RLG00000024113

phosphopyruvate hydratase activity

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
32048742 .. 32052577
3836 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024113

Sequence Viewer

Length: 1335 bp
ATGGCTACGATCCAGTCAGTTAAGGCGAGGCAGATCTTTGACAGCCGTGGCAATCCCACCGTCGAGGTCGATATAGTACTTTCAGATGGTACTTTGGCTAGAGCTGCTGTTCCCAGTGGTGCCTCTACCGGTGTGTACGAGGCTCTTGAGTTGCGTGATGGAGGCAAAGACTACCTTGGAAAGGGTGTGTCGAAGGCTGTCAACAATGTCAACTCAATCATCGGCCCTGCTTTGATCGGCAAGGACCCATCTGAGCAGACTGCCATTGATAACTTTATGGTTCAGCAGCTCGATGGAACTGTTAATGAGTGGGGTTGGTGCAAACAAAAGCTTGGTGCAAATGCCATATTGGCCGTGTCTCTTGCAGTCTGCAAAGCTGGGGCTAGTGTCAAGAAAATTCCTCTTTACAAGCACATTGCCAATCTTGCTGGCAACAAGAACTTGGTGTTGCCTGTTCCTGCTTTCAATGTCATCAATGGAGGATCACATGCAGGAAACAAACTTGCCATGCAGGAGTTCATGATTCTTCCTGTTGGAGCTTGCTCATTCAAAGAGGCCATGAAGATGGGTGTGGAAGTATATCATAATCTAAAGTCTGTGATTAAAAAGAAATACGGTCAGGATGCAACCAACGTCGGTGATGAAGGTGGATTTGCTCCTAACATTCAGGAGAACAAGGAAGGTCTTGAATTGCTTAAGACTGCCATTGAGAAGGCTGGATACACTGGAAAGGTTGTCATTGGAATGGATGTTGCTGCATCTGAGTTTTATGGAACAGATAAAACCTATGACCTGAACTTTAAGGAAGAGAAAAATGATGGTTCCCAGAAGATTTCCGGAAATGCTCTCAAGGATCTCTACAAGTCATTTGCGTCCGAGTACCCTATTGTCTCAATTGAAGATCCCTTTGACCAAGATGATTGGGAGCACTACTCCAAGATGACAGCTGAATGTGGAGAGCAAGTACAAATTGTTGGAGATGATCTATTGGTCACCAACCCCAAGAGGGTTGAGAAAGCAATCAAGGAGAAAAGTTGCAATGCTCTTCTTCTGAAGGTGAATCAAATTGGGTCTGTAACTGAGAGTATTGAGGCCGTAAGAATGTCTAAGAAAGCAGGGTGGGGTGTCATGGCCAGCCACAGAAGTGGAGAAACTGAGGACACTTTCATTGCTGATCTTTCTGTCGGTTTGGCCACGGGTCAAATCAAGACCGGTGCTCCCTGCAGGTCAGAGCGTCTTGCCAAGTATAACCAGCTCTTGCGTATTGAGGAGGAACTTGGTTCAGCAGCAGTCTATGCCGGAGCAAAGTTCCGTGTGCCAGTCGAACCCTATTAG

Protein Analysis

445

Amino Acids

47.79

Weight (kDa)

5.91

Isoelectric Point (pI)

