Prupe.2G283200_v2.0.a1

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
28108577 .. 28110965
2389 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G283200.1

Sequence Viewer

Length: 2124 bp
ATGGCAGAGTCAGTTCTATGCTTTGTGATCGAGAAACTAGTTTCACTACTCATCATCAGCACAGAAGCAAAACTTTCTAGAGACGTACGCAAAGAAGTTGGTTGCATAAGAGACGAGCTCGAGAGCATCCAGTCATTCCTCAAGGATGCAGATGCTAAGATCGCAGTAGAAGGAGAGATGGATGACAGTATCAAAACTTGGTTTAGACAAATAAGGGAGGCAGCTTATTACATAGAAGATGCCATTGATGAATATTTGCTTTGCATCACACAGCACCATCAAGATCGTGGTTTTCTACATAAAATTACTTGGTTGGTGAAGAAAATGAAACCACAGGATGAGATGGCCTCCAAAATTGAAGCTATGAAAACATTAGTTAGTGAAATCAAGGCTAGACATGAAGGATATGGTTTCAATTCCAGTGAACAAGGACAAAGCAGTGGAGAAATGACTGTTCCATGGCATGACCCTAGAGTGGCTTCCCTTTTCATTGAGGAAGCACAAGTTGTGGGTGTTGAATCTGCCAGAGATGAGCTGATCAATTGGTTGGTAGAAGGAGCATCAAAACATGAACTCCGTGAAGTGATTATGGTGCTTGGTATGGGAGGACTTGGCATGACCACTCTTGCCAAGGAAGTCTATGACAGCCAGATTGTGATGGCACATTTGATTGCGATGCTTGGAATACAGTTTCTCAGTTGTCTCTTAACATTGTTAAAAATTTGTATAAGATTAATTCGGTTGTGGATGGCTGAAGGATTAGTAAAATCGAAGAAGGGAAAAACATCAGAAGAGGTTGAAGAGGAATACCTGACTGAGCTAATCCACAGAAGCTTGGTTCAAGTGTCAAGAGTTTACATTGATGGGAAAGCTAGAAGTTGTCGAGTTCATGATCTGTTGTGTGAAGTCCTCCTTAGAAGGGGCATGGAGTCGAGTTTCTGTCACATGTTATCGGAACATGAGTCAAATTTCACACCAGTAACTCGACGTTTCTCCATAGACAGCAGTTCCTCTGATGCCTTGAGAAGCATTGAACAATCACATATTCGTTCGGTACTTACTTTCAACCAAGAAGAATGGCCCAAGTCTTTTCTCAATACATTGAGTGGAAACTTTAAACTTCTGAAAGTATTGGATTTTGCAGATGCTCCAAAATATCAACTTCCGAAATACATGGGAGATTTGTATCTTTTGAAGTACTTAAGCCTGAGGAATACAAAGGTGAAGTTGCTCCCGGATTCCATAGGAAATTTGCAAAACTTAGAGACCCCGGATCTAAAACAGTGTCTAGTGTATGAAATACCTGCCAAGATAATAAGCTTCTTAAGAGTGAAGATACATGACGGTATTGGATGCTTACAAGCTTTGCAAAAGCTATACCATGTGGAGGCAAATCATGGAGGGATCAACCTAATCAAAGCATTGGGAAAGCTAAGGCAGCTGCGAAGGTTGGGCCTCAAAAACCTGAAAAGTGAAGATGGAGGGGCTCTATGTGCTTCTATTGAAAAGATGAACCACCTAGAATCTCTAGAAGTAAGCACATTAAGCGAAGATGAAGTCCTTGATCTACAATCCCTTTCAACTCCACCAAAATTTATTCGGTTTCTGTACTTGAAGGGGCCTCTAGAGCAGTTGCCTAGTTGGATCCCACAGCTTCAACAACTCGTCAAGCTACGGATTTTTTGGTCAAGGTTGAGAGATTCCCCATTGAAAGCCCTTCAAAACCTTCCTCATTTGTTGGAGCTTGGGTTCTCATACAAGGCATATGATGGTGTGCAGCTGCATTTTGAGGGAGGCTTTGAGAAACTCAGGGTGTTAAAACTCAAGGACTTGAAGGGTTTAAGTTCATTGATTATAGACAATGGGGTTATGCCTGATCTCCAAGAGCTACAAATAGGGCCTTCCCCACAACTGAAGGAGGTGCCCTCTGGCATCCATCATCTGAGAAATCTAACAACTCTTAGATTTGTTGACATGCCAAAAGAATTCCCAAGAAATATGGATCCAAATGATGGCCAACATTATTGGGTTGTTGAGCATATAAAATATGTTCTTTTTAGTTACAAGTTTGGACCAAGATGTGGCGTATTTGAAACTCACACCCTGCGTGATTCCAGCTTGTGA

