Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0003960

Physical Location & Seq

Genomic Coordinates Forward (+)

32480136 .. 32482993

Gene Structure 2858 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1258600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2838 bp

ATGGCAGAACAAATTGTATGCTTTGTGATTGACAAGCTAATTCAACTACTCATTACCACAGAAGCAAACCTTTCAAGAGACGTAAGCAAAGAAGTTGGTTTCATAAAAAACGAGCTAGAGAGCATCCGATCATTCCTCAAGGACGCAGATGCTAAGGCGGCAGCAGATGGAGAGACGACAAACGACAGTGTCAAAACTTGGGTCAACCAAGTAAGAGATGCAGCTTTTTCCATTGAAGATGTCATTGATGAATATTTGCTCCGCATCACACGGCACCATCAAGATCCTGGATTCATTCGTTTTTTCCATAAAATTATCCGGTTGGCTAAAAAAACGAGATCACAGGATGCGATAGTTTCGAAAGTTGACCACATGAAAGAATTGGTTCGTGATATTCAGGAAAGAAGAAAAAGATACGAACTCAGTTCCATTGACCAGCAAGGTCGAGATAATGGCGAAAAGACTCTTCCTTGGCATGACCCTCGAGTGGCTTCCCTTTTCATTGAGGAGGCTGAAGTGGTGGGGATTGAATCTGCCAGGAAAGAGCTAACTGATTTGTTGGTAGGAGGAGCGCCGAGACGCGAAGTGATATCTGTGGTTGGCATGGGAGGACTTGGGAAGACCACTCTTGCCAATAAAGTTTATGACAATCACGCGGTGTTGGACCAATTTGATTGCTACGCTTGGGTTACGGTGTCCCAGACATACAAGGTGGAGGATCTTCTGAGGACGGTAGTCAAAATGTTCTGCAGTTCAAGGAAGGAGAATTTCCCAGAGGGAATTGACACAATGGATGAGAAGTCCCTGATCAGAAAATCAAGAGAGTATTTGCAGCAAAAGAGGTATGTTGTTGCGTTTGATGATGTGTGGAGAGTAGATTTTTGGGGGGCTATAGAACATGCTTTACCGGATAATAAAGGCGGACGAATAATGATTACTACAAGGAGTCAAGATGTTGCCCATTTTTGCAAAAAATCTTGTTTTGTTCATGTCCATCACTTGCAACCTCTGCCTCCAAACAAGGCATGGGAATTGTTTTGTAAGAAGGTATTTCAATTTGAATTGGAGGGAAATTGCCCTCCAGAGTTAAAAGATATGTCACTGGAAATCGTTAGAAAGTGCGGAGGACTACCTTTGGCAATTGTTTGCATAGGTGGTCTGCTGTCAACGAAAGTTAAAGTTGTGCATGAATGGCAGAAGTTATACAATAGCTTGAGTTCAGAGTTAGACAGCAATCCCCATCTTACAAGCCTCACAAGAATCCTATCACTCAGCTATCACCATCTACCATATTACCTCAAATCGTGCGTCTTATACTTTGGCATCTTTCCAGAGGACTACTCAATTAATTGCGTAAGATTGATTCGGTTGTGGATTGCTGAAGGGTTTGTAAAATTGAAGAAGGGCAAGACACTGGAAGAGGTTGGAGAGGAATACTTGACTGAGCTAATTCACAGAAGCCTGGTTCAAGTGTCAGAAGTTTACATTGATGGAAAAGCTAGAGAATGTCGAGTTCATGATCTTTTGCGTGAGGTCCTCCTTAAAAAGTGCGTGGATTCATGCTTCTGTCATGTGTTATCAAAAGACGAGTCAGCTTTTAAGCCAAAAACTCGACGTCTCTCAATGGCCATCAGTCCATCTGATGCCTTGGGAAGCATTACAGAGTCTCACATCCGTTCTGTATTTACTTTCAACCAAGAAGAATGGCCCGAGTCTTTTCTCAATACATTGAGGGGAAACTTTAAACTTCTGAAGGTATTGGATTTCATGGATGCTCCAATCAATCAACTTCCGAAATATGTGGGGGATTTGCATCTCTTGACGTACTTAAGCCTGAGGAATACAAAGGTGGAGTTGCTTCCAGATTCCATAGGCAATCTGCAAAACTTAGAAACCCTGGATCTAAAACAGTCTTTGGTGTATGAAATACCAGCCAAGATCAATAAGCTTGTTAAGCTGCGGCATCTTTTGGCCTACTATCGTGACTACAGCATGGAGTTTGGCGTGAATTTCGGAAGAGGAGTGAAGATACATGAAGGTATTGGATGCTTACAAGCTTTGCAAAAACTATACTATGTGGAGGCGAATCATGGAGGGATCAAGCTAATCAAAGAACTGGGAAATTTAAGGCAGCTGCGGAAGTTGGGCCTAAAAAAATTGAAACGTGAAGATGGAAGGGCTCTGTGTGCTGCTATTGAAAAGATGAATCACCTTGAATCTCTAGATTTAACTGCAATAAGTGAAGATGAAGTCCTTGATCTAGAATCCATTTCAACTCCACCAGAACTTATTCGGAGTCTGTACTTGAAGGGGCGTTTAGAGCAGTTGCCAAGTTGGATTTCAAATCTTCAACAACTCGTCAGATTGGGGATTTATTGGTCAAGGTTGAGAGATTCCCCATTGAAAGCCCTTAAAAATCTACCTAATCTGATGGAGCTTCGTTTGGGACAAATGGGATATGACGGCGAACAGCTGCATTTTGAGGAAGGAGGATTTCAGAAACTTAGGACTCTGGAACTCGAGGACATGGAGGGACTAAATTCATTGATTATAGACAATAGGGTTATGCCTCTTCTCCAAGAGTTTTACATTGATCGTTGCCCACAACTGAAGGAGGTGCCATCTGGCATCCACCATCTCCGAAATCTAAGAGATCTTTGGATTTATGGCATGCCGAAGGAGTTTGCACGACATATGGATCCAAATAATGGGCCACATTTTTGGATTGTCAAACATATACGAAAAGTTTGTTTTTGTTACAAGTCTAGCCCGAGATATGGCAAATATGAAACACACTCCTTGTATGATTTCGACTTTTCGTTTTGGTCGAATGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0002376 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009626 GO:0009987 GO:0012501 GO:0016020 GO:0019897 GO:0019898 GO:0023052 GO:0033554 GO:0034050 GO:0036094 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

