Rh3AG173200

phosphopyruvate hydratase activity

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Forward (+)
16057960 .. 16061716
3757 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG173200.1

Sequence Viewer

Length: 1335 bp
ATGGCTACGATCCAGTCAGTTAAGGCGAGGCAGATCTTCGACAGCCGTGGCAATCCCACCGTCGAGGTCGATATAGTACTTTCAGATGGTTTTTTGGCTAGAGCTGCTGTTCCCAGTGGTGCCTCTACCGGTGTGTACGAGGCTCTTGAGCTGCGTGATGGAGGCAAAGAGTACCTTGGAAAGGGTGTGTCGAAGGCTGTCAACAATGTCAACTCAATCATCGGCCCCGCTTTGATCGGCAAGGACCCATCTGAGCAGACTGCCATTGATAACTTTATGGTTCAGCAGCTCGATGGAACTGTTAATGAGTGGGGTTGGTGCAAACAAAAGCTTGGTGCAAATGCCATATTGGCCGTGTCTCTTGCAGTCTGCAAAGCTGGGGCTAGTGTTAAGAAAATTCCTCTTTACAAGCACATTGCCAATCTTGCTGGCAACAAGAACTTGGTGTTACCTGTTCCTGCTTTCAATGTCATCAATGGAGGATCACATGCAGGAAACAAACTTGCCATGCAGGAGTTCATGATTCTTCCTGTTGGAGCTTCCTCATTCAAAGAGGCCATGAAGATGGGTGTGGAAGTATATCATAATCTAAAGTCTGTGATTAAAAAGAAATATGGTCAGGATGCAACCAATGTCGGTGACGAAGGTGGATTTGCTCCCAACATTCAGGAGAACAAGGAAGGTCTTGAATTGCTTAAGACTGCCATTGAGAAGGCTGGTTACACTGGAAAGGTTGTCATTGGAATGGATGTTGCTGCATCCGAGTTTTATGGAACAGATAAAACCTATGACTTGAACTTCAAGGAAGAGAAAAATGATGGTTCCTCGAAGATTTCCGGAAATGCTCTCAAGGATCTCTACAAGTCATTTGCGTCCGAGTACCCTATTGTCTCAATTGAAGATCCCTTTGACCAAGATGATTGGGAGCACTACTCCAAGATGACAGCTGAATGTGGAGAGCAAGTACAAATTGTTGGAGATGATCTATTGGTCACCAACCCCAAGAGGGTTGAGAAAGCAATCAAGGAGAAAAGTTGCAATGCTCTTCTTCTGAAGGTGAATCAAATCGGGTCCGTAACTGAGAGTATTGAGGCCGTAAGAATGTCTAAGAAAGCTGGGTGGGGTGTCATGGCTAGCCACAGAAGTGGAGAAACTGAGGACACTTTCATTGCTGATCTTTCTGTCGGTTTGGCCACGGGTCAAATCAAGACTGGTGCTCCCTGCAGGTCAGAGCGTCTTGCCAAGTATAACCAGCTCTTGCGTATTGAGGAGGAACTTGGTTCAGCAGCAGTCTATGCTGGAGCAAAGTTCCGTGTGCCAGTCGAACCCTATTAG

Protein Analysis

444

Amino Acids

47.8

Weight (kDa)

5.91

Isoelectric Point (pI)

