Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0003960

Physical Location & Seq

Genomic Coordinates Reverse (-)

63269615 .. 63272516

Gene Structure 2902 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G035520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2796 bp

ATGGCTGAATCAGTTGTATGCTTTGTGATCGATAAGTTAATTTCATTTCTCGTCACCACAGAAGCAAAAATCTCGAGAGATGTACACAAGGAAATTTCTTGCATCCGAGATGAGCTCGAGAGCATTCGATCATTCTTGAGGGATGCAGATGCAAAGGCAGCAAGAGAAGGGGAGGTGATCAATATCAATGAAAGCAGCGCAACTTGGGTTAAACAAGTAAGGGAAGCAGCTTATCACATAGAAGATGTCATTGATGAATATTTGCTACGCATCACGAAGAAGCATCAAGAACGTGGATTCCTCGGTCTTCTCCGAAAAGTTACTTGGTTCGTGCAGAAAATGAAACCAGAGGAGGAGATGGCTTTGAAAATCGAGGGTATGAAGACATTGGTTTGTGATGTTAAGGCAAGAAGTGAAAGATATGGCTTTAATTCGACTGAGCAAGGTGGTGAAAGGACTATTAACTCGCGGCGGTGGCATGACCCTCGAATGGCTTCCCTTTTCATTGAGGAAGCCCAAGTTGTGGGTATTGAATCTGCCAGAGATGAGCTGATTACTTGGTTTGTACTTTTGGTTGGCATGGGAGGACTTGGTAAGACCACCCTTGCCAAGAAAGTCTATGATAACCAAGTGGTGATAGAGCACTTTGACTGCTATGCTTGGATTACAGTGTCACAGTTATACAGGATTGAGGATGTTCTGAGGATGATGATAATGCAATTCTACAAGGCGAGGCAGGAGTATATCCCCGACGGGGTTGATGCAATGGATGAGGAGTCCCTAATCAGAAAATCAAGAGAATATTTACAGCAAAAGAGGTATGTGGTTGTGTTTGATGATGTGTGGAATGTTGATTTCTGGGGGGCTATAGAACATGCTTTACCGGATAATGATAAAGGTGGAAGAATAATGATCACTACCCGGATTAAAGATGTTGCTGATTTTTGCAAAAGGTCTAGTTTTGTTCATGTTCATTATTTGCAACCTCTATCTCCAGACAAGGCATGGGAATTATTTTGTAGAAAGGCATTTCAATTTGATCAATGGGAGGGTAAATGTCCTCCAGAGTTGGAGGGGTTGTCTCGTAGAATGGTTAAAAAATGTGAAGGGTTACCTTTGGCAATTGTTTCTCTAGGTGGTCTTCTGTCAACCAAAGCTAAAGTTTTGTCTGAATGGAAAAAGTTGTACGACAGCCTCAGCTCAGAGTTGGAAAGTAATCCCCATCTCTCAAGCCTCACAAGAATCTTATCCCTCAGCTATCATCATCTACCATATTACCTCAAATCCTGTGTTTTATACTTTGGCATATTTCCTGAGGATTACTCTATTAGCTGCATAAGACTAGTACGATTGTGGATAGCTGAAGGCTTTGTGAAAGTGACAAAGGGGAAGACATTGGAGGAGGTTGCAGAGGGATATTTGACTGAGCTAATCCATAGAAGCCTGGTTCAAGTATCAACAGTTTACATTGATGGAAAAGCCAGAAGTTGCCGAGTTCATGACCTCTTGCGTGAAGTCTTCCTTAGAAAGGCATTGGATTCGAGCTTCTGTCACATGTTATCAGAAGATGAGTCTACTTTTACTCCAACCACTCGACGCCTCTCCATAGACAGCAGCCTCTCTGATGCGTTGGGAAGCATAAGCATCGAACAGTCTCATATCCGTTCTGTTTTTACTTTCAACCGAGATGAATGGCCCAACTACTCTTTTCTCAACACAATCAGTGCAAACTTTAAGCTTCTGAAGGTATTGGATTTTGCAGACGCTCCAATACAGCATCTTCCTAAGTATGTGGGGAGTTTATACTACTTGAGGTACTTAAGCCTACGTAATACAAAGGTGAAGCTGCTGCCAAAATCCATAGCTAAGCTGCAAAATTTGGAAACCCTGGATCTAAAACAGTCTCTTGTGTGTGAAATACCAGCAAAGCTCAATAAGCTTCTTAACATGAGTTACGAACGTGGAGTGATGATAAATGATGGTGTAGGGTGCTTACTAGCTTTGCAAAAGCTATACCATGTGGATGCAAACCATGGAGGGATCAGGCTAATTCAAGAACTGAGAAAGTTAAGGCAGCTGAGAAAGTTAGGCCTAAAGAACTTGAGAAGTGAAGATGGACAGGCTCTTTGTGCTTCTATTGAAAACATGAACCTCCTTGAATCTCTAGAAGTATGCGCAATGAGCGAGGATGAAGTCCTTGATGTACAGTACATTTCAACTCCACCAGAATCCATTCGGTTTCTCTACTTGAAGGGGCGTCTAGAGAAGTTACCGAGTTGGATTTCTAAGCTAGAGCATCTAGTCAAGTTGAGGATTTTCTGGTCAAGGTTAAGAGATGACCCACTAAAAGCCCTTCAAAATCTGCCCAACTTGTTGGAGCTTGGACTCTCATACAAGGCATATGACGGAGTGCAGCTGCATTTTGAGGAAGGAGGATTTCAGAAACTGAAGTTGCTAAAACTCAAGCACTTGGAGGGACTAAATTCACTGATTATTGACAATGGGGTTATGCCTCTTCTCCAAGAGCTACAACTTGGGCCTTCACCACAACTGAAGGAGGTTCCCTCTGGAATCCACCACTTGAGAGATCTAAGAACTCTTAGATTTGTTGACATGCCTGAAGCTTTCAGACGTGGAATGGATGGCCAGCATTATTGGATTGTAGAGCATGTTACGGATGTTCTCTTTAGTTACAAGCTCGGGCCGAGGTGTGACATATATGAAACTCACACACTGCTTCATTCCAATAGTTCTGCACCAGTCCCAACTAAGGAACGCATATATTTAGAGCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0002376 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009626 GO:0009987 GO:0012501 GO:0016020 GO:0019897 GO:0019898 GO:0023052 GO:0033554 GO:0034050 GO:0036094 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944 GO:0097159 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

931

Amino Acids

107.29

Weight (kDa)

7.34

Isoelectric Point (pI)

48.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	5 - 99	1.3e-20	Rx N-terminal domain
NB-ARC	PF00931	188 - 345	3.9e-41	NB-ARC domain
WHD_DRP	PF23559	436 - 505	1e-22	Disease resistance protein Winged helix domain
LRR_14	PF23598	553 - 869	3.5e-46	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003960)

Species	Orthologous Gene IDs
malus_domestica	MD00G1097800.v1.1 MD01G1186500.v1.1 MD01G1186600.v1.1 MD01G1186800.v1.1 MD01G1187000.v1.1 MD01G1187100.v1.1 MD07G1258600.v1.1 MD07G1258700.v1.1 MD07G1258800.v1.1 MD07G1258900.v1.1 MD07G1259200.v1.1 MD07G1259300.v1.1
prunus_persica	Prupe.2G283200_v2.0.a1 Prupe.2G283300_v2.0.a1 Prupe.2G283400_v2.0.a1