37.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Enolase_N PF03952 4 - 139 2.3e-53 Enolase, N-terminal domain
Enolase_C PF00113 148 - 438 4.6e-158 Enolase, C-terminal TIM barrel domain
MR_MLE_C PF13378 279 - 405 5e-08 Enolase C-terminal domain-like
MAAL_C PF07476 297 - 401 4.6e-06 Methylaspartate ammonia-lyase C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1215
AccB1I GGYRCC 1 cut(s) 119
AccIII TCCGGA 1 cut(s) 836
AclWI GGATC 4 cut(s) 4, 490, 861, 896
AcoI YGGCCR 3 cut(s) 351, 1131, 1191
AcsI RAATTY 1 cut(s) 396
AcuI CTGAAG 1 cut(s) 1073
AfaI GTAC 5 cut(s) 78, 91, 137, 881, 966
AfiI CCNNNNNNNGG 2 cut(s) 181, 1006
AflII CTTAAG 1 cut(s) 695
AgeI ACCGGT 2 cut(s) 128, 1211
AgsI TTSAA 4 cut(s) 466, 550, 689, 899
AleI CACNNNNGTG 1 cut(s) 1143
AluBI AGCT 7 cut(s) 104, 289, 331, 377, 539, 947, 1255
AluI AGCT 7 cut(s) 104, 289, 331, 377, 539, 947, 1255
Alw21I GWGCWC 2 cut(s) 930, 1219
Alw26I GTCTC 2 cut(s) 363, 895
AlwI GGATC 4 cut(s) 4, 490, 861, 896
Aor13HI TCCGGA 1 cut(s) 836
AoxI GGCC 6 cut(s) 223, 351, 555, 1092, 1131, 1191
ApeKI GCWGC 4 cut(s) 104, 286, 755, 1286
ApoI RAATTY 1 cut(s) 396
AsiGI ACCGGT 2 cut(s) 128, 1211
AspS9I GGNCC 2 cut(s) 224, 244
AsuHPI GGTGA 3 cut(s) 650, 985, 1069
AvaII GGWCC 1 cut(s) 244
BalI TGGCCA 2 cut(s) 1133, 1193
BanI GGYRCC 1 cut(s) 119
BarI GAAGNNNNNNTAC 2 cut(s) 704, 736
Bbv12I GWGCWC 2 cut(s) 930, 1219
BbvI GCAGC 4 cut(s) 91, 298, 742, 1298
BccI CCATC 6 cut(s) 80, 152, 256, 287, 559, 812
BceAI ACGGC 3 cut(s) 30, 338, 1079
BciVI GTATCC 1 cut(s) 713
BcoDI GTCTC 2 cut(s) 363, 895
BfaI CTAG 2 cut(s) 99, 384
BfmI CTRYAG 1 cut(s) 1222
BfrI CTTAAG 1 cut(s) 695
BfuAI ACCTGC 1 cut(s) 1215
BfuI GTATCC 1 cut(s) 713
BglI GCCNNNNNGGC 1 cut(s) 350
BglII AGATCT 1 cut(s) 33
BisI GCNGC 4 cut(s) 105, 287, 756, 1287
BlsI GCNGC 4 cut(s) 106, 288, 757, 1288
BmcAI AGTACT 1 cut(s) 78
Bme18I GGWCC 1 cut(s) 244
BmgT120I GGNCC 2 cut(s) 224, 244
BmiI GGNNCC 3 cut(s) 121, 246, 823
BmrI ACTGGG 1 cut(s) 108
BmsI GCATC 2 cut(s) 613, 767
BmuI ACTGGG 1 cut(s) 108
BplI GAGNNNNNCTC 2 cut(s) 917, 949
BpuEI CTTGAG 2 cut(s) 167, 833
BsaJI CCNNGG 3 cut(s) 46, 175, 1194
BsaWI WCCGGW 3 cut(s) 128, 836, 1211
BsaXI ACNNNNNCTCC 4 cut(s) 948, 978, 1201, 1231
Bsc4I CCNNNNNNNGG 2 cut(s) 181, 1006
Bse118I RCCGGY 2 cut(s) 128, 1211
Bse1I ACTGG 4 cut(s) 13, 114, 730, 1319
Bse3DI GCAATG 3 cut(s) 414, 1045, 1167
BseAI TCCGGA 1 cut(s) 836
BseDI CCNNGG 3 cut(s) 46, 175, 1194
BseGI GGATG 2 cut(s) 628, 754
BseLI CCNNNNNNNGG 2 cut(s) 181, 1006
BseMI GCAATG 3 cut(s) 414, 1045, 1167
BseMII CTCAG 4 cut(s) 243, 753, 1071, 1146
