Rorug01G0364700

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0001433
Physical Location & Seq
Forward (+)
47955309 .. 47958826
3518 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0364700.1

Sequence Viewer

Length: 1899 bp
ATGATATTTCCTAATCTAAACTGTCAGACAAACTTGAAAAGAAAGCTTGACAGTGGAGAGCTAAGCGCTGAAGGAAGTAATGATGTCTTAACATTGGCGTTAGGGACTCCGGAGCATGGGGGAAGAGTGCGGGGAGTAGGAGGTTTTGTCACTCCCTCTACTTACTTCCACCTCCCTAAACATAGAAAGGAGAGCATAGAAGCTACTGTCAGACTTAGTGTGCAGAAAATATTGTCAGAGGAGAGAGAGAAGATAGTAGAGGAGGCAAGGGAGAAGATACTAGAGGAGGCTAGGGAGGAGATAGTCAGGGAAGCGAGGGAAAAAATTGTTGCAGAGGAGCGGGCTGTGTGGGCGGCCAAGTTTGCTGAACTTGAAGCAAAGATAAATGGAAAAGAGGCTGCAACTATTCACCCACATGTATCTGGCAATGGAAGCTGCTCAATGACAGCTAATGAGATTGCTCAAGAAACGGATAAAGGTCCGTTGGAAGAAGTAGTGAACAATGTGGATGGAGCTAAAATTCTGAGCGTTTTTGAAGAAATGGAAAACAAAACCATCATGTGTAAAAGGAAAGGGACAAAGGTTGTTAAGGGAGGCAGGTTGGATAAAAGTCCTAGGTGCAAGAAAGGGAATGAGTTTCCCAAGTTGCTTGAGAAAGTAGTTGTCAACCGTGAGGAGGTCAATGAGGCTGTTGAAGAAAATGTCAATATGATAGATATCAAGGAGCCGGAGAATGAGGAGGGGGCAGAATATGTGGATTTGACGATGCGTCAACCTACATTAAAGTCAAACGTAGCTGAGGTTGATTGCAAGTTGGCAATAGGTTCTGTTGAACATATTGTTGCTTATGCCACTGTTATGGAGTGCGAGGATCCTTCCCAACTCGTTCATGGCACTCCACTAGGGGATGGTAATGTGCGTGTTTCCATCTATGCCGCGCTTGAGGAGAAAGCAAAAGTGCCATTTCCTGTGAAAGATGAAATTGAAACAGTGAAGCAGGCTATGGGGAGTTGGGTCGCATGGCCTAAACACCTAGTCATAAAATCTGCAGTCAAGAAACCTACCAAGGATAAAGCTGATAAGAAGAAGAAAAGGAAAGAGATAGGGGAAGAGGACTCGGAGATTGAATTTGGCTTGGCCAAATTGGCACCATCGTTGCCAGCTTCATTGAAGATGTTATGTTTGTGGGGTGAGGATGCATTCAAAGATGGGAATACAATCAACTTCTACATGGAGCCTGAAGTGTTTGGATATTCTCGCAAGACATTTATATTGGGAAAAGATGTTAGGCGACTTGCAAGCATGAGGGAAGTAACTGGAACTTGCATTGCTGTGTATCAAAGGTACCTCTATGATAAGTTGAAGGCTTATAAAATGCTGGACATGGTTGCGTTTGTTGACCCTTCACTTATTGGTGCTGTGGGGTGTGGGAATGGAACTGTCAAGGCCCAACACATCAAAGATAGGCTTGTAACTGCTAAACCAGGGCAGATGTTCATGCTGCTATATAACTCAGGTGATCATTGGGTGTTGACACTTGTTGATCCGGAGAAAGGAACTGCCTATTTTATGGACCCGCTGAAAAGACGCTTACCCACAGGAGATTGGATGTCTATCGTGGATACTGCTATGCGTATGTATATTTCTGAAAAGAATAAGCAGAGTCGGAGTTCAGTCCATTGGAAAAATTTGGCTGGCATTCCTCCCCAACCTAGCAACAAGGAGTGCGGGTACTTTATCATGCGATACATGAGAGATATCATTGAGGATAAAGACATGTCATTGTTTCCTTCCAAGTGGGAGAGGAGAGGCAGTAGCCAATACACCCAGGCAGATATTGATCAAGTGCGAAATGAGTGGGGGAAGTTTGTTGTCAACACATATGTGCACGAGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

632

Amino Acids

71.15

Weight (kDa)