pyrus_communis	pycom01g19810 pycom01g19820 pycom01g19840 pycom01g19900 pycom07g23170 pycom07g23230 pycom07g23240 pycom07g23250 pycom07g23260
rosa_chinensis	RchiOBHm_Chr1g0375241
rosa_laevigata	RLG00000026676
rosa_multiflora	Rmu_co8330553.1_g000001 Rmu_sc0000554.1_g000032
rosa_roxburghii	Rroxscaffold_4G00282910
rosa_rugosa	Rorug01G0389400
rosa_samantha	Rh1AG400100 Rh1BG364400 Rh1DG395000
rosa_wichuraiana	Rw1G035520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2176
AccB7I	CCANNNNNTGG	1 cut(s)	523
AccI	GTMKAC	1 cut(s)	1574
AccII	CGCG	1 cut(s)	469
AciI	CCGC	2 cut(s)	469, 472
AclWI	GGATC	2 cut(s)	1899, 2048
AcoI	YGGCCR	1 cut(s)	2644
AcsI	RAATTY	3 cut(s)	93, 1876, 2482
AcuI	CTGAAG	5 cut(s)	1383, 1763, 2468, 2573, 2640
AcyI	GRCGYC	2 cut(s)	1597, 2257
AfaI	GTAC	7 cut(s)	84, 567, 1187, 1347, 1817, 2205, 2210
AfiI	CCNNNNNNNGG	5 cut(s)	490, 523, 754, 1528, 2770
AflII	CTTAAG	1 cut(s)	1819
AflIII	ACRYGT	1 cut(s)	1554
AhlI	ACTAGT	1 cut(s)	1342
AjiI	CACGTC	1 cut(s)	2633
AjnI	CCWGG	2 cut(s)	1443, 1887
AjuI	GAANNNNNNNTTGG	2 cut(s)	307, 339
AloI	GAACNNNNNNTCC	2 cut(s)	282, 314
Alw21I	GWGCWC	2 cut(s)	117, 645
Alw26I	GTCTC	3 cut(s)	1086, 1659, 1908
AlwI	GGATC	2 cut(s)	1899, 2048
AlwNI	CAGNNNCTG	1 cut(s)	2446
Ama87I	CYCGRG	3 cut(s)	73, 116, 2699
AoxI	GGCC	5 cut(s)	1694, 2089, 2537, 2644, 2702
ApoI	RAATTY	3 cut(s)	93, 1876, 2482
ArsI	GACNNNNNNTTYG	2 cut(s)	2109, 2141
Asp700I	GAANNNNTTC	2 cut(s)	493, 2232
AspLEI	GCGC	2 cut(s)	200, 2177
AspS9I	GGNCC	3 cut(s)	1695, 2537, 2702
AsuC2I	CCSGG	1 cut(s)	922
AsuHPI	GGTGA	6 cut(s)	46, 187, 461, 646, 1852, 2535
AvaI	CYCGRG	3 cut(s)	73, 116, 2699
AxyI	CCTNAGG	1 cut(s)	1314
BalI	TGGCCA	1 cut(s)	2646
BanII	GRGCYC	1 cut(s)	117
BbsI	GAAGAC	5 cut(s)	299, 389, 1133, 1397, 1510
Bbv12I	GWGCWC	2 cut(s)	117, 645
BbvCI	CCTCAGC	2 cut(s)	1196, 1253
BccI	CCATC	6 cut(s)	352, 1230, 1466, 1973, 2108, 2636
BcgI	CGANNNNNNTGC	8 cut(s)	54, 88, 467, 501, 1521, 1555, 1627, 1661
BciT130I	CCWGG	2 cut(s)	1445, 1889
BclI	TGATCA	3 cut(s)	177, 912, 1039
BcnI	CCSGG	1 cut(s)	922
BcoDI	GTCTC	3 cut(s)	1086, 1659, 1908
BcuI	ACTAGT	1 cut(s)	1342
BfaI	CTAG	8 cut(s)	957, 1133, 1343, 1997, 2165, 2261, 2291, 2300
