Rorug01G0389400

Cell cycle regulated microtubule associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0003960
Physical Location & Seq
Reverse (-)
50042021 .. 50047549
5529 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0389400.1

Sequence Viewer

Length: 3174 bp
ATGGAGCTTCATATGCTCAACTTCTGTGCATTTCGGTCTACCTACCTTCATGTCATGATCTCCCTTTTCCTTCTCACCAACCTTTTCCAACCTACTATCTTTGCAAATGCATTGAGCAATGAAACTGATCGATTCGCTTTGCTGAAATTCAAAGAATCCATAGCCACCGATCCAGACGGGCTGTTGAACTCATGGAATGACTCCGTTCACTTCTGCAAATGGCAAGGAATTACTTGTGGCAGACGGCATCAAAGAGTAACAGCCTTGAACCTACCAGACGCTGTTTTGCACGGAACCATATCACCATACATTGGCAACCTCTCCTTTCTCAAGGACTTCAACCTTTACAACAACAGCTTCTCTGGCAAGATTCCACAACAAGTTGAACATTTATTCCGACTACGAGATCTCACTCTCAAATTCAACATGTTGGAGGGGGGAATTCCAGTCAACCTGACCTTCTGTGCGGAACTGAGAATCTTAGATATCGGAGAAAACCGCCTTACCGGCAAAATTCCTTCAGATATCGGGTCATTGAGGAAGCTTTTGTATCTCAATCTAGAGGAAAACAATCTGACGGGACCCATCCCACCTTCCTTGGGGAATCTTTCATCACTCACTGGACTTTACTTGGCAAAGAACAGTTTGGGGGGCACCGTTCCAGAGGTGCTAGGCCGACTGAGAAGCTTATCAGTCTTTGCAATTGGTCCCAATAATCTCTCTGGTTTGATCCCTTCCTCGCTTTTTAACATATCATCTATGAACGTCATCTCACTTACAGAAAATAAGTTTAAGGGCAGTATTCCGCCTGGTATAGGCCTAAACATGCCTAATCTCCAACTATTGTACCTCGGCGGAAATGAATTCTCTGGGAAAATCCCGGCCTCAATTTCCAATGCTTCTAAGCTTCAGAGGCTTGCTTTTGCGGAAAATAATTTTGTTGGGCAAGTTCCCGCAACTTTTGGAAATTTTCCTGATCTTTGGTTTTTCCAGTTAGGCAAAAATAATCTAGGAAGTAATTCATCAAATGATTTGGGATTTATAACTGCCTTGACAAATTGCAGCAATCTGGAAATGGTTGAAATAGGTAATAACAATTTTGGAGGTGTTTTACCAAACTCTGTAGCCAATTTCTCAACCCAACTAACTCAACTCTACCTTGGGGGCAATCAAATAGCGGGAACGATTCCTGAAACATTAGGAAATCTCAACAATTTAATACACTTGAGCCTGGATGGAAACTTGTTCACAGGTATCATTCCAGCTTCTTTTGGGAAGTTACAGAAGCTGCAAAGATTATTTTTAAATTCCAATAGATTATCAGGACGGATCCCATCTTCCATAGGAAACCTCACCCAATTGTCAGTCCTCGTATCATATGATAATGAATTAGAAGGAAGCATTCCTCCAAATATTGGTAACTGCCAAAATATGCAGCAGATGGATATATCAGACAATAAGCTTAGTGGAGATATACCATCACAGGTCATTGGTCTGTCCTCCTTCTCTCTCTTGCTCAACTTATCGCACAACTTGCTAACTGGCAGCCTGCCTGTGGAAGTGGGTAAGCTGAAGAACATCAACAAGCTGGACATCTCTTATAATAATTTGAACGGAGGAATTCCAGAAAGTATTGGAGGCTGTCAGAGCGTTGAAATTCTTTTACTACAAGGGAATCTCTTTCAAGGAATCATACCTTCTTCTTTGGTTTCTTTGAGAGGTCTTCAGTATCTAGATCTTTCACGGAACAACTTGTCAGGACATATTCCAAAAGACCTACAGAGACTTCCGTTCTTGATATATCTAAACCTTTCATCCAATAATCTGGAGGGTGAGGTACCGAAAGAAGGAGTTTTTCGAAACACAAGTGCAATATTATCATTGAATGGAAATACCAAACTTTGTGGCGGGGTTTTGGAATTGCAGCTACCAGCATGCCCCGTCGAAGTCCCAAAGCAGAGAAAGTTGCATGGTTTCAAACTAAAGTTCACATTTTCTTTAGTCGCTGGATGCTGTCTTTTGTTTGCAGTCATCTTTGCAATTTATTGGAGGAGAAAAACTCAAAAGAAGATACCATTATCTACAGTGCCATTTATCAACTTCCTTTCAAAGGTTTCATACCAGACACTTCATCAAGCTACTGGCGGATTCTCTCCGAGCAATCAAATTGGATCAGGCGGTTTTGGCTCTGTATACAAAGGGATTCTTGATCAAGAAGAAAACAGTGTTGTTGCCATAAAGGTCCTCAACCTTCAACAGAAAGGAGCTTCCAAGAGTTTTGTGGCTGAATGCAATGCACTGAGAAATATCCGGCACAAGAATCTTGTGAAGATCTTAACATGTTGCTCCAGCACGGATTACAATGGTAATGACTTCAAAGCTCTAGTTTTTGAGTATATGTCAAATGGAAGTTTAGAGGAGTGGCTGCACAGAGAAAACCAATCAGGGAGTCTGAACCTTCTCCAGAGATTGAATATTGCTTTTGATGTGGCTTCTGCATTGTGTTATCTTCATGACCATTGTGAACCACAAATTATTCACCGTGACATGAAGCCAAGCAACGTTCTTCTTGACGATGACATGGTTGCTCGTGTCGCTGATTTTGGATTAGCAAGACTCATCCCACCGACCACGGACTCCTCTGAAAATCAAAGTAGTACAGTTGGGATAAAGGGAACCATTGGCTATGCTGCTCCAGAGTATGCAATTGGTGTTGAGCCATCAATACAAGGGGATGTATACAGTTACGGGATCCTTGTGTTGCAATTATTCACGGGAAGAAGACCCACTGATGAAATGTTTGTAGACGGTTGCAATATCCATACTTTTGTTAAGACGGCCATACAAGGAAGACTTATGCAAATTGTGGATCCTACTCTTATTGCCACTCTACAAGAGACTGCAACTTCAACAACAAACAATGAAGTGACCAACATCCGTGGTTACAACAATGAAATCGAAGTTGATGAAGGCAACATTGAAAATGAGAATTTAAGCACGATGAACACGTATGTGTGGAAGTGCATACTTCCAACCCTCAAGATTGGACTTGCATGCTCGGAAGAATCACCAAGGAATAGGATGTCTATGGAGGAGGTCCACAGGGAACTACACCATATAAAAAATGCTTACACTGCTGTTGACATCCGTCGAGAGAGGCCAAGAAGAAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPX2_importin

Protein Analysis

1057

Amino Acids

116.23

Weight (kDa)

7.03

Isoelectric Point (pI)

37.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 41 - 79 1.3e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 155 - 260 5.5e-07 Leucine-rich repeat region
LRR_8 PF13855 157 - 216 1.2e-06 Leucine rich repeat
LRR_8 PF13855 381 - 440 1.6e-09 Leucine rich repeat
LRR_14 PF23598 386 - 460 7e-07 Leucine-rich repeat region
LRR_8 PF13855 550 - 609 8e-09 Leucine rich repeat
Pkinase PF00069 720 - 932 5.1e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 721 - 946 1.9e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1043, 1602
Acc65I GGTACC 1 cut(s) 1837
AccB1I GGYRCC 2 cut(s) 653, 1837
AccB7I CCANNNNNTGG 2 cut(s) 311, 1415
AccI GTMKAC 4 cut(s) 38, 2193, 2739, 2805
AclI AACGTT 1 cut(s) 2562
AclWI GGATC 9 cut(s) 164, 724, 1324, 1337, 2179, 2746, 2759, 2864, 2877
AcoI YGGCCR 1 cut(s) 2838
AcuI CTGAAG 4 cut(s) 504, 893, 1592, 1709
