Rmu_sc0000090.1_g000028

phosphopyruvate hydratase activity

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000090.1
Physical Location & Seq
Forward (+)
92991 .. 96635
3645 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000090.1_g000028.1.cds

Sequence Viewer

Length: 1284 bp
atggctacgatccagtcagttaaggcgaggcagatcttcgacagccgtggcaatcccaccgtcgaggtcgatatagtactttcagatggttttttggctagagctgctgttcccagtggtgcctctaccggtgtgtacgaggctcttgagctgcgtgatggaggcaaagagtaccttggaaagggtgtgtcgaaggctgtcaacaatgtcaactcaatcatcggccctgctttgatcggcaaggacccatgtgaccagactgccattgataactttatggttcagcagctcgatggaactgttaatgagtggggttggtgcaaacaaaagcttggtgcaaatgccatattggccgtgtctcttgcagtctgcaaagctggggctagtgttaagaaaattcctctttacaagcacattgccaatcttgctggcaacaagaacttggtgttacctgttcctgctttcaatgtcatcaatggaggatcacatgcaggaaacaaacttgccatgcaggagttcatgattcttcctgttggagcttcctcattcaaagaggccatgaagatgggtgtggaagtatatcataatctaaagtctgtgattaaaaagaaatacggtcaggatgcaaccaacgtcggtgacgaaggtggatttgctcccaacattcaggagaacaaggaaggtcttgaattgctgaagactgccattgagaaggctggatacactggaaaggttgtcattggaatggatgttgctgcatctgagttttatggaacagataaaacctatgacctgaacttcaaggaagagaaaaatgatggttcccagaagatttccggaaatgctctcaaggatctctacaagtcatttgcgtccgagtaccctattgtctcaattgaagatccctttgaccaagatgattgggagcactactccaagatgacagctgaatgtggagagcaagtacaaatcgtcggagatgatctattggtcaccaaccccaaggtgaatcaaattgggtccgtaactgagagtattgaggccgtaagaatgtctaagaaagctgggtggggtgtcatggccagccacagaagcggagaaactgaggacacattcattgctgatctttctgtcggtttggccacgggtcaaatcaagaccggtgctccctgcaggtcagagcgtcttgccaagtataaccagctcttgcgtattgaggaggaacttggttcagcagcagtctatgccggagcaaagttccgtgtgccagtcgaaccctattag

Protein Analysis

427

Amino Acids

45.92

Weight (kDa)

5.5

Isoelectric Point (pI)