BfmI	CTRYAG	1 cut(s)	867
BfrI	CTTAAG	1 cut(s)	1819
BglII	AGATCT	1 cut(s)	2587
BlpI	GCTNAGC	1 cut(s)	1866
Bme1390I	CCNGG	3 cut(s)	922, 1445, 1889
BmeT110I	CYCGRG	3 cut(s)	73, 116, 2699
BmgBI	CACGTC	1 cut(s)	2633
BmgT120I	GGNCC	3 cut(s)	1695, 2537, 2702
BmiI	GGNNCC	1 cut(s)	2562
BmrFI	CCNGG	3 cut(s)	922, 1445, 1889
BpiI	GAAGAC	5 cut(s)	299, 389, 1133, 1397, 1510
BplI	GAGNNNNNCTC	6 cut(s)	99, 131, 1307, 1339, 2549, 2581
BpmI	CTGGAG	2 cut(s)	978, 1047
Bpu10I	CCTNAGC	2 cut(s)	1196, 1253
Bpu1102I	GCTNAGC	1 cut(s)	1866
BpuEI	CTTGAG	6 cut(s)	157, 1213, 1831, 2122, 2447, 2602
BpuMI	CCSGG	1 cut(s)	922
Bsa29I	ATCGAT	1 cut(s)	30
BsaAI	YACGTR	1 cut(s)	1829
BsaBI	GATNNNNATC	1 cut(s)	182
BsaHI	GRCGYC	2 cut(s)	1597, 2257
BsaJI	CCNNGG	4 cut(s)	301, 1887, 2032, 2705
BsaWI	WCCGGW	1 cut(s)	883
BsaXI	ACNNNNNCTCC	4 cut(s)	1064, 1094, 1567, 1597
Bsc4I	CCNNNNNNNGG	5 cut(s)	490, 523, 754, 1528, 2770
Bse1I	ACTGG	1 cut(s)	2759
Bse21I	CCTNAGG	1 cut(s)	1314
Bse3DI	GCAATG	2 cut(s)	771, 2184
Bse8I	GATNNNNATC	1 cut(s)	182
BseBI	CCWGG	2 cut(s)	1445, 1889
BseCI	ATCGAT	1 cut(s)	30
BseDI	CCNNGG	4 cut(s)	301, 1887, 2032, 2705
BseGI	GGATG	9 cut(s)	102, 148, 700, 711, 775, 2029, 2194, 2647, 2683
BseJI	GATNNNNATC	1 cut(s)	182
BseLI	CCNNNNNNNGG	5 cut(s)	490, 523, 754, 1528, 2770
BseMI	GCAATG	2 cut(s)	771, 2184
BseMII	CTCAG	9 cut(s)	429, 692, 1210, 1215, 1267, 1305, 1416, 2051, 2069
BseNI	ACTGG	1 cut(s)	2759
BseRI	GAGGAG	4 cut(s)	365, 368, 788, 1415
BsgI	GTGCAG	3 cut(s)	353, 2432, 2739
Bsh1236I	CGCG	1 cut(s)	469
BshFI	GGCC	5 cut(s)	1696, 2091, 2539, 2646, 2704
BshVI	ATCGAT	1 cut(s)	30
BsiHKAI	GWGCWC	2 cut(s)	117, 645
BsiHKCI	CYCGRG	3 cut(s)	73, 116, 2699
BsiSI	CCGG	2 cut(s)	884, 922
BslFI	GGGAC	3 cut(s)	763, 2490, 2747
BslI	CCNNNNNNNGG	5 cut(s)	490, 523, 754, 1528, 2770
BsmAI	GTCTC	3 cut(s)	1086, 1659, 1908
BsmFI	GGGAC	3 cut(s)	763, 2490, 2747
BsmI	GAATGC	1 cut(s)	123
BsnI	GGCC	5 cut(s)	1696, 2091, 2539, 2646, 2704
BsoBI	CYCGRG	3 cut(s)	73, 116, 2699
Bsp1286I	GDGCHC	2 cut(s)	117, 645
Bsp1407I	TGTACA	2 cut(s)	82, 2203
Bsp143I	GATC	8 cut(s)	27, 128, 177, 912, 1039, 1891, 2040, 2587
