transcription factor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| bHLH-TF_ACT-like_plant | PF22754 | 58 - 136 | 5.6e-25 | Plant bHLH transcription factor, ACT-like domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 24 |
| AfaI | GTAC | 1 cut(s) | 74 |
| AgsI | TTSAA | 2 cut(s) | 80, 290 |
| AjnI | CCWGG | 1 cut(s) | 232 |
| AluBI | AGCT | 4 cut(s) | 37, 85, 260, 293 |
| AluI | AGCT | 4 cut(s) | 37, 85, 260, 293 |
| Alw26I | GTCTC | 1 cut(s) | 281 |
| AspLEI | GCGC | 1 cut(s) | 25 |
| AsuHPI | GGTGA | 1 cut(s) | 368 |
| AsuII | TTCGAA | 1 cut(s) | 264 |
| BbsI | GAAGAC | 1 cut(s) | 273 |
| BciT130I | CCWGG | 1 cut(s) | 234 |
| BcoDI | GTCTC | 1 cut(s) | 281 |
| BfaI | CTAG | 2 cut(s) | 188, 294 |
| Bme1390I | CCNGG | 1 cut(s) | 234 |
| BmrFI | CCNGG | 1 cut(s) | 234 |
| BmsI | GCATC | 1 cut(s) | 52 |
| BoxI | GACNNNNGTC | 1 cut(s) | 273 |
| BpiI | GAAGAC | 1 cut(s) | 273 |
| BpmI | CTGGAG | 1 cut(s) | 433 |
| Bpu14I | TTCGAA | 1 cut(s) | 264 |
| BsaI | GGTCTC | 1 cut(s) | 281 |
| BsaJI | CCNNGG | 1 cut(s) | 232 |
| Bse1I | ACTGG | 1 cut(s) | 416 |
| Bse3DI | GCAATG | 1 cut(s) | 161 |
| BseBI | CCWGG | 1 cut(s) | 234 |
| BseDI | CCNNGG | 1 cut(s) | 232 |
| BseMI | GCAATG | 1 cut(s) | 161 |
| BseNI | ACTGG | 1 cut(s) | 416 |
| BseRI | GAGGAG | 1 cut(s) | 351 |
| BsgI | GTGCAG | 1 cut(s) | 327 |
| BsmAI | GTCTC | 1 cut(s) | 281 |
| Bso31I | GGTCTC | 1 cut(s) | 281 |
| Bsp119I | TTCGAA | 1 cut(s) | 264 |
| BspQI | GCTCTTC | 1 cut(s) | 75 |
| BspT104I | TTCGAA | 1 cut(s) | 264 |
| BspTNI | GGTCTC | 1 cut(s) | 281 |
| BsrDI | GCAATG | 1 cut(s) | 161 |
| BsrI | ACTGG | 1 cut(s) | 416 |
| BssECI | CCNNGG | 1 cut(s) | 232 |
| Bst2UI | CCWGG | 1 cut(s) | 234 |
| Bst4CI | ACNGT | 3 cut(s) | 11, 178, 314 |
| Bst6I | CTCTTC | 3 cut(s) | 75, 218, 342 |
| BstBI | TTCGAA | 1 cut(s) | 264 |
| BstC8I | GCNNGC | 1 cut(s) | 387 |
| BstHHI | GCGC | 1 cut(s) | 25 |
| BstMAI | GTCTC | 1 cut(s) | 281 |
| BstNI | CCWGG | 1 cut(s) | 234 |
| BstNSI | RCATGY | 1 cut(s) | 29 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 273 |
| BstSCI | CCNGG | 1 cut(s) | 232 |
| BstV2I | GAAGAC | 1 cut(s) | 273 |
| BtsI | GCAGTG | 2 cut(s) | 396, 402 |
| BtsIMutI | CAGTG | 3 cut(s) | 183, 396, 402 |
| Cac8I | GCNNGC | 1 cut(s) | 387 |
| CfoI | GCGC | 1 cut(s) | 25 |
| CseI | GACGC | 1 cut(s) | 377 |
| Csp6I | GTAC | 1 cut(s) | 73 |
| CviAII | CATG | 2 cut(s) | 26, 374 |
| CviJI | RGCY | 5 cut(s) | 37, 85, 260, 293, 401 |
| CviKI_1 | RGCY | 5 cut(s) | 37, 85, 260, 293, 401 |
| CviQI | GTAC | 1 cut(s) | 73 |
| Eam1104I | CTCTTC | 3 cut(s) | 75, 218, 342 |