946

Amino Acids

109.0

Weight (kDa)

7.94

Isoelectric Point (pI)

41.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	5 - 103	5.2e-24	Rx N-terminal domain
NB-ARC	PF00931	183 - 355	3.7e-42	NB-ARC domain
WHD_DRP	PF23559	442 - 511	2.6e-24	Disease resistance protein Winged helix domain
LRR_14	PF23598	557 - 888	6.1e-46	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003960)

Species	Orthologous Gene IDs
malus_domestica	MD00G1097800.v1.1 MD01G1186500.v1.1 MD01G1186600.v1.1 MD01G1186800.v1.1 MD01G1187000.v1.1 MD01G1187100.v1.1 MD07G1258600.v1.1 MD07G1258700.v1.1 MD07G1258800.v1.1 MD07G1258900.v1.1 MD07G1259200.v1.1 MD07G1259300.v1.1
prunus_persica	Prupe.2G283200_v2.0.a1 Prupe.2G283300_v2.0.a1 Prupe.2G283400_v2.0.a1
pyrus_communis	pycom01g19810 pycom01g19820 pycom01g19840 pycom01g19900 pycom07g23170 pycom07g23230 pycom07g23240 pycom07g23250 pycom07g23260
rosa_chinensis	RchiOBHm_Chr1g0375241
rosa_laevigata	RLG00000026676
rosa_multiflora	Rmu_co8330553.1_g000001 Rmu_sc0000554.1_g000032
rosa_roxburghii	Rroxscaffold_4G00282910
rosa_rugosa	Rorug01G0389400
rosa_samantha	Rh1AG400100 Rh1BG364400 Rh1DG395000
rosa_wichuraiana	Rw1G035520

