Rorug03G0121600

phosphopyruvate hydratase activity

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Reverse (-)
9832597 .. 9834861
2265 bp
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UTR
Exon/CDS
Intron
Rorug03G0121600.1

Sequence Viewer

Length: 240 bp
ATGTGCGACGAGTGTGCCATGGATGACTGTATCGTAAATTTGATGTGCGGCTGTATCATAGAATACGTTGCTCGTGCCATATGGGGACTTATTGTGAACTGCGTTTGGCTCGCTGCTGCAGCGTGTGCTATGTATTTGTGCATTGTGTATCTTCAGCGTTTGGCTGGCTGCTGCTGCGGTAGCTGCGGCAGCTGCGGCGGCCTCATCAATGATAGACCATATAGCGGACAATTTTCCTGA

Protein Analysis

79

Amino Acids

8.46

Weight (kDa)

4.23

Isoelectric Point (pI)

41.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 6 cut(s) 48, 177, 186, 195, 198, 225
AcsI RAATTY 1 cut(s) 37
AcuI CTGAAG 1 cut(s) 137
AfiI CCNNNNNNNGG 1 cut(s) 224
AluBI AGCT 2 cut(s) 183, 192
AluI AGCT 2 cut(s) 183, 192
AoxI GGCC 1 cut(s) 199
ApeKI GCWGC 9 cut(s) 113, 116, 119, 168, 171, 174, 183, 189, 192
ApoI RAATTY 1 cut(s) 37
BauI CACGAG 1 cut(s) 72
BbvI GCAGC 9 cut(s) 100, 103, 131, 155, 158, 161, 170, 179, 201
BcgI CGANNNNNNTGC 1 cut(s) 30
BfmI CTRYAG 1 cut(s) 117
BsaJI CCNNGG 1 cut(s) 18
Bsc4I CCNNNNNNNGG 1 cut(s) 224
BseDI CCNNGG 1 cut(s) 18
BseGI GGATG 1 cut(s) 28
BseLI CCNNNNNNNGG 1 cut(s) 224
BseXI GCAGC 9 cut(s) 100, 103, 131, 155, 158, 161, 170, 179, 201
BshFI GGCC 1 cut(s) 201
BslFI GGGAC 1 cut(s) 99
BslI CCNNNNNNNGG 1 cut(s) 224
BsmFI GGGAC 1 cut(s) 99
BsnI GGCC 1 cut(s) 201
Bsp19I CCATGG 1 cut(s) 18
BspACI CCGC 6 cut(s) 48, 177, 186, 195, 198, 225
BspANI GGCC 1 cut(s) 201
BspMAI CTGCAG 1 cut(s) 121
BssECI CCNNGG 1 cut(s) 18
BssSI CACGAG 1 cut(s) 72
BssT1I CCWWGG 1 cut(s) 18
Bst2BI CACGAG 1 cut(s) 72
Bst4CI ACNGT 1 cut(s) 29
BstAPI GCANNNNNTGC 1 cut(s) 125
BstC8I GCNNGC 2 cut(s) 111, 166
BstDSI CCRYGG 1 cut(s) 18
BstF5I GGATG 1 cut(s) 28
BstMWI GCNNNNNNNGC 9 cut(s) 119, 125, 174, 180, 183, 189, 192, 195, 198
BstSFI CTRYAG 1 cut(s) 117
BstV1I GCAGC 9 cut(s) 100, 103, 131, 155, 158, 161, 170, 179, 201
BsuRI GGCC 1 cut(s) 201
BtgI CCRYGG 1 cut(s) 18
BtsCI GGATG 1 cut(s) 28
Cac8I GCNNGC 2 cut(s) 111, 166
CviAII CATG 1 cut(s) 19
CviJI RGCY 7 cut(s) 51, 109, 164, 168, 183, 192, 201
CviKI_1 RGCY 7 cut(s) 51, 109, 164, 168, 183, 192, 201
Eco130I CCWWGG 1 cut(s) 18
Eco57I CTGAAG 1 cut(s) 137
EcoT14I CCWWGG 1 cut(s) 18
ErhI CCWWGG 1 cut(s) 18
FaeI CATG 1 cut(s) 22
FaiI YATR 7 cut(s) 20, 59, 80, 82, 131, 220, 222
FaqI GGGAC 1 cut(s) 99
FatI CATG 1 cut(s) 18
FauNDI CATATG 1 cut(s) 80
FokI GGATG 1 cut(s) 35
HaeIII GGCC 1 cut(s) 201
Hin1II CATG 1 cut(s) 22
Hpy166II GTNNAC 1 cut(s) 97
Hpy188III TCNNGA 1 cut(s) 237
Hpy8I GTNNAC 1 cut(s) 97
Hpy99I CGWCG 1 cut(s) 11
HpyCH4III ACNGT 1 cut(s) 29
HpyCH4IV ACGT 1 cut(s) 66
HpyCH4V TGCA 2 cut(s) 119, 141
HpyF10VI GCNNNNNNNGC 9 cut(s) 119, 125, 174, 180, 183, 189, 192, 195, 198
HpySE526I ACGT 1 cut(s) 66
Hsp92II CATG 1 cut(s) 22
LpnPI CCDG 1 cut(s) 150
Lsp1109I GCAGC 9 cut(s) 100, 103, 131, 155, 158, 161, 170, 179, 201
MaeII ACGT 1 cut(s) 66
MboII GAAGA 1 cut(s) 143
MluCI AATT 2 cut(s) 37, 230
MnlI CCTC 1 cut(s) 212
MspA1I CMGCKG 1 cut(s) 192
MwoI GCNNNNNNNGC 9 cut(s) 119, 125, 174, 180, 183, 189, 192, 195, 198
NcoI CCATGG 1 cut(s) 18
NdeI CATATG 1 cut(s) 80
NlaIII CATG 1 cut(s) 22
PstI CTGCAG 1 cut(s) 121
PvuII CAGCTG 1 cut(s) 192
SetI ASST 3 cut(s) 69, 185, 194
SfcI CTRYAG 1 cut(s) 117
SgeI CNNG 7 cut(s) 22, 31, 84, 86, 122, 135, 177
Sse9I AATT 2 cut(s) 37, 230
SsiI CCGC 6 cut(s) 48, 177, 186, 195, 198, 225
StyI CCWWGG 1 cut(s) 18
TaaI ACNGT 1 cut(s) 29
TaiI ACGT 1 cut(s) 69
TasI AATT 2 cut(s) 37, 230
TauI GCSGC 4 cut(s) 51, 189, 198, 201
TseI GCWGC 9 cut(s) 113, 116, 119, 168, 171, 174, 183, 189, 192
XapI RAATTY 1 cut(s) 37
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.