Bsp1720I	GCTNAGC	1 cut(s)	1866
Bsp19I	CCATGG	1 cut(s)	2032
BspACI	CCGC	2 cut(s)	469, 472
BspANI	GGCC	5 cut(s)	1696, 2091, 2539, 2646, 2704
BspCNI	CTCAG	9 cut(s)	430, 693, 1209, 1214, 1266, 1306, 1417, 2052, 2070
BspDI	ATCGAT	1 cut(s)	30
BspFNI	CGCG	1 cut(s)	469
BspHI	TCATGA	1 cut(s)	1498
BspLI	GGNNCC	1 cut(s)	2562
BspPI	GGATC	2 cut(s)	1899, 2048
BspTI	CTTAAG	1 cut(s)	1819
BsrDI	GCAATG	2 cut(s)	771, 2184
BsrGI	TGTACA	2 cut(s)	82, 2203
BsrI	ACTGG	1 cut(s)	2759
BssECI	CCNNGG	4 cut(s)	301, 1887, 2032, 2705
BssMI	GATC	8 cut(s)	27, 128, 177, 912, 1039, 1891, 2040, 2587
BssNI	GRCGYC	2 cut(s)	1597, 2257
BssT1I	CCWWGG	1 cut(s)	2032
Bst2UI	CCWGG	2 cut(s)	1445, 1889
Bst4CI	ACNGT	6 cut(s)	670, 678, 1462, 1653, 1902, 2208
Bst6I	CTCTTC	1 cut(s)	2520
BstACI	GRCGYC	2 cut(s)	1597, 2257
BstAFI	CTTAAG	1 cut(s)	1819
BstAUI	TGTACA	2 cut(s)	82, 2203
BstBAI	YACGTR	1 cut(s)	1829
BstC8I	GCNNGC	1 cut(s)	2648
BstDSI	CCRYGG	1 cut(s)	2032
BstEII	GGTNACC	1 cut(s)	1110
BstENI	CCTNNNNNAGG	1 cut(s)	1526
BstF5I	GGATG	9 cut(s)	102, 148, 700, 711, 775, 2029, 2194, 2647, 2683
BstFNI	CGCG	1 cut(s)	469
BstHHI	GCGC	2 cut(s)	200, 2177
BstKTI	GATC	8 cut(s)	30, 131, 180, 915, 1042, 1894, 2043, 2590
BstMAI	GTCTC	3 cut(s)	1086, 1659, 1908
BstMBI	GATC	8 cut(s)	27, 128, 177, 912, 1039, 1891, 2040, 2587
BstMWI	GCNNNNNNNGC	5 cut(s)	158, 475, 1936, 2129, 2181
BstNI	CCWGG	2 cut(s)	1445, 1889
BstNSI	RCATGY	4 cut(s)	878, 1558, 2617, 2672
BstPI	GGTNACC	1 cut(s)	1110
BstSCI	CCNGG	3 cut(s)	920, 1443, 1887
BstSFI	CTRYAG	1 cut(s)	867
BstSNI	TACGTA	1 cut(s)	1829
BstUI	CGCG	1 cut(s)	469
BstV2I	GAAGAC	5 cut(s)	299, 389, 1133, 1397, 1510
BstX2I	RGATCY	2 cut(s)	1891, 2587
BstXI	CCANNNNNNTGG	1 cut(s)	2374
BstYI	RGATCY	2 cut(s)	1891, 2587
Bsu15I	ATCGAT	1 cut(s)	30
Bsu36I	CCTNAGG	1 cut(s)	1314
BsuRI	GGCC	5 cut(s)	1696, 2091, 2539, 2646, 2704
BsuTUI	ATCGAT	1 cut(s)	30
BtgI	CCRYGG	1 cut(s)	2032
BtrI	CACGTC	1 cut(s)	2633
BtsCI	GGATG	9 cut(s)	102, 148, 700, 711, 775, 2029, 2194, 2647, 2683
BtsI	GCAGTG	1 cut(s)	2732
BtsIMutI	CAGTG	4 cut(s)	675, 1729, 2486, 2732
Cac8I	GCNNGC	1 cut(s)	2648
CaiI	CAGNNNCTG	1 cut(s)	2446