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1618
AccB1I	GGYRCC	2 cut(s)	273, 2617
AccB7I	CCANNNNNTGG	1 cut(s)	2708
AccII	CGCG	2 cut(s)	582, 656
AciI	CCGC	7 cut(s)	158, 262, 656, 921, 1122, 1960, 2137
AclWI	GGATC	6 cut(s)	278, 726, 1908, 2105, 2693, 2706
AcoI	YGGCCR	1 cut(s)	1626
AcsI	RAATTY	4 cut(s)	766, 2008, 2122, 2539
AcuI	CTGAAG	4 cut(s)	534, 1401, 1772, 2630
AcyI	GRCGYC	1 cut(s)	1615
AdeI	CACNNNGTG	1 cut(s)	658
AfaI	GTAC	2 cut(s)	1826, 2303
AfiI	CCNNNNNNNGG	3 cut(s)	487, 2708, 2777
AflII	CTTAAG	1 cut(s)	1828
AjnI	CCWGG	4 cut(s)	286, 536, 1461, 1896
AjuI	GAANNNNNNNTTGG	2 cut(s)	2323, 2355
Alw26I	GTCTC	5 cut(s)	72, 167, 571, 1622, 1671
AlwI	GGATC	6 cut(s)	278, 726, 1908, 2105, 2693, 2706
Ama87I	CYCGRG	4 cut(s)	483, 1709, 2519, 2770
AoxI	GGCC	5 cut(s)	1626, 1706, 1971, 2146, 2711
ApeKI	GCWGC	8 cut(s)	161, 221, 832, 1957, 2131, 2134, 2189, 2473
ApoI	RAATTY	4 cut(s)	766, 2008, 2122, 2539
ArsI	GACNNNNNNTTYG	6 cut(s)	186, 218, 1293, 1325, 1574, 1606
AseI	ATTAAT	1 cut(s)	1347
Asp700I	GAANNNNTTC	2 cut(s)	384, 2289
AspLEI	GCGC	1 cut(s)	574
AspS9I	GGNCC	5 cut(s)	664, 1534, 1707, 2146, 2711
AsuHPI	GGTGA	2 cut(s)	1271, 2201
AsuII	TTCGAA	1 cut(s)	359
AvaI	CYCGRG	4 cut(s)	483, 1709, 2519, 2770
AvaII	GGWCC	2 cut(s)	664, 1534
AxyI	CCTNAGG	1 cut(s)	1835
BalI	TGGCCA	1 cut(s)	1628
BamHI	GGATCC	1 cut(s)	2698
BanI	GGYRCC	2 cut(s)	273, 2617
BanII	GRGCYC	1 cut(s)	2182
BbsI	GAAGAC	1 cut(s)	626
BbvI	GCAGC	8 cut(s)	173, 233, 844, 1944, 2121, 2143, 2176, 2460
BceAI	ACGGC	2 cut(s)	287, 2479
BcgI	CGANNNNNNTGC	2 cut(s)	464, 498
BciT130I	CCWGG	4 cut(s)	288, 538, 1463, 1898
BclI	TGATCA	1 cut(s)	807
BcoDI	GTCTC	5 cut(s)	72, 167, 571, 1622, 1671
BfaI	CTAG	5 cut(s)	116, 1500, 2222, 2261, 2766
BfmI	CTRYAG	3 cut(s)	748, 891, 1987
BfoI	RGCGCY	1 cut(s)	575
BfrI	CTTAAG	1 cut(s)	1828
BglII	AGATCT	1 cut(s)	2653
Bme1390I	CCNGG	4 cut(s)	288, 538, 1463, 1898
Bme18I	GGWCC	2 cut(s)	664, 1534
BmeT110I	CYCGRG	4 cut(s)	483, 1709, 2519, 2770
BmgT120I	GGNCC	5 cut(s)	664, 1534, 1707, 2146, 2711
BmiI	GGNNCC	3 cut(s)	275, 2619, 2700
BmrFI	CCNGG	4 cut(s)	288, 538, 1463, 1898
BmrI	ACTGGG	1 cut(s)	2126
BmuI	ACTGGG	1 cut(s)	2126
BoxI	GACNNNNGTC	1 cut(s)	734
BpiI	GAAGAC	1 cut(s)	626
BplI	GAGNNNNNCTC	2 cut(s)	1325, 1357
BpmI	CTGGAG	1 cut(s)	1065
Bpu10I	CCTNAGC	1 cut(s)	153
Bpu14I	TTCGAA	1 cut(s)	359
BpuEI	CTTGAG	2 cut(s)	122, 1234
BsaBI	GATNNNNATC	1 cut(s)	1812
BsaHI	GRCGYC	1 cut(s)	1615
BsaJI	CCNNGG	3 cut(s)	470, 1647, 1896
BsaWI	WCCGGW	2 cut(s)	318, 907
Bsc4I	CCNNNNNNNGG	3 cut(s)	487, 2708, 2777
Bse1I	ACTGG	3 cut(s)	1107, 1419, 2121
Bse21I	CCTNAGG	1 cut(s)	1835
Bse8I	GATNNNNATC	1 cut(s)	1812
BseBI	CCWGG	4 cut(s)	288, 538, 1463, 1898
BseDI	CCNNGG	3 cut(s)	470, 1647, 1896
BseGI	GGATG	7 cut(s)	123, 352, 799, 1671, 1777, 2051, 2628
BseJI	GATNNNNATC	1 cut(s)	1812
BseLI	CCNNNNNNNGG	3 cut(s)	487, 2708, 2777
BseMII	CTCAG	5 cut(s)	436, 716, 1285, 1434, 1826
BseNI	ACTGG	3 cut(s)	1107, 1419, 2121
BseRI	GAGGAG	3 cut(s)	521, 582, 2034
BseXI	GCAGC	8 cut(s)	173, 233, 844, 1944, 2121, 2143, 2176, 2460
Bsh1236I	CGCG	2 cut(s)	582, 656
BshFI	GGCC	5 cut(s)	1628, 1708, 1973, 2148, 2713
BshNI	GGYRCC	2 cut(s)	273, 2617
BsiHKCI	CYCGRG	4 cut(s)	483, 1709, 2519, 2770
BsiSI	CCGG	2 cut(s)	319, 908
BslFI	GGGAC	4 cut(s)	682, 787, 2460, 2547
BslI	CCNNNNNNNGG	3 cut(s)	487, 2708, 2777
BsmAI	GTCTC	5 cut(s)	72, 167, 571, 1622, 1671
BsmBI	CGTCTC	4 cut(s)	72, 167, 571, 1622
BsmFI	GGGAC	4 cut(s)	682, 787, 2460, 2547
BsmI	GAATGC	1 cut(s)	2836
BsnI	GGCC	5 cut(s)	1628, 1708, 1973, 2148, 2713
BsoBI	CYCGRG	4 cut(s)	483, 1709, 2519, 2770
Bsp119I	TTCGAA	1 cut(s)	359
Bsp1286I	GDGCHC	1 cut(s)	2182
BspACI	CCGC	7 cut(s)	158, 262, 656, 921, 1122, 1960, 2137
BspANI	GGCC	5 cut(s)	1628, 1708, 1973, 2148, 2713
BspCNI	CTCAG	5 cut(s)	435, 717, 1284, 1435, 1827
BspFNI	CGCG	2 cut(s)	582, 656
BspHI	TCATGA	1 cut(s)	1516
BspLI	GGNNCC	3 cut(s)	275, 2619, 2700
BspMAI	CTGCAG	1 cut(s)	752
BspPI	GGATC	6 cut(s)	278, 726, 1908, 2105, 2693, 2706
BspT104I	TTCGAA	1 cut(s)	359
BspT107I	GGYRCC	2 cut(s)	273, 2617
BspTI	CTTAAG	1 cut(s)	1828
BsrI	ACTGG	3 cut(s)	1107, 1419, 2121
BssECI	CCNNGG	3 cut(s)	470, 1647, 1896
BssNI	GRCGYC	1 cut(s)	1615
BssT1I	CCWWGG	2 cut(s)	470, 1647
Bst2UI	CCWGG	4 cut(s)	288, 538, 1463, 1898
Bst4CI	ACNGT	4 cut(s)	188, 694, 733, 1911
Bst6I	CTCTTC	4 cut(s)	471, 1413, 2011, 2577
BstACI	GRCGYC	1 cut(s)	1615
BstAFI	CTTAAG	1 cut(s)	1828
BstAPI	GCANNNNNTGC	1 cut(s)	1009
BstBI	TTCGAA	1 cut(s)	359
BstC8I	GCNNGC	1 cut(s)	2672
BstDEI	CTNAG	9 cut(s)	153, 422, 725, 1271, 1443, 1835, 1888, 2504, 2648
BstF5I	GGATG	7 cut(s)	123, 352, 799, 1671, 1777, 2051, 2628
BstFNI	CGCG	2 cut(s)	582, 656
BstH2I	RGCGCY	1 cut(s)	575
BstHHI	GCGC	1 cut(s)	574
BstMAI	GTCTC	5 cut(s)	72, 167, 571, 1622, 1671
BstMWI	GCNNNNNNNGC	6 cut(s)	158, 1009, 1192, 1954, 2186, 2320
BstNI	CCWGG	4 cut(s)	288, 538, 1463, 1898
BstNSI	RCATGY	2 cut(s)	902, 2674
BstPAI	GACNNNNGTC	1 cut(s)	734
BstSCI	CCNGG	4 cut(s)	286, 536, 1461, 1896
BstSFI	CTRYAG	3 cut(s)	748, 891, 1987
BstUI	CGCG	2 cut(s)	582, 656
BstV1I	GCAGC	8 cut(s)	173, 233, 844, 1944, 2121, 2143, 2176, 2460
BstV2I	GAAGAC	1 cut(s)	626
BstX2I	RGATCY	5 cut(s)	283, 718, 1900, 2653, 2698
BstXI	CCANNNNNNTGG	1 cut(s)	2721
BstYI	RGATCY	5 cut(s)	283, 718, 1900, 2653, 2698
Bsu36I	CCTNAGG	1 cut(s)	1835
BsuRI	GGCC	5 cut(s)	1628, 1708, 1973, 2148, 2713
BtsCI	GGATG	7 cut(s)	123, 352, 799, 1671, 1777, 2051, 2628
BtsIMutI	CAGTG	3 cut(s)	193, 1100, 1412
Cac8I	GCNNGC	1 cut(s)	2672
CciI	TCATGA	1 cut(s)	1516
CfoI	GCGC	1 cut(s)	574
Cfr13I	GGNCC	5 cut(s)	664, 1534, 1707, 2146, 2711
CseI	GACGC	3 cut(s)	152, 588, 1297
Csp6I	GTAC	2 cut(s)	1825, 2302
CviQI	GTAC	2 cut(s)	1825, 2302
DdeI	CTNAG	9 cut(s)	153, 422, 725, 1271, 1443, 1835, 1888, 2504, 2648
DraI	TTTAAA	1 cut(s)	1744
DraIII	CACNNNGTG	1 cut(s)	658
EaeI	YGGCCR	1 cut(s)	1626
Eam1104I	CTCTTC	4 cut(s)	471, 1413, 2011, 2577
EarI	CTCTTC	4 cut(s)	471, 1413, 2011, 2577
EciI	GGCGGA	1 cut(s)	936
Eco130I	CCWWGG	2 cut(s)	470, 1647
Eco24I	GRGCYC	1 cut(s)	2182
Eco32I	GATATC	1 cut(s)	591
Eco47I	GGWCC	2 cut(s)	664, 1534
Eco57I	CTGAAG	4 cut(s)	534, 1401, 1772, 2630
Eco81I	CCTNAGG	1 cut(s)	1835
Eco88I	CYCGRG	4 cut(s)	483, 1709, 2519, 2770
EcoO109I	RGGNCCY	1 cut(s)	1534
EcoRII	CCWGG	4 cut(s)	286, 536, 1461, 1896
EcoRV	GATATC	1 cut(s)	591
EcoT14I	CCWWGG	2 cut(s)	470, 1647
EcoT38I	GRGCYC	1 cut(s)	2182
ErhI	CCWWGG	2 cut(s)	470, 1647
Esp3I	CGTCTC	4 cut(s)	72, 167, 571, 1622
FalI	AAGNNNNNCTT	2 cut(s)	54, 86
FaqI	GGGAC	4 cut(s)	682, 787, 2460, 2547
FauNDI	CATATG	1 cut(s)	2694
FbaI	TGATCA	1 cut(s)	807
FokI	GGATG	7 cut(s)	110, 359, 806, 1658, 1784, 2058, 2615
FriOI	GRGCYC	1 cut(s)	2182
FspBI	CTAG	5 cut(s)	116, 1500, 2222, 2261, 2766
GlaI	GCGC	1 cut(s)	573
GsuI	CTGGAG	1 cut(s)	1065
HaeII	RGCGCY	1 cut(s)	575
HaeIII	GGCC	5 cut(s)	1628, 1708, 1973, 2148, 2713