35.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1164
AccB1I GGYRCC 1 cut(s) 119
AccIII TCCGGA 1 cut(s) 836
AciI CCGC 1 cut(s) 1095
AclWI GGATC 4 cut(s) 4, 490, 861, 896
AcoI YGGCCR 3 cut(s) 351, 1080, 1140
AcsI RAATTY 1 cut(s) 396
AcuI CTGAAG 1 cut(s) 716
AfaI GTAC 5 cut(s) 78, 137, 173, 881, 966
AfiI CCNNNNNNNGG 1 cut(s) 181
AgeI ACCGGT 2 cut(s) 128, 1160
AgsI TTSAA 5 cut(s) 466, 550, 689, 802, 899
AluBI AGCT 9 cut(s) 104, 151, 289, 331, 377, 539, 947, 1064, 1204
AluI AGCT 9 cut(s) 104, 151, 289, 331, 377, 539, 947, 1064, 1204
Alw21I GWGCWC 2 cut(s) 930, 1168
Alw26I GTCTC 2 cut(s) 363, 895
AlwI GGATC 4 cut(s) 4, 490, 861, 896
Aor13HI TCCGGA 1 cut(s) 836
AoxI GGCC 6 cut(s) 223, 351, 555, 1041, 1080, 1140
ApeKI GCWGC 5 cut(s) 104, 151, 286, 755, 1235
ApoI RAATTY 1 cut(s) 396
AsiGI ACCGGT 2 cut(s) 128, 1160
AspS9I GGNCC 3 cut(s) 224, 244, 1020
AsuHPI GGTGA 3 cut(s) 650, 985, 1018
AvaII GGWCC 2 cut(s) 244, 1020
BalI TGGCCA 2 cut(s) 1082, 1142
BanI GGYRCC 1 cut(s) 119
BarI GAAGNNNNNNTAC 2 cut(s) 704, 736
BbsI GAAGAC 1 cut(s) 704
Bbv12I GWGCWC 2 cut(s) 930, 1168
BbvI GCAGC 5 cut(s) 91, 138, 298, 742, 1247
BccI CCATC 5 cut(s) 80, 152, 287, 559, 812
BceAI ACGGC 3 cut(s) 30, 338, 1028
BciVI GTATCC 1 cut(s) 713
BcoDI GTCTC 2 cut(s) 363, 895
BfaI CTAG 2 cut(s) 99, 384
BfmI CTRYAG 1 cut(s) 1171
BfuAI ACCTGC 1 cut(s) 1164
BfuI GTATCC 1 cut(s) 713
BglI GCCNNNNNGGC 1 cut(s) 350
BglII AGATCT 1 cut(s) 33
BisI GCNGC 5 cut(s) 105, 152, 287, 756, 1236
BlsI GCNGC 5 cut(s) 106, 153, 288, 757, 1237
BmcAI AGTACT 1 cut(s) 78
Bme18I GGWCC 2 cut(s) 244, 1020
BmgT120I GGNCC 3 cut(s) 224, 244, 1020
BmiI GGNNCC 4 cut(s) 121, 246, 823, 1021
BmrI ACTGGG 1 cut(s) 108
BmsI GCATC 2 cut(s) 613, 767
BmuI ACTGGG 1 cut(s) 108
BpiI GAAGAC 1 cut(s) 704
BplI GAGNNNNNCTC 2 cut(s) 917, 949
BpuEI CTTGAG 2 cut(s) 167, 833
BsaJI CCNNGG 4 cut(s) 46, 175, 1002, 1143
BsaWI WCCGGW 3 cut(s) 128, 836, 1160
BsaXI ACNNNNNCTCC 4 cut(s) 948, 978, 1150, 1180
Bsc4I CCNNNNNNNGG 1 cut(s) 181
Bse118I RCCGGY 2 cut(s) 128, 1160
Bse1I ACTGG 4 cut(s) 13, 114, 730, 1268
Bse3DI GCAATG 2 cut(s) 414, 1116
BseAI TCCGGA 1 cut(s) 836
BseDI CCNNGG 4 cut(s) 46, 175, 1002, 1143
BseGI GGATG 2 cut(s) 628, 754
BseLI CCNNNNNNNGG 1 cut(s) 181
BseMI GCAATG 2 cut(s) 414, 1116
BseMII CTCAG 3 cut(s) 753, 1020, 1095
BseNI ACTGG 4 cut(s) 13, 114, 730, 1268
BseRI GAGGAG 1 cut(s) 1232
BseXI GCAGC 5 cut(s) 91, 138, 298, 742, 1247
BseYI CCCAGC 2 cut(s) 377, 1064
BshFI GGCC 6 cut(s) 225, 353, 557, 1043, 1082, 1142
