Rmu_sc0003181.1_g000018

Protein phosphatase 2C 57-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003181.1
Physical Location & Seq
Forward (+)
44785 .. 45350
566 bp
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UTR
Exon/CDS
Intron
Rmu_sc0003181.1_g000018.1.cds

Sequence Viewer

Length: 219 bp
atgaaaccttgtggaaaccttgttactgcatctccagacgtttatcaagcaagtctaggggcagactcagaatttctagtgttagcatctgatggtttatgggattacataaacagttcagatgcagtttcttttgtaaggaatcagcttcgacaacatggagatgtccagctagcttgttatgcgcttgctgaagctgctctggcaacaactaattga

Protein Analysis

72

Amino Acids

7.66

Weight (kDa)

4.19

Isoelectric Point (pI)

30.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 71
AcuI CTGAAG 1 cut(s) 213
AluBI AGCT 4 cut(s) 148, 172, 176, 197
AluI AGCT 4 cut(s) 148, 172, 176, 197
ApeKI GCWGC 1 cut(s) 197
ApoI RAATTY 1 cut(s) 71
AspLEI GCGC 1 cut(s) 187
AsuNHI GCTAGC 1 cut(s) 172
BbvI GCAGC 1 cut(s) 184
BccI CCATC 1 cut(s) 86
BfaI CTAG 3 cut(s) 56, 77, 173
BisI GCNGC 1 cut(s) 198
BlsI GCNGC 1 cut(s) 199
BmsI GCATC 3 cut(s) 38, 95, 112
BmtI GCTAGC 1 cut(s) 176
BpmI CTGGAG 1 cut(s) 18
BsaXI ACNNNNNCTCC 2 cut(s) 16, 46
BseMII CTCAG 1 cut(s) 81
BseXI GCAGC 1 cut(s) 184
BspCNI CTCAG 1 cut(s) 80
BspOI GCTAGC 1 cut(s) 176
Bst4CI ACNGT 1 cut(s) 116
BstC8I GCNNGC 2 cut(s) 174, 189
BstDEI CTNAG 1 cut(s) 67
BstHHI GCGC 1 cut(s) 187
BstMWI GCNNNNNNNGC 3 cut(s) 182, 197, 203
BstV1I GCAGC 1 cut(s) 184
Cac8I GCNNGC 2 cut(s) 174, 189
CfoI GCGC 1 cut(s) 187
CviAII CATG 1 cut(s) 158
CviJI RGCY 4 cut(s) 148, 172, 176, 197
CviKI_1 RGCY 4 cut(s) 148, 172, 176, 197
DdeI CTNAG 1 cut(s) 67
Eco57I CTGAAG 1 cut(s) 213
FaeI CATG 1 cut(s) 161
FaiI YATR 4 cut(s) 100, 110, 159, 183
FatI CATG 1 cut(s) 157
Fnu4HI GCNGC 1 cut(s) 198
Fsp4HI GCNGC 1 cut(s) 198
FspBI CTAG 3 cut(s) 56, 77, 173
GlaI GCGC 1 cut(s) 186
GluI GCNGC 1 cut(s) 198
GsuI CTGGAG 1 cut(s) 18
HhaI GCGC 1 cut(s) 187
Hin1II CATG 1 cut(s) 161
Hin6I GCGC 1 cut(s) 185
HinP1I GCGC 1 cut(s) 185
HinfI GANTC 2 cut(s) 65, 142
Hpy188I TCNGA 3 cut(s) 70, 91, 121
Hpy188III TCNNGA 1 cut(s) 35
HpyCH4III ACNGT 1 cut(s) 116
HpyCH4IV ACGT 1 cut(s) 39
HpyCH4V TGCA 2 cut(s) 29, 125
HpyF10VI GCNNNNNNNGC 3 cut(s) 182, 197, 203
HpyF3I CTNAG 1 cut(s) 67
HpySE526I ACGT 1 cut(s) 39
Hsp92II CATG 1 cut(s) 161
HspAI GCGC 1 cut(s) 185
LpnPI CCDG 3 cut(s) 48, 182, 188
Lsp1109I GCAGC 1 cut(s) 184
LweI GCATC 3 cut(s) 38, 95, 112
MaeI CTAG 3 cut(s) 56, 77, 173
MaeII ACGT 1 cut(s) 39
MaeIII GTNAC 1 cut(s) 22
MluCI AATT 2 cut(s) 71, 214
MlyI GAGTC 1 cut(s) 59
MslI CAYNNNNRTG 1 cut(s) 162
MwoI GCNNNNNNNGC 3 cut(s) 182, 197, 203
NheI GCTAGC 1 cut(s) 172
NlaIII CATG 1 cut(s) 161
PfeI GAWTC 1 cut(s) 142
PkrI GCNGC 1 cut(s) 199
PleI GAGTC 1 cut(s) 59
PpsI GAGTC 1 cut(s) 59
RseI CAYNNNNRTG 1 cut(s) 162
SatI GCNGC 1 cut(s) 198
SchI GAGTC 1 cut(s) 59
SetI ASST 7 cut(s) 10, 21, 42, 150, 174, 178, 199
SfaNI GCATC 3 cut(s) 38, 95, 112
SmiMI CAYNNNNRTG 1 cut(s) 162
Sse9I AATT 2 cut(s) 71, 214
SspMI CTAG 3 cut(s) 56, 77, 173
TaaI ACNGT 1 cut(s) 116
TaiI ACGT 1 cut(s) 42
TaqI TCGA 1 cut(s) 151
TasI AATT 2 cut(s) 71, 214
TfiI GAWTC 1 cut(s) 142
TseI GCWGC 1 cut(s) 197
TspDTI ATGAA 1 cut(s) 17
XapI RAATTY 1 cut(s) 71
XspI CTAG 3 cut(s) 56, 77, 173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.