HapII	CCGG	2 cut(s)	319, 908
HgaI	GACGC	3 cut(s)	152, 588, 1297
HhaI	GCGC	1 cut(s)	574
Hin1I	GRCGYC	1 cut(s)	1615
Hin6I	GCGC	1 cut(s)	572
HinP1I	GCGC	1 cut(s)	572
HincII	GTYRAC	3 cut(s)	205, 367, 1167
HindII	GTYRAC	3 cut(s)	205, 367, 1167
HindIII	AAGCTT	2 cut(s)	1946, 2055
HpaII	CCGG	2 cut(s)	319, 908
HphI	GGTGA	2 cut(s)	1271, 2201
Hpy166II	GTNNAC	4 cut(s)	205, 367, 1167, 1483
Hpy8I	GTNNAC	4 cut(s)	205, 367, 1167, 1483
Hpy99I	CGWCG	1 cut(s)	1617
HpyCH4III	ACNGT	4 cut(s)	188, 694, 733, 1911
HpyCH4IV	ACGT	4 cut(s)	81, 1615, 1823, 2164
HpyF10VI	GCNNNNNNNGC	6 cut(s)	158, 1009, 1192, 1954, 2186, 2320
HpyF3I	CTNAG	9 cut(s)	153, 422, 725, 1271, 1443, 1835, 1888, 2504, 2648
HpySE526I	ACGT	4 cut(s)	81, 1615, 1823, 2164
Hsp92I	GRCGYC	1 cut(s)	1615
HspAI	GCGC	1 cut(s)	572
Ksp22I	TGATCA	1 cut(s)	807
LmnI	GCTCC	4 cut(s)	264, 569, 1780, 2434
Lsp1109I	GCAGC	8 cut(s)	173, 233, 844, 1944, 2121, 2143, 2176, 2460
MaeI	CTAG	5 cut(s)	116, 1500, 2222, 2261, 2766
MaeII	ACGT	4 cut(s)	81, 1615, 1823, 2164
MaeIII	GTNAC	4 cut(s)	688, 1098, 1982, 2756
MfeI	CAATTG	1 cut(s)	1140
MflI	RGATCY	5 cut(s)	283, 718, 1900, 2653, 2698
MhlI	GDGCHC	1 cut(s)	2182
MlsI	TGGCCA	1 cut(s)	1628
MluNI	TGGCCA	1 cut(s)	1628
MlyI	GAGTC	7 cut(s)	457, 955, 1598, 1673, 1721, 2305, 2503
MmeI	TCCRAC	3 cut(s)	642, 1405, 2315
Mox20I	TGGCCA	1 cut(s)	1628
MroXI	GAANNNNTTC	2 cut(s)	384, 2289
MscI	TGGCCA	1 cut(s)	1628
Msp20I	TGGCCA	1 cut(s)	1628
MspA1I	CMGCKG	2 cut(s)	2134, 2473
MspCI	CTTAAG	1 cut(s)	1828
MspI	CCGG	2 cut(s)	319, 908
MspR9I	CCNGG	4 cut(s)	288, 538, 1463, 1898
MunI	CAATTG	1 cut(s)	1140
Mva1269I	GAATGC	1 cut(s)	2836
MvaI	CCWGG	4 cut(s)	288, 538, 1463, 1898
MvnI	CGCG	2 cut(s)	582, 656
MwoI	GCNNNNNNNGC	6 cut(s)	158, 1009, 1192, 1954, 2186, 2320
NdeI	CATATG	1 cut(s)	2694
NlaIV	GGNNCC	3 cut(s)	275, 2619, 2700
NmeAIII	GCCGAG	1 cut(s)	600
NmuCI	GTSAC	2 cut(s)	1098, 1982
NspI	RCATGY	2 cut(s)	902, 2674
NspV	TTCGAA	1 cut(s)	359
PaeI	GCATGC	1 cut(s)	2674
PaeR7I	CTCGAG	2 cut(s)	483, 2519
PagI	TCATGA	1 cut(s)	1516
PcsI	WCGNNNNNNNCGW	1 cut(s)	2825
PctI	GAATGC	1 cut(s)	2836
PdmI	GAANNNNTTC	2 cut(s)	384, 2289
PflFI	GACNNNGTC	1 cut(s)	188
PflMI	CCANNNNNTGG	1 cut(s)	2708
PfoI	TCCNGGA	1 cut(s)	286
PleI	GAGTC	7 cut(s)	457, 954, 1597, 1672, 1720, 2304, 2503
