MD07G1293900.v1.1

Protein phosphatase 2C 57-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
35508622 .. 35512046
3425 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1293900.v1.1.491

Sequence Viewer

Length: 1167 bp
ATGACTTTGACAAGCCCACAGCTGCAGAGGTTCGTCCTAACCAAATACCACGGCGGCTTATACAAGACTGCCGCCGCAAAAAGCAGCTTTAACATAAGAGCAAGAAGCAGAAGCTGCTCGGCGATTGCCATCGACACGCCGGGTTCTTCCCTTACCGACGTTGCTGGAATCCGATGGGGTTCGACTAGTCTGCAGGGTGCCCGGGAGGAGATGGAAGACGCCGTCGTTGTCCGGTCTGAAGGCCTTGATGAGTTCTCATTTGCCGCCGTTTTTGACGGCCATGCAGGGTTCAACTCGGTCAAGTTCCTCAGAGATGAGCTCTACAAGGAGTGTTGTGCGGCTTTGCAGGGTGGGCTGCTACTACGTGGAAACGACTTCAAGGCCATTAGAGAGGCATTGCTGGAGACGTTCGAAAAAGTTGACTCTAAATTGTTAAATTGGCTCGAAAGCAATGGGGAGAAAGACGAATCTGGTTCGACAGCTACCCTTATGTTCGTTGGAAACGATACGCTGGTTATTTCACATGTTGGTGATTCTTGTGTGGTTCAATCTTGTTCTGGAAAGGCAGAGGTTCTTACGCATCCTCATAGACCGTACGGGAGCAACAAGGCTTCTCTTCAAGAAATCAAAAGAATCAGAGAAGAAGGTGGATGGATCAGCAATGGAAGAATTTGTGGCGACATTGCTGTTTCTCGTGCGTTTGGTGACATGCGGTTCAAGACAAAGAAAAACGAGATGCTGAAAAAAGGAGTTGAAGAAAGGAGATGGACAGAAAAATTTGCTTCTCGAGTACAATTCAACGGAGACCTAGTTACTGCATCTCCAGACGTTTTTCAAGTAACTTTCGGGACAGATTCAGAATTTGTTCTGTTAGCATCAGATGGCTTATGGGACTACATAAACAGCTCAGATGCGGTGACTTTTGTAAGGAATCAGCTTCGAAAACACGGAGACGTTCAGCTAGCTTGCGACGCGCTTGCTGAAGCTGCTCTGGATCAACGCTCGCAAGATAACATCAGCATTGTTATTGCAGATTTAGGGCGGACAGACTGGCAAGGTTTGCCATTTCAACAACAAAATGTTGTATATGAATTCGGCCAAGCTTTTGCTACGGTTGGGATTGTGTCGCTTGGAATTTGGATCTCAACATCCTTGCTTTCGACATGA

Protein Analysis

389

Amino Acids

42.61

Weight (kDa)

5.54

Isoelectric Point (pI)