AfaI GTAC 3 cut(s) 848, 1839, 2659
AfiI CCNNNNNNNGG 7 cut(s) 311, 599, 815, 1415, 1555, 1847, 2110
AflIII ACRYGT 3 cut(s) 426, 2339, 3006
AjnI CCWGG 2 cut(s) 808, 1230
AleI CACNNNNGTG 1 cut(s) 3011
AloI GAACNNNNNNTCC 2 cut(s) 378, 410
Alw26I GTCTC 2 cut(s) 1777, 2891
AlwI GGATC 9 cut(s) 164, 724, 1324, 1337, 2179, 2746, 2759, 2864, 2877
AlwNI CAGNNNCTG 2 cut(s) 281, 1288
AoxI GGCC 5 cut(s) 673, 817, 882, 2838, 3158
ApeKI GCWGC 7 cut(s) 1062, 1288, 1435, 1545, 1924, 2425, 2690
Asp700I GAANNNNTTC 1 cut(s) 1018
Asp718I GGTACC 1 cut(s) 1837
AspS9I GGNCC 4 cut(s) 581, 707, 2242, 3097
AsuC2I CCSGG 1 cut(s) 881
AsuHPI GGTGA 6 cut(s) 67, 294, 1345, 1844, 2531, 3060
AsuII TTCGAA 1 cut(s) 1858
AvaII GGWCC 4 cut(s) 581, 707, 2242, 3097
BaeGI GKGCMC 1 cut(s) 656
BaeI ACNNNNGTAYC 2 cut(s) 830, 863
BamHI GGATCC 3 cut(s) 1329, 2751, 2869
BanI GGYRCC 2 cut(s) 653, 1837
BauI CACGAG 1 cut(s) 2589
BbsI GAAGAC 3 cut(s) 1715, 2788, 2857
BbvI GCAGC 7 cut(s) 1074, 1275, 1447, 1557, 1936, 2412, 2677
BccI CCATC 6 cut(s) 593, 1229, 1342, 1435, 1486, 2728
BceAI ACGGC 2 cut(s) 260, 2853
BciT130I CCWGG 2 cut(s) 810, 1232
BclI TGATCA 1 cut(s) 2209
BcnI CCSGG 1 cut(s) 881
BcoDI GTCTC 2 cut(s) 1777, 2891
BfaI CTAG 5 cut(s) 560, 671, 1010, 1733, 2384
BfmI CTRYAG 3 cut(s) 1122, 1778, 2082
BglI GCCNNNNNGGC 1 cut(s) 507
BglII AGATCT 3 cut(s) 406, 1735, 2331
BisI GCNGC 7 cut(s) 1063, 1289, 1436, 1546, 1925, 2426, 2691
BlsI GCNGC 7 cut(s) 1064, 1290, 1437, 1547, 1926, 2427, 2692
Bme1390I CCNGG 3 cut(s) 810, 881, 1232
Bme18I GGWCC 4 cut(s) 581, 707, 2242, 3097
BmgT120I GGNCC 4 cut(s) 581, 707, 2242, 3097
BmrFI CCNGG 3 cut(s) 810, 881, 1232
BmsI GCATC 2 cut(s) 256, 2000
BoxI GACNNNNGTC 1 cut(s) 3147
BpiI GAAGAC 3 cut(s) 1715, 2788, 2857
BplI GAGNNNNNCTC 2 cut(s) 2044, 2076
BpmI CTGGAG 4 cut(s) 1847, 2332, 2447, 2679
Bpu14I TTCGAA 1 cut(s) 1858
BpuEI CTTGAG 3 cut(s) 314, 1246, 3023
BpuMI CCSGG 1 cut(s) 881
Bsa29I ATCGAT 1 cut(s) 130
BsaAI YACGTR 1 cut(s) 3009
BsaJI CCNNGG 6 cut(s) 597, 850, 1159, 2631, 2938, 3071
Bsc4I CCNNNNNNNGG 7 cut(s) 311, 599, 815, 1415, 1555, 1847, 2110
Bse118I RCCGGY 1 cut(s) 506
Bse1I ACTGG 5 cut(s) 446, 625, 991, 1546, 2146
Bse3DI GCAATG 2 cut(s) 124, 2299
BseBI CCWGG 2 cut(s) 810, 1232
BseCI ATCGAT 1 cut(s) 130
