transcription factor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| bHLH-TF_ACT-like_plant | PF22754 | 69 - 147 | 8.7e-25 | Plant bHLH transcription factor, ACT-like domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 102 |
| AfaI | GTAC | 2 cut(s) | 285, 457 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 226 |
| AgsI | TTSAA | 3 cut(s) | 122, 177, 323 |
| AluBI | AGCT | 5 cut(s) | 43, 127, 261, 326, 444 |
| AluI | AGCT | 5 cut(s) | 43, 127, 261, 326, 444 |
| Alw21I | GWGCWC | 1 cut(s) | 18 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 428 |
| ApeKI | GCWGC | 3 cut(s) | 26, 43, 261 |
| AsuC2I | CCSGG | 1 cut(s) | 267 |
| AsuII | TTCGAA | 1 cut(s) | 297 |
| Bbv12I | GWGCWC | 1 cut(s) | 18 |
| BbvI | GCAGC | 3 cut(s) | 30, 38, 248 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 35, 69 |
| BcnI | CCSGG | 1 cut(s) | 267 |
| BfaI | CTAG | 3 cut(s) | 9, 221, 327 |
| BfmI | CTRYAG | 1 cut(s) | 356 |
| BisI | GCNGC | 3 cut(s) | 27, 44, 262 |
| BlsI | GCNGC | 3 cut(s) | 28, 45, 263 |
| Bme1390I | CCNGG | 1 cut(s) | 267 |
| BmrFI | CCNGG | 1 cut(s) | 267 |
| BmsI | GCATC | 2 cut(s) | 116, 391 |
| BpmI | CTGGAG | 1 cut(s) | 466 |
| Bpu14I | TTCGAA | 1 cut(s) | 297 |
| BpuMI | CCSGG | 1 cut(s) | 267 |
| BsaJI | CCNNGG | 1 cut(s) | 265 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 439, 469 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 226 |
| Bse1I | ACTGG | 2 cut(s) | 200, 291 |
| Bse3DI | GCAATG | 1 cut(s) | 159 |
| BseDI | CCNNGG | 1 cut(s) | 265 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 226 |
| BseMI | GCAATG | 1 cut(s) | 159 |
| BseNI | ACTGG | 2 cut(s) | 200, 291 |
| BseRI | GAGGAG | 1 cut(s) | 384 |
| BseXI | GCAGC | 3 cut(s) | 30, 38, 248 |
| BsgI | GTGCAG | 1 cut(s) | 360 |
| BsiHKAI | GWGCWC | 1 cut(s) | 18 |
| BsiSI | CCGG | 1 cut(s) | 267 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 226 |
| Bsp119I | TTCGAA | 1 cut(s) | 297 |
| Bsp1286I | GDGCHC | 1 cut(s) | 18 |
| BspHI | TCATGA | 1 cut(s) | 181 |
| BspMAI | CTGCAG | 1 cut(s) | 360 |
| BspQI | GCTCTTC | 1 cut(s) | 117 |
| BspT104I | TTCGAA | 1 cut(s) | 297 |
| BsrDI | GCAATG | 1 cut(s) | 159 |
| BsrI | ACTGG | 2 cut(s) | 200, 291 |
| BssECI | CCNNGG | 1 cut(s) | 265 |
| Bst4CI | ACNGT | 1 cut(s) | 211 |
| Bst6I | CTCTTC | 2 cut(s) | 117, 294 |
| BstBI | TTCGAA | 1 cut(s) | 297 |
| BstC8I | GCNNGC | 1 cut(s) | 360 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 224 |
| BstSCI | CCNGG | 1 cut(s) | 265 |
| BstSFI | CTRYAG | 1 cut(s) | 356 |
| BstV1I | GCAGC | 3 cut(s) | 30, 38, 248 |
| BtsI | GCAGTG | 1 cut(s) | 429 |
| BtsIMutI | CAGTG | 3 cut(s) | 207, 216, 429 |
| Cac8I | GCNNGC | 1 cut(s) | 360 |
| CaiI | CAGNNNCTG | 1 cut(s) | 428 |
| CciI | TCATGA | 1 cut(s) | 181 |
| CseI | GACGC | 1 cut(s) | 113 |
| Csp6I | GTAC | 2 cut(s) | 284, 456 |
| CviAII | CATG | 3 cut(s) | 74, 182, 464 |
| CviJI | RGCY | 8 cut(s) | 43, 127, 261, 293, 326, 428, 434, 444 |
| CviKI_1 | RGCY | 8 cut(s) | 43, 127, 261, 293, 326, 428, 434, 444 |
| CviQI | GTAC | 2 cut(s) | 284, 456 |