PpsI	GAGTC	7 cut(s)	457, 954, 1597, 1672, 1720, 2304, 2503
PpuMI	RGGWCCY	1 cut(s)	1534
PshAI	GACNNNNGTC	1 cut(s)	734
PshBI	ATTAAT	1 cut(s)	1347
Psp5II	RGGWCCY	1 cut(s)	1534
Psp6I	CCWGG	4 cut(s)	286, 536, 1461, 1896
PspGI	CCWGG	4 cut(s)	286, 536, 1461, 1896
PspN4I	GGNNCC	3 cut(s)	275, 2619, 2700
PspPI	GGNCC	5 cut(s)	664, 1534, 1707, 2146, 2711
PspPPI	RGGWCCY	1 cut(s)	1534
PspXI	VCTCGAGB	2 cut(s)	483, 2519
PsrI	GAACNNNNNNTAC	2 cut(s)	888, 920
PstI	CTGCAG	1 cut(s)	752
PsuI	RGATCY	5 cut(s)	283, 718, 1900, 2653, 2698
PsyI	GACNNNGTC	1 cut(s)	188
PvuII	CAGCTG	2 cut(s)	2134, 2473
RsaI	GTAC	2 cut(s)	1826, 2303
RsaNI	GTAC	2 cut(s)	1825, 2302
Sau96I	GGNCC	5 cut(s)	664, 1534, 1707, 2146, 2711
SchI	GAGTC	7 cut(s)	457, 955, 1598, 1673, 1721, 2305, 2503
ScrFI	CCNGG	4 cut(s)	288, 538, 1463, 1898
SduI	GDGCHC	1 cut(s)	2182
SfcI	CTRYAG	3 cut(s)	748, 891, 1987
Sfr274I	CTCGAG	2 cut(s)	483, 2519
SfuI	TTCGAA	1 cut(s)	359
SinI	GGWCC	2 cut(s)	664, 1534
SlaI	CTCGAG	2 cut(s)	483, 2519
SmlI	CTYRAG	5 cut(s)	137, 483, 1213, 1828, 2519
SmoI	CTYRAG	5 cut(s)	137, 483, 1213, 1828, 2519
SphI	GCATGC	1 cut(s)	2674
SsiI	CCGC	7 cut(s)	158, 262, 656, 921, 1122, 1960, 2137
SspI	AATATT	1 cut(s)	254
SspMI	CTAG	5 cut(s)	116, 1500, 2222, 2261, 2766
StyD4I	CCNGG	4 cut(s)	286, 536, 1461, 1896
StyI	CCWWGG	2 cut(s)	470, 1647
TaaI	ACNGT	4 cut(s)	188, 694, 733, 1911
TaiI	ACGT	4 cut(s)	84, 1618, 1826, 2167
TaqI	TCGA	8 cut(s)	359, 445, 484, 1510, 1612, 2520, 2811, 2828
TatI	WGTACW	1 cut(s)	2301
TauI	GCSGC	2 cut(s)	161, 1963
TscAI	CASTG	3 cut(s)	193, 1107, 1419
TseFI	GTSAC	2 cut(s)	1098, 1982
TseI	GCWGC	8 cut(s)	161, 221, 832, 1957, 2131, 2134, 2189, 2473
Tsp45I	GTSAC	2 cut(s)	1098, 1982
TspGWI	ACGGA	1 cut(s)	1664
TspRI	CASTG	3 cut(s)	193, 1107, 1419
Tth111I	GACNNNGTC	1 cut(s)	188
Van91I	CCANNNNNTGG	1 cut(s)	2708
Vha464I	CTTAAG	1 cut(s)	1828
VpaK11BI	GGWCC	2 cut(s)	664, 1534
VspI	ATTAAT	1 cut(s)	1347
XapI	RAATTY	4 cut(s)	766, 2008, 2122, 2539
XbaI	TCTAGA	2 cut(s)	2221, 2260
XceI	RCATGY	2 cut(s)	902, 2674
XcmI	CCANNNNNNNNNTGG	2 cut(s)	284, 1023
XhoI	CTCGAG	2 cut(s)	483, 2519
XmnI	GAANNNNTTC	2 cut(s)	384, 2289
XspI	CTAG	5 cut(s)	116, 1500, 2222, 2261, 2766
ZraI	GACGTC	1 cut(s)	1616

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.