BseNI ACTGG 4 cut(s) 13, 114, 730, 1319
BseRI GAGGAG 1 cut(s) 1283
BseXI GCAGC 4 cut(s) 91, 298, 742, 1298
BseYI CCCAGC 1 cut(s) 377
BshFI GGCC 6 cut(s) 225, 353, 557, 1094, 1133, 1193
BshNI GGYRCC 1 cut(s) 119
BshTI ACCGGT 2 cut(s) 128, 1211
BsiHKAI GWGCWC 2 cut(s) 930, 1219
BsiSI CCGG 4 cut(s) 129, 837, 1212, 1299
BslI CCNNNNNNNGG 2 cut(s) 181, 1006
BsmAI GTCTC 2 cut(s) 363, 895
BsnI GGCC 6 cut(s) 225, 353, 557, 1094, 1133, 1193
Bsp1286I GDGCHC 2 cut(s) 930, 1219
Bsp13I TCCGGA 1 cut(s) 836
Bsp143I GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1174
BspANI GGCC 6 cut(s) 225, 353, 557, 1094, 1133, 1193
BspCNI CTCAG 4 cut(s) 244, 754, 1072, 1147
BspEI TCCGGA 1 cut(s) 836
BspHI TCATGA 1 cut(s) 519
BspLI GGNNCC 3 cut(s) 121, 246, 823
BspMAI CTGCAG 1 cut(s) 1226
BspMI ACCTGC 1 cut(s) 1215
BspPI GGATC 4 cut(s) 4, 490, 861, 896
BspQI GCTCTTC 1 cut(s) 1050
BspT107I GGYRCC 1 cut(s) 119
BspTI CTTAAG 1 cut(s) 695
BsrDI GCAATG 3 cut(s) 414, 1045, 1167
BsrFI RCCGGY 2 cut(s) 128, 1211
BsrI ACTGG 4 cut(s) 13, 114, 730, 1319
BssAI RCCGGY 2 cut(s) 128, 1211
BssECI CCNNGG 3 cut(s) 46, 175, 1194
BssMI GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1174
BssT1I CCWWGG 1 cut(s) 175
Bst4CI ACNGT 3 cut(s) 61, 301, 617
Bst6I CTCTTC 2 cut(s) 801, 1050
BstAFI CTTAAG 1 cut(s) 695
BstAPI GCANNNNNTGC 1 cut(s) 1295
BstC8I GCNNGC 3 cut(s) 430, 541, 1135
BstDEI CTNAG 5 cut(s) 252, 762, 1080, 1107, 1155
BstDSI CCRYGG 2 cut(s) 46, 1194
BstEII GGTNACC 1 cut(s) 991
BstENI CCTNNNNNAGG 1 cut(s) 179
BstF5I GGATG 2 cut(s) 628, 754
BstKTI GATC 8 cut(s) 12, 36, 237, 485, 856, 904, 985, 1177
BstMAI GTCTC 2 cut(s) 363, 895
BstMBI GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1174
BstMWI GCNNNNNNNGC 4 cut(s) 104, 350, 425, 1295
BstNSI RCATGY 1 cut(s) 491
BstPI GGTNACC 1 cut(s) 991
BstSFI CTRYAG 1 cut(s) 1222
BstV1I GCAGC 4 cut(s) 91, 298, 742, 1298
BstX2I RGATCY 3 cut(s) 33, 853, 901
BstXI CCANNNNNNTGG 2 cut(s) 565, 1145
BstYI RGATCY 3 cut(s) 33, 853, 901
BsuI GTATCC 1 cut(s) 713
BsuRI GGCC 6 cut(s) 225, 353, 557, 1094, 1133, 1193
BtgI CCRYGG 2 cut(s) 46, 1194
BtsCI GGATG 2 cut(s) 628, 754
BtsIMutI CAGTG 2 cut(s) 121, 723
BveI ACCTGC 1 cut(s) 1215
Cac8I GCNNGC 3 cut(s) 430, 541, 1135
CciI TCATGA 1 cut(s) 519
Cfr10I RCCGGY 2 cut(s) 128, 1211
Cfr13I GGNCC 2 cut(s) 224, 244
CseI GACGC 2 cut(s) 861, 1223
Csp6I GTAC 5 cut(s) 77, 90, 136, 880, 965
CspAI ACCGGT 2 cut(s) 128, 1211
CviAII CATG 5 cut(s) 488, 508, 520, 559, 1129
CviQI GTAC 5 cut(s) 77, 90, 136, 880, 965
DdeI CTNAG 5 cut(s) 252, 762, 1080, 1107, 1155
DpnI GATC 8 cut(s) 11, 35, 236, 484, 855, 903, 984, 1176