BshNI GGYRCC 1 cut(s) 119
BshTI ACCGGT 2 cut(s) 128, 1160
BsiHKAI GWGCWC 2 cut(s) 930, 1168
BsiSI CCGG 4 cut(s) 129, 837, 1161, 1248
BslI CCNNNNNNNGG 1 cut(s) 181
BsmAI GTCTC 2 cut(s) 363, 895
BsnI GGCC 6 cut(s) 225, 353, 557, 1043, 1082, 1142
Bsp1286I GDGCHC 2 cut(s) 930, 1168
Bsp13I TCCGGA 1 cut(s) 836
Bsp143I GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1123
BspACI CCGC 1 cut(s) 1095
BspANI GGCC 6 cut(s) 225, 353, 557, 1043, 1082, 1142
BspCNI CTCAG 3 cut(s) 754, 1021, 1096
BspEI TCCGGA 1 cut(s) 836
BspHI TCATGA 1 cut(s) 519
BspLI GGNNCC 4 cut(s) 121, 246, 823, 1021
BspMAI CTGCAG 1 cut(s) 1175
BspMI ACCTGC 1 cut(s) 1164
BspPI GGATC 4 cut(s) 4, 490, 861, 896
BspT107I GGYRCC 1 cut(s) 119
BsrDI GCAATG 2 cut(s) 414, 1116
BsrFI RCCGGY 2 cut(s) 128, 1160
BsrI ACTGG 4 cut(s) 13, 114, 730, 1268
BssAI RCCGGY 2 cut(s) 128, 1160
BssECI CCNNGG 4 cut(s) 46, 175, 1002, 1143
BssMI GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1123
BssT1I CCWWGG 2 cut(s) 175, 1002
Bst4CI ACNGT 3 cut(s) 61, 301, 617
Bst6I CTCTTC 1 cut(s) 801
BstAPI GCANNNNNTGC 1 cut(s) 1244
BstC8I GCNNGC 2 cut(s) 430, 1084
BstDEI CTNAG 4 cut(s) 762, 1029, 1056, 1104
BstDSI CCRYGG 2 cut(s) 46, 1143
BstEII GGTNACC 1 cut(s) 991
BstENI CCTNNNNNAGG 1 cut(s) 179
BstF5I GGATG 2 cut(s) 628, 754
BstKTI GATC 8 cut(s) 12, 36, 237, 485, 856, 904, 985, 1126
BstMAI GTCTC 2 cut(s) 363, 895
BstMBI GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1123
BstMWI GCNNNNNNNGC 5 cut(s) 104, 350, 425, 1092, 1244
BstNSI RCATGY 1 cut(s) 491
BstPI GGTNACC 1 cut(s) 991
BstSFI CTRYAG 1 cut(s) 1171
BstV1I GCAGC 5 cut(s) 91, 138, 298, 742, 1247
BstV2I GAAGAC 1 cut(s) 704
BstX2I RGATCY 3 cut(s) 33, 853, 901
BstXI CCANNNNNNTGG 1 cut(s) 565
BstYI RGATCY 3 cut(s) 33, 853, 901
BsuI GTATCC 1 cut(s) 713
BsuRI GGCC 6 cut(s) 225, 353, 557, 1043, 1082, 1142
BtgI CCRYGG 2 cut(s) 46, 1143
BtsCI GGATG 2 cut(s) 628, 754
BtsIMutI CAGTG 2 cut(s) 121, 723
BveI ACCTGC 1 cut(s) 1164
Cac8I GCNNGC 2 cut(s) 430, 1084
CciI TCATGA 1 cut(s) 519
Cfr10I RCCGGY 2 cut(s) 128, 1160
Cfr13I GGNCC 3 cut(s) 224, 244, 1020
CseI GACGC 2 cut(s) 861, 1172
Csp6I GTAC 5 cut(s) 77, 136, 172, 880, 965
CspAI ACCGGT 2 cut(s) 128, 1160
CviAII CATG 6 cut(s) 249, 488, 508, 520, 559, 1078
CviQI GTAC 5 cut(s) 77, 136, 172, 880, 965
DdeI CTNAG 4 cut(s) 762, 1029, 1056, 1104
DpnI GATC 8 cut(s) 11, 35, 236, 484, 855, 903, 984, 1125
DpnII GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1123