6.69

Isoelectric Point (pI)

38.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF8039 PF26133 268 - 347 1.2e-13 Domain of unknown function (DUF8039)
Peptidase_C48 PF02902 502 - 594 1.5e-10 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1371
Acc36I ACCTGC 1 cut(s) 588
Acc65I GGTACC 1 cut(s) 1344
AccB1I GGYRCC 2 cut(s) 1147, 1344
AccBSI CCGCTC 1 cut(s) 340
AccII CGCG 1 cut(s) 938
AccIII TCCGGA 2 cut(s) 109, 1546
AciI CCGC 6 cut(s) 130, 340, 353, 936, 1577, 1728
AclWI GGATC 3 cut(s) 866, 879, 1538
AcoI YGGCCR 2 cut(s) 354, 1137
AcsI RAATTY 3 cut(s) 519, 1127, 1687
AcuI CTGAAG 2 cut(s) 90, 1260
AfaI GTAC 2 cut(s) 1346, 1733
AfeI AGCGCT 1 cut(s) 67
AfiI CCNNNNNNNGG 3 cut(s) 116, 676, 1553
AflIII ACRYGT 2 cut(s) 415, 1776
AhdI GACNNNNNGTC 1 cut(s) 768
AjnI CCWGG 2 cut(s) 1483, 1827
AleI CACNNNNGTG 1 cut(s) 1883
AluBI AGCT 9 cut(s) 46, 61, 203, 435, 449, 515, 797, 1076, 1163
AluI AGCT 9 cut(s) 46, 61, 203, 435, 449, 515, 797, 1076, 1163
Alw21I GWGCWC 1 cut(s) 1890
Alw44I GTGCAC 1 cut(s) 1886
AlwI GGATC 3 cut(s) 866, 879, 1538
Aor13HI TCCGGA 2 cut(s) 109, 1546
Aor51HI AGCGCT 1 cut(s) 67
AoxI GGCC 4 cut(s) 354, 1022, 1137, 1446
ApaLI GTGCAC 1 cut(s) 1886
ApeKI GCWGC 3 cut(s) 398, 435, 1501
ApoI RAATTY 3 cut(s) 519, 1127, 1687
Asp718I GGTACC 1 cut(s) 1344
AspA2I CCTAGG 1 cut(s) 614
AspLEI GCGC 2 cut(s) 68, 940
AspS9I GGNCC 3 cut(s) 479, 1447, 1573
AsuHPI GGTGA 3 cut(s) 401, 1202, 1529
AvaII GGWCC 2 cut(s) 479, 1573
AvrII CCTAGG 1 cut(s) 614
BaeGI GKGCMC 1 cut(s) 1890
BalI TGGCCA 1 cut(s) 1139
BamHI GGATCC 1 cut(s) 871
BanI GGYRCC 2 cut(s) 1147, 1344
BauI CACGAG 1 cut(s) 1889
Bbv12I GWGCWC 1 cut(s) 1890
BbvCI CCTCAGC 1 cut(s) 798
BbvI GCAGC 3 cut(s) 385, 422, 1488
BccI CCATC 6 cut(s) 503, 563, 902, 935, 1159, 1202
BciT130I CCWGG 2 cut(s) 1485, 1829
BciVI GTATCC 1 cut(s) 1615
BclI TGATCA 2 cut(s) 1519, 1840
BfaI CTAG 6 cut(s) 281, 291, 615, 902, 1034, 1713
BfmI CTRYAG 1 cut(s) 1047
BfoI RGCGCY 1 cut(s) 69
BfuAI ACCTGC 1 cut(s) 588
BfuI GTATCC 1 cut(s) 1615
BglI GCCNNNNNGGC 1 cut(s) 1145
BisI GCNGC 5 cut(s) 354, 399, 436, 936, 1502
BlnI CCTAGG 1 cut(s) 614
BlpI GCTNAGC 1 cut(s) 62
BlsI GCNGC 5 cut(s) 355, 400, 437, 937, 1503
Bme1390I CCNGG 2 cut(s) 1485, 1829
Bme18I GGWCC 2 cut(s) 479, 1573