BseDI CCNNGG 6 cut(s) 597, 850, 1159, 2631, 2938, 3071
BseGI GGATG 9 cut(s) 585, 1240, 1814, 2015, 2619, 2740, 2934, 3087, 3144
BseLI CCNNNNNNNGG 7 cut(s) 311, 599, 815, 1415, 1555, 1847, 2110
BseMI GCAATG 2 cut(s) 124, 2299
BseMII CTCAG 3 cut(s) 464, 671, 2291
BseNI ACTGG 5 cut(s) 446, 625, 991, 1546, 2146
BseRI GAGGAG 4 cut(s) 2065, 2432, 2629, 3107
BseSI GKGCMC 1 cut(s) 656
BseXI GCAGC 7 cut(s) 1074, 1275, 1447, 1557, 1936, 2412, 2677
BsgI GTGCAG 1 cut(s) 2411
BshFI GGCC 5 cut(s) 675, 819, 884, 2840, 3160
BshNI GGYRCC 2 cut(s) 653, 1837
BshVI ATCGAT 1 cut(s) 130
BsiSI CCGG 3 cut(s) 507, 881, 2311
BslFI GGGAC 3 cut(s) 594, 693, 1934
BslI CCNNNNNNNGG 7 cut(s) 311, 599, 815, 1415, 1555, 1847, 2110
BsmAI GTCTC 2 cut(s) 1777, 2891
BsmFI GGGAC 3 cut(s) 594, 693, 1934
BsmI GAATGC 2 cut(s) 1401, 2294
BsnI GGCC 5 cut(s) 675, 819, 884, 2840, 3160
Bsp119I TTCGAA 1 cut(s) 1858
Bsp1286I GDGCHC 1 cut(s) 656
BspANI GGCC 5 cut(s) 675, 819, 884, 2840, 3160
BspCNI CTCAG 3 cut(s) 465, 672, 2292
BspDI ATCGAT 1 cut(s) 130
BspHI TCATGA 2 cut(s) 54, 2512
BspPI GGATC 9 cut(s) 164, 724, 1324, 1337, 2179, 2746, 2759, 2864, 2877
BspT104I TTCGAA 1 cut(s) 1858
BspT107I GGYRCC 2 cut(s) 653, 1837
BsrDI GCAATG 2 cut(s) 124, 2299
BsrFI RCCGGY 1 cut(s) 506
BsrI ACTGG 5 cut(s) 446, 625, 991, 1546, 2146
BssAI RCCGGY 1 cut(s) 506
BssECI CCNNGG 6 cut(s) 597, 850, 1159, 2631, 2938, 3071
BssNAI GTATAC 2 cut(s) 2194, 2740
BssSI CACGAG 1 cut(s) 2589
BssT1I CCWWGG 3 cut(s) 597, 1159, 3071
Bst1107I GTATAC 2 cut(s) 2194, 2740
Bst2BI CACGAG 1 cut(s) 2589
Bst2UI CCWGG 2 cut(s) 810, 1232
Bst4CI ACNGT 8 cut(s) 644, 658, 2086, 2225, 2543, 2662, 2744, 2810
BstAPI GCANNNNNTGC 1 cut(s) 1534
BstBAI YACGTR 1 cut(s) 3009
BstBI TTCGAA 1 cut(s) 1858
BstC8I GCNNGC 4 cut(s) 918, 1550, 1936, 3055
BstDEI CTNAG 6 cut(s) 473, 481, 680, 903, 1463, 2300
BstDSI CCRYGG 2 cut(s) 2631, 2938
BstENI CCTNNNNNAGG 2 cut(s) 813, 2108
BstF5I GGATG 9 cut(s) 585, 1240, 1814, 2015, 2619, 2740, 2934, 3087, 3144
BstMAI GTCTC 2 cut(s) 1777, 2891
BstMWI GCNNNNNNNGC 9 cut(s) 13, 363, 507, 913, 1534, 1647, 2184, 2594, 3134
BstNI CCWGG 2 cut(s) 810, 1232
BstNSI RCATGY 5 cut(s) 430, 829, 1938, 2343, 3057
BstPAI GACNNNNGTC 1 cut(s) 3147
BstSCI CCNGG 3 cut(s) 808, 879, 1230
