MD12G1016600.v1.1

phosphopyruvate hydratase activity

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Forward (+)
1648150 .. 1651933
3784 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1016600.v1.1.491

Sequence Viewer

Length: 1335 bp
ATGGCGACGATCCAGAGCGTGAAGGCTAGGCAGATCTTCGACAGCCGTGGCAATCCCACCGTCGAGGTCGATATCATACTGTCCGATGGCACTTTGGCCAGAGCCGCCGTTCCAAGTGGTGCATCCACCGGAGTTTACGAGGCCCTTGAGTTGCGCGATGGAGGTAAAGACTACCTCGGAAAGGGTGTATCGAAGGCTGTGAACAATGTCAACTCAATCATCGGCCCTGCTTTGATCGGCAAGGACCCAAGTGAACAGACTGCTATTGACAACTTCATGGTTCAACAGCTCGATGGAACTGTTAACGAGTGGGGTTGGTGCAAACAAAAGCTTGGTGCAAATGCCATCTTGGCCGTGTCTCTTGCAGTCGCCAAGGCTGGCGCTAGCGTCAAGAAAATTCCTCTGTACAAGCATATTGCCAATCTTGCTGGCAACAATAACTTAGTTTTGCCCGTTCCTGCTTTCAATGTCATCAACGGTGGATCACATGCAGGAAACAAGCTTGCAATGCAGGAGTTCATGATTCTTCCTGTTGGAGCTTCCTCATTCAAGGAAGCCATGAAGATGGGCGTGGAAGTATATCACAACCTTAAGTCTGTGATTAAAAAGAAGTACGGTCAGGATGCAACCAATGTTGGTGACGAAGGTGGATTTGCTCCTAACATCCAGGAGAACAAGGAAGGTCTTGAATTGCTCAAGACAGCCATTGAGAAGGCTGGATACACCGGCAAAGTTGTCATTGGAATGGACGTTGCTGCATCTGAGTTTTATGGATCAGATAAAACCTATGATCTGAACTTCAAGGAAGAGAAAAATGACGGTTCCCAAAAGATCTTAGGAAATGCTCTCAAGGACCTCTACAAGTCATTTGCAAGTGAGTACCCTATTGTTTCAATTGAAGATCCATTTGACCAAGATGACTGGGAACACTATGCCAAGATGACAGCTGAAGTTGGAGAAAAAGTACAAATTGTGGGAGATGATCTGTTGGTCACCAACCCCAAGAGGGTTGAGAAGGCAATCAAGGAGAAATCTTGCAATGCTCTTCTTCTCAAGGTGAATCAAATTGGATCCGTAACTGAGAGCATTGAGGCTGTAAGAATGTCCAAGAAAGCTGGATGGGGTGTGATGGCCAGCCACCGCAGTGGAGAAACCGAGGATACCTTCATTGCTGATCTCTCCGTGGGTTTGGCCACGGGACAAATCAAGACAGGAGCTCCCTGTAGGTCAGAGCGTCTTGCCAAGTACAACCAGCTCTTGCGAATTGAGGAGGAGCTCGGTTCAGAGGCAGTGTATGCTGGAGCCAAGTTCCGTGTGCCCGTGGAGCCCTATTAG

Protein Analysis

445

Amino Acids

47.8

Weight (kDa)

5.77

Isoelectric Point (pI)

