Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003960

Physical Location & Seq

Genomic Coordinates Reverse (-)

62728618 .. 62731512

Gene Structure 2895 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ59898

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2895 bp

ATGGCTGAATCAGTTGTATGCTTTGTGATCGATAAGTTAATTTCATTTCTCGTCACCACAGAAGCAAAAATCTCGAGAGATGTACACAAGGAAATTTCTTGCATCCGAGATGAGCTCGAGAGCATTCGATCATTCTTGAGGGATGCAGATGCAAAGGCAGCAAGAGAAGGGGAGGTGATCAATATCAATGAAAGCAGCGCAACTTGGGTTAAACAAGTAAGGGAAGCAGCTTATCACATAGAAGATGTCATTGATGAATATTTGCTACGCATCACGAAGAAGCATCAAGAACGTGGATTCCTCGGTCTTCTCCGAAAAGTTACTTGGTTCGTGCAGAAAATGAAACCAGAGGAGGAGATGGCTTTGAAAATCGAGGGTATGAAGACATTGGTTTGTGATGTTAAGGCAAGAAGTGAAAGATATGGCTTTAATTCGACTGAGCAAGGTGGTGAAAGGACTATTAACTCGCGGCGGTGGCATGACCCTCGAATGGCTTCCCTTTTCATTGAGGAAGCCCAAGTTGTGGGTATTGAATCTGCCAGAGATGAGCTGATTACTTGGTTTGTACAAGGAGGAGGAGCAGCATCATCATTATCATCGTCAACGCGTGCTGTGATATCAGTGGTTGGCATGGGAGGACTTGGTAAGACCACCCTTGCCAAGAAAGTCTATGATAACCAAGTGGTGATAGAGCACTTTGACTGCTATGCTTGGATTACAGTGTCACAGTTATACAGGATTGAGGATGTTCTGAGGATGATGATAATGCAATTCTACAAGGCGAGGCAGGAGTATATCCCCCACGGGGTTGATGCAATGGATGAGGAGTCCCTAATCAGAAAATCAAGAGAATATTTACAGCAAAAGAGGTATGTGGTTGTGTTTGATGATGTGTGGAATGTTGATTTCTGGGGGGCTATAGAACATGCTTTACCGGATAATGATAAAGGTGGAAGAATAATGATCACTACCAGGATTAAAGATGTTGCTGATTTTTGCAAAAGGTCTAGTTTTGTTCATGTTCATTATTTGCAACCTCTATCTCCAGACAAGGCATGGGAATTATTTTGTAGAAAGGCATTTCAATTTGATCAATTGGAGGGTAAATGTCCTCCAGAGTTGGAGGGGTTGTCTCTTAGAATGGTTAAAAAATGTGAAGGGTTACCTTTGGCAATTGTTTCTCTAGGTGGTCTTCTGTCAACCAAAGCTAAAGTTTTGTCTGAATGGAAAAAGTTGTACGACAGCCTCAGCTCAGAGTTGGAAAATAATCCCCATCTCTCAAGCCTCACAAGAATCTTATCCCTCAGCTATCATCATCTACCATATTACCTCAAATCCTGTGTTTTATACTTTGGCATATTTCCTGAGGATTACTCTATTAGCTGCATAAGACTAGTACGATTGTGGATAGCTGAAGGCTTTGTGAAAGTGACAAAGGGGAAGACATTGGAGGAGGTTGCAGAGGGATATTTGACTGAGCTAATCCATAGAAGCCTGGTTCAAGTATCAAAAGTTTACATTGATGGAAAAGCCAGAAGCTGCCGAGTTCATGACCTCTTGCGTGAAGTCTTCCTTAGAAAGGCATTGGATTCGAGCTTCTGTCACATGTTATCAGAAGATGACTCTACTTTTACTCCAACCACTCGACGCCTCTCCATAGACAGCAGCCTCTCTGATGCGTTGGGAAGCAAAAGCATCGAACAGTCTCATATCCGTTCTGTTTTTACTTTCAACCAAGATGAATGGCCCAACTACTCTTTTCTCAACACAATCAGTGCAAACTTTAAGCTTCTGAAGGTATTGGATTTTGCAGACGCTCCAATACAGCATCTTCCTAAGTATGTGGGGAGTTTATACTACTTGAGGTACTTAAGCCTACGTAATACAAAGGTGAAGCTGCTGCCAAAATCCATAGCTAAGCTGCAAAATTTAGAAACCCTGGATCTAAAACAGTCTCTTGTGTGTGAAATACCAGCAAAGCTCAATAAGCTTCTTAAGTTGCGACATATTTTGGCCTGCTATTGTGACTACAAGAAAAACTTTAGCATGAGTTACGAACGTGGAGTGATGATAGATGATGGTGTAGGGTGCTTGCTAGCTTTGCAAAAGCTATACCATGTGGATGCAAACCATGGAGGGATCAGGCTAATTCAAGAACTGAGAAAGTTAAGGCAGCTGAGAAAGTTGGGCCTAAAAAACTTGAGATGTGAAGATGGACAGGCTCTATGTGCTTCTATTGAAAATATGAACCACCTTGAATCTCTAGAAGTATGCGCAATGGGCGAGGATGAAGTCCTTGATGTACAGTCCATTTCGACTCCACCAGAATCCATTCGGTTTCTCTACTTGAAGGGGCGTCTAGAGAAGTTACCGAGTTGGATTTCTAAGCTAGAGCATCTAGTCAAGTTGAGGATTTTCTGGTCAAGGTTAAGAGATGACCCACTAAAAGCCCTTCAAAATCTGCCCAACTTGTTGGAGCTTGGACTCTCATACAAGGCATATGACGGAGTGCAGCTGCATTTTGAGGAAGGAGGATTTCAGAAACTGAAGTTGCTAAAACTCAAGCACTTGGAGGGACTAAATTCACTGATTATTGACAATGGGGTTATGCCTCTTCTCCAAGAGCTACAACTTGGGCCTTCACCACAACTGAAGGAGGTTCCCTCTGGAATCCACCACTTGAGAGATCTAAGAACTCTTAGATTTGTTGACATGCCTGAAGCTTTCAGACGTGGAATGGATGGCCAGCATTATTGGGTTGTTGAGCATGTTACGGATGTTCTCTTTAGTTACAAGTTAGGGCCAAGGTGTGACATATATGAAACTCACACACTGCTTCATTCCAATAGTTCTGCACCAGTCCCAACTACGGAACGCATATATTTAGAGCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0002376 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009626 GO:0009987 GO:0012501 GO:0016020 GO:0019897 GO:0019898 GO:0023052 GO:0033554 GO:0034050 GO:0036094 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

964

Amino Acids

110.58

Weight (kDa)

7.93

Isoelectric Point (pI)

47.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	5 - 99	1.4e-20	Rx N-terminal domain
NB-ARC	PF00931	198 - 362	3e-42	NB-ARC domain
WHD_DRP	PF23559	453 - 522	5.9e-23	Disease resistance protein Winged helix domain
LRR_14	PF23598	570 - 902	8.7e-46	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003960)

Species	Orthologous Gene IDs
malus_domestica	MD00G1097800.v1.1 MD01G1186500.v1.1 MD01G1186600.v1.1 MD01G1186800.v1.1 MD01G1187000.v1.1 MD01G1187100.v1.1 MD07G1258600.v1.1 MD07G1258700.v1.1 MD07G1258800.v1.1 MD07G1258900.v1.1 MD07G1259200.v1.1 MD07G1259300.v1.1
prunus_persica	Prupe.2G283200_v2.0.a1 Prupe.2G283300_v2.0.a1 Prupe.2G283400_v2.0.a1
