CCTNAGG 1 cut(s) 1487
Eco88I CYCGRG 2 cut(s) 506, 924
EcoO109I RGGNCCY 1 cut(s) 1697
EcoRI GAATTC 1 cut(s) 875
EcoRII CCWGG 2 cut(s) 158, 1987
EcoRV GATATC 1 cut(s) 1926
EcoT14I CCWWGG 2 cut(s) 534, 606
EcoT38I GRGCYC 1 cut(s) 1700
ErhI CCWWGG 2 cut(s) 534, 606
Esp3I CGTCTC 1 cut(s) 130
FaeI CATG 4 cut(s) 610, 710, 968, 1375
FalI AAGNNNNNCTT 2 cut(s) 863, 895
FaqI GGGAC 1 cut(s) 141
FatI CATG 4 cut(s) 606, 706, 964, 1371
FauNDI CATATG 1 cut(s) 2029
FbaI TGATCA 1 cut(s) 1969
FblI GTMKAC 2 cut(s) 738, 1152
Fnu4HI GCNGC 3 cut(s) 312, 1447, 1478
FokI GGATG 3 cut(s) 1121, 1583, 1621
FriOI GRGCYC 1 cut(s) 1700
Fsp4HI GCNGC 3 cut(s) 312, 1447, 1478
FspBI CTAG 7 cut(s) 339, 419, 446, 456, 948, 1314, 1740
GlaI GCGC 1 cut(s) 321
GluI GCNGC 3 cut(s) 312, 1447, 1478
GsaI CCCAGC 1 cut(s) 1446
HaeIII GGCC 6 cut(s) 396, 811, 1550, 1698, 2018, 2043
HapII CCGG 1 cut(s) 1710
HgaI GACGC 4 cut(s) 112, 251, 566, 1800
HhaI GCGC 1 cut(s) 322
Hin1II CATG 4 cut(s) 610, 710, 968, 1375
Hin6I GCGC 1 cut(s) 320
HinP1I GCGC 1 cut(s) 320
HindIII AAGCTT 1 cut(s) 1678
HpaII CCGG 1 cut(s) 1710
HphI GGTGA 6 cut(s) 142, 611, 695, 890, 1114, 1624
Hpy166II GTNNAC 4 cut(s) 704, 739, 1153, 2005
Hpy8I GTNNAC 4 cut(s) 704, 739, 1153, 2005
HpyAV CCTTC 6 cut(s) 7, 530, 829, 1540, 1710, 1771
HpyCH4III ACNGT 4 cut(s) 981, 1004, 1949, 2002
HpyCH4IV ACGT 2 cut(s) 818, 1589
HpyCH4V TGCA 6 cut(s) 237, 474, 482, 748, 1027, 1667
HpyF10VI GCNNNNNNNGC 5 cut(s) 317, 1118, 1455, 1757, 2024
HpyF3I CTNAG 5 cut(s) 323, 1487, 1514, 1619, 2022
HpySE526I ACGT 2 cut(s) 818, 1589
Hsp92II CATG 4 cut(s) 610, 710, 968, 1375
HspAI GCGC 1 cut(s) 320
KpnI GGTACC 2 cut(s) 142, 542
Ksp22I TGATCA 1 cut(s) 1969
Kzo9I GATC 7 cut(s) 622, 685, 768, 930, 1232, 1597, 1969
LguI GCTCTTC 1 cut(s) 1193
LmnI GCTCC 1 cut(s) 511
Lsp1109I GCAGC 3 cut(s) 323, 1458, 1489
LweI GCATC 3 cut(s) 1036, 1099, 1282
MaeI CTAG 7 cut(s) 339, 419, 446, 456, 948, 1314, 1740
MaeII ACGT 2 cut(s) 818, 1589
MaeIII GTNAC 3 cut(s) 800, 975, 1612
MalI GATC 7 cut(s) 624, 687, 770, 932, 1234, 1599, 1971
MboI GATC 7 cut(s) 622, 685, 768, 930, 1232, 1597, 1969
MboII GAAGA 9 cut(s) 359, 494, 917, 923, 1210, 1268, 1445, 1448, 1920
MflI RGATCY 1 cut(s) 1232
MhlI GDGCHC 3 cut(s) 217, 1086, 1700
MlyI GAGTC 5 cut(s) 50, 889, 1055, 1525, 1609
MmeI TCCRAC 1 cut(s) 1201
MroXI GAANNNNTTC 1 cut(s) 381
MseI TTAA 6 cut(s) 282, 425, 495, 1136, 1655, 1883
MslI CAYNNNNRTG 2 cut(s) 402, 1843
MspA1I CMGCKG 1 cut(s) 314
MspI CCGG 1 cut(s) 1710
MspR9I CCNGG 2 cut(s) 160, 1989
MvaI CCWGG 2 cut(s) 160, 1989
MwoI GCNNNNNNNGC 5 cut(s) 317, 1118, 1455, 1757, 2024
NcoI CCATGG 1 cut(s) 606
NdeI CATATG 1 cut(s) 2029
NdeII GATC 7 cut(s) 622, 685, 768, 930, 1232, 1597, 1969
NheI GCTAGC 1 cut(s) 445
NlaIII CATG 4 cut(s) 610, 710, 968, 1375