BmeRI GACNNNNNGTC 1 cut(s) 768
BmgT120I GGNCC 3 cut(s) 479, 1447, 1573
BmiI GGNNCC 6 cut(s) 726, 873, 1149, 1236, 1346, 1575
BmrFI CCNGG 2 cut(s) 1485, 1829
BmsI GCATC 2 cut(s) 756, 1186
Bpu10I CCTNAGC 1 cut(s) 798
Bpu1102I GCTNAGC 1 cut(s) 62
BpuEI CTTGAG 3 cut(s) 447, 671, 962
BsaBI GATNNNNATC 3 cut(s) 716, 1613, 1839
BsaJI CCNNGG 4 cut(s) 614, 1065, 1484, 1827
BsaWI WCCGGW 2 cut(s) 109, 1546
BsaXI ACNNNNNCTCC 6 cut(s) 132, 162, 1715, 1745, 1798, 1828
Bsc4I CCNNNNNNNGG 3 cut(s) 116, 676, 1553
Bse1I ACTGG 1 cut(s) 1321
Bse3DI GCAATG 2 cut(s) 433, 1326
Bse8I GATNNNNATC 3 cut(s) 716, 1613, 1839
BseAI TCCGGA 2 cut(s) 109, 1546
BseBI CCWGG 2 cut(s) 1485, 1829
BseDI CCNNGG 4 cut(s) 614, 1065, 1484, 1827
BseGI GGATG 4 cut(s) 514, 913, 1201, 1614
BseJI GATNNNNATC 3 cut(s) 716, 1613, 1839
BseLI CCNNNNNNNGG 3 cut(s) 116, 676, 1553
BseMI GCAATG 2 cut(s) 433, 1326
BseMII CTCAG 3 cut(s) 515, 789, 1527
BseNI ACTGG 1 cut(s) 1321
BseRI GAGGAG 9 cut(s) 254, 275, 299, 311, 350, 689, 752, 959, 1819
BseSI GKGCMC 1 cut(s) 1890
BseXI GCAGC 3 cut(s) 385, 422, 1488
BsgI GTGCAG 1 cut(s) 242
Bsh1236I CGCG 1 cut(s) 938
BshFI GGCC 4 cut(s) 356, 1024, 1139, 1448
BshNI GGYRCC 2 cut(s) 1147, 1344
BsiHKAI GWGCWC 1 cut(s) 1890
BsiSI CCGG 3 cut(s) 110, 728, 1547
BslFI GGGAC 2 cut(s) 118, 589
BslI CCNNNNNNNGG 3 cut(s) 116, 676, 1553
BsmFI GGGAC 2 cut(s) 118, 589
BsmI GAATGC 2 cut(s) 1199, 1698
BsnI GGCC 4 cut(s) 356, 1024, 1139, 1448
Bsp1286I GDGCHC 1 cut(s) 1890
Bsp13I TCCGGA 2 cut(s) 109, 1546
Bsp143I GATC 4 cut(s) 871, 1519, 1543, 1840
Bsp1720I GCTNAGC 1 cut(s) 62
BspACI CCGC 6 cut(s) 130, 340, 353, 936, 1577, 1728
BspANI GGCC 4 cut(s) 356, 1024, 1139, 1448
BspCNI CTCAG 3 cut(s) 516, 790, 1526
BspEI TCCGGA 2 cut(s) 109, 1546
BspFNI CGCG 1 cut(s) 938
BspHI TCATGA 1 cut(s) 1895
BspLI GGNNCC 6 cut(s) 726, 873, 1149, 1236, 1346, 1575
BspMAI CTGCAG 1 cut(s) 1051
BspMI ACCTGC 1 cut(s) 588
BspPI GGATC 3 cut(s) 866, 879, 1538
BspT107I GGYRCC 2 cut(s) 1147, 1344
BsrBI CCGCTC 1 cut(s) 340
BsrDI GCAATG 2 cut(s) 433, 1326
BsrI ACTGG 1 cut(s) 1321
BssECI CCNNGG 4 cut(s) 614, 1065, 1484, 1827
BssMI GATC 4 cut(s) 871, 1519, 1543, 1840
BssSI CACGAG 1 cut(s) 1889
BssT1I CCWWGG 2 cut(s) 614, 1065
Bst2BI CACGAG 1 cut(s) 1889