BstSFI CTRYAG 3 cut(s) 1122, 1778, 2082
BstSLI GKGCMC 1 cut(s) 656
BstV1I GCAGC 7 cut(s) 1074, 1275, 1447, 1557, 1936, 2412, 2677
BstV2I GAAGAC 3 cut(s) 1715, 2788, 2857
BstX2I RGATCY 6 cut(s) 406, 1329, 1735, 2331, 2751, 2869
BstXI CCANNNNNNTGG 1 cut(s) 1825
BstYI RGATCY 6 cut(s) 406, 1329, 1735, 2331, 2751, 2869
BstZ17I GTATAC 2 cut(s) 2194, 2740
Bsu15I ATCGAT 1 cut(s) 130
BsuRI GGCC 5 cut(s) 675, 819, 884, 2840, 3160
BsuTUI ATCGAT 1 cut(s) 130
BtgI CCRYGG 2 cut(s) 2631, 2938
BtsCI GGATG 9 cut(s) 585, 1240, 1814, 2015, 2619, 2740, 2934, 3087, 3144
BtsI GCAGTG 1 cut(s) 3132
BtsIMutI CAGTG 6 cut(s) 618, 2091, 2230, 2297, 2787, 3132
Cac8I GCNNGC 4 cut(s) 918, 1550, 1936, 3055
CaiI CAGNNNCTG 2 cut(s) 281, 1288
CciI TCATGA 2 cut(s) 54, 2512
Cfr10I RCCGGY 1 cut(s) 506
Cfr13I GGNCC 4 cut(s) 581, 707, 2242, 3097
ClaI ATCGAT 1 cut(s) 130
CseI GACGC 1 cut(s) 287
Csp6I GTAC 3 cut(s) 847, 1838, 2658
CspCI CAANNNNNGTGG 6 cut(s) 579, 614, 1885, 1920, 2920, 2955
CviQI GTAC 3 cut(s) 847, 1838, 2658
DdeI CTNAG 6 cut(s) 473, 481, 680, 903, 1463, 2300
DraI TTTAAA 1 cut(s) 1305
EaeI YGGCCR 1 cut(s) 2838
EciI GGCGGA 3 cut(s) 795, 870, 2160
Eco130I CCWWGG 3 cut(s) 597, 1159, 3071
Eco147I AGGCCT 1 cut(s) 819
Eco32I GATATC 2 cut(s) 487, 526
Eco47I GGWCC 4 cut(s) 581, 707, 2242, 3097
Eco57I CTGAAG 4 cut(s) 504, 893, 1592, 1709
EcoNI CCTNNNNNAGG 2 cut(s) 813, 2108
EcoO109I RGGNCCY 2 cut(s) 581, 2242
EcoRI GAATTC 3 cut(s) 441, 863, 1620
EcoRII CCWGG 2 cut(s) 808, 1230
EcoRV GATATC 2 cut(s) 487, 526
EcoT14I CCWWGG 3 cut(s) 597, 1159, 3071
EcoT22I ATGCAT 1 cut(s) 112
ErhI CCWWGG 3 cut(s) 597, 1159, 3071
FalI AAGNNNNNCTT 4 cut(s) 2190, 2222, 2838, 2870
FaqI GGGAC 3 cut(s) 594, 693, 1934
FauI CCCGC 3 cut(s) 961, 1171, 1901
FauNDI CATATG 2 cut(s) 12, 1378
FbaI TGATCA 1 cut(s) 2209
FblI GTMKAC 4 cut(s) 38, 2193, 2739, 2805
Fnu4HI GCNGC 7 cut(s) 1063, 1289, 1436, 1546, 1925, 2426, 2691
FokI GGATG 9 cut(s) 572, 1247, 1801, 2022, 2606, 2747, 2921, 3094, 3131
Fsp4HI GCNGC 7 cut(s) 1063, 1289, 1436, 1546, 1925, 2426, 2691
FspBI CTAG 5 cut(s) 560, 671, 1010, 1733, 2384
GluI GCNGC 7 cut(s) 1063, 1289, 1436, 1546, 1925, 2426, 2691
GsuI CTGGAG 4 cut(s) 1847, 2332, 2447, 2679
HaeIII GGCC 5 cut(s) 675, 819, 884, 2840, 3160