36.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Enolase_N PF03952 4 - 139 2.6e-53 Enolase, N-terminal domain
Enolase_C PF00113 148 - 438 7.6e-159 Enolase, C-terminal TIM barrel domain
MAAL_C PF07476 291 - 401 2.7e-06 Methylaspartate ammonia-lyase C-terminus
MR_MLE_C PF13378 292 - 406 1.6e-08 Enolase C-terminal domain-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 156
AciI CCGC 2 cut(s) 105, 1141
AclWI GGATC 6 cut(s) 4, 490, 781, 896, 1065, 1078
AcoI YGGCCR 4 cut(s) 96, 351, 1131, 1191
AcsI RAATTY 1 cut(s) 396
AcuI CTGAAG 1 cut(s) 969
AfaI GTAC 5 cut(s) 407, 614, 881, 966, 1247
AfiI CCNNNNNNNGG 2 cut(s) 181, 1006
AflII CTTAAG 1 cut(s) 590
AgsI TTSAA 7 cut(s) 284, 466, 550, 689, 802, 894, 899
AjnI CCWGG 1 cut(s) 666
AleI CACNNNNGTG 1 cut(s) 1143
AluBI AGCT 9 cut(s) 289, 331, 502, 539, 947, 1115, 1217, 1255, 1276
AluI AGCT 9 cut(s) 289, 331, 502, 539, 947, 1115, 1217, 1255, 1276
Alw21I GWGCWC 2 cut(s) 1219, 1278
Alw26I GTCTC 1 cut(s) 363
AlwI GGATC 6 cut(s) 4, 490, 781, 896, 1065, 1078
AoxI GGCC 6 cut(s) 96, 141, 223, 351, 1131, 1191
ApeKI GCWGC 1 cut(s) 755
ApoI RAATTY 1 cut(s) 396
AspLEI GCGC 2 cut(s) 156, 383
AspS9I GGNCC 4 cut(s) 142, 224, 244, 853
AsuHPI GGTGA 3 cut(s) 650, 985, 1069
AsuNHI GCTAGC 1 cut(s) 383
AvaII GGWCC 2 cut(s) 244, 853
BaeGI GKGCMC 1 cut(s) 1320
BalI TGGCCA 3 cut(s) 98, 1133, 1193
BamHI GGATCC 1 cut(s) 1070
BanII GRGCYC 3 cut(s) 1219, 1278, 1329
BarI GAAGNNNNNNTAC 2 cut(s) 704, 736
Bbv12I GWGCWC 2 cut(s) 1219, 1278
BbvI GCAGC 1 cut(s) 742
BccI CCATC 7 cut(s) 80, 152, 287, 353, 559, 1113, 1123
BceAI ACGGC 3 cut(s) 30, 92, 338
BciT130I CCWGG 1 cut(s) 668
BciVI GTATCC 2 cut(s) 713, 1153
BcoDI GTCTC 1 cut(s) 363
BfaI CTAG 2 cut(s) 27, 384
BfmI CTRYAG 1 cut(s) 1222
BfoI RGCGCY 1 cut(s) 384
BfrI CTTAAG 1 cut(s) 590
BfuI GTATCC 2 cut(s) 713, 1153
BglI GCCNNNNNGGC 1 cut(s) 350
BglII AGATCT 2 cut(s) 33, 831
BisI GCNGC 2 cut(s) 105, 756
BlsI GCNGC 2 cut(s) 106, 757
Bme1390I CCNGG 1 cut(s) 668
Bme18I GGWCC 2 cut(s) 244, 853
BmgT120I GGNCC 4 cut(s) 142, 224, 244, 853
BmiI GGNNCC 5 cut(s) 246, 823, 1072, 1303, 1326
BmrFI CCNGG 1 cut(s) 668
BmrI ACTGGG 1 cut(s) 931