EaeI YGGCCR 3 cut(s) 351, 1080, 1140
Eam1104I CTCTTC 1 cut(s) 801
EarI CTCTTC 1 cut(s) 801
Eco130I CCWWGG 2 cut(s) 175, 1002
Eco47I GGWCC 2 cut(s) 244, 1020
Eco57I CTGAAG 1 cut(s) 716
Eco91I GGTNACC 1 cut(s) 991
EcoNI CCTNNNNNAGG 1 cut(s) 179
EcoO109I RGGNCCY 1 cut(s) 244
EcoO65I GGTNACC 1 cut(s) 991
EcoT14I CCWWGG 2 cut(s) 175, 1002
ErhI CCWWGG 2 cut(s) 175, 1002
FaeI CATG 6 cut(s) 252, 491, 511, 523, 562, 1081
FalI AAGNNNNNCTT 2 cut(s) 159, 191
FatI CATG 6 cut(s) 248, 487, 507, 519, 558, 1077
Fnu4HI GCNGC 5 cut(s) 105, 152, 287, 756, 1236
FokI GGATG 2 cut(s) 635, 761
Fsp4HI GCNGC 5 cut(s) 105, 152, 287, 756, 1236
FspBI CTAG 2 cut(s) 99, 384
GluI GCNGC 5 cut(s) 105, 152, 287, 756, 1236
GsaI CCCAGC 2 cut(s) 381, 1068
HaeIII GGCC 6 cut(s) 225, 353, 557, 1043, 1082, 1142
HapII CCGG 4 cut(s) 129, 837, 1161, 1248
HgaI GACGC 2 cut(s) 861, 1172
Hin1II CATG 6 cut(s) 252, 491, 511, 523, 562, 1081
HincII GTYRAC 2 cut(s) 202, 211
HindII GTYRAC 2 cut(s) 202, 211
HindIII AAGCTT 1 cut(s) 329
HinfI GANTC 2 cut(s) 523, 1009
HpaII CCGG 4 cut(s) 129, 837, 1161, 1248
HphI GGTGA 3 cut(s) 650, 985, 1018
Hpy166II GTNNAC 3 cut(s) 136, 202, 211
Hpy188I TCNGA 5 cut(s) 85, 763, 877, 977, 1180
Hpy188III TCNNGA 7 cut(s) 146, 520, 620, 668, 686, 837, 1156
Hpy8I GTNNAC 3 cut(s) 136, 202, 211
Hpy99I CGWCG 3 cut(s) 65, 638, 977
HpyAV CCTTC 4 cut(s) 187, 638, 674, 706
HpyCH4III ACNGT 3 cut(s) 61, 301, 617
HpyCH4IV ACGT 1 cut(s) 633
HpyCH4V TGCA 9 cut(s) 321, 338, 365, 372, 491, 511, 626, 758, 1173
HpyF10VI GCNNNNNNNGC 5 cut(s) 104, 350, 425, 1092, 1244
HpyF3I CTNAG 4 cut(s) 762, 1029, 1056, 1104
HpySE526I ACGT 1 cut(s) 633
Hsp92II CATG 6 cut(s) 252, 491, 511, 523, 562, 1081
Kpn2I TCCGGA 1 cut(s) 836
Kzo9I GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1123
LmnI GCTCC 5 cut(s) 536, 661, 925, 1171, 1250
Lsp1109I GCAGC 5 cut(s) 91, 138, 298, 742, 1247
LweI GCATC 2 cut(s) 613, 767
MaeI CTAG 2 cut(s) 99, 384
MaeII ACGT 1 cut(s) 633
MaeIII GTNAC 5 cut(s) 251, 447, 638, 991, 1024
MalI GATC 8 cut(s) 11, 35, 236, 484, 855, 903, 984, 1125
MboI GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1123
MboII GAAGA 7 cut(s) 28, 518, 574, 709, 818, 841, 911
MfeI CAATTG 1 cut(s) 894
MflI RGATCY 3 cut(s) 33, 853, 901
MhlI GDGCHC 2 cut(s) 930, 1168
MlsI TGGCCA 2 cut(s) 1082, 1142
MluCI AATT 4 cut(s) 396, 689, 894, 1014
MluNI TGGCCA 2 cut(s) 1082, 1142
MmeI TCCRAC 2 cut(s) 514, 955
Mox20I TGGCCA 2 cut(s) 1082, 1142
MroI TCCGGA 1 cut(s) 836