Bst2UI CCWGG 2 cut(s) 1485, 1829
Bst4CI ACNGT 7 cut(s) 23, 53, 208, 671, 856, 991, 1441
Bst6I CTCTTC 2 cut(s) 118, 1104
BstC8I GCNNGC 5 cut(s) 342, 999, 1161, 1300, 1696
BstDEI CTNAG 5 cut(s) 62, 215, 524, 798, 1513
BstF5I GGATG 4 cut(s) 514, 913, 1201, 1614
BstFNI CGCG 1 cut(s) 938
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 2 cut(s) 68, 940
BstKTI GATC 4 cut(s) 874, 1522, 1546, 1843
BstMBI GATC 4 cut(s) 871, 1519, 1543, 1840
BstMWI GCNNNNNNNGC 4 cut(s) 350, 362, 432, 1145
BstNI CCWGG 2 cut(s) 1485, 1829
BstNSI RCATGY 2 cut(s) 419, 1780
BstSCI CCNGG 2 cut(s) 1483, 1827
BstSFI CTRYAG 1 cut(s) 1047
BstSLI GKGCMC 1 cut(s) 1890
BstUI CGCG 1 cut(s) 938
BstV1I GCAGC 3 cut(s) 385, 422, 1488
BstX2I RGATCY 1 cut(s) 871
BstXI CCANNNNNNTGG 1 cut(s) 859
BstYI RGATCY 1 cut(s) 871
BsuI GTATCC 1 cut(s) 1615
BsuRI GGCC 4 cut(s) 356, 1024, 1139, 1448
BtsCI GGATG 4 cut(s) 514, 913, 1201, 1614
BtsIMutI CAGTG 3 cut(s) 58, 852, 996
BveI ACCTGC 1 cut(s) 588
Cac8I GCNNGC 5 cut(s) 342, 999, 1161, 1300, 1696
CciI TCATGA 1 cut(s) 1895
CfoI GCGC 2 cut(s) 68, 940
Cfr13I GGNCC 3 cut(s) 479, 1447, 1573
CseI GACGC 2 cut(s) 758, 1596
Csp6I GTAC 2 cut(s) 1345, 1732
CviQI GTAC 2 cut(s) 1345, 1732
DdeI CTNAG 5 cut(s) 62, 215, 524, 798, 1513
DpnI GATC 4 cut(s) 873, 1521, 1545, 1842
DpnII GATC 4 cut(s) 871, 1519, 1543, 1840
DriI GACNNNNNGTC 1 cut(s) 768
EaeI YGGCCR 2 cut(s) 354, 1137
Eam1104I CTCTTC 2 cut(s) 118, 1104
Eam1105I GACNNNNNGTC 1 cut(s) 768
EarI CTCTTC 2 cut(s) 118, 1104
Eco130I CCWWGG 2 cut(s) 614, 1065
Eco32I GATATC 2 cut(s) 718, 1759
Eco47I GGWCC 2 cut(s) 479, 1573
Eco47III AGCGCT 1 cut(s) 67
Eco57I CTGAAG 2 cut(s) 90, 1260
EcoRII CCWGG 2 cut(s) 1483, 1827
EcoRV GATATC 2 cut(s) 718, 1759
EcoT14I CCWWGG 2 cut(s) 614, 1065
EcoT22I ATGCAT 1 cut(s) 1201
ErhI CCWWGG 2 cut(s) 614, 1065
FalI AAGNNNNNCTT 2 cut(s) 1452, 1484
FaqI GGGAC 2 cut(s) 118, 589
FauI CCCGC 4 cut(s) 123, 333, 1584, 1721
FauNDI CATATG 1 cut(s) 1882
FbaI TGATCA 2 cut(s) 1519, 1840
Fnu4HI GCNGC 5 cut(s) 354, 399, 436, 936, 1502
FokI GGATG 4 cut(s) 521, 920, 1208, 1621
Fsp4HI GCNGC 5 cut(s) 354, 399, 436, 936, 1502
FspBI CTAG 6 cut(s) 281, 291, 615, 902, 1034, 1713
GlaI GCGC 2 cut(s) 67, 939
GluI GCNGC 5 cut(s) 354, 399, 436, 936, 1502