BmsI GCATC 3 cut(s) 131, 613, 767
BmtI GCTAGC 1 cut(s) 387
BmuI ACTGGG 1 cut(s) 931
BpmI CTGGAG 1 cut(s) 1320
BpuEI CTTGAG 4 cut(s) 167, 680, 833, 1037
BsaJI CCNNGG 7 cut(s) 46, 175, 372, 1155, 1182, 1194, 1320
BsaWI WCCGGW 1 cut(s) 128
BsaXI ACNNNNNCTCC 4 cut(s) 948, 978, 1201, 1231
Bsc4I CCNNNNNNNGG 2 cut(s) 181, 1006
Bse118I RCCGGY 1 cut(s) 725
Bse1I ACTGG 1 cut(s) 926
Bse3DI GCAATG 3 cut(s) 513, 1045, 1167
BseBI CCWGG 1 cut(s) 668
BseDI CCNNGG 7 cut(s) 46, 175, 372, 1155, 1182, 1194, 1320
BseGI GGATG 4 cut(s) 122, 628, 663, 1124
BseLI CCNNNNNNNGG 2 cut(s) 181, 1006
BseMI GCAATG 3 cut(s) 513, 1045, 1167
BseMII CTCAG 2 cut(s) 753, 1071
BseNI ACTGG 1 cut(s) 926
BseRI GAGGAG 2 cut(s) 1283, 1286
BseSI GKGCMC 1 cut(s) 1320
BseXI GCAGC 1 cut(s) 742
Bsh1236I CGCG 1 cut(s) 156
BshFI GGCC 6 cut(s) 98, 143, 225, 353, 1133, 1193
BsiHKAI GWGCWC 2 cut(s) 1219, 1278
BsiSI CCGG 2 cut(s) 129, 726
BslFI GGGAC 1 cut(s) 1212
BslI CCNNNNNNNGG 2 cut(s) 181, 1006
BsmAI GTCTC 1 cut(s) 363
BsmFI GGGAC 1 cut(s) 1212
BsnI GGCC 6 cut(s) 98, 143, 225, 353, 1133, 1193
Bsp1286I GDGCHC 4 cut(s) 1219, 1278, 1320, 1329
Bsp1407I TGTACA 1 cut(s) 405
BspACI CCGC 2 cut(s) 105, 1141
BspANI GGCC 6 cut(s) 98, 143, 225, 353, 1133, 1193
BspCNI CTCAG 2 cut(s) 754, 1072
BspFNI CGCG 1 cut(s) 156
BspHI TCATGA 1 cut(s) 519
BspLI GGNNCC 5 cut(s) 246, 823, 1072, 1303, 1326
BspOI GCTAGC 1 cut(s) 387
BspPI GGATC 6 cut(s) 4, 490, 781, 896, 1065, 1078
BspQI GCTCTTC 1 cut(s) 1050
BspTI CTTAAG 1 cut(s) 590
BsrDI GCAATG 3 cut(s) 513, 1045, 1167
BsrFI RCCGGY 1 cut(s) 725
BsrGI TGTACA 1 cut(s) 405
BsrI ACTGG 1 cut(s) 926
BssAI RCCGGY 1 cut(s) 725
BssECI CCNNGG 7 cut(s) 46, 175, 372, 1155, 1182, 1194, 1320
BssT1I CCWWGG 1 cut(s) 372
Bst2UI CCWGG 1 cut(s) 668
Bst4CI ACNGT 6 cut(s) 61, 81, 301, 479, 617, 821
Bst6I CTCTTC 2 cut(s) 801, 1050
BstAFI CTTAAG 1 cut(s) 590
BstAPI GCANNNNNTGC 1 cut(s) 1295
BstAUI TGTACA 1 cut(s) 405
BstC8I GCNNGC 5 cut(s) 379, 385, 430, 504, 1135
BstDEI CTNAG 4 cut(s) 442, 762, 835, 1080
BstDSI CCRYGG 4 cut(s) 46, 1182, 1194, 1320
BstEII GGTNACC 1 cut(s) 991
BstENI CCTNNNNNAGG 1 cut(s) 179
BstF5I GGATG 4 cut(s) 122, 628, 663, 1124