pyrus_communis	pycom01g19810 pycom01g19820 pycom01g19840 pycom01g19900 pycom07g23170 pycom07g23230 pycom07g23240 pycom07g23250 pycom07g23260
rosa_chinensis	RchiOBHm_Chr1g0375241
rosa_laevigata	RLG00000026676
rosa_multiflora	Rmu_co8330553.1_g000001 Rmu_sc0000554.1_g000032
rosa_roxburghii	Rroxscaffold_4G00282910
rosa_rugosa	Rorug01G0389400
rosa_samantha	Rh1AG400100 Rh1BG364400 Rh1DG395000
rosa_wichuraiana	Rw1G035520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2275
AccB7I	CCANNNNNTGG	1 cut(s)	523
AccII	CGCG	2 cut(s)	469, 607
AciI	CCGC	2 cut(s)	469, 472
AclWI	GGATC	2 cut(s)	1950, 2147
AcoI	YGGCCR	1 cut(s)	2743
AcsI	RAATTY	3 cut(s)	93, 1927, 2581
AcuI	CTGAAG	5 cut(s)	1434, 1814, 2567, 2672, 2739
AcyI	GRCGYC	2 cut(s)	1648, 2356
AfaI	GTAC	6 cut(s)	84, 567, 1238, 1398, 1868, 2304
AfiI	CCNNNNNNNGG	5 cut(s)	490, 523, 805, 1579, 2869
AflII	CTTAAG	2 cut(s)	1870, 1994
AflIII	ACRYGT	2 cut(s)	605, 1605
AhlI	ACTAGT	1 cut(s)	1393
AjiI	CACGTC	1 cut(s)	2732
AjnI	CCWGG	3 cut(s)	971, 1494, 1938
AjuI	GAANNNNNNNTTGG	2 cut(s)	307, 339
AloI	GAACNNNNNNTCC	2 cut(s)	282, 314
Alw21I	GWGCWC	2 cut(s)	117, 696
Alw26I	GTCTC	3 cut(s)	1137, 1710, 1959
AlwI	GGATC	2 cut(s)	1950, 2147
AlwNI	CAGNNNCTG	2 cut(s)	1539, 2545
Ama87I	CYCGRG	2 cut(s)	73, 116
AoxI	GGCC	6 cut(s)	1745, 2013, 2188, 2636, 2743, 2801
ApoI	RAATTY	3 cut(s)	93, 1927, 2581
Asp700I	GAANNNNTTC	2 cut(s)	493, 2331
AspLEI	GCGC	2 cut(s)	200, 2276
AspS9I	GGNCC	4 cut(s)	1746, 2188, 2636, 2801
AsuHPI	GGTGA	6 cut(s)	46, 187, 461, 697, 1903, 2634
AsuNHI	GCTAGC	1 cut(s)	2095
AvaI	CYCGRG	2 cut(s)	73, 116
AxyI	CCTNAGG	1 cut(s)	1365
BalI	TGGCCA	1 cut(s)	2745
BanII	GRGCYC	1 cut(s)	117
BbsI	GAAGAC	5 cut(s)	299, 389, 1184, 1448, 1561
Bbv12I	GWGCWC	2 cut(s)	117, 696
BbvCI	CCTCAGC	2 cut(s)	1247, 1304
BccI	CCATC	6 cut(s)	352, 1281, 1517, 2072, 2207, 2735
BcgI	CGANNNNNNTGC	8 cut(s)	54, 88, 467, 501, 1572, 1606, 1678, 1712
BciT130I	CCWGG	3 cut(s)	973, 1496, 1940
BclI	TGATCA	3 cut(s)	177, 963, 1090
BcoDI	GTCTC	3 cut(s)	1137, 1710, 1959
BcuI	ACTAGT	1 cut(s)	1393
BfaI	CTAG	8 cut(s)	1008, 1184, 1394, 2096, 2264, 2360, 2390, 2399
BfmI	CTRYAG	1 cut(s)	918