43.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PP2C PF00481 60 - 339 1.1e-51 Protein phosphatase 2C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 197
AccII CGCG 1 cut(s) 974
AciI CCGC 8 cut(s) 54, 72, 75, 264, 338, 712, 914, 1042
AclWI GGATC 3 cut(s) 662, 1002, 1148
AcoI YGGCCR 2 cut(s) 277, 1096
AcsI RAATTY 5 cut(s) 669, 776, 860, 1091, 1134
AcuI CTGAAG 2 cut(s) 258, 1002
AcyI GRCGYC 1 cut(s) 219
AfaI GTAC 2 cut(s) 596, 792
AflIII ACRYGT 1 cut(s) 523
AgsI TTSAA 9 cut(s) 292, 379, 548, 620, 718, 755, 799, 836, 1070
AhlI ACTAGT 1 cut(s) 185
Alw21I GWGCWC 1 cut(s) 321
Alw26I GTCTC 3 cut(s) 398, 798, 945
AlwI GGATC 3 cut(s) 662, 1002, 1148
AlwNI CAGNNNCTG 1 cut(s) 114
Ama87I CYCGRG 2 cut(s) 201, 786
AoxI GGCC 4 cut(s) 241, 277, 381, 1096
ApeKI GCWGC 5 cut(s) 22, 84, 114, 355, 986
ApoI RAATTY 5 cut(s) 669, 776, 860, 1091, 1134
Asp700I GAANNNNTTC 1 cut(s) 864
AspLEI GCGC 1 cut(s) 976
AsuC2I CCSGG 3 cut(s) 141, 202, 203
AsuHPI GGTGA 3 cut(s) 542, 716, 928
AsuII TTCGAA 2 cut(s) 411, 940
AsuNHI GCTAGC 1 cut(s) 961
AvaI CYCGRG 2 cut(s) 201, 786
BaeGI GKGCMC 1 cut(s) 202
BaeI ACNNNNGTAYC 2 cut(s) 498, 531
BanI GGYRCC 1 cut(s) 197
BanII GRGCYC 1 cut(s) 321
BauI CACGAG 1 cut(s) 693
BbsI GAAGAC 1 cut(s) 222
Bbv12I GWGCWC 1 cut(s) 321
BbvI GCAGC 5 cut(s) 9, 96, 101, 342, 973
BccI CCATC 6 cut(s) 137, 168, 205, 645, 759, 875
BceAI ACGGC 4 cut(s) 67, 206, 251, 292
BcgI CGANNNNNNTGC 4 cut(s) 172, 206, 959, 993
BcnI CCSGG 3 cut(s) 141, 202, 203
BcoDI GTCTC 3 cut(s) 398, 798, 945
BcuI ACTAGT 1 cut(s) 185
BfaI CTAG 3 cut(s) 186, 809, 962
BfmI CTRYAG 2 cut(s) 23, 191
Bme1390I CCNGG 3 cut(s) 141, 202, 203
BmeT110I CYCGRG 2 cut(s) 201, 786
BmiI GGNNCC 1 cut(s) 199
BmrFI CCNGG 3 cut(s) 141, 202, 203
BmsI GCATC 5 cut(s) 589, 726, 827, 884, 901
BmtI GCTAGC 1 cut(s) 965
BpiI GAAGAC 1 cut(s) 222
BplI GAGNNNNNCTC 2 cut(s) 303, 335
BpmI CTGGAG 2 cut(s) 422, 807
Bpu14I TTCGAA 2 cut(s) 411, 940
BpuMI CCSGG 3 cut(s) 141, 202, 203
BsaAI YACGTR 1 cut(s) 365
BsaBI GATNNNNATC 1 cut(s) 128
BsaHI GRCGYC 1 cut(s) 219
BsaI GGTCTC 1 cut(s) 798
BsaJI CCNNGG 2 cut(s) 49, 201
BsaWI WCCGGW 1 cut(s) 231
BsaXI ACNNNNNCTCC 4 cut(s) 795, 805, 825, 835
Bse1I ACTGG 1 cut(s) 1055
Bse3DI GCAATG 4 cut(s) 395, 457, 667, 681
Bse8I GATNNNNATC 1 cut(s) 128
BseDI CCNNGG 2 cut(s) 49, 201
BseGI GGATG 3 cut(s) 580, 656, 1148
BseJI GATNNNNATC 1 cut(s) 128
BseMI GCAATG 4 cut(s) 395, 457, 667, 681
BseMII CTCAG 2 cut(s) 322, 921
BseNI ACTGG 1 cut(s) 1055
BseRI GAGGAG 1 cut(s) 221
BseSI GKGCMC 1 cut(s) 202
