Transcription factor
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 83 |
| Acc36I | ACCTGC | 2 cut(s) | 83, 224 |
| AccI | GTMKAC | 1 cut(s) | 102 |
| AccII | CGCG | 1 cut(s) | 69 |
| AciI | CCGC | 2 cut(s) | 26, 69 |
| AgsI | TTSAA | 1 cut(s) | 55 |
| AjnI | CCWGG | 1 cut(s) | 105 |
| Alw26I | GTCTC | 1 cut(s) | 164 |
| ApeKI | GCWGC | 2 cut(s) | 86, 89 |
| AspLEI | GCGC | 1 cut(s) | 236 |
| BaeGI | GKGCMC | 1 cut(s) | 212 |
| BbvI | GCAGC | 2 cut(s) | 73, 101 |
| BccI | CCATC | 2 cut(s) | 111, 185 |
| BceAI | ACGGC | 1 cut(s) | 221 |
| BciT130I | CCWGG | 1 cut(s) | 107 |
| BcoDI | GTCTC | 1 cut(s) | 164 |
| BfaI | CTAG | 1 cut(s) | 32 |
| BfmI | CTRYAG | 1 cut(s) | 87 |
| BfuAI | ACCTGC | 2 cut(s) | 83, 224 |
| BisI | GCNGC | 3 cut(s) | 27, 87, 90 |
| BlsI | GCNGC | 3 cut(s) | 28, 88, 91 |
| Bme1390I | CCNGG | 1 cut(s) | 107 |
| BmrFI | CCNGG | 1 cut(s) | 107 |
| BsaI | GGTCTC | 1 cut(s) | 164 |
| BseBI | CCWGG | 1 cut(s) | 107 |
| BseMII | CTCAG | 1 cut(s) | 236 |
| BseSI | GKGCMC | 1 cut(s) | 212 |
| BseXI | GCAGC | 2 cut(s) | 73, 101 |
| BsgI | GTGCAG | 1 cut(s) | 202 |
| Bsh1236I | CGCG | 1 cut(s) | 69 |
| BsmAI | GTCTC | 1 cut(s) | 164 |
| Bso31I | GGTCTC | 1 cut(s) | 164 |
| Bsp1286I | GDGCHC | 1 cut(s) | 212 |
| BspACI | CCGC | 2 cut(s) | 26, 69 |
| BspCNI | CTCAG | 1 cut(s) | 235 |
| BspFNI | CGCG | 1 cut(s) | 69 |
| BspMAI | CTGCAG | 1 cut(s) | 91 |
| BspMI | ACCTGC | 2 cut(s) | 83, 224 |
| BspTNI | GGTCTC | 1 cut(s) | 164 |
| Bst2UI | CCWGG | 1 cut(s) | 107 |
| Bst6I | CTCTTC | 1 cut(s) | 155 |
| BstC8I | GCNNGC | 1 cut(s) | 245 |
| BstDEI | CTNAG | 1 cut(s) | 222 |
| BstFNI | CGCG | 1 cut(s) | 69 |
| BstHHI | GCGC | 1 cut(s) | 236 |
| BstMAI | GTCTC | 1 cut(s) | 164 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 26, 35, 216, 240 |
| BstNI | CCWGG | 1 cut(s) | 107 |
| BstSCI | CCNGG | 1 cut(s) | 105 |
| BstSFI | CTRYAG | 1 cut(s) | 87 |
| BstSLI | GKGCMC | 1 cut(s) | 212 |
| BstUI | CGCG | 1 cut(s) | 69 |
| BstV1I | GCAGC | 2 cut(s) | 73, 101 |
| BtsI | GCAGTG | 1 cut(s) | 210 |
| BtsIMutI | CAGTG | 1 cut(s) | 210 |
| BveI | ACCTGC | 2 cut(s) | 83, 224 |
| Cac8I | GCNNGC | 1 cut(s) | 245 |
| CfoI | GCGC | 1 cut(s) | 236 |
| CsiI | ACCWGGT | 1 cut(s) | 105 |
| CviJI | RGCY | 3 cut(s) | 29, 51, 253 |
| CviKI_1 | RGCY | 3 cut(s) | 29, 51, 253 |
| DdeI | CTNAG | 1 cut(s) | 222 |
| Eam1104I | CTCTTC | 1 cut(s) | 155 |
| EarI | CTCTTC | 1 cut(s) | 155 |