36.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Enolase_N PF03952 4 - 139 4e-53 Enolase, N-terminal domain
Enolase_C PF00113 148 - 438 3.6e-158 Enolase, C-terminal TIM barrel domain
MR_MLE_C PF13378 289 - 405 8e-08 Enolase C-terminal domain-like
MAAL_C PF07476 297 - 401 4.8e-06 Methylaspartate ammonia-lyase C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1215
AccB1I GGYRCC 1 cut(s) 119
AccIII TCCGGA 1 cut(s) 836
AciI CCGC 1 cut(s) 228
AclWI GGATC 4 cut(s) 4, 490, 861, 896
AcoI YGGCCR 2 cut(s) 351, 1191
AcsI RAATTY 1 cut(s) 396
AcuI CTGAAG 1 cut(s) 1073
AfaI GTAC 5 cut(s) 78, 137, 173, 881, 966
AfiI CCNNNNNNNGG 2 cut(s) 181, 1006
AflII CTTAAG 1 cut(s) 695
AgeI ACCGGT 1 cut(s) 128
AgsI TTSAA 6 cut(s) 466, 550, 689, 796, 802, 899
AleI CACNNNNGTG 1 cut(s) 1143
AluBI AGCT 9 cut(s) 104, 151, 289, 331, 377, 539, 947, 1115, 1255
AluI AGCT 9 cut(s) 104, 151, 289, 331, 377, 539, 947, 1115, 1255
Alw21I GWGCWC 2 cut(s) 930, 1219
Alw26I GTCTC 2 cut(s) 363, 895
AlwI GGATC 4 cut(s) 4, 490, 861, 896
Aor13HI TCCGGA 1 cut(s) 836
AoxI GGCC 5 cut(s) 223, 351, 555, 1092, 1191
ApeKI GCWGC 5 cut(s) 104, 151, 286, 755, 1286
ApoI RAATTY 1 cut(s) 396
AsiGI ACCGGT 1 cut(s) 128
AspS9I GGNCC 3 cut(s) 224, 244, 1071
AsuHPI GGTGA 3 cut(s) 650, 985, 1069
AsuNHI GCTAGC 1 cut(s) 1133
AvaII GGWCC 2 cut(s) 244, 1071
BalI TGGCCA 1 cut(s) 1193
BanI GGYRCC 1 cut(s) 119
BarI GAAGNNNNNNTAC 2 cut(s) 704, 736
Bbv12I GWGCWC 2 cut(s) 930, 1219
BbvI GCAGC 5 cut(s) 91, 138, 298, 742, 1298
BccI CCATC 6 cut(s) 80, 152, 256, 287, 559, 812
BceAI ACGGC 3 cut(s) 30, 338, 1079
BcoDI GTCTC 2 cut(s) 363, 895
BfaI CTAG 3 cut(s) 99, 384, 1134
BfmI CTRYAG 1 cut(s) 1222
BfrI CTTAAG 1 cut(s) 695
BfuAI ACCTGC 1 cut(s) 1215
BglI GCCNNNNNGGC 1 cut(s) 350
BglII AGATCT 1 cut(s) 33
BisI GCNGC 5 cut(s) 105, 152, 287, 756, 1287
BlsI GCNGC 5 cut(s) 106, 153, 288, 757, 1288
BmcAI AGTACT 1 cut(s) 78
Bme18I GGWCC 2 cut(s) 244, 1071
BmgT120I GGNCC 3 cut(s) 224, 244, 1071
BmiI GGNNCC 5 cut(s) 121, 226, 246, 823, 1072
BmrI ACTGGG 1 cut(s) 108
BmsI GCATC 2 cut(s) 613, 767
BmtI GCTAGC 1 cut(s) 1137
BmuI ACTGGG 1 cut(s) 108
BplI GAGNNNNNCTC 2 cut(s) 917, 949
BpmI CTGGAG 1 cut(s) 1320
BpuEI CTTGAG 2 cut(s) 167, 833
BsaJI CCNNGG 3 cut(s) 46, 175, 1194
BsaWI WCCGGW 2 cut(s) 128, 836
BsaXI ACNNNNNCTCC 4 cut(s) 948, 978, 1201, 1231
Bsc4I CCNNNNNNNGG 2 cut(s) 181, 1006
Bse118I RCCGGY 1 cut(s) 128
Bse1I ACTGG 5 cut(s) 13, 114, 730, 1216, 1319
Bse3DI GCAATG 3 cut(s) 414, 1045, 1167
BseAI TCCGGA 1 cut(s) 836
BseDI CCNNGG 3 cut(s) 46, 175, 1194
BseGI GGATG 3 cut(s) 628, 754, 758