Protein Analysis

708

Amino Acids

80.67

Weight (kDa)

6.66

Isoelectric Point (pI)

49.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1312
AccB1I GGYRCC 1 cut(s) 1921
AccB7I CCANNNNNTGG 2 cut(s) 2012, 2081
AclWI GGATC 6 cut(s) 1281, 1412, 1639, 1652, 1997, 2010
AcoI YGGCCR 1 cut(s) 2014
AcsI RAATTY 5 cut(s) 720, 967, 1249, 1592, 1985
AcuI CTGAAG 2 cut(s) 774, 1934
AfaI GTAC 4 cut(s) 87, 1056, 1199, 1610
AfiI CCNNNNNNNGG 5 cut(s) 475, 919, 1387, 2012, 2081
AflII CTTAAG 2 cut(s) 1201, 1324
AflIII ACRYGT 1 cut(s) 945
AhlI ACTAGT 1 cut(s) 37
AloI GAACNNNNNNTCC 2 cut(s) 1733, 1765
Alw21I GWGCWC 1 cut(s) 120
Alw26I GTCTC 4 cut(s) 75, 105, 707, 1259
AlwI GGATC 6 cut(s) 1281, 1412, 1639, 1652, 1997, 2010
Ama87I CYCGRG 1 cut(s) 119
AoxI GGCC 6 cut(s) 345, 1079, 1453, 1619, 1898, 2014
ApeKI GCWGC 5 cut(s) 221, 1438, 1441, 1777, 1780
ApoI RAATTY 5 cut(s) 720, 967, 1249, 1592, 1985
ArsI GACNNNNNNTTYG 2 cut(s) 1542, 1574
AseI ATTAAT 1 cut(s) 734
AspS9I GGNCC 5 cut(s) 1080, 1453, 1619, 1898, 2072
AsuC2I CCSGG 2 cut(s) 1235, 1271
AsuHPI GGTGA 2 cut(s) 328, 1234
AvaI CYCGRG 1 cut(s) 119
AvaII GGWCC 1 cut(s) 2072
AxyI CCTNAGG 1 cut(s) 1208
BaeGI GKGCMC 1 cut(s) 1926
BalI TGGCCA 1 cut(s) 2016
BamHI GGATCC 2 cut(s) 1644, 2002
BanI GGYRCC 1 cut(s) 1921
BanII GRGCYC 2 cut(s) 120, 1489
Bbv12I GWGCWC 1 cut(s) 120
BbvI GCAGC 5 cut(s) 233, 1428, 1450, 1767, 1789
BclI TGATCA 1 cut(s) 537
BcnI CCSGG 2 cut(s) 1235, 1271
BcoDI GTCTC 4 cut(s) 75, 105, 707, 1259
BcuI ACTAGT 1 cut(s) 37
BfrI CTTAAG 2 cut(s) 1201, 1324
BfuAI ACCTGC 1 cut(s) 1312
BisI GCNGC 5 cut(s) 222, 1439, 1442, 1778, 1781
BlsI GCNGC 5 cut(s) 223, 1440, 1443, 1779, 1782
BmcAI AGTACT 1 cut(s) 1199
Bme1390I CCNGG 2 cut(s) 1235, 1271
Bme18I GGWCC 1 cut(s) 2072
BmeT110I CYCGRG 1 cut(s) 119
BmgT120I GGNCC 5 cut(s) 1080, 1453, 1619, 1898, 2072
BmiI GGNNCC 4 cut(s) 1620, 1646, 1923, 2004
BmrFI CCNGG 2 cut(s) 1235, 1271
BplI GAGNNNNNCTC 6 cut(s) 102, 134, 332, 364, 1910, 1942
Bpu10I CCTNAGC 1 cut(s) 1433
BpuEI CTTGAG 3 cut(s) 125, 1042, 1808
BpuMI CCSGG 2 cut(s) 1235, 1271
BsaBI GATNNNNATC 1 cut(s) 1185
BsaI GGTCTC 1 cut(s) 1259
BsaJI CCNNGG 3 cut(s) 458, 630, 1269
BsaXI ACNNNNNCTCC 4 cut(s) 558, 588, 1733, 1763
Bsc4I CCNNNNNNNGG 5 cut(s) 475, 919, 1387, 2012, 2081
Bse1I ACTGG 3 cut(s) 130, 420, 977
Bse21I CCTNAGG 1 cut(s) 1208
Bse8I GATNNNNATC 1 cut(s) 1185
BseDI CCNNGG 3 cut(s) 458, 630, 1269