BstFNI CGCG 1 cut(s) 156
BstH2I RGCGCY 1 cut(s) 384
BstHHI GCGC 2 cut(s) 156, 383
BstMAI GTCTC 1 cut(s) 363
BstMWI GCNNNNNNNGC 6 cut(s) 104, 350, 425, 508, 1295, 1324
BstNI CCWGG 1 cut(s) 668
BstNSI RCATGY 1 cut(s) 491
BstPI GGTNACC 1 cut(s) 991
BstSCI CCNGG 1 cut(s) 666
BstSFI CTRYAG 1 cut(s) 1222
BstSLI GKGCMC 1 cut(s) 1320
BstUI CGCG 1 cut(s) 156
BstV1I GCAGC 1 cut(s) 742
BstX2I RGATCY 4 cut(s) 33, 831, 901, 1070
BstXI CCANNNNNNTGG 2 cut(s) 565, 1145
BstYI RGATCY 4 cut(s) 33, 831, 901, 1070
BsuI GTATCC 2 cut(s) 713, 1153
BsuRI GGCC 6 cut(s) 98, 143, 225, 353, 1133, 1193
BtgI CCRYGG 4 cut(s) 46, 1182, 1194, 1320
BtgZI GCGATG 1 cut(s) 171
BtsCI GGATG 4 cut(s) 122, 628, 663, 1124
BtsI GCAGTG 2 cut(s) 1150, 1296
BtsIMutI CAGTG 2 cut(s) 1150, 1296
Cac8I GCNNGC 5 cut(s) 379, 385, 430, 504, 1135
CciI TCATGA 1 cut(s) 519
CfoI GCGC 2 cut(s) 156, 383
Cfr10I RCCGGY 1 cut(s) 725
Cfr13I GGNCC 4 cut(s) 142, 224, 244, 853
CseI GACGC 2 cut(s) 376, 1223
Csp6I GTAC 5 cut(s) 406, 613, 880, 965, 1246
CviAII CATG 4 cut(s) 277, 488, 520, 559
CviQI GTAC 5 cut(s) 406, 613, 880, 965, 1246
DdeI CTNAG 4 cut(s) 442, 762, 835, 1080
EaeI YGGCCR 4 cut(s) 96, 351, 1131, 1191
Eam1104I CTCTTC 2 cut(s) 801, 1050
EarI CTCTTC 2 cut(s) 801, 1050
Ecl136II GAGCTC 2 cut(s) 1217, 1276
Eco130I CCWWGG 1 cut(s) 372
Eco24I GRGCYC 3 cut(s) 1219, 1278, 1329
Eco32I GATATC 1 cut(s) 73
Eco47I GGWCC 2 cut(s) 244, 853
Eco53kI GAGCTC 2 cut(s) 1217, 1276
Eco57I CTGAAG 1 cut(s) 969
Eco91I GGTNACC 1 cut(s) 991
EcoICRI GAGCTC 2 cut(s) 1217, 1276
EcoNI CCTNNNNNAGG 1 cut(s) 179
EcoO109I RGGNCCY 3 cut(s) 142, 244, 853
EcoO65I GGTNACC 1 cut(s) 991
EcoRII CCWGG 1 cut(s) 666
EcoRV GATATC 1 cut(s) 73
EcoT14I CCWWGG 1 cut(s) 372
EcoT38I GRGCYC 3 cut(s) 1219, 1278, 1329
ErhI CCWWGG 1 cut(s) 372
FaeI CATG 4 cut(s) 280, 491, 523, 562
FaqI GGGAC 1 cut(s) 1212
FatI CATG 4 cut(s) 276, 487, 519, 558
Fnu4HI GCNGC 2 cut(s) 105, 756
FokI GGATG 4 cut(s) 109, 635, 650, 1131
FriOI GRGCYC 3 cut(s) 1219, 1278, 1329
Fsp4HI GCNGC 2 cut(s) 105, 756
FspBI CTAG 2 cut(s) 27, 384
GlaI GCGC 2 cut(s) 155, 382
GluI GCNGC 2 cut(s) 105, 756
GsuI CTGGAG 1 cut(s) 1320
HaeII RGCGCY 1 cut(s) 384