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 4 cut(s) 356, 1024, 1139, 1448
HapII CCGG 3 cut(s) 110, 728, 1547
HgaI GACGC 2 cut(s) 758, 1596
HhaI GCGC 2 cut(s) 68, 940
Hin6I GCGC 2 cut(s) 66, 938
HinP1I GCGC 2 cut(s) 66, 938
HincII GTYRAC 5 cut(s) 667, 773, 1399, 1533, 1876
HindII GTYRAC 5 cut(s) 667, 773, 1399, 1533, 1876
HindIII AAGCTT 1 cut(s) 44
HinfI GANTC 4 cut(s) 106, 1115, 1663, 1892
HpaII CCGG 3 cut(s) 110, 728, 1547
HphI GGTGA 3 cut(s) 401, 1202, 1529
Hpy166II GTNNAC 7 cut(s) 499, 667, 773, 1399, 1533, 1876, 1888
Hpy188I TCNGA 7 cut(s) 27, 212, 238, 525, 1120, 1648, 1668
Hpy188III TCNNGA 5 cut(s) 110, 464, 1054, 1547, 1896
Hpy8I GTNNAC 7 cut(s) 499, 667, 773, 1399, 1533, 1876, 1888
HpyAV CCTTC 5 cut(s) 65, 885, 1357, 1413, 1800
HpyCH4III ACNGT 7 cut(s) 23, 53, 208, 671, 856, 991, 1441
HpyCH4IV ACGT 1 cut(s) 792
HpyF10VI GCNNNNNNNGC 4 cut(s) 350, 362, 432, 1145
HpyF3I CTNAG 5 cut(s) 62, 215, 524, 798, 1513
HpySE526I ACGT 1 cut(s) 792
HspAI GCGC 2 cut(s) 66, 938
Kpn2I TCCGGA 2 cut(s) 109, 1546
KpnI GGTACC 1 cut(s) 1348
Ksp22I TGATCA 2 cut(s) 1519, 1840
Kzo9I GATC 4 cut(s) 871, 1519, 1543, 1840
LmnI GCTCC 5 cut(s) 112, 337, 512, 724, 1234
Lsp1109I GCAGC 3 cut(s) 385, 422, 1488
LweI GCATC 2 cut(s) 756, 1186
MaeI CTAG 6 cut(s) 281, 291, 615, 902, 1034, 1713
MaeII ACGT 1 cut(s) 792
MaeIII GTNAC 3 cut(s) 148, 1312, 1471
MalI GATC 4 cut(s) 873, 1521, 1545, 1842
MbiI CCGCTC 1 cut(s) 340
MboI GATC 4 cut(s) 871, 1519, 1543, 1840
MflI RGATCY 1 cut(s) 871
MhlI GDGCHC 1 cut(s) 1890
MlsI TGGCCA 1 cut(s) 1139
MluCI AATT 6 cut(s) 324, 519, 981, 1127, 1142, 1687
MluNI TGGCCA 1 cut(s) 1139
MlyI GAGTC 3 cut(s) 100, 1109, 1672
MmeI TCCRAC 3 cut(s) 465, 582, 1646
Mox20I TGGCCA 1 cut(s) 1139
Mph1103I ATGCAT 1 cut(s) 1201
MroI TCCGGA 2 cut(s) 109, 1546
MscI TGGCCA 1 cut(s) 1139
MseI TTAA 3 cut(s) 89, 588, 782
MslI CAYNNNNRTG 4 cut(s) 414, 857, 1331, 1883
Msp20I TGGCCA 1 cut(s) 1139
MspA1I CMGCKG 1 cut(s) 1579
MspI CCGG 3 cut(s) 110, 728, 1547
MspR9I CCNGG 2 cut(s) 1485, 1829
Mva1269I GAATGC 2 cut(s) 1199, 1698
MvaI CCWGG 2 cut(s) 1485, 1829
MvnI CGCG 1 cut(s) 938
MwoI GCNNNNNNNGC 4 cut(s) 350, 362, 432, 1145
NdeI CATATG 1 cut(s) 1882
NdeII GATC 4 cut(s) 871, 1519, 1543, 1840