HapII CCGG 3 cut(s) 507, 881, 2311
HgaI GACGC 1 cut(s) 287
HincII GTYRAC 2 cut(s) 451, 3142
HindII GTYRAC 2 cut(s) 451, 3142
HindIII AAGCTT 4 cut(s) 542, 685, 905, 1460
HpaII CCGG 3 cut(s) 507, 881, 2311
HphI GGTGA 6 cut(s) 67, 294, 1345, 1844, 2531, 3060
Hpy99I CGWCG 2 cut(s) 1946, 3153
HpyCH4III ACNGT 8 cut(s) 644, 658, 2086, 2225, 2543, 2662, 2744, 2810
HpyCH4IV ACGT 3 cut(s) 765, 2562, 3008
HpyF10VI GCNNNNNNNGC 9 cut(s) 13, 363, 507, 913, 1534, 1647, 2184, 2594, 3134
HpyF3I CTNAG 6 cut(s) 473, 481, 680, 903, 1463, 2300
HpySE526I ACGT 3 cut(s) 765, 2562, 3008
KflI GGGWCCC 1 cut(s) 581
KpnI GGTACC 1 cut(s) 1841
Ksp22I TGATCA 1 cut(s) 2209
LmnI GCTCC 4 cut(s) 4, 2264, 2351, 2698
Lsp1109I GCAGC 7 cut(s) 1074, 1275, 1447, 1557, 1936, 2412, 2677
LweI GCATC 2 cut(s) 256, 2000
MaeI CTAG 5 cut(s) 560, 671, 1010, 1733, 2384
MaeII ACGT 3 cut(s) 765, 2562, 3008
MaeIII GTNAC 7 cut(s) 256, 1278, 1418, 2543, 2744, 2926, 2942
MfeI CAATTG 3 cut(s) 702, 1358, 2706
MflI RGATCY 6 cut(s) 406, 1329, 1735, 2331, 2751, 2869
MhlI GDGCHC 1 cut(s) 656
MlyI GAGTC 4 cut(s) 194, 2458, 2610, 2630
MmeI TCCRAC 5 cut(s) 112, 411, 421, 862, 3056
Mph1103I ATGCAT 1 cut(s) 112
MroXI GAANNNNTTC 1 cut(s) 1018
MseI TTAA 7 cut(s) 747, 792, 1217, 1304, 2336, 2832, 2993
MslI CAYNNNNRTG 1 cut(s) 3011
MspI CCGG 3 cut(s) 507, 881, 2311
MspR9I CCNGG 3 cut(s) 810, 881, 1232
MunI CAATTG 3 cut(s) 702, 1358, 2706
Mva1269I GAATGC 2 cut(s) 1401, 2294
MvaI CCWGG 2 cut(s) 810, 1232
MwoI GCNNNNNNNGC 9 cut(s) 13, 363, 507, 913, 1534, 1647, 2184, 2594, 3134
NciI CCSGG 1 cut(s) 881
NdeI CATATG 2 cut(s) 12, 1378
NmeAIII GCCGAG 1 cut(s) 831
NmuCI GTSAC 2 cut(s) 2543, 2926
NsiI ATGCAT 1 cut(s) 112
NspI RCATGY 5 cut(s) 430, 829, 1938, 2343, 3057
NspV TTCGAA 1 cut(s) 1858
OliI CACNNNNGTG 1 cut(s) 3011
PaeI GCATGC 2 cut(s) 1938, 3057
PagI TCATGA 2 cut(s) 54, 2512
PceI AGGCCT 1 cut(s) 819
PciI ACATGT 2 cut(s) 426, 2339
PcsI WCGNNNNNNNCGW 1 cut(s) 3005
PctI GAATGC 2 cut(s) 1401, 2294
PdmI GAANNNNTTC 1 cut(s) 1018
PflMI CCANNNNNTGG 2 cut(s) 311, 1415
PkrI GCNGC 7 cut(s) 1064, 1290, 1437, 1547, 1926, 2427, 2692
PleI GAGTC 4 cut(s) 194, 2457, 2610, 2630
PpsI GAGTC 4 cut(s) 194, 2457, 2610, 2630
Ppu21I YACGTR 1 cut(s) 3009
PpuMI RGGWCCY 2 cut(s) 581, 2242