MscI TGGCCA 2 cut(s) 1082, 1142
MseI TTAA 4 cut(s) 21, 303, 390, 603
MslI CAYNNNNRTG 2 cut(s) 563, 743
Msp20I TGGCCA 2 cut(s) 1082, 1142
MspA1I CMGCKG 1 cut(s) 947
MspI CCGG 4 cut(s) 129, 837, 1161, 1248
MunI CAATTG 1 cut(s) 894
MwoI GCNNNNNNNGC 5 cut(s) 104, 350, 425, 1092, 1244
NdeII GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1123
NlaIII CATG 6 cut(s) 252, 491, 511, 523, 562, 1081
NlaIV GGNNCC 4 cut(s) 121, 246, 823, 1021
NmuCI GTSAC 3 cut(s) 251, 638, 991
NspI RCATGY 1 cut(s) 491
PagI TCATGA 1 cut(s) 519
PcsI WCGNNNNNNNCGW 1 cut(s) 639
PfeI GAWTC 2 cut(s) 523, 1009
PinAI ACCGGT 2 cut(s) 128, 1160
PkrI GCNGC 5 cut(s) 106, 153, 288, 757, 1237
PpuMI RGGWCCY 1 cut(s) 244
Psp5II RGGWCCY 1 cut(s) 244
PspEI GGTNACC 1 cut(s) 991
PspFI CCCAGC 2 cut(s) 377, 1064
PspN4I GGNNCC 4 cut(s) 121, 246, 823, 1021
PspPI GGNCC 3 cut(s) 224, 244, 1020
PspPPI RGGWCCY 1 cut(s) 244
PstI CTGCAG 1 cut(s) 1175
PsuI RGATCY 3 cut(s) 33, 853, 901
PvuII CAGCTG 1 cut(s) 947
RsaI GTAC 5 cut(s) 78, 137, 173, 881, 966
RsaNI GTAC 5 cut(s) 77, 136, 172, 880, 965
RseI CAYNNNNRTG 2 cut(s) 563, 743
SaqAI TTAA 4 cut(s) 21, 303, 390, 603
SatI GCNGC 5 cut(s) 105, 152, 287, 756, 1236
Sau3AI GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1123
Sau96I GGNCC 3 cut(s) 224, 244, 1020
SbfI CCTGCAGG 1 cut(s) 1175
ScaI AGTACT 1 cut(s) 78
SdaI CCTGCAGG 1 cut(s) 1175
SduI GDGCHC 2 cut(s) 930, 1168
SfaNI GCATC 2 cut(s) 613, 767
SfcI CTRYAG 1 cut(s) 1171
SinI GGWCC 2 cut(s) 244, 1020
SmiMI CAYNNNNRTG 2 cut(s) 563, 743
SmlI CTYRAG 2 cut(s) 146, 848
SmoI CTYRAG 2 cut(s) 146, 848
Sse8387I CCTGCAGG 1 cut(s) 1175
Sse9I AATT 4 cut(s) 396, 689, 894, 1014
SsiI CCGC 1 cut(s) 1095
SspMI CTAG 2 cut(s) 99, 384
StyI CCWWGG 2 cut(s) 175, 1002
TaaI ACNGT 3 cut(s) 61, 301, 617
TaiI ACGT 1 cut(s) 636
TaqI TCGA 6 cut(s) 39, 63, 69, 191, 291, 1272
TasI AATT 4 cut(s) 396, 689, 894, 1014
TatI WGTACW 2 cut(s) 76, 964
TfiI GAWTC 2 cut(s) 523, 1009
Tru1I TTAA 4 cut(s) 21, 303, 390, 603
Tru9I TTAA 4 cut(s) 21, 303, 390, 603
TscAI CASTG 2 cut(s) 121, 730
TseFI GTSAC 3 cut(s) 251, 638, 991
TseI GCWGC 5 cut(s) 104, 151, 286, 755, 1235
Tsp45I GTSAC 3 cut(s) 251, 638, 991
TspDTI ATGAA 3 cut(s) 508, 575, 1105
TspGWI ACGGA 2 cut(s) 1012, 1250
TspRI CASTG 2 cut(s) 121, 730
VpaK11BI GGWCC 2 cut(s) 244, 1020
XagI CCTNNNNNAGG 1 cut(s) 179
XapI RAATTY 1 cut(s) 396
XceI RCATGY 1 cut(s) 491
XspI CTAG 2 cut(s) 99, 384
ZrmI AGTACT 1 cut(s) 78
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.