HaeIII GGCC 6 cut(s) 98, 143, 225, 353, 1133, 1193
HapII CCGG 2 cut(s) 129, 726
HgaI GACGC 2 cut(s) 376, 1223
HhaI GCGC 2 cut(s) 156, 383
Hin1II CATG 4 cut(s) 280, 491, 523, 562
Hin6I GCGC 2 cut(s) 154, 381
HinP1I GCGC 2 cut(s) 154, 381
HincII GTYRAC 2 cut(s) 211, 304
HindII GTYRAC 2 cut(s) 211, 304
HindIII AAGCTT 2 cut(s) 329, 500
HinfI GANTC 2 cut(s) 523, 1060
HpaI GTTAAC 1 cut(s) 304
HpaII CCGG 2 cut(s) 129, 726
HphI GGTGA 3 cut(s) 650, 985, 1069
Hpy166II GTNNAC 5 cut(s) 136, 202, 211, 254, 304
Hpy188I TCNGA 7 cut(s) 85, 179, 763, 778, 795, 1231, 1285
Hpy188III TCNNGA 7 cut(s) 13, 391, 520, 620, 686, 697, 1207
Hpy8I GTNNAC 5 cut(s) 136, 202, 211, 254, 304
Hpy99I CGWCG 2 cut(s) 10, 65
HpyAV CCTTC 7 cut(s) 16, 187, 638, 674, 706, 1009, 1174
HpyCH4III ACNGT 6 cut(s) 61, 81, 301, 479, 617, 821
HpyCH4IV ACGT 1 cut(s) 750
HpyF10VI GCNNNNNNNGC 6 cut(s) 104, 350, 425, 508, 1295, 1324
HpyF3I CTNAG 4 cut(s) 442, 762, 835, 1080
HpySE526I ACGT 1 cut(s) 750
Hsp92II CATG 4 cut(s) 280, 491, 523, 562
HspAI GCGC 2 cut(s) 154, 381
KspAI GTTAAC 1 cut(s) 304
LguI GCTCTTC 1 cut(s) 1050
LmnI GCTCC 7 cut(s) 536, 661, 1214, 1222, 1273, 1301, 1324
Lsp1109I GCAGC 1 cut(s) 742
LweI GCATC 3 cut(s) 131, 613, 767
MaeI CTAG 2 cut(s) 27, 384
MaeII ACGT 1 cut(s) 750
MaeIII GTNAC 3 cut(s) 638, 991, 1075
MboII GAAGA 7 cut(s) 28, 518, 574, 818, 911, 1037, 1040
MfeI CAATTG 1 cut(s) 894
MflI RGATCY 4 cut(s) 33, 831, 901, 1070
MhlI GDGCHC 4 cut(s) 1219, 1278, 1320, 1329
MlsI TGGCCA 3 cut(s) 98, 1133, 1193
MluCI AATT 6 cut(s) 396, 689, 894, 969, 1065, 1263
MluNI TGGCCA 3 cut(s) 98, 1133, 1193
MmeI TCCRAC 2 cut(s) 514, 934
Mox20I TGGCCA 3 cut(s) 98, 1133, 1193
MscI TGGCCA 3 cut(s) 98, 1133, 1193
MseI TTAA 3 cut(s) 303, 591, 603
MslI CAYNNNNRTG 3 cut(s) 563, 743, 1143
Msp20I TGGCCA 3 cut(s) 98, 1133, 1193
MspA1I CMGCKG 1 cut(s) 947
MspCI CTTAAG 1 cut(s) 590
MspI CCGG 2 cut(s) 129, 726
MspR9I CCNGG 1 cut(s) 668
MunI CAATTG 1 cut(s) 894
MvaI CCWGG 1 cut(s) 668
MvnI CGCG 1 cut(s) 156
MwoI GCNNNNNNNGC 6 cut(s) 104, 350, 425, 508, 1295, 1324
NheI GCTAGC 1 cut(s) 383
NlaIII CATG 4 cut(s) 280, 491, 523, 562
NlaIV GGNNCC 5 cut(s) 246, 823, 1072, 1303, 1326