BfrI	CTTAAG	2 cut(s)	1870, 1994
BglII	AGATCT	1 cut(s)	2686
BlpI	GCTNAGC	1 cut(s)	1917
Bme1390I	CCNGG	3 cut(s)	973, 1496, 1940
BmeT110I	CYCGRG	2 cut(s)	73, 116
BmgBI	CACGTC	1 cut(s)	2732
BmgT120I	GGNCC	4 cut(s)	1746, 2188, 2636, 2801
BmiI	GGNNCC	1 cut(s)	2661
BmrFI	CCNGG	3 cut(s)	973, 1496, 1940
BmtI	GCTAGC	1 cut(s)	2099
BpiI	GAAGAC	5 cut(s)	299, 389, 1184, 1448, 1561
BplI	GAGNNNNNCTC	6 cut(s)	99, 131, 1358, 1390, 2648, 2680
BpmI	CTGGAG	2 cut(s)	1029, 1098
Bpu10I	CCTNAGC	2 cut(s)	1247, 1304
Bpu1102I	GCTNAGC	1 cut(s)	1917
BpuEI	CTTGAG	6 cut(s)	157, 1264, 1882, 2221, 2546, 2701
Bsa29I	ATCGAT	1 cut(s)	30
BsaAI	YACGTR	1 cut(s)	1880
BsaBI	GATNNNNATC	1 cut(s)	182
BsaHI	GRCGYC	2 cut(s)	1648, 2356
BsaJI	CCNNGG	5 cut(s)	301, 802, 1938, 2131, 2804
BsaWI	WCCGGW	1 cut(s)	934
BsaXI	ACNNNNNCTCC	4 cut(s)	1115, 1145, 1618, 1648
Bsc4I	CCNNNNNNNGG	5 cut(s)	490, 523, 805, 1579, 2869
Bse1I	ACTGG	1 cut(s)	2858
Bse21I	CCTNAGG	1 cut(s)	1365
Bse3DI	GCAATG	2 cut(s)	822, 2283
Bse8I	GATNNNNATC	1 cut(s)	182
BseBI	CCWGG	3 cut(s)	973, 1496, 1940
BseCI	ATCGAT	1 cut(s)	30
BseDI	CCNNGG	5 cut(s)	301, 802, 1938, 2131, 2804
BseGI	GGATG	9 cut(s)	102, 148, 751, 762, 826, 2128, 2293, 2746, 2782
BseJI	GATNNNNATC	1 cut(s)	182
BseLI	CCNNNNNNNGG	5 cut(s)	490, 523, 805, 1579, 2869
BseMI	GCAATG	2 cut(s)	822, 2283
BseMII	CTCAG	9 cut(s)	429, 743, 1261, 1266, 1318, 1356, 1467, 2150, 2168
BseNI	ACTGG	1 cut(s)	2858
BseRI	GAGGAG	6 cut(s)	365, 368, 588, 591, 839, 1466
BsgI	GTGCAG	3 cut(s)	353, 2531, 2838
Bsh1236I	CGCG	2 cut(s)	469, 607
BshFI	GGCC	6 cut(s)	1747, 2015, 2190, 2638, 2745, 2803
BshVI	ATCGAT	1 cut(s)	30
BsiHKAI	GWGCWC	2 cut(s)	117, 696
BsiHKCI	CYCGRG	2 cut(s)	73, 116
BsiSI	CCGG	1 cut(s)	935
BslFI	GGGAC	3 cut(s)	814, 2589, 2846
BslI	CCNNNNNNNGG	5 cut(s)	490, 523, 805, 1579, 2869
BsmAI	GTCTC	3 cut(s)	1137, 1710, 1959
BsmFI	GGGAC	3 cut(s)	814, 2589, 2846
BsmI	GAATGC	1 cut(s)	123
BsnI	GGCC	6 cut(s)	1747, 2015, 2190, 2638, 2745, 2803
BsoBI	CYCGRG	2 cut(s)	73, 116
Bsp1286I	GDGCHC	2 cut(s)	117, 696
Bsp1407I	TGTACA	3 cut(s)	82, 565, 2302
Bsp143I	GATC	8 cut(s)	27, 128, 177, 963, 1090, 1942, 2139, 2686
Bsp1720I	GCTNAGC	1 cut(s)	1917