BseXI GCAGC 5 cut(s) 9, 96, 101, 342, 973
Bsh1236I CGCG 1 cut(s) 974
BshFI GGCC 4 cut(s) 243, 279, 383, 1098
BshNI GGYRCC 1 cut(s) 197
BsiHKAI GWGCWC 1 cut(s) 321
BsiHKCI CYCGRG 2 cut(s) 201, 786
BsiSI CCGG 3 cut(s) 140, 202, 232
BsiWI CGTACG 1 cut(s) 594
BslFI GGGAC 2 cut(s) 862, 905
BsmAI GTCTC 3 cut(s) 398, 798, 945
BsmBI CGTCTC 2 cut(s) 398, 945
BsmFI GGGAC 2 cut(s) 862, 905
BsnI GGCC 4 cut(s) 243, 279, 383, 1098
Bso31I GGTCTC 1 cut(s) 798
BsoBI CYCGRG 2 cut(s) 201, 786
Bsp119I TTCGAA 2 cut(s) 411, 940
Bsp1286I GDGCHC 2 cut(s) 202, 321
Bsp143I GATC 3 cut(s) 654, 994, 1140
BspACI CCGC 8 cut(s) 54, 72, 75, 264, 338, 712, 914, 1042
BspANI GGCC 4 cut(s) 243, 279, 383, 1098
BspCNI CTCAG 2 cut(s) 321, 920
BspFNI CGCG 1 cut(s) 974
BspLI GGNNCC 1 cut(s) 199
BspMAI CTGCAG 2 cut(s) 27, 195
BspOI GCTAGC 1 cut(s) 965
BspPI GGATC 3 cut(s) 662, 1002, 1148
BspT104I TTCGAA 2 cut(s) 411, 940
BspT107I GGYRCC 1 cut(s) 197
BspTNI GGTCTC 1 cut(s) 798
BsrDI GCAATG 4 cut(s) 395, 457, 667, 681
BsrI ACTGG 1 cut(s) 1055
BssECI CCNNGG 2 cut(s) 49, 201
BssMI GATC 3 cut(s) 654, 994, 1140
BssNI GRCGYC 1 cut(s) 219
BssSI CACGAG 1 cut(s) 693
Bst2BI CACGAG 1 cut(s) 693
Bst4CI ACNGT 2 cut(s) 594, 1114
Bst6I CTCTTC 1 cut(s) 621
BstACI GRCGYC 1 cut(s) 219
BstAPI GCANNNNNTGC 2 cut(s) 114, 1060
BstBAI YACGTR 1 cut(s) 365
BstBI TTCGAA 2 cut(s) 411, 940
BstC8I GCNNGC 4 cut(s) 963, 967, 978, 1004
BstDEI CTNAG 2 cut(s) 308, 907
BstDSI CCRYGG 1 cut(s) 49
BstF5I GGATG 3 cut(s) 580, 656, 1148
BstFNI CGCG 1 cut(s) 974
BstHHI GCGC 1 cut(s) 976
BstKTI GATC 3 cut(s) 657, 997, 1143
BstMAI GTCTC 3 cut(s) 398, 798, 945
BstMBI GATC 3 cut(s) 654, 994, 1140
BstMWI GCNNNNNNNGC 5 cut(s) 114, 352, 971, 986, 1060
BstNSI RCATGY 2 cut(s) 527, 712
BstSCI CCNGG 3 cut(s) 139, 200, 201
BstSFI CTRYAG 2 cut(s) 23, 191
BstSLI GKGCMC 1 cut(s) 202
BstUI CGCG 1 cut(s) 974
BstV1I GCAGC 5 cut(s) 9, 96, 101, 342, 973
BstV2I GAAGAC 1 cut(s) 222
BstX2I RGATCY 1 cut(s) 1140
BstYI RGATCY 1 cut(s) 1140
BsuRI GGCC 4 cut(s) 243, 279, 383, 1098
BtgI CCRYGG 1 cut(s) 49
BtsCI GGATG 3 cut(s) 580, 656, 1148
Cac8I GCNNGC 4 cut(s) 963, 967, 978, 1004
CaiI CAGNNNCTG 1 cut(s) 114
CfoI GCGC 1 cut(s) 976
Cfr9I CCCGGG 1 cut(s) 201
CseI GACGC 2 cut(s) 227, 980
Csp6I GTAC 2 cut(s) 595, 791
CviAII CATG 4 cut(s) 281, 524, 709, 1164
CviQI GTAC 2 cut(s) 595, 791
DdeI CTNAG 2 cut(s) 308, 907
DpnI GATC 3 cut(s) 656, 996, 1142
DpnII GATC 3 cut(s) 654, 994, 1140
EaeI YGGCCR 2 cut(s) 277, 1096
Eam1104I CTCTTC 1 cut(s) 621
EarI CTCTTC 1 cut(s) 621