CciI	TCATGA	1 cut(s)	1498
CfoI	GCGC	2 cut(s)	200, 2177
Cfr13I	GGNCC	3 cut(s)	1695, 2537, 2702
ClaI	ATCGAT	1 cut(s)	30
CseI	GACGC	3 cut(s)	1605, 1772, 2246
Csp6I	GTAC	7 cut(s)	83, 566, 1186, 1346, 1816, 2204, 2209
CviQI	GTAC	7 cut(s)	83, 566, 1186, 1346, 1816, 2204, 2209
DpnI	GATC	8 cut(s)	29, 130, 179, 914, 1041, 1893, 2042, 2589
DpnII	GATC	8 cut(s)	27, 128, 177, 912, 1039, 1891, 2040, 2587
EaeI	YGGCCR	1 cut(s)	2644
Eam1104I	CTCTTC	1 cut(s)	2520
EarI	CTCTTC	1 cut(s)	2520
Ecl136II	GAGCTC	1 cut(s)	115
Eco105I	TACGTA	1 cut(s)	1829
Eco130I	CCWWGG	1 cut(s)	2032
Eco147I	AGGCCT	1 cut(s)	2091
Eco24I	GRGCYC	1 cut(s)	117
Eco53kI	GAGCTC	1 cut(s)	115
Eco57I	CTGAAG	5 cut(s)	1383, 1763, 2468, 2573, 2640
Eco81I	CCTNAGG	1 cut(s)	1314
Eco88I	CYCGRG	3 cut(s)	73, 116, 2699
Eco91I	GGTNACC	1 cut(s)	1110
EcoICRI	GAGCTC	1 cut(s)	115
EcoNI	CCTNNNNNAGG	1 cut(s)	1526
EcoO65I	GGTNACC	1 cut(s)	1110
EcoRII	CCWGG	2 cut(s)	1443, 1887
EcoT14I	CCWWGG	1 cut(s)	2032
EcoT38I	GRGCYC	1 cut(s)	117
ErhI	CCWWGG	1 cut(s)	2032
FalI	AAGNNNNNCTT	2 cut(s)	1506, 1538
FaqI	GGGAC	3 cut(s)	763, 2490, 2747
FauNDI	CATATG	1 cut(s)	2401
FbaI	TGATCA	3 cut(s)	177, 912, 1039
FblI	GTMKAC	1 cut(s)	1574
FokI	GGATG	9 cut(s)	89, 155, 707, 718, 782, 2036, 2201, 2654, 2690
FriOI	GRGCYC	1 cut(s)	117
FspBI	CTAG	8 cut(s)	957, 1133, 1343, 1997, 2165, 2261, 2291, 2300
FspI	TGCGCA	1 cut(s)	2176
GlaI	GCGC	2 cut(s)	199, 2176
GsuI	CTGGAG	2 cut(s)	978, 1047
HaeIII	GGCC	5 cut(s)	1696, 2091, 2539, 2646, 2704
HapII	CCGG	2 cut(s)	884, 922
HgaI	GACGC	3 cut(s)	1605, 1772, 2246
HhaI	GCGC	2 cut(s)	200, 2177
Hin1I	GRCGYC	2 cut(s)	1597, 2257
Hin6I	GCGC	2 cut(s)	198, 2175
HinP1I	GCGC	2 cut(s)	198, 2175
HincII	GTYRAC	2 cut(s)	1149, 2611
HindII	GTYRAC	2 cut(s)	1149, 2611
HindIII	AAGCTT	3 cut(s)	1736, 1937, 2622
HpaII	CCGG	2 cut(s)	884, 922
HphI	GGTGA	6 cut(s)	46, 187, 461, 646, 1852, 2535
Hpy166II	GTNNAC	5 cut(s)	85, 1149, 1465, 1575, 2611
Hpy8I	GTNNAC	5 cut(s)	85, 1149, 1465, 1575, 2611
Hpy99I	CGWCG	2 cut(s)	755, 1599
HpyAV	CCTTC	9 cut(s)	161, 1100, 1358, 1738, 2245, 2363, 2423, 2548, 2550
HpyCH4III	ACNGT	6 cut(s)	670, 678, 1462, 1653, 1902, 2208