Bsp19I	CCATGG	1 cut(s)	2131
BspACI	CCGC	2 cut(s)	469, 472
BspANI	GGCC	6 cut(s)	1747, 2015, 2190, 2638, 2745, 2803
BspCNI	CTCAG	9 cut(s)	430, 744, 1260, 1265, 1317, 1357, 1468, 2151, 2169
BspDI	ATCGAT	1 cut(s)	30
BspFNI	CGCG	2 cut(s)	469, 607
BspHI	TCATGA	1 cut(s)	1549
BspLI	GGNNCC	1 cut(s)	2661
BspOI	GCTAGC	1 cut(s)	2099
BspPI	GGATC	2 cut(s)	1950, 2147
BspTI	CTTAAG	2 cut(s)	1870, 1994
BsrDI	GCAATG	2 cut(s)	822, 2283
BsrGI	TGTACA	3 cut(s)	82, 565, 2302
BsrI	ACTGG	1 cut(s)	2858
BssECI	CCNNGG	5 cut(s)	301, 802, 1938, 2131, 2804
BssMI	GATC	8 cut(s)	27, 128, 177, 963, 1090, 1942, 2139, 2686
BssNI	GRCGYC	2 cut(s)	1648, 2356
BssT1I	CCWWGG	2 cut(s)	2131, 2804
Bst2UI	CCWGG	3 cut(s)	973, 1496, 1940
Bst4CI	ACNGT	5 cut(s)	721, 729, 1704, 1953, 2307
Bst6I	CTCTTC	1 cut(s)	2619
BstACI	GRCGYC	2 cut(s)	1648, 2356
BstAFI	CTTAAG	2 cut(s)	1870, 1994
BstAUI	TGTACA	3 cut(s)	82, 565, 2302
BstBAI	YACGTR	1 cut(s)	1880
BstC8I	GCNNGC	5 cut(s)	609, 2017, 2093, 2097, 2747
BstDSI	CCRYGG	2 cut(s)	802, 2131
BstEII	GGTNACC	1 cut(s)	1161
BstENI	CCTNNNNNAGG	1 cut(s)	1577
BstF5I	GGATG	9 cut(s)	102, 148, 751, 762, 826, 2128, 2293, 2746, 2782
BstFNI	CGCG	2 cut(s)	469, 607
BstHHI	GCGC	2 cut(s)	200, 2276
BstKTI	GATC	8 cut(s)	30, 131, 180, 966, 1093, 1945, 2142, 2689
BstMAI	GTCTC	3 cut(s)	1137, 1710, 1959
BstMBI	GATC	8 cut(s)	27, 128, 177, 963, 1090, 1942, 2139, 2686
BstMWI	GCNNNNNNNGC	6 cut(s)	158, 475, 1987, 2101, 2228, 2280
BstNI	CCWGG	3 cut(s)	973, 1496, 1940
BstNSI	RCATGY	4 cut(s)	929, 1609, 2716, 2771
BstPI	GGTNACC	1 cut(s)	1161
BstSCI	CCNGG	3 cut(s)	971, 1494, 1938
BstSFI	CTRYAG	1 cut(s)	918
BstSNI	TACGTA	1 cut(s)	1880
BstUI	CGCG	2 cut(s)	469, 607
BstV2I	GAAGAC	5 cut(s)	299, 389, 1184, 1448, 1561
BstX2I	RGATCY	2 cut(s)	1942, 2686
BstXI	CCANNNNNNTGG	1 cut(s)	2473
BstYI	RGATCY	2 cut(s)	1942, 2686
Bsu15I	ATCGAT	1 cut(s)	30
Bsu36I	CCTNAGG	1 cut(s)	1365
BsuRI	GGCC	6 cut(s)	1747, 2015, 2190, 2638, 2745, 2803
BsuTUI	ATCGAT	1 cut(s)	30
BtgI	CCRYGG	2 cut(s)	802, 2131
BtrI	CACGTC	1 cut(s)	2732
BtsCI	GGATG	9 cut(s)	102, 148, 751, 762, 826, 2128, 2293, 2746, 2782
BtsI	GCAGTG	1 cut(s)	2831