EciI GGCGGA 1 cut(s) 1057
Ecl136II GAGCTC 1 cut(s) 319
Eco147I AGGCCT 1 cut(s) 243
Eco24I GRGCYC 1 cut(s) 321
Eco31I GGTCTC 1 cut(s) 798
Eco53kI GAGCTC 1 cut(s) 319
Eco57I CTGAAG 2 cut(s) 258, 1002
Eco88I CYCGRG 2 cut(s) 201, 786
EcoICRI GAGCTC 1 cut(s) 319
EcoRI GAATTC 1 cut(s) 1091
EcoT38I GRGCYC 1 cut(s) 321
Esp3I CGTCTC 2 cut(s) 398, 945
FaeI CATG 4 cut(s) 284, 527, 712, 1167
FaqI GGGAC 2 cut(s) 862, 905
FatI CATG 4 cut(s) 280, 523, 708, 1163
FokI GGATG 3 cut(s) 567, 663, 1135
FriOI GRGCYC 1 cut(s) 321
FspBI CTAG 3 cut(s) 186, 809, 962
GlaI GCGC 1 cut(s) 975
GsuI CTGGAG 2 cut(s) 422, 807
HaeIII GGCC 4 cut(s) 243, 279, 383, 1098
HapII CCGG 3 cut(s) 140, 202, 232
HgaI GACGC 2 cut(s) 227, 980
HhaI GCGC 1 cut(s) 976
Hin1I GRCGYC 1 cut(s) 219
Hin1II CATG 4 cut(s) 284, 527, 712, 1167
Hin6I GCGC 1 cut(s) 974
HinP1I GCGC 1 cut(s) 974
HincII GTYRAC 1 cut(s) 421
HindII GTYRAC 1 cut(s) 421
HindIII AAGCTT 1 cut(s) 1101
HinfI GANTC 7 cut(s) 168, 422, 467, 533, 633, 854, 931
HpaII CCGG 3 cut(s) 140, 202, 232
HphI GGTGA 3 cut(s) 542, 716, 928
Hpy166II GTNNAC 1 cut(s) 421
Hpy188I TCNGA 7 cut(s) 173, 238, 311, 638, 859, 880, 910
Hpy188III TCNNGA 7 cut(s) 558, 620, 718, 786, 824, 847, 992
Hpy8I GTNNAC 1 cut(s) 421
Hpy99I CGWCG 3 cut(s) 161, 227, 974
HpyAV CCTTC 2 cut(s) 233, 638
HpyCH4III ACNGT 2 cut(s) 594, 1114
HpyCH4IV ACGT 5 cut(s) 159, 364, 407, 828, 954
HpyCH4V TGCA 6 cut(s) 25, 193, 284, 346, 818, 1031
HpyF10VI GCNNNNNNNGC 5 cut(s) 114, 352, 971, 986, 1060
HpyF3I CTNAG 2 cut(s) 308, 907
HpySE526I ACGT 5 cut(s) 159, 364, 407, 828, 954
Hsp92I GRCGYC 1 cut(s) 219
Hsp92II CATG 4 cut(s) 284, 527, 712, 1167
HspAI GCGC 1 cut(s) 974
Kzo9I GATC 3 cut(s) 654, 994, 1140
LmnI GCTCC 1 cut(s) 600
Lsp1109I GCAGC 5 cut(s) 9, 96, 101, 342, 973
LweI GCATC 5 cut(s) 589, 726, 827, 884, 901
MaeI CTAG 3 cut(s) 186, 809, 962
MaeII ACGT 5 cut(s) 159, 364, 407, 828, 954
MaeIII GTNAC 4 cut(s) 704, 811, 838, 916
MalI GATC 3 cut(s) 656, 996, 1142
MboI GATC 3 cut(s) 654, 994, 1140
MboII GAAGA 6 cut(s) 138, 227, 608, 653, 678, 767
MflI RGATCY 1 cut(s) 1140
MhlI GDGCHC 2 cut(s) 202, 321
MluCI AATT 8 cut(s) 428, 436, 669, 776, 794, 860, 1091, 1134
MlyI GAGTC 1 cut(s) 416
MmeI TCCRAC 1 cut(s) 478
MnlI CCTC 6 cut(s) 21, 199, 317, 385, 562, 594
MroXI GAANNNNTTC 1 cut(s) 864
MseI TTAA 2 cut(s) 90, 434
MslI CAYNNNNRTG 1 cut(s) 528
MspA1I CMGCKG 1 cut(s) 22
MspI CCGG 3 cut(s) 140, 202, 232
MspR9I CCNGG 3 cut(s) 141, 202, 203
MvnI CGCG 1 cut(s) 974
MwoI GCNNNNNNNGC 5 cut(s) 114, 352, 971, 986, 1060