BseGI GGATG 7 cut(s) 126, 151, 187, 343, 753, 1358, 1932
BseJI GATNNNNATC 1 cut(s) 1185
BseLI CCNNNNNNNGG 5 cut(s) 475, 919, 1387, 2012, 2081
BseMII CTCAG 5 cut(s) 709, 807, 1199, 1822, 1934
BseNI ACTGG 3 cut(s) 130, 420, 977
BseSI GKGCMC 1 cut(s) 1926
BseXI GCAGC 5 cut(s) 233, 1428, 1450, 1767, 1789
BsgI GTGCAG 1 cut(s) 1796
BshFI GGCC 6 cut(s) 347, 1081, 1455, 1621, 1900, 2016
BshNI GGYRCC 1 cut(s) 1921
BsiHKAI GWGCWC 1 cut(s) 120
BsiHKCI CYCGRG 1 cut(s) 119
BsiSI CCGG 2 cut(s) 1235, 1271
BsiWI CGTACG 1 cut(s) 85
BslI CCNNNNNNNGG 5 cut(s) 475, 919, 1387, 2012, 2081
BsmAI GTCTC 4 cut(s) 75, 105, 707, 1259
BsmBI CGTCTC 2 cut(s) 75, 105
BsnI GGCC 6 cut(s) 347, 1081, 1455, 1621, 1900, 2016
Bso31I GGTCTC 1 cut(s) 1259
BsoBI CYCGRG 1 cut(s) 119
Bsp1286I GDGCHC 3 cut(s) 120, 1489, 1926
Bsp19I CCATGG 1 cut(s) 458
BspANI GGCC 6 cut(s) 347, 1081, 1455, 1621, 1900, 2016
BspCNI CTCAG 5 cut(s) 708, 808, 1200, 1821, 1935
BspHI TCATGA 1 cut(s) 889
BspLI GGNNCC 4 cut(s) 1620, 1646, 1923, 2004
BspMI ACCTGC 1 cut(s) 1312
BspPI GGATC 6 cut(s) 1281, 1412, 1639, 1652, 1997, 2010
BspT107I GGYRCC 1 cut(s) 1921
BspTI CTTAAG 2 cut(s) 1201, 1324
BspTNI GGTCTC 1 cut(s) 1259
BsrI ACTGG 3 cut(s) 130, 420, 977
BssECI CCNNGG 3 cut(s) 458, 630, 1269
BssT1I CCWWGG 2 cut(s) 458, 630
Bst4CI ACNGT 5 cut(s) 188, 454, 690, 1284, 1346
Bst6I CTCTTC 2 cut(s) 786, 795
BstAFI CTTAAG 2 cut(s) 1201, 1324
BstDSI CCRYGG 1 cut(s) 458
BstF5I GGATG 7 cut(s) 126, 151, 187, 343, 753, 1358, 1932
BstMAI GTCTC 4 cut(s) 75, 105, 707, 1259
BstMWI GCNNNNNNNGC 5 cut(s) 161, 1438, 1493, 1545, 1627
BstNSI RCATGY 2 cut(s) 949, 1978
BstSCI CCNGG 2 cut(s) 1233, 1269
BstSLI GKGCMC 1 cut(s) 1926
BstV1I GCAGC 5 cut(s) 233, 1428, 1450, 1767, 1789
BstX2I RGATCY 3 cut(s) 1273, 1644, 2002
BstYI RGATCY 3 cut(s) 1273, 1644, 2002
Bsu36I CCTNAGG 1 cut(s) 1208
BsuRI GGCC 6 cut(s) 347, 1081, 1455, 1621, 1900, 2016
BtgI CCRYGG 1 cut(s) 458
BtgZI GCGATG 1 cut(s) 689
BtsCI GGATG 7 cut(s) 126, 151, 187, 343, 753, 1358, 1932
BtsI GCAGTG 1 cut(s) 445
BtsIMutI CAGTG 3 cut(s) 427, 445, 1289
BveI ACCTGC 1 cut(s) 1312
CciI TCATGA 1 cut(s) 889
Cfr13I GGNCC 5 cut(s) 1080, 1453, 1619, 1898, 2072
Csp6I GTAC 4 cut(s) 86, 1055, 1198, 1609
CviQI GTAC 4 cut(s) 86, 1055, 1198, 1609
DraI TTTAAA 1 cut(s) 1117
EaeI YGGCCR 1 cut(s) 2014
Eam1104I CTCTTC 2 cut(s) 786, 795
EarI CTCTTC 2 cut(s) 786, 795
Ecl136II GAGCTC 1 cut(s) 118
Eco130I CCWWGG 2 cut(s) 458, 630