BtsIMutI	CAGTG	5 cut(s)	627, 726, 1780, 2585, 2831
Cac8I	GCNNGC	5 cut(s)	609, 2017, 2093, 2097, 2747
CaiI	CAGNNNCTG	2 cut(s)	1539, 2545
CciI	TCATGA	1 cut(s)	1549
CfoI	GCGC	2 cut(s)	200, 2276
Cfr13I	GGNCC	4 cut(s)	1746, 2188, 2636, 2801
ClaI	ATCGAT	1 cut(s)	30
CseI	GACGC	3 cut(s)	1656, 1823, 2345
Csp6I	GTAC	6 cut(s)	83, 566, 1237, 1397, 1867, 2303
CviQI	GTAC	6 cut(s)	83, 566, 1237, 1397, 1867, 2303
DpnI	GATC	8 cut(s)	29, 130, 179, 965, 1092, 1944, 2141, 2688
DpnII	GATC	8 cut(s)	27, 128, 177, 963, 1090, 1942, 2139, 2686
EaeI	YGGCCR	1 cut(s)	2743
Eam1104I	CTCTTC	1 cut(s)	2619
EarI	CTCTTC	1 cut(s)	2619
Ecl136II	GAGCTC	1 cut(s)	115
Eco105I	TACGTA	1 cut(s)	1880
Eco130I	CCWWGG	2 cut(s)	2131, 2804
Eco24I	GRGCYC	1 cut(s)	117
Eco32I	GATATC	1 cut(s)	618
Eco53kI	GAGCTC	1 cut(s)	115
Eco57I	CTGAAG	5 cut(s)	1434, 1814, 2567, 2672, 2739
Eco81I	CCTNAGG	1 cut(s)	1365
Eco88I	CYCGRG	2 cut(s)	73, 116
Eco91I	GGTNACC	1 cut(s)	1161
EcoICRI	GAGCTC	1 cut(s)	115
EcoNI	CCTNNNNNAGG	1 cut(s)	1577
EcoO65I	GGTNACC	1 cut(s)	1161
EcoRII	CCWGG	3 cut(s)	971, 1494, 1938
EcoRV	GATATC	1 cut(s)	618
EcoT14I	CCWWGG	2 cut(s)	2131, 2804
EcoT38I	GRGCYC	1 cut(s)	117
ErhI	CCWWGG	2 cut(s)	2131, 2804
FalI	AAGNNNNNCTT	4 cut(s)	1557, 1589, 2024, 2056
FaqI	GGGAC	3 cut(s)	814, 2589, 2846
FauNDI	CATATG	1 cut(s)	2500
FbaI	TGATCA	3 cut(s)	177, 963, 1090
FokI	GGATG	9 cut(s)	89, 155, 758, 769, 833, 2135, 2300, 2753, 2789
FriOI	GRGCYC	1 cut(s)	117
FspBI	CTAG	8 cut(s)	1008, 1184, 1394, 2096, 2264, 2360, 2390, 2399
FspI	TGCGCA	1 cut(s)	2275
GlaI	GCGC	2 cut(s)	199, 2275
GsuI	CTGGAG	2 cut(s)	1029, 1098
HaeIII	GGCC	6 cut(s)	1747, 2015, 2190, 2638, 2745, 2803
HapII	CCGG	1 cut(s)	935
HgaI	GACGC	3 cut(s)	1656, 1823, 2345
HhaI	GCGC	2 cut(s)	200, 2276
Hin1I	GRCGYC	2 cut(s)	1648, 2356
Hin6I	GCGC	2 cut(s)	198, 2274
HinP1I	GCGC	2 cut(s)	198, 2274
HincII	GTYRAC	3 cut(s)	603, 1200, 2710
HindII	GTYRAC	3 cut(s)	603, 1200, 2710
HindIII	AAGCTT	3 cut(s)	1787, 1988, 2721
HpaII	CCGG	1 cut(s)	935
HphI	GGTGA	6 cut(s)	46, 187, 461, 697, 1903, 2634
Hpy166II	GTNNAC	5 cut(s)	85, 603, 1200, 1516, 2710
Hpy8I	GTNNAC	5 cut(s)	85, 603, 1200, 1516, 2710