PscI ACATGT 2 cut(s) 426, 2339
PshAI GACNNNNGTC 1 cut(s) 3147
PsiI TTATAA 2 cut(s) 1043, 1602
Psp1406I AACGTT 1 cut(s) 2562
Psp5II RGGWCCY 2 cut(s) 581, 2242
Psp6I CCWGG 2 cut(s) 808, 1230
PspGI CCWGG 2 cut(s) 808, 1230
PspPI GGNCC 4 cut(s) 581, 707, 2242, 3097
PspPPI RGGWCCY 2 cut(s) 581, 2242
PstNI CAGNNNCTG 2 cut(s) 281, 1288
PsuI RGATCY 6 cut(s) 406, 1329, 1735, 2331, 2751, 2869
RsaI GTAC 3 cut(s) 848, 1839, 2659
RsaNI GTAC 3 cut(s) 847, 1838, 2658
RseI CAYNNNNRTG 1 cut(s) 3011
SaqAI TTAA 7 cut(s) 747, 792, 1217, 1304, 2336, 2832, 2993
SatI GCNGC 7 cut(s) 1063, 1289, 1436, 1546, 1925, 2426, 2691
Sau96I GGNCC 4 cut(s) 581, 707, 2242, 3097
SchI GAGTC 4 cut(s) 194, 2458, 2610, 2630
ScrFI CCNGG 3 cut(s) 810, 881, 1232
SduI GDGCHC 1 cut(s) 656
SfaNI GCATC 2 cut(s) 256, 2000
SfcI CTRYAG 3 cut(s) 1122, 1778, 2082
SfuI TTCGAA 1 cut(s) 1858
SinI GGWCC 4 cut(s) 581, 707, 2242, 3097
SmiMI CAYNNNNRTG 1 cut(s) 3011
SmlI CTYRAG 3 cut(s) 329, 1225, 3038
SmoI CTYRAG 3 cut(s) 329, 1225, 3038
SphI GCATGC 2 cut(s) 1938, 3057
SseBI AGGCCT 1 cut(s) 819
SspI AATATT 3 cut(s) 1414, 1875, 2476
SspMI CTAG 5 cut(s) 560, 671, 1010, 1733, 2384
StuI AGGCCT 1 cut(s) 819
StyD4I CCNGG 3 cut(s) 808, 879, 1230
StyI CCWWGG 3 cut(s) 597, 1159, 3071
TaaI ACNGT 8 cut(s) 644, 658, 2086, 2225, 2543, 2662, 2744, 2810
TaiI ACGT 3 cut(s) 768, 2565, 3011
TaqI TCGA 5 cut(s) 130, 1858, 1944, 2958, 3151
TaqII GACCGA 1 cut(s) 24
TatI WGTACW 1 cut(s) 2657
Tru1I TTAA 7 cut(s) 747, 792, 1217, 1304, 2336, 2832, 2993
Tru9I TTAA 7 cut(s) 747, 792, 1217, 1304, 2336, 2832, 2993
TscAI CASTG 6 cut(s) 625, 2091, 2230, 2304, 2794, 3139
TseFI GTSAC 2 cut(s) 2543, 2926
TseI GCWGC 7 cut(s) 1062, 1288, 1435, 1545, 1924, 2425, 2690
Tsp45I GTSAC 2 cut(s) 2543, 2926
TspRI CASTG 6 cut(s) 625, 2091, 2230, 2304, 2794, 3139
Van91I CCANNNNNTGG 2 cut(s) 311, 1415
VpaK11BI GGWCC 4 cut(s) 581, 707, 2242, 3097
XagI CCTNNNNNAGG 2 cut(s) 813, 2108
XbaI TCTAGA 2 cut(s) 559, 1732
XceI RCATGY 5 cut(s) 430, 829, 1938, 2343, 3057
XcmI CCANNNNNNNNNTGG 1 cut(s) 2278
XmiI GTMKAC 4 cut(s) 38, 2193, 2739, 2805
XmnI GAANNNNTTC 1 cut(s) 1018
XspI CTAG 5 cut(s) 560, 671, 1010, 1733, 2384
Zsp2I ATGCAT 1 cut(s) 112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.