| Eco31I | GGTCTC | 1 cut(s) | 164 |
| EcoRII | CCWGG | 1 cut(s) | 105 |
| FaiI | YATR | 1 cut(s) | 135 |
| FblI | GTMKAC | 1 cut(s) | 102 |
| Fnu4HI | GCNGC | 3 cut(s) | 27, 87, 90 |
| Fsp4HI | GCNGC | 3 cut(s) | 27, 87, 90 |
| FspBI | CTAG | 1 cut(s) | 32 |
| GlaI | GCGC | 1 cut(s) | 235 |
| GluI | GCNGC | 3 cut(s) | 27, 87, 90 |
| HhaI | GCGC | 1 cut(s) | 236 |
| Hin6I | GCGC | 1 cut(s) | 234 |
| HinP1I | GCGC | 1 cut(s) | 234 |
| Hpy166II | GTNNAC | 2 cut(s) | 103, 123 |
| Hpy188I | TCNGA | 1 cut(s) | 225 |
| Hpy8I | GTNNAC | 2 cut(s) | 103, 123 |
| HpyAV | CCTTC | 2 cut(s) | 193, 220 |
| HpyCH4V | TGCA | 4 cut(s) | 89, 192, 219, 243 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 26, 35, 216, 240 |
| HpyF3I | CTNAG | 1 cut(s) | 222 |
| HspAI | GCGC | 1 cut(s) | 234 |
| LpnPI | CCDG | 5 cut(s) | 78, 92, 119, 209, 229 |
| Lsp1109I | GCAGC | 2 cut(s) | 73, 101 |
| MabI | ACCWGGT | 1 cut(s) | 105 |
| MaeI | CTAG | 1 cut(s) | 32 |
| MaeIII | GTNAC | 2 cut(s) | 144, 182 |
| MboII | GAAGA | 1 cut(s) | 142 |
| MhlI | GDGCHC | 1 cut(s) | 212 |
| MluCI | AATT | 3 cut(s) | 60, 77, 130 |
| MnlI | CCTC | 1 cut(s) | 184 |
| MseI | TTAA | 1 cut(s) | 259 |
| MspR9I | CCNGG | 1 cut(s) | 107 |
| MvaI | CCWGG | 1 cut(s) | 107 |
| MvnI | CGCG | 1 cut(s) | 69 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 26, 35, 216, 240 |
| NmuCI | GTSAC | 1 cut(s) | 182 |
| PaqCI | CACCTGC | 1 cut(s) | 83 |
| PkrI | GCNGC | 3 cut(s) | 28, 88, 91 |
| Psp6I | CCWGG | 1 cut(s) | 105 |
| PspGI | CCWGG | 1 cut(s) | 105 |
| PstI | CTGCAG | 1 cut(s) | 91 |
| SaqAI | TTAA | 1 cut(s) | 259 |
| SatI | GCNGC | 3 cut(s) | 27, 87, 90 |
| ScrFI | CCNGG | 1 cut(s) | 107 |
| SduI | GDGCHC | 1 cut(s) | 212 |
| SetI | ASST | 6 cut(s) | 46, 97, 108, 176, 218, 231 |
| SexAI | ACCWGGT | 1 cut(s) | 105 |
| SfcI | CTRYAG | 1 cut(s) | 87 |
| SgeI | CNNG | 9 cut(s) | 44, 80, 105, 118, 119, 181, 208, 228, 256 |
| Sse9I | AATT | 3 cut(s) | 60, 77, 130 |
| SsiI | CCGC | 2 cut(s) | 26, 69 |
| SspMI | CTAG | 1 cut(s) | 32 |
| StyD4I | CCNGG | 1 cut(s) | 105 |
| TasI | AATT | 3 cut(s) | 60, 77, 130 |
| TauI | GCSGC | 1 cut(s) | 29 |
| Tru1I | TTAA | 1 cut(s) | 259 |
| Tru9I | TTAA | 1 cut(s) | 259 |
| TscAI | CASTG | 1 cut(s) | 210 |
| TseFI | GTSAC | 1 cut(s) | 182 |
| TseI | GCWGC | 2 cut(s) | 86, 89 |
| Tsp45I | GTSAC | 1 cut(s) | 182 |
| TspRI | CASTG | 1 cut(s) | 210 |
| XmiI | GTMKAC | 1 cut(s) | 102 |
| XspI | CTAG | 1 cut(s) | 32 |