NciI CCSGG 3 cut(s) 141, 202, 203
NdeII GATC 3 cut(s) 654, 994, 1140
NheI GCTAGC 1 cut(s) 961
NlaIII CATG 4 cut(s) 284, 527, 712, 1167
NlaIV GGNNCC 1 cut(s) 199
NmeAIII GCCGAG 1 cut(s) 98
NmuCI GTSAC 2 cut(s) 704, 916
NspI RCATGY 2 cut(s) 527, 712
NspV TTCGAA 2 cut(s) 411, 940
PaeR7I CTCGAG 1 cut(s) 786
PceI AGGCCT 1 cut(s) 243
PciI ACATGT 1 cut(s) 523
PcsI WCGNNNNNNNCGW 1 cut(s) 501
PdmI GAANNNNTTC 1 cut(s) 864
PfeI GAWTC 6 cut(s) 168, 467, 533, 633, 854, 931
Pfl23II CGTACG 1 cut(s) 594
PflFI GACNNNGTC 1 cut(s) 221
PleI GAGTC 1 cut(s) 416
PpsI GAGTC 1 cut(s) 416
Ppu21I YACGTR 1 cut(s) 365
PscI ACATGT 1 cut(s) 523
Psp124BI GAGCTC 1 cut(s) 321
PspLI CGTACG 1 cut(s) 594
PspN4I GGNNCC 1 cut(s) 199
PstI CTGCAG 2 cut(s) 27, 195
PstNI CAGNNNCTG 1 cut(s) 114
PsuI RGATCY 1 cut(s) 1140
PsyI GACNNNGTC 1 cut(s) 221
PvuII CAGCTG 1 cut(s) 22
RsaI GTAC 2 cut(s) 596, 792
RsaNI GTAC 2 cut(s) 595, 791
RseI CAYNNNNRTG 1 cut(s) 528
SacI GAGCTC 1 cut(s) 321
SaqAI TTAA 2 cut(s) 90, 434
Sau3AI GATC 3 cut(s) 654, 994, 1140
SchI GAGTC 1 cut(s) 416
ScrFI CCNGG 3 cut(s) 141, 202, 203
SduI GDGCHC 2 cut(s) 202, 321
SfaNI GCATC 5 cut(s) 589, 726, 827, 884, 901
SfcI CTRYAG 2 cut(s) 23, 191
Sfr274I CTCGAG 1 cut(s) 786
SfuI TTCGAA 2 cut(s) 411, 940
SlaI CTCGAG 1 cut(s) 786
SmaI CCCGGG 1 cut(s) 203
SmiMI CAYNNNNRTG 1 cut(s) 528
SmlI CTYRAG 1 cut(s) 786
SmoI CTYRAG 1 cut(s) 786
SpeI ACTAGT 1 cut(s) 185
Sse9I AATT 8 cut(s) 428, 436, 669, 776, 794, 860, 1091, 1134
SseBI AGGCCT 1 cut(s) 243
SsiI CCGC 8 cut(s) 54, 72, 75, 264, 338, 712, 914, 1042
SspMI CTAG 3 cut(s) 186, 809, 962
SstI GAGCTC 1 cut(s) 321
StuI AGGCCT 1 cut(s) 243
StyD4I CCNGG 3 cut(s) 139, 200, 201
TaaI ACNGT 2 cut(s) 594, 1114
TaiI ACGT 5 cut(s) 162, 367, 410, 831, 957
TaqI TCGA 8 cut(s) 132, 182, 411, 444, 476, 787, 940, 1160
TaqII GACCGA 1 cut(s) 286
TasI AATT 8 cut(s) 428, 436, 669, 776, 794, 860, 1091, 1134
TatI WGTACW 1 cut(s) 790
TauI GCSGC 5 cut(s) 57, 74, 77, 266, 341
TfiI GAWTC 6 cut(s) 168, 467, 533, 633, 854, 931
Tru1I TTAA 2 cut(s) 90, 434
Tru9I TTAA 2 cut(s) 90, 434
TseFI GTSAC 2 cut(s) 704, 916
TseI GCWGC 5 cut(s) 22, 84, 114, 355, 986
Tsp45I GTSAC 2 cut(s) 704, 916
TspDTI ATGAA 1 cut(s) 1104
TspGWI ACGGA 2 cut(s) 816, 963
TspMI CCCGGG 1 cut(s) 201
Tth111I GACNNNGTC 1 cut(s) 221
XapI RAATTY 5 cut(s) 669, 776, 860, 1091, 1134
XceI RCATGY 2 cut(s) 527, 712
XhoI CTCGAG 1 cut(s) 786
XmaI CCCGGG 1 cut(s) 201
XmnI GAANNNNTTC 1 cut(s) 864
XspI CTAG 3 cut(s) 186, 809, 962
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.