NlaIV GGNNCC 5 cut(s) 140, 513, 540, 1698, 1708
NmuCI GTSAC 1 cut(s) 1612
NspI RCATGY 1 cut(s) 710
NspV TTCGAA 1 cut(s) 1285
PagI TCATGA 2 cut(s) 964, 1371
PceI AGGCCT 1 cut(s) 2018
PciI ACATGT 1 cut(s) 706
PciSI GCTCTTC 1 cut(s) 1193
PcsI WCGNNNNNNNCGW 1 cut(s) 922
PdmI GAANNNNTTC 1 cut(s) 381
PfeI GAWTC 8 cut(s) 17, 114, 377, 668, 755, 1282, 1375, 1633
PflFI GACNNNGTC 1 cut(s) 40
PkrI GCNGC 3 cut(s) 313, 1448, 1479
PleI GAGTC 5 cut(s) 49, 889, 1054, 1525, 1609
PpsI GAGTC 5 cut(s) 49, 889, 1054, 1525, 1609
PscI ACATGT 1 cut(s) 706
PsiI TTATAA 1 cut(s) 221
Psp6I CCWGG 2 cut(s) 158, 1987
PspFI CCCAGC 1 cut(s) 1442
PspGI CCWGG 2 cut(s) 158, 1987
PspN4I GGNNCC 5 cut(s) 140, 513, 540, 1698, 1708
PspOMI GGGCCC 1 cut(s) 1696
PspPI GGNCC 5 cut(s) 531, 556, 1696, 1697, 2041
PstNI CAGNNNCTG 2 cut(s) 44, 1673
PsuI RGATCY 1 cut(s) 1232
PsyI GACNNNGTC 1 cut(s) 40
PvuII CAGCTG 1 cut(s) 314
RsaI GTAC 3 cut(s) 140, 540, 1420
RsaNI GTAC 3 cut(s) 139, 539, 1419
RseI CAYNNNNRTG 2 cut(s) 402, 1843
SapI GCTCTTC 1 cut(s) 1193
SaqAI TTAA 6 cut(s) 282, 425, 495, 1136, 1655, 1883
SatI GCNGC 3 cut(s) 312, 1447, 1478
Sau3AI GATC 7 cut(s) 622, 685, 768, 930, 1232, 1597, 1969
Sau96I GGNCC 5 cut(s) 531, 556, 1696, 1697, 2041
ScaI AGTACT 1 cut(s) 1420
SchI GAGTC 5 cut(s) 50, 889, 1055, 1525, 1609
ScrFI CCNGG 2 cut(s) 160, 1989
SduI GDGCHC 3 cut(s) 217, 1086, 1700
SfaNI GCATC 3 cut(s) 1036, 1099, 1282
SfuI TTCGAA 1 cut(s) 1285
SinI GGWCC 2 cut(s) 531, 556
SmiI ATTTAAAT 1 cut(s) 496
SmiMI CAYNNNNRTG 2 cut(s) 402, 1843
SmlI CTYRAG 3 cut(s) 8, 252, 1727
SmoI CTYRAG 3 cut(s) 8, 252, 1727
SpeI ACTAGT 1 cut(s) 947
SseBI AGGCCT 1 cut(s) 2018
SspI AATATT 1 cut(s) 55
SspMI CTAG 7 cut(s) 339, 419, 446, 456, 948, 1314, 1740
StuI AGGCCT 1 cut(s) 2018
StyD4I CCNGG 2 cut(s) 158, 1987
StyI CCWWGG 2 cut(s) 534, 606
SwaI ATTTAAAT 1 cut(s) 496
TaaI ACNGT 4 cut(s) 981, 1004, 1949, 2002
TaiI ACGT 2 cut(s) 821, 1592
TaqI TCGA 3 cut(s) 375, 429, 1285
TatI WGTACW 1 cut(s) 1418
TfiI GAWTC 8 cut(s) 17, 114, 377, 668, 755, 1282, 1375, 1633
Tru1I TTAA 6 cut(s) 282, 425, 495, 1136, 1655, 1883
Tru9I TTAA 6 cut(s) 282, 425, 495, 1136, 1655, 1883
TscAI CASTG 2 cut(s) 1900, 1954
TseFI GTSAC 1 cut(s) 1612
TseI GCWGC 3 cut(s) 311, 1446, 1477
Tsp45I GTSAC 1 cut(s) 1612
TspDTI ATGAA 4 cut(s) 309, 953, 1388, 1900
TspGWI ACGGA 2 cut(s) 1049, 1803
TspRI CASTG 2 cut(s) 1900, 1954
Tth111I GACNNNGTC 1 cut(s) 40
VpaK11BI GGWCC 2 cut(s) 531, 556
XapI RAATTY 9 cut(s) 497, 563, 674, 875, 995, 1209, 1384, 1401, 1410
XbaI TCTAGA 1 cut(s) 1313
XceI RCATGY 1 cut(s) 710
XmiI GTMKAC 2 cut(s) 738, 1152
XmnI GAANNNNTTC 1 cut(s) 381
XspI CTAG 7 cut(s) 339, 419, 446, 456, 948, 1314, 1740
ZrmI AGTACT 1 cut(s) 1420
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.