| Eam1104I | CTCTTC | 2 cut(s) | 117, 294 |
| EarI | CTCTTC | 2 cut(s) | 117, 294 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 224 |
| FaeI | CATG | 3 cut(s) | 77, 185, 467 |
| FaiI | YATR | 6 cut(s) | 36, 75, 98, 117, 183, 465 |
| FatI | CATG | 3 cut(s) | 73, 181, 463 |
| FblI | GTMKAC | 1 cut(s) | 102 |
| Fnu4HI | GCNGC | 3 cut(s) | 27, 44, 262 |
| Fsp4HI | GCNGC | 3 cut(s) | 27, 44, 262 |
| FspBI | CTAG | 3 cut(s) | 9, 221, 327 |
| GluI | GCNGC | 3 cut(s) | 27, 44, 262 |
| GsuI | CTGGAG | 1 cut(s) | 466 |
| HapII | CCGG | 1 cut(s) | 267 |
| HgaI | GACGC | 1 cut(s) | 113 |
| Hin1II | CATG | 3 cut(s) | 77, 185, 467 |
| HpaII | CCGG | 1 cut(s) | 267 |
| Hpy166II | GTNNAC | 1 cut(s) | 103 |
| Hpy188I | TCNGA | 3 cut(s) | 237, 253, 353 |
| Hpy188III | TCNNGA | 2 cut(s) | 155, 182 |
| Hpy8I | GTNNAC | 1 cut(s) | 103 |
| HpyAV | CCTTC | 3 cut(s) | 304, 380, 386 |
| HpyCH4III | ACNGT | 1 cut(s) | 211 |
| HpyCH4V | TGCA | 5 cut(s) | 46, 164, 170, 341, 358 |
| Hsp92II | CATG | 3 cut(s) | 77, 185, 467 |
| LguI | GCTCTTC | 1 cut(s) | 117 |
| LmnI | GCTCC | 1 cut(s) | 13 |
| LpnPI | CCDG | 7 cut(s) | 213, 272, 280, 344, 349, 404, 430 |
| Lsp1109I | GCAGC | 3 cut(s) | 30, 38, 248 |
| LweI | GCATC | 2 cut(s) | 116, 391 |
| MaeI | CTAG | 3 cut(s) | 9, 221, 327 |
| MaeIII | GTNAC | 1 cut(s) | 205 |
| MboII | GAAGA | 5 cut(s) | 44, 134, 311, 392, 395 |
| MfeI | CAATTG | 1 cut(s) | 194 |
| MhlI | GDGCHC | 1 cut(s) | 18 |
| MluCI | AATT | 1 cut(s) | 194 |
| MmeI | TCCRAC | 1 cut(s) | 346 |
| MnlI | CCTC | 2 cut(s) | 100, 362 |
| MseI | TTAA | 1 cut(s) | 438 |
| MspI | CCGG | 1 cut(s) | 267 |
| MspR9I | CCNGG | 1 cut(s) | 267 |
| MunI | CAATTG | 1 cut(s) | 194 |
| NciI | CCSGG | 1 cut(s) | 267 |
| NlaIII | CATG | 3 cut(s) | 77, 185, 467 |
| NspV | TTCGAA | 1 cut(s) | 297 |
| PagI | TCATGA | 1 cut(s) | 181 |
| PciSI | GCTCTTC | 1 cut(s) | 117 |
| PkrI | GCNGC | 3 cut(s) | 28, 45, 263 |
| PstI | CTGCAG | 1 cut(s) | 360 |
| PstNI | CAGNNNCTG | 1 cut(s) | 428 |
| RsaI | GTAC | 2 cut(s) | 285, 457 |
| RsaNI | GTAC | 2 cut(s) | 284, 456 |
| SapI | GCTCTTC | 1 cut(s) | 117 |
| SaqAI | TTAA | 1 cut(s) | 438 |
| SatI | GCNGC | 3 cut(s) | 27, 44, 262 |
| ScrFI | CCNGG | 1 cut(s) | 267 |
| SduI | GDGCHC | 1 cut(s) | 18 |
| SetI | ASST | 6 cut(s) | 45, 92, 129, 263, 328, 446 |
| SfaNI | GCATC | 2 cut(s) | 116, 391 |
| SfcI | CTRYAG | 1 cut(s) | 356 |
| SfuI | TTCGAA | 1 cut(s) | 297 |
| Sse9I | AATT | 1 cut(s) | 194 |
| SspMI | CTAG | 3 cut(s) | 9, 221, 327 |
| StyD4I | CCNGG | 1 cut(s) | 265 |
| TaaI | ACNGT | 1 cut(s) | 211 |
| TaqI | TCGA | 1 cut(s) | 297 |
| TasI | AATT | 1 cut(s) | 194 |
| TatI | WGTACW | 1 cut(s) | 283 |
| Tru1I | TTAA | 1 cut(s) | 438 |
| Tru9I | TTAA | 1 cut(s) | 438 |
| TscAI | CASTG | 3 cut(s) | 207, 216, 429 |
| TseI | GCWGC | 3 cut(s) | 26, 43, 261 |
| TspDTI | ATGAA | 1 cut(s) | 393 |
| TspRI | CASTG | 3 cut(s) | 207, 216, 429 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 224 |
| XmiI | GTMKAC | 1 cut(s) | 102 |
| XspI | CTAG | 3 cut(s) | 9, 221, 327 |