NlaIV GGNNCC 6 cut(s) 726, 873, 1149, 1236, 1346, 1575
NmuCI GTSAC 1 cut(s) 148
NsiI ATGCAT 1 cut(s) 1201
NspI RCATGY 2 cut(s) 419, 1780
OliI CACNNNNGTG 1 cut(s) 1883
PagI TCATGA 1 cut(s) 1895
PciI ACATGT 2 cut(s) 415, 1776
PctI GAATGC 2 cut(s) 1199, 1698
PkrI GCNGC 5 cut(s) 355, 400, 437, 937, 1503
PleI GAGTC 3 cut(s) 100, 1109, 1671
PpsI GAGTC 3 cut(s) 100, 1109, 1671
PscI ACATGT 2 cut(s) 415, 1776
PsiI TTATAA 1 cut(s) 1371
Psp6I CCWGG 2 cut(s) 1483, 1827
PspGI CCWGG 2 cut(s) 1483, 1827
PspN4I GGNNCC 6 cut(s) 726, 873, 1149, 1236, 1346, 1575
PspPI GGNCC 3 cut(s) 479, 1447, 1573
PstI CTGCAG 1 cut(s) 1051
PsuI RGATCY 1 cut(s) 871
RsaI GTAC 2 cut(s) 1346, 1733
RsaNI GTAC 2 cut(s) 1345, 1732
RseI CAYNNNNRTG 4 cut(s) 414, 857, 1331, 1883
SaqAI TTAA 3 cut(s) 89, 588, 782
SatI GCNGC 5 cut(s) 354, 399, 436, 936, 1502
Sau3AI GATC 4 cut(s) 871, 1519, 1543, 1840
Sau96I GGNCC 3 cut(s) 479, 1447, 1573
SchI GAGTC 3 cut(s) 100, 1109, 1672
ScrFI CCNGG 2 cut(s) 1485, 1829
SduI GDGCHC 1 cut(s) 1890
SfaNI GCATC 2 cut(s) 756, 1186
SfcI CTRYAG 1 cut(s) 1047
SinI GGWCC 2 cut(s) 479, 1573
SmiMI CAYNNNNRTG 4 cut(s) 414, 857, 1331, 1883
SmlI CTYRAG 3 cut(s) 462, 650, 941
SmoI CTYRAG 3 cut(s) 462, 650, 941
Sse9I AATT 6 cut(s) 324, 519, 981, 1127, 1142, 1687
SsiI CCGC 6 cut(s) 130, 340, 353, 936, 1577, 1728
SspI AATATT 1 cut(s) 231
SspMI CTAG 6 cut(s) 281, 291, 615, 902, 1034, 1713
StyD4I CCNGG 2 cut(s) 1483, 1827
StyI CCWWGG 2 cut(s) 614, 1065
TaaI ACNGT 7 cut(s) 23, 53, 208, 671, 856, 991, 1441
TaiI ACGT 1 cut(s) 795
TasI AATT 6 cut(s) 324, 519, 981, 1127, 1142, 1687
TauI GCSGC 2 cut(s) 356, 938
Tru1I TTAA 3 cut(s) 89, 588, 782
Tru9I TTAA 3 cut(s) 89, 588, 782
TscAI CASTG 3 cut(s) 58, 859, 996
TseFI GTSAC 1 cut(s) 148
TseI GCWGC 3 cut(s) 398, 435, 1501
Tsp45I GTSAC 1 cut(s) 148
TspDTI ATGAA 4 cut(s) 878, 993, 1155, 1486
TspGWI ACGGA 2 cut(s) 471, 485
TspRI CASTG 3 cut(s) 58, 859, 996
VneI GTGCAC 1 cut(s) 1886
VpaK11BI GGWCC 2 cut(s) 479, 1573
XapI RAATTY 3 cut(s) 519, 1127, 1687
XceI RCATGY 2 cut(s) 419, 1780
XcmI CCANNNNNNNNNTGG 1 cut(s) 887
XmaJI CCTAGG 1 cut(s) 614
XspI CTAG 6 cut(s) 281, 291, 615, 902, 1034, 1713
Zsp2I ATGCAT 1 cut(s) 1201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.