Hpy99I	CGWCG	1 cut(s)	1650
HpyAV	CCTTC	9 cut(s)	161, 1151, 1409, 1789, 2344, 2462, 2522, 2647, 2649
HpyCH4III	ACNGT	5 cut(s)	721, 729, 1704, 1953, 2307
HpyCH4IV	ACGT	4 cut(s)	292, 1879, 2059, 2731
HpyF10VI	GCNNNNNNNGC	6 cut(s)	158, 475, 1987, 2101, 2228, 2280
HpySE526I	ACGT	4 cut(s)	292, 1879, 2059, 2731
Hsp92I	GRCGYC	2 cut(s)	1648, 2356
HspAI	GCGC	2 cut(s)	198, 2274
Ksp22I	TGATCA	3 cut(s)	177, 963, 1090
Kzo9I	GATC	8 cut(s)	27, 128, 177, 963, 1090, 1942, 2139, 2686
LmnI	GCTCC	3 cut(s)	578, 1822, 2476
MaeI	CTAG	8 cut(s)	1008, 1184, 1394, 2096, 2264, 2360, 2390, 2399
MaeII	ACGT	4 cut(s)	292, 1879, 2059, 2731
MalI	GATC	8 cut(s)	29, 130, 179, 965, 1092, 1944, 2141, 2688
MboI	GATC	8 cut(s)	27, 128, 177, 963, 1090, 1942, 2139, 2686
MfeI	CAATTG	2 cut(s)	1094, 1173
MflI	RGATCY	2 cut(s)	1942, 2686
MhlI	GDGCHC	2 cut(s)	117, 696
MlsI	TGGCCA	1 cut(s)	2745
MluI	ACGCGT	1 cut(s)	605
MluNI	TGGCCA	1 cut(s)	2745
MlyI	GAGTC	4 cut(s)	836, 1616, 2311, 2478
MmeI	TCCRAC	5 cut(s)	1101, 1239, 1661, 2357, 2454
Mox20I	TGGCCA	1 cut(s)	2745
MroXI	GAANNNNTTC	2 cut(s)	493, 2331
MscI	TGGCCA	1 cut(s)	2745
MslI	CAYNNNNRTG	1 cut(s)	2121
Msp20I	TGGCCA	1 cut(s)	2745
MspA1I	CMGCKG	2 cut(s)	2176, 2515
MspCI	CTTAAG	2 cut(s)	1870, 1994
MspI	CCGG	1 cut(s)	935
MspR9I	CCNGG	3 cut(s)	973, 1496, 1940
MunI	CAATTG	2 cut(s)	1094, 1173
Mva1269I	GAATGC	1 cut(s)	123
MvaI	CCWGG	3 cut(s)	973, 1496, 1940
MvnI	CGCG	2 cut(s)	469, 607
MwoI	GCNNNNNNNGC	6 cut(s)	158, 475, 1987, 2101, 2228, 2280
NcoI	CCATGG	1 cut(s)	2131
NdeI	CATATG	1 cut(s)	2500
NdeII	GATC	8 cut(s)	27, 128, 177, 963, 1090, 1942, 2139, 2686
NheI	GCTAGC	1 cut(s)	2095
NlaIV	GGNNCC	1 cut(s)	2661
NmeAIII	GCCGAG	1 cut(s)	1568
NmuCI	GTSAC	6 cut(s)	52, 723, 1429, 1601, 2024, 2810
NsbI	TGCGCA	1 cut(s)	2275
NspI	RCATGY	4 cut(s)	929, 1609, 2716, 2771
PaeR7I	CTCGAG	2 cut(s)	73, 116
PagI	TCATGA	1 cut(s)	1549
PciI	ACATGT	1 cut(s)	1605
PctI	GAATGC	1 cut(s)	123
PdmI	GAANNNNTTC	2 cut(s)	493, 2331
PfeI	GAWTC	8 cut(s)	8, 297, 533, 1293, 1589, 2258, 2327, 2670
PflMI	CCANNNNNTGG	1 cut(s)	523
PleI	GAGTC	4 cut(s)	835, 1616, 2311, 2478
PpsI	GAGTC	4 cut(s)	835, 1616, 2311, 2478