HpyCH4IV	ACGT	4 cut(s)	292, 1828, 1960, 2632
HpyF10VI	GCNNNNNNNGC	5 cut(s)	158, 475, 1936, 2129, 2181
HpySE526I	ACGT	4 cut(s)	292, 1828, 1960, 2632
Hsp92I	GRCGYC	2 cut(s)	1597, 2257
HspAI	GCGC	2 cut(s)	198, 2175
Ksp22I	TGATCA	3 cut(s)	177, 912, 1039
Kzo9I	GATC	8 cut(s)	27, 128, 177, 912, 1039, 1891, 2040, 2587
LmnI	GCTCC	2 cut(s)	1771, 2377
MaeI	CTAG	8 cut(s)	957, 1133, 1343, 1997, 2165, 2261, 2291, 2300
MaeII	ACGT	4 cut(s)	292, 1828, 1960, 2632
MalI	GATC	8 cut(s)	29, 130, 179, 914, 1041, 1893, 2042, 2589
MboI	GATC	8 cut(s)	27, 128, 177, 912, 1039, 1891, 2040, 2587
MfeI	CAATTG	1 cut(s)	1122
MflI	RGATCY	2 cut(s)	1891, 2587
MhlI	GDGCHC	2 cut(s)	117, 645
MlsI	TGGCCA	1 cut(s)	2646
MluNI	TGGCCA	1 cut(s)	2646
MlyI	GAGTC	3 cut(s)	785, 1580, 2379
MmeI	TCCRAC	5 cut(s)	1050, 1188, 1610, 2258, 2355
Mox20I	TGGCCA	1 cut(s)	2646
MroXI	GAANNNNTTC	2 cut(s)	493, 2232
MscI	TGGCCA	1 cut(s)	2646
MslI	CAYNNNNRTG	1 cut(s)	2022
Msp20I	TGGCCA	1 cut(s)	2646
MspA1I	CMGCKG	2 cut(s)	2077, 2416
MspCI	CTTAAG	1 cut(s)	1819
MspI	CCGG	2 cut(s)	884, 922
MspR9I	CCNGG	3 cut(s)	922, 1445, 1889
MunI	CAATTG	1 cut(s)	1122
Mva1269I	GAATGC	1 cut(s)	123
MvaI	CCWGG	2 cut(s)	1445, 1889
MvnI	CGCG	1 cut(s)	469
MwoI	GCNNNNNNNGC	5 cut(s)	158, 475, 1936, 2129, 2181
NciI	CCSGG	1 cut(s)	922
NcoI	CCATGG	1 cut(s)	2032
NdeI	CATATG	1 cut(s)	2401
NdeII	GATC	8 cut(s)	27, 128, 177, 912, 1039, 1891, 2040, 2587
NlaIV	GGNNCC	1 cut(s)	2562
NmeAIII	GCCGAG	2 cut(s)	1517, 2730
NmuCI	GTSAC	5 cut(s)	52, 672, 1378, 1550, 2711
NsbI	TGCGCA	1 cut(s)	2176
NspI	RCATGY	4 cut(s)	878, 1558, 2617, 2672
PaeR7I	CTCGAG	2 cut(s)	73, 116
PagI	TCATGA	1 cut(s)	1498
PceI	AGGCCT	1 cut(s)	2091
PciI	ACATGT	1 cut(s)	1554
PctI	GAATGC	1 cut(s)	123
PdmI	GAANNNNTTC	2 cut(s)	493, 2232
PfeI	GAWTC	8 cut(s)	8, 297, 533, 1242, 1538, 2159, 2228, 2571
PflMI	CCANNNNNTGG	1 cut(s)	523
PleI	GAGTC	3 cut(s)	784, 1579, 2379
PpsI	GAGTC	3 cut(s)	784, 1579, 2379
Ppu21I	YACGTR	1 cut(s)	1829
PscI	ACATGT	1 cut(s)	1554
Psp124BI	GAGCTC	1 cut(s)	117
Psp6I	CCWGG	2 cut(s)	1443, 1887
PspEI	GGTNACC	1 cut(s)	1110
PspGI	CCWGG	2 cut(s)	1443, 1887