BseLI CCNNNNNNNGG 2 cut(s) 181, 1006
BseMI GCAATG 3 cut(s) 414, 1045, 1167
BseMII CTCAG 3 cut(s) 243, 1071, 1146
BseNI ACTGG 5 cut(s) 13, 114, 730, 1216, 1319
BseRI GAGGAG 1 cut(s) 1283
BseXI GCAGC 5 cut(s) 91, 138, 298, 742, 1298
BseYI CCCAGC 2 cut(s) 377, 1115
BshFI GGCC 5 cut(s) 225, 353, 557, 1094, 1193
BshNI GGYRCC 1 cut(s) 119
BshTI ACCGGT 1 cut(s) 128
BsiHKAI GWGCWC 2 cut(s) 930, 1219
BsiSI CCGG 2 cut(s) 129, 837
BslI CCNNNNNNNGG 2 cut(s) 181, 1006
BsmAI GTCTC 2 cut(s) 363, 895
BsnI GGCC 5 cut(s) 225, 353, 557, 1094, 1193
Bsp1286I GDGCHC 2 cut(s) 930, 1219
Bsp13I TCCGGA 1 cut(s) 836
Bsp143I GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1174
BspACI CCGC 1 cut(s) 228
BspANI GGCC 5 cut(s) 225, 353, 557, 1094, 1193
BspCNI CTCAG 3 cut(s) 244, 1072, 1147
BspEI TCCGGA 1 cut(s) 836
BspHI TCATGA 1 cut(s) 519
BspLI GGNNCC 5 cut(s) 121, 226, 246, 823, 1072
BspMAI CTGCAG 1 cut(s) 1226
BspMI ACCTGC 1 cut(s) 1215
BspOI GCTAGC 1 cut(s) 1137
BspPI GGATC 4 cut(s) 4, 490, 861, 896
BspQI GCTCTTC 1 cut(s) 1050
BspT107I GGYRCC 1 cut(s) 119
BspTI CTTAAG 1 cut(s) 695
BsrDI GCAATG 3 cut(s) 414, 1045, 1167
BsrFI RCCGGY 1 cut(s) 128
BsrI ACTGG 5 cut(s) 13, 114, 730, 1216, 1319
BssAI RCCGGY 1 cut(s) 128
BssECI CCNNGG 3 cut(s) 46, 175, 1194
BssMI GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1174
BssT1I CCWWGG 1 cut(s) 175
Bst4CI ACNGT 2 cut(s) 61, 301
Bst6I CTCTTC 2 cut(s) 801, 1050
BstAFI CTTAAG 1 cut(s) 695
BstAPI GCANNNNNTGC 1 cut(s) 1295
BstC8I GCNNGC 2 cut(s) 430, 1135
BstDEI CTNAG 4 cut(s) 252, 1080, 1107, 1155
BstDSI CCRYGG 2 cut(s) 46, 1194
BstEII GGTNACC 1 cut(s) 991
BstENI CCTNNNNNAGG 1 cut(s) 179
BstF5I GGATG 3 cut(s) 628, 754, 758
BstKTI GATC 8 cut(s) 12, 36, 237, 485, 856, 904, 985, 1177
BstMAI GTCTC 2 cut(s) 363, 895
BstMBI GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1174
BstMWI GCNNNNNNNGC 4 cut(s) 104, 350, 425, 1295
BstNSI RCATGY 1 cut(s) 491
BstPI GGTNACC 1 cut(s) 991
BstSFI CTRYAG 1 cut(s) 1222
BstV1I GCAGC 5 cut(s) 91, 138, 298, 742, 1298
BstX2I RGATCY 3 cut(s) 33, 853, 901
BstXI CCANNNNNNTGG 2 cut(s) 565, 1145
BstYI RGATCY 3 cut(s) 33, 853, 901
BsuRI GGCC 5 cut(s) 225, 353, 557, 1094, 1193
BtgI CCRYGG 2 cut(s) 46, 1194
BtsCI GGATG 3 cut(s) 628, 754, 758
BtsIMutI CAGTG 2 cut(s) 121, 723
BveI ACCTGC 1 cut(s) 1215
Cac8I GCNNGC 2 cut(s) 430, 1135
CciI TCATGA 1 cut(s) 519
Cfr10I RCCGGY 1 cut(s) 128
Cfr13I GGNCC 3 cut(s) 224, 244, 1071
CseI GACGC 2 cut(s) 861, 1223
Csp6I GTAC 5 cut(s) 77, 136, 172, 880, 965
CspAI ACCGGT 1 cut(s) 128
CviAII CATG 5 cut(s) 488, 508, 520, 559, 1129