Eco24I GRGCYC 2 cut(s) 120, 1489
Eco31I GGTCTC 1 cut(s) 1259
Eco47I GGWCC 1 cut(s) 2072
Eco53kI GAGCTC 1 cut(s) 118
Eco57I CTGAAG 2 cut(s) 774, 1934
Eco81I CCTNAGG 1 cut(s) 1208
Eco88I CYCGRG 1 cut(s) 119
EcoICRI GAGCTC 1 cut(s) 118
EcoO109I RGGNCCY 2 cut(s) 1619, 1898
EcoRI GAATTC 1 cut(s) 1985
EcoT14I CCWWGG 2 cut(s) 458, 630
EcoT38I GRGCYC 2 cut(s) 120, 1489
ErhI CCWWGG 2 cut(s) 458, 630
Esp3I CGTCTC 2 cut(s) 75, 105
FalI AAGNNNNNCTT 4 cut(s) 57, 89, 897, 929
FauNDI CATATG 1 cut(s) 1765
FbaI TGATCA 1 cut(s) 537
Fnu4HI GCNGC 5 cut(s) 222, 1439, 1442, 1778, 1781
FokI GGATG 7 cut(s) 113, 158, 194, 350, 760, 1365, 1919
FriOI GRGCYC 2 cut(s) 120, 1489
Fsp4HI GCNGC 5 cut(s) 222, 1439, 1442, 1778, 1781
GluI GCNGC 5 cut(s) 222, 1439, 1442, 1778, 1781
HaeIII GGCC 6 cut(s) 347, 1081, 1455, 1621, 1900, 2016
HapII CCGG 2 cut(s) 1235, 1271
HincII GTYRAC 1 cut(s) 1972
HindII GTYRAC 1 cut(s) 1972
HindIII AAGCTT 3 cut(s) 832, 1318, 1362
HinfI GANTC 8 cut(s) 8, 518, 929, 962, 1238, 1523, 1700, 2111
HpaII CCGG 2 cut(s) 1235, 1271
HphI GGTGA 2 cut(s) 328, 1234
Hpy166II GTNNAC 3 cut(s) 425, 856, 1972
Hpy188I TCNGA 6 cut(s) 790, 955, 1015, 1125, 1167, 1944
Hpy188III TCNNGA 8 cut(s) 31, 78, 121, 281, 849, 890, 1529, 1625
Hpy8I GTNNAC 3 cut(s) 425, 856, 1972
Hpy99I CGWCG 1 cut(s) 990
HpyCH4III ACNGT 5 cut(s) 188, 454, 690, 1284, 1346
HpyCH4IV ACGT 2 cut(s) 84, 988
HpyCH4V TGCA 8 cut(s) 105, 149, 264, 1142, 1255, 1369, 1777, 1783
HpyF10VI GCNNNNNNNGC 5 cut(s) 161, 1438, 1493, 1545, 1627
HpySE526I ACGT 2 cut(s) 84, 988
Ksp22I TGATCA 1 cut(s) 537
LmnI GCTCC 4 cut(s) 557, 1153, 1236, 1741
Lsp1109I GCAGC 5 cut(s) 233, 1428, 1450, 1767, 1789
MaeII ACGT 2 cut(s) 84, 988
MaeIII GTNAC 3 cut(s) 941, 979, 2060
MboII GAAGA 9 cut(s) 248, 331, 784, 803, 812, 1085, 1345, 1487, 1562
MfeI CAATTG 1 cut(s) 541
MflI RGATCY 3 cut(s) 1273, 1644, 2002
MhlI GDGCHC 3 cut(s) 120, 1489, 1926
MlsI TGGCCA 1 cut(s) 2016
MluNI TGGCCA 1 cut(s) 2016
MlyI GAGTC 3 cut(s) 17, 938, 971
MmeI TCCRAC 2 cut(s) 1622, 1719
Mox20I TGGCCA 1 cut(s) 2016
MscI TGGCCA 1 cut(s) 2016
MseI TTAA 9 cut(s) 707, 716, 734, 1116, 1202, 1325, 1544, 1817, 1841
Msp20I TGGCCA 1 cut(s) 2016
MspA1I CMGCKG 2 cut(s) 1441, 1780
MspCI CTTAAG 2 cut(s) 1201, 1324
MspI CCGG 2 cut(s) 1235, 1271
MspR9I CCNGG 2 cut(s) 1235, 1271
MunI CAATTG 1 cut(s) 541
MwoI GCNNNNNNNGC 5 cut(s) 161, 1438, 1493, 1545, 1627
NciI CCSGG 2 cut(s) 1235, 1271