Ppu21I	YACGTR	1 cut(s)	1880
PscI	ACATGT	1 cut(s)	1605
Psp124BI	GAGCTC	1 cut(s)	117
Psp6I	CCWGG	3 cut(s)	971, 1494, 1938
PspEI	GGTNACC	1 cut(s)	1161
PspGI	CCWGG	3 cut(s)	971, 1494, 1938
PspN4I	GGNNCC	1 cut(s)	2661
PspPI	GGNCC	4 cut(s)	1746, 2188, 2636, 2801
PsrI	GAACNNNNNNTAC	2 cut(s)	915, 947
PstNI	CAGNNNCTG	2 cut(s)	1539, 2545
PsuI	RGATCY	2 cut(s)	1942, 2686
PvuII	CAGCTG	2 cut(s)	2176, 2515
RsaI	GTAC	6 cut(s)	84, 567, 1238, 1398, 1868, 2304
RsaNI	GTAC	6 cut(s)	83, 566, 1237, 1397, 1867, 2303
RseI	CAYNNNNRTG	1 cut(s)	2121
SacI	GAGCTC	1 cut(s)	117
Sau3AI	GATC	8 cut(s)	27, 128, 177, 963, 1090, 1942, 2139, 2686
Sau96I	GGNCC	4 cut(s)	1746, 2188, 2636, 2801
SchI	GAGTC	4 cut(s)	836, 1616, 2311, 2478
ScrFI	CCNGG	3 cut(s)	973, 1496, 1940
SduI	GDGCHC	2 cut(s)	117, 696
SfcI	CTRYAG	1 cut(s)	918
Sfr274I	CTCGAG	2 cut(s)	73, 116
SlaI	CTCGAG	2 cut(s)	73, 116
SmiMI	CAYNNNNRTG	1 cut(s)	2121
SnaBI	TACGTA	1 cut(s)	1880
SpeI	ACTAGT	1 cut(s)	1393
SsiI	CCGC	2 cut(s)	469, 472
SspI	AATATT	2 cut(s)	260, 854
SspMI	CTAG	8 cut(s)	1008, 1184, 1394, 2096, 2264, 2360, 2390, 2399
SstI	GAGCTC	1 cut(s)	117
StyD4I	CCNGG	3 cut(s)	971, 1494, 1938
StyI	CCWWGG	2 cut(s)	2131, 2804
TaaI	ACNGT	5 cut(s)	721, 729, 1704, 1953, 2307
TaiI	ACGT	4 cut(s)	295, 1882, 2062, 2734
TaqII	GACCGA	1 cut(s)	293
TatI	WGTACW	3 cut(s)	82, 565, 2302
TauI	GCSGC	1 cut(s)	472
TfiI	GAWTC	8 cut(s)	8, 297, 533, 1293, 1589, 2258, 2327, 2670
TscAI	CASTG	5 cut(s)	627, 726, 1780, 2592, 2838
TseFI	GTSAC	6 cut(s)	52, 723, 1429, 1601, 2024, 2810
Tsp45I	GTSAC	6 cut(s)	52, 723, 1429, 1601, 2024, 2810
TspGWI	ACGGA	4 cut(s)	1703, 2520, 2789, 2885
TspRI	CASTG	5 cut(s)	627, 726, 1780, 2592, 2838
Van91I	CCANNNNNTGG	1 cut(s)	523
Vha464I	CTTAAG	2 cut(s)	1870, 1994
XagI	CCTNNNNNAGG	1 cut(s)	1577
XapI	RAATTY	3 cut(s)	93, 1927, 2581
XbaI	TCTAGA	2 cut(s)	2263, 2359
XceI	RCATGY	4 cut(s)	929, 1609, 2716, 2771
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1053
XhoI	CTCGAG	2 cut(s)	73, 116
XmnI	GAANNNNTTC	2 cut(s)	493, 2331
XspI	CTAG	8 cut(s)	1008, 1184, 1394, 2096, 2264, 2360, 2390, 2399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.