PspN4I	GGNNCC	1 cut(s)	2562
PspPI	GGNCC	3 cut(s)	1695, 2537, 2702
PsrI	GAACNNNNNNTAC	2 cut(s)	864, 896
PstNI	CAGNNNCTG	1 cut(s)	2446
PsuI	RGATCY	2 cut(s)	1891, 2587
PvuII	CAGCTG	2 cut(s)	2077, 2416
RsaI	GTAC	7 cut(s)	84, 567, 1187, 1347, 1817, 2205, 2210
RsaNI	GTAC	7 cut(s)	83, 566, 1186, 1346, 1816, 2204, 2209
RseI	CAYNNNNRTG	1 cut(s)	2022
SacI	GAGCTC	1 cut(s)	117
Sau3AI	GATC	8 cut(s)	27, 128, 177, 912, 1039, 1891, 2040, 2587
Sau96I	GGNCC	3 cut(s)	1695, 2537, 2702
SchI	GAGTC	3 cut(s)	785, 1580, 2379
ScrFI	CCNGG	3 cut(s)	922, 1445, 1889
SduI	GDGCHC	2 cut(s)	117, 645
SfcI	CTRYAG	1 cut(s)	867
Sfr274I	CTCGAG	2 cut(s)	73, 116
SlaI	CTCGAG	2 cut(s)	73, 116
SmiMI	CAYNNNNRTG	1 cut(s)	2022
SmlI	CTYRAG	9 cut(s)	73, 116, 136, 1228, 1810, 1819, 2101, 2462, 2581
SmoI	CTYRAG	9 cut(s)	73, 116, 136, 1228, 1810, 1819, 2101, 2462, 2581
SnaBI	TACGTA	1 cut(s)	1829
SpeI	ACTAGT	1 cut(s)	1342
SseBI	AGGCCT	1 cut(s)	2091
SsiI	CCGC	2 cut(s)	469, 472
SspI	AATATT	2 cut(s)	260, 803
SspMI	CTAG	8 cut(s)	957, 1133, 1343, 1997, 2165, 2261, 2291, 2300
SstI	GAGCTC	1 cut(s)	117
StuI	AGGCCT	1 cut(s)	2091
StyD4I	CCNGG	3 cut(s)	920, 1443, 1887
StyI	CCWWGG	1 cut(s)	2032
TaaI	ACNGT	6 cut(s)	670, 678, 1462, 1653, 1902, 2208
TaiI	ACGT	4 cut(s)	295, 1831, 1963, 2635
TaqII	GACCGA	1 cut(s)	293
TatI	WGTACW	4 cut(s)	82, 565, 2203, 2208
TauI	GCSGC	1 cut(s)	472
TfiI	GAWTC	8 cut(s)	8, 297, 533, 1242, 1538, 2159, 2228, 2571
TscAI	CASTG	4 cut(s)	675, 1729, 2493, 2739
TseFI	GTSAC	5 cut(s)	52, 672, 1378, 1550, 2711
Tsp45I	GTSAC	5 cut(s)	52, 672, 1378, 1550, 2711
TspGWI	ACGGA	3 cut(s)	1652, 2421, 2690
TspRI	CASTG	4 cut(s)	675, 1729, 2493, 2739
Van91I	CCANNNNNTGG	1 cut(s)	523
Vha464I	CTTAAG	1 cut(s)	1819
XagI	CCTNNNNNAGG	1 cut(s)	1526
XapI	RAATTY	3 cut(s)	93, 1876, 2482
XbaI	TCTAGA	2 cut(s)	2164, 2260
XceI	RCATGY	4 cut(s)	878, 1558, 2617, 2672
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1002
XhoI	CTCGAG	2 cut(s)	73, 116
XmiI	GTMKAC	1 cut(s)	1574
XmnI	GAANNNNTTC	2 cut(s)	493, 2232
XspI	CTAG	8 cut(s)	957, 1133, 1343, 1997, 2165, 2261, 2291, 2300

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.