CviQI GTAC 5 cut(s) 77, 136, 172, 880, 965
DdeI CTNAG 4 cut(s) 252, 1080, 1107, 1155
DpnI GATC 8 cut(s) 11, 35, 236, 484, 855, 903, 984, 1176
DpnII GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1174
EaeI YGGCCR 2 cut(s) 351, 1191
Eam1104I CTCTTC 2 cut(s) 801, 1050
EarI CTCTTC 2 cut(s) 801, 1050
Eco130I CCWWGG 1 cut(s) 175
Eco47I GGWCC 2 cut(s) 244, 1071
Eco57I CTGAAG 1 cut(s) 1073
Eco91I GGTNACC 1 cut(s) 991
EcoNI CCTNNNNNAGG 1 cut(s) 179
EcoO109I RGGNCCY 1 cut(s) 244
EcoO65I GGTNACC 1 cut(s) 991
EcoT14I CCWWGG 1 cut(s) 175
ErhI CCWWGG 1 cut(s) 175
FaeI CATG 5 cut(s) 491, 511, 523, 562, 1132
FalI AAGNNNNNCTT 2 cut(s) 159, 191
FatI CATG 5 cut(s) 487, 507, 519, 558, 1128
FauI CCCGC 1 cut(s) 235
Fnu4HI GCNGC 5 cut(s) 105, 152, 287, 756, 1287
FokI GGATG 3 cut(s) 635, 745, 761
Fsp4HI GCNGC 5 cut(s) 105, 152, 287, 756, 1287
FspBI CTAG 3 cut(s) 99, 384, 1134
GluI GCNGC 5 cut(s) 105, 152, 287, 756, 1287
GsaI CCCAGC 2 cut(s) 381, 1119
GsuI CTGGAG 1 cut(s) 1320
HaeIII GGCC 5 cut(s) 225, 353, 557, 1094, 1193
HapII CCGG 2 cut(s) 129, 837
HgaI GACGC 2 cut(s) 861, 1223
Hin1II CATG 5 cut(s) 491, 511, 523, 562, 1132
HincII GTYRAC 2 cut(s) 202, 211
HindII GTYRAC 2 cut(s) 202, 211
HindIII AAGCTT 1 cut(s) 329
HinfI GANTC 2 cut(s) 523, 1060
HpaII CCGG 2 cut(s) 129, 837
HphI GGTGA 3 cut(s) 650, 985, 1069
Hpy166II GTNNAC 3 cut(s) 136, 202, 211
Hpy188I TCNGA 6 cut(s) 85, 253, 763, 877, 1053, 1231
Hpy188III TCNNGA 7 cut(s) 146, 520, 620, 668, 686, 837, 1207
Hpy8I GTNNAC 3 cut(s) 136, 202, 211
Hpy99I CGWCG 1 cut(s) 65
HpyAV CCTTC 5 cut(s) 187, 638, 674, 706, 1048
HpyCH4III ACNGT 2 cut(s) 61, 301
HpyF10VI GCNNNNNNNGC 4 cut(s) 104, 350, 425, 1295
HpyF3I CTNAG 4 cut(s) 252, 1080, 1107, 1155
Hsp92II CATG 5 cut(s) 491, 511, 523, 562, 1132
Kpn2I TCCGGA 1 cut(s) 836
Kzo9I GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1174
LguI GCTCTTC 1 cut(s) 1050
LmnI GCTCC 5 cut(s) 536, 661, 925, 1222, 1301
Lsp1109I GCAGC 5 cut(s) 91, 138, 298, 742, 1298
LweI GCATC 2 cut(s) 613, 767
MaeI CTAG 3 cut(s) 99, 384, 1134
MaeIII GTNAC 5 cut(s) 447, 638, 719, 991, 1075
MalI GATC 8 cut(s) 11, 35, 236, 484, 855, 903, 984, 1176
MboI GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1174
MboII GAAGA 8 cut(s) 28, 518, 574, 818, 841, 911, 1037, 1040
MfeI CAATTG 1 cut(s) 894
MflI RGATCY 3 cut(s) 33, 853, 901
MhlI GDGCHC 2 cut(s) 930, 1219
MlsI TGGCCA 1 cut(s) 1193
MluCI AATT 4 cut(s) 396, 689, 894, 969
MluNI TGGCCA 1 cut(s) 1193
MmeI TCCRAC 2 cut(s) 514, 955
Mox20I TGGCCA 1 cut(s) 1193
MroI TCCGGA 1 cut(s) 836
MscI TGGCCA 1 cut(s) 1193