NcoI CCATGG 1 cut(s) 458
NdeI CATATG 1 cut(s) 1765
NlaIV GGNNCC 4 cut(s) 1620, 1646, 1923, 2004
NmuCI GTSAC 1 cut(s) 941
NspI RCATGY 2 cut(s) 949, 1978
PaeR7I CTCGAG 1 cut(s) 119
PagI TCATGA 1 cut(s) 889
PciI ACATGT 1 cut(s) 945
PfeI GAWTC 5 cut(s) 518, 1238, 1523, 1700, 2111
Pfl23II CGTACG 1 cut(s) 85
PflMI CCANNNNNTGG 2 cut(s) 2012, 2081
PfoI TCCNGGA 1 cut(s) 1233
PkrI GCNGC 5 cut(s) 223, 1440, 1443, 1779, 1782
PleI GAGTC 3 cut(s) 16, 937, 970
PpsI GAGTC 3 cut(s) 16, 937, 970
PscI ACATGT 1 cut(s) 945
PshBI ATTAAT 1 cut(s) 734
Psp124BI GAGCTC 1 cut(s) 120
PspLI CGTACG 1 cut(s) 85
PspN4I GGNNCC 4 cut(s) 1620, 1646, 1923, 2004
PspPI GGNCC 5 cut(s) 1080, 1453, 1619, 1898, 2072
PsuI RGATCY 3 cut(s) 1273, 1644, 2002
PvuII CAGCTG 2 cut(s) 1441, 1780
RsaI GTAC 4 cut(s) 87, 1056, 1199, 1610
RsaNI GTAC 4 cut(s) 86, 1055, 1198, 1609
SacI GAGCTC 1 cut(s) 120
SaqAI TTAA 9 cut(s) 707, 716, 734, 1116, 1202, 1325, 1544, 1817, 1841
SatI GCNGC 5 cut(s) 222, 1439, 1442, 1778, 1781
Sau96I GGNCC 5 cut(s) 1080, 1453, 1619, 1898, 2072
ScaI AGTACT 1 cut(s) 1199
SchI GAGTC 3 cut(s) 17, 938, 971
ScrFI CCNGG 2 cut(s) 1235, 1271
SduI GDGCHC 3 cut(s) 120, 1489, 1926
Sfr274I CTCGAG 1 cut(s) 119
SinI GGWCC 1 cut(s) 2072
SlaI CTCGAG 1 cut(s) 119
SmlI CTYRAG 6 cut(s) 119, 140, 1021, 1201, 1324, 1823
SmoI CTYRAG 6 cut(s) 119, 140, 1021, 1201, 1324, 1823
SpeI ACTAGT 1 cut(s) 37
SspI AATATT 1 cut(s) 254
SstI GAGCTC 1 cut(s) 120
StyD4I CCNGG 2 cut(s) 1233, 1269
StyI CCWWGG 2 cut(s) 458, 630
TaaI ACNGT 5 cut(s) 188, 454, 690, 1284, 1346
TaiI ACGT 2 cut(s) 87, 991
TaqI TCGA 6 cut(s) 30, 120, 770, 883, 932, 985
TatI WGTACW 2 cut(s) 1197, 1608
TfiI GAWTC 5 cut(s) 518, 1238, 1523, 1700, 2111
Tru1I TTAA 9 cut(s) 707, 716, 734, 1116, 1202, 1325, 1544, 1817, 1841
Tru9I TTAA 9 cut(s) 707, 716, 734, 1116, 1202, 1325, 1544, 1817, 1841
TscAI CASTG 3 cut(s) 427, 445, 1289
TseFI GTSAC 1 cut(s) 941
TseI GCWGC 5 cut(s) 221, 1438, 1441, 1777, 1780
Tsp45I GTSAC 1 cut(s) 941
TspGWI ACGGA 2 cut(s) 566, 1690
TspRI CASTG 3 cut(s) 427, 445, 1289
Van91I CCANNNNNTGG 2 cut(s) 2012, 2081
Vha464I CTTAAG 2 cut(s) 1201, 1324
VpaK11BI GGWCC 1 cut(s) 2072
VspI ATTAAT 1 cut(s) 734
XapI RAATTY 5 cut(s) 720, 967, 1249, 1592, 1985
XbaI TCTAGA 3 cut(s) 77, 1528, 1624
XceI RCATGY 2 cut(s) 949, 1978
XcmI CCANNNNNNNNNTGG 1 cut(s) 284
XhoI CTCGAG 1 cut(s) 119
ZrmI AGTACT 1 cut(s) 1199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.