| EarI | CTCTTC | 3 cut(s) | 75, 218, 342 |
| Eco31I | GGTCTC | 1 cut(s) | 281 |
| EcoRII | CCWGG | 1 cut(s) | 232 |
| FaeI | CATG | 2 cut(s) | 29, 377 |
| FaiI | YATR | 4 cut(s) | 27, 56, 375, 404 |
| FatI | CATG | 2 cut(s) | 25, 373 |
| FspBI | CTAG | 2 cut(s) | 188, 294 |
| FspI | TGCGCA | 1 cut(s) | 24 |
| GlaI | GCGC | 1 cut(s) | 24 |
| GsuI | CTGGAG | 1 cut(s) | 433 |
| HgaI | GACGC | 1 cut(s) | 377 |
| HhaI | GCGC | 1 cut(s) | 25 |
| Hin1II | CATG | 2 cut(s) | 29, 377 |
| Hin6I | GCGC | 1 cut(s) | 23 |
| HinP1I | GCGC | 1 cut(s) | 23 |
| HindIII | AAGCTT | 1 cut(s) | 258 |
| HinfI | GANTC | 1 cut(s) | 109 |
| HphI | GGTGA | 1 cut(s) | 368 |
| Hpy188I | TCNGA | 1 cut(s) | 204 |
| Hpy188III | TCNNGA | 2 cut(s) | 113, 254 |
| HpyAV | CCTTC | 1 cut(s) | 347 |
| HpyCH4III | ACNGT | 3 cut(s) | 11, 178, 314 |
| HpyCH4V | TGCA | 4 cut(s) | 122, 128, 308, 377 |
| Hsp92II | CATG | 2 cut(s) | 29, 377 |
| HspAI | GCGC | 1 cut(s) | 23 |
| LguI | GCTCTTC | 1 cut(s) | 75 |
| LmnI | GCTCC | 1 cut(s) | 414 |
| LpnPI | CCDG | 9 cut(s) | 180, 204, 219, 239, 246, 304, 311, 316, 397 |
| LweI | GCATC | 1 cut(s) | 52 |
| MaeI | CTAG | 2 cut(s) | 188, 294 |
| MaeIII | GTNAC | 5 cut(s) | 5, 30, 149, 172, 321 |
| MboII | GAAGA | 4 cut(s) | 92, 235, 278, 359 |
| MmeI | TCCRAC | 1 cut(s) | 313 |
| MnlI | CCTC | 4 cut(s) | 58, 76, 329, 343 |
| MspR9I | CCNGG | 1 cut(s) | 234 |
| MvaI | CCWGG | 1 cut(s) | 234 |
| NlaIII | CATG | 2 cut(s) | 29, 377 |
| NmuCI | GTSAC | 2 cut(s) | 30, 149 |
| NsbI | TGCGCA | 1 cut(s) | 24 |
| NspI | RCATGY | 1 cut(s) | 29 |
| NspV | TTCGAA | 1 cut(s) | 264 |
| PciSI | GCTCTTC | 1 cut(s) | 75 |
| PfeI | GAWTC | 1 cut(s) | 109 |
| PshAI | GACNNNNGTC | 1 cut(s) | 273 |
| Psp6I | CCWGG | 1 cut(s) | 232 |
| PspGI | CCWGG | 1 cut(s) | 232 |
| RsaI | GTAC | 1 cut(s) | 74 |
| RsaNI | GTAC | 1 cut(s) | 73 |
| SapI | GCTCTTC | 1 cut(s) | 75 |
| ScrFI | CCNGG | 1 cut(s) | 234 |
| SetI | ASST | 9 cut(s) | 39, 50, 87, 99, 238, 262, 295, 323, 358 |
| SfaNI | GCATC | 1 cut(s) | 52 |
| SfuI | TTCGAA | 1 cut(s) | 264 |
| SspMI | CTAG | 2 cut(s) | 188, 294 |
| StyD4I | CCNGG | 1 cut(s) | 232 |
| TaaI | ACNGT | 3 cut(s) | 11, 178, 314 |
| TaqI | TCGA | 1 cut(s) | 264 |
| TatI | WGTACW | 1 cut(s) | 72 |
| TfiI | GAWTC | 1 cut(s) | 109 |
| TscAI | CASTG | 3 cut(s) | 183, 396, 402 |
| TseFI | GTSAC | 2 cut(s) | 30, 149 |
| Tsp45I | GTSAC | 2 cut(s) | 30, 149 |
| TspDTI | ATGAA | 3 cut(s) | 129, 150, 360 |
| TspRI | CASTG | 3 cut(s) | 183, 396, 402 |
| XceI | RCATGY | 1 cut(s) | 29 |
| XspI | CTAG | 2 cut(s) | 188, 294 |