MseI TTAA 5 cut(s) 21, 303, 390, 603, 696
MslI CAYNNNNRTG 3 cut(s) 563, 743, 1143
Msp20I TGGCCA 1 cut(s) 1193
MspA1I CMGCKG 1 cut(s) 947
MspCI CTTAAG 1 cut(s) 695
MspI CCGG 2 cut(s) 129, 837
MunI CAATTG 1 cut(s) 894
MwoI GCNNNNNNNGC 4 cut(s) 104, 350, 425, 1295
NdeII GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1174
NheI GCTAGC 1 cut(s) 1133
NlaIII CATG 5 cut(s) 491, 511, 523, 562, 1132
NlaIV GGNNCC 5 cut(s) 121, 226, 246, 823, 1072
NmuCI GTSAC 2 cut(s) 638, 991
NspI RCATGY 1 cut(s) 491
OliI CACNNNNGTG 1 cut(s) 1143
PagI TCATGA 1 cut(s) 519
PciSI GCTCTTC 1 cut(s) 1050
PfeI GAWTC 2 cut(s) 523, 1060
PinAI ACCGGT 1 cut(s) 128
PkrI GCNGC 5 cut(s) 106, 153, 288, 757, 1288
PpuMI RGGWCCY 1 cut(s) 244
Psp5II RGGWCCY 1 cut(s) 244
PspEI GGTNACC 1 cut(s) 991
PspFI CCCAGC 2 cut(s) 377, 1115
PspN4I GGNNCC 5 cut(s) 121, 226, 246, 823, 1072
PspPI GGNCC 3 cut(s) 224, 244, 1071
PspPPI RGGWCCY 1 cut(s) 244
PstI CTGCAG 1 cut(s) 1226
PsuI RGATCY 3 cut(s) 33, 853, 901
PvuII CAGCTG 1 cut(s) 947
RsaI GTAC 5 cut(s) 78, 137, 173, 881, 966
RsaNI GTAC 5 cut(s) 77, 136, 172, 880, 965
RseI CAYNNNNRTG 3 cut(s) 563, 743, 1143
SapI GCTCTTC 1 cut(s) 1050
SaqAI TTAA 5 cut(s) 21, 303, 390, 603, 696
SatI GCNGC 5 cut(s) 105, 152, 287, 756, 1287
Sau3AI GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1174
Sau96I GGNCC 3 cut(s) 224, 244, 1071
SbfI CCTGCAGG 1 cut(s) 1226
ScaI AGTACT 1 cut(s) 78
SdaI CCTGCAGG 1 cut(s) 1226
SduI GDGCHC 2 cut(s) 930, 1219
SfaNI GCATC 2 cut(s) 613, 767
SfcI CTRYAG 1 cut(s) 1222
SinI GGWCC 2 cut(s) 244, 1071
SmiMI CAYNNNNRTG 3 cut(s) 563, 743, 1143
SmlI CTYRAG 3 cut(s) 146, 695, 848
SmoI CTYRAG 3 cut(s) 146, 695, 848
Sse8387I CCTGCAGG 1 cut(s) 1226
Sse9I AATT 4 cut(s) 396, 689, 894, 969
SsiI CCGC 1 cut(s) 228
SspMI CTAG 3 cut(s) 99, 384, 1134
StyI CCWWGG 1 cut(s) 175
TaaI ACNGT 2 cut(s) 61, 301
TaqI TCGA 7 cut(s) 39, 63, 69, 191, 291, 827, 1323
TasI AATT 4 cut(s) 396, 689, 894, 969
TatI WGTACW 2 cut(s) 76, 964
TfiI GAWTC 2 cut(s) 523, 1060
Tru1I TTAA 5 cut(s) 21, 303, 390, 603, 696
Tru9I TTAA 5 cut(s) 21, 303, 390, 603, 696
TscAI CASTG 2 cut(s) 121, 730
TseFI GTSAC 2 cut(s) 638, 991
TseI GCWGC 5 cut(s) 104, 151, 286, 755, 1286
Tsp45I GTSAC 2 cut(s) 638, 991
TspDTI ATGAA 3 cut(s) 508, 575, 1156
TspGWI ACGGA 2 cut(s) 1063, 1301
TspRI CASTG 2 cut(s) 121, 730
Vha464I CTTAAG 1 cut(s) 695
VpaK11BI GGWCC 2 cut(s) 244, 1071
XagI CCTNNNNNAGG 1 cut(s) 179
XapI RAATTY 1 cut(s) 396
XceI RCATGY 1 cut(s) 491
XspI CTAG 3 cut(s) 99, 384, 1134
ZrmI AGTACT 1 cut(s) 78
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.