NmuCI GTSAC 2 cut(s) 638, 991
NspI RCATGY 1 cut(s) 491
OliI CACNNNNGTG 1 cut(s) 1143
PagI TCATGA 1 cut(s) 519
PciSI GCTCTTC 1 cut(s) 1050
PfeI GAWTC 2 cut(s) 523, 1060
PfoI TCCNGGA 1 cut(s) 666
PkrI GCNGC 2 cut(s) 106, 757
PpuMI RGGWCCY 2 cut(s) 244, 853
Psp124BI GAGCTC 2 cut(s) 1219, 1278
Psp5II RGGWCCY 2 cut(s) 244, 853
Psp6I CCWGG 1 cut(s) 666
PspEI GGTNACC 1 cut(s) 991
PspGI CCWGG 1 cut(s) 666
PspN4I GGNNCC 5 cut(s) 246, 823, 1072, 1303, 1326
PspPI GGNCC 4 cut(s) 142, 224, 244, 853
PspPPI RGGWCCY 2 cut(s) 244, 853
PsuI RGATCY 4 cut(s) 33, 831, 901, 1070
PvuII CAGCTG 1 cut(s) 947
RsaI GTAC 5 cut(s) 407, 614, 881, 966, 1247
RsaNI GTAC 5 cut(s) 406, 613, 880, 965, 1246
RseI CAYNNNNRTG 3 cut(s) 563, 743, 1143
SacI GAGCTC 2 cut(s) 1219, 1278
SapI GCTCTTC 1 cut(s) 1050
SaqAI TTAA 3 cut(s) 303, 591, 603
SatI GCNGC 2 cut(s) 105, 756
Sau96I GGNCC 4 cut(s) 142, 224, 244, 853
ScrFI CCNGG 1 cut(s) 668
SduI GDGCHC 4 cut(s) 1219, 1278, 1320, 1329
SfaNI GCATC 3 cut(s) 131, 613, 767
SfcI CTRYAG 1 cut(s) 1222
SinI GGWCC 2 cut(s) 244, 853
SmiMI CAYNNNNRTG 3 cut(s) 563, 743, 1143
SmlI CTYRAG 5 cut(s) 146, 590, 695, 848, 1052
SmoI CTYRAG 5 cut(s) 146, 590, 695, 848, 1052
Sse9I AATT 6 cut(s) 396, 689, 894, 969, 1065, 1263
SsiI CCGC 2 cut(s) 105, 1141
SspMI CTAG 2 cut(s) 27, 384
SstI GAGCTC 2 cut(s) 1219, 1278
StyD4I CCNGG 1 cut(s) 666
StyI CCWWGG 1 cut(s) 372
TaaI ACNGT 6 cut(s) 61, 81, 301, 479, 617, 821
TaiI ACGT 1 cut(s) 753
TaqI TCGA 5 cut(s) 39, 63, 69, 191, 291
TasI AATT 6 cut(s) 396, 689, 894, 969, 1065, 1263
TatI WGTACW 3 cut(s) 405, 964, 1245
TauI GCSGC 1 cut(s) 107
TfiI GAWTC 2 cut(s) 523, 1060
Tru1I TTAA 3 cut(s) 303, 591, 603
Tru9I TTAA 3 cut(s) 303, 591, 603
TscAI CASTG 2 cut(s) 1150, 1296
TseFI GTSAC 2 cut(s) 638, 991
TseI GCWGC 1 cut(s) 755
Tsp45I GTSAC 2 cut(s) 638, 991
TspDTI ATGAA 4 cut(s) 265, 508, 575, 1156
TspGWI ACGGA 3 cut(s) 1063, 1171, 1301
TspRI CASTG 2 cut(s) 1150, 1296
Vha464I CTTAAG 1 cut(s) 590
VpaK11BI GGWCC 2 cut(s) 244, 853
XagI CCTNNNNNAGG 1 cut(s) 179
XapI RAATTY 1 cut(s) 396
XceI RCATGY 1 cut(s) 491
XspI CTAG 2 cut(s) 27, 384
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.