DpnII GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1174
EaeI YGGCCR 3 cut(s) 351, 1131, 1191
Eam1104I CTCTTC 2 cut(s) 801, 1050
EarI CTCTTC 2 cut(s) 801, 1050
Eco130I CCWWGG 1 cut(s) 175
Eco47I GGWCC 1 cut(s) 244
Eco57I CTGAAG 1 cut(s) 1073
Eco91I GGTNACC 1 cut(s) 991
EcoNI CCTNNNNNAGG 1 cut(s) 179
EcoO109I RGGNCCY 1 cut(s) 244
EcoO65I GGTNACC 1 cut(s) 991
EcoT14I CCWWGG 1 cut(s) 175
ErhI CCWWGG 1 cut(s) 175
FaeI CATG 5 cut(s) 491, 511, 523, 562, 1132
FalI AAGNNNNNCTT 2 cut(s) 159, 191
FatI CATG 5 cut(s) 487, 507, 519, 558, 1128
Fnu4HI GCNGC 4 cut(s) 105, 287, 756, 1287
FokI GGATG 2 cut(s) 635, 761
Fsp4HI GCNGC 4 cut(s) 105, 287, 756, 1287
FspBI CTAG 2 cut(s) 99, 384
GluI GCNGC 4 cut(s) 105, 287, 756, 1287
GsaI CCCAGC 1 cut(s) 381
HaeIII GGCC 6 cut(s) 225, 353, 557, 1094, 1133, 1193
HapII CCGG 4 cut(s) 129, 837, 1212, 1299
HgaI GACGC 2 cut(s) 861, 1223
Hin1II CATG 5 cut(s) 491, 511, 523, 562, 1132
HincII GTYRAC 2 cut(s) 202, 211
HindII GTYRAC 2 cut(s) 202, 211
HindIII AAGCTT 1 cut(s) 329
HinfI GANTC 2 cut(s) 523, 1060
HpaII CCGG 4 cut(s) 129, 837, 1212, 1299
HphI GGTGA 3 cut(s) 650, 985, 1069
Hpy166II GTNNAC 3 cut(s) 136, 202, 211
Hpy188I TCNGA 6 cut(s) 85, 253, 763, 877, 1053, 1231
Hpy188III TCNNGA 8 cut(s) 146, 391, 520, 620, 668, 686, 837, 1207
Hpy8I GTNNAC 3 cut(s) 136, 202, 211
Hpy99I CGWCG 2 cut(s) 65, 638
HpyAV CCTTC 5 cut(s) 187, 638, 674, 706, 1048
HpyCH4III ACNGT 3 cut(s) 61, 301, 617
HpyCH4IV ACGT 1 cut(s) 633
HpyF10VI GCNNNNNNNGC 4 cut(s) 104, 350, 425, 1295
HpyF3I CTNAG 5 cut(s) 252, 762, 1080, 1107, 1155
HpySE526I ACGT 1 cut(s) 633
Hsp92II CATG 5 cut(s) 491, 511, 523, 562, 1132
Kpn2I TCCGGA 1 cut(s) 836
Kzo9I GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1174
LguI GCTCTTC 1 cut(s) 1050
LmnI GCTCC 5 cut(s) 536, 661, 925, 1222, 1301
Lsp1109I GCAGC 4 cut(s) 91, 298, 742, 1298
LweI GCATC 2 cut(s) 613, 767
MaeI CTAG 2 cut(s) 99, 384
MaeII ACGT 1 cut(s) 633
MaeIII GTNAC 2 cut(s) 991, 1075
MalI GATC 8 cut(s) 11, 35, 236, 484, 855, 903, 984, 1176
MboI GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1174
MboII GAAGA 7 cut(s) 518, 574, 818, 841, 911, 1037, 1040
MfeI CAATTG 1 cut(s) 894
MflI RGATCY 3 cut(s) 33, 853, 901
MhlI GDGCHC 2 cut(s) 930, 1219
MlsI TGGCCA 2 cut(s) 1133, 1193
MluCI AATT 5 cut(s) 396, 689, 894, 969, 1065
MluNI TGGCCA 2 cut(s) 1133, 1193
MmeI TCCRAC 2 cut(s) 514, 955
Mox20I TGGCCA 2 cut(s) 1133, 1193
MroI TCCGGA 1 cut(s) 836
MscI TGGCCA 2 cut(s) 1133, 1193
MseI TTAA 5 cut(s) 21, 303, 603, 696, 801
MslI CAYNNNNRTG 3 cut(s) 563, 743, 1143
Msp20I TGGCCA 2 cut(s) 1133, 1193
MspA1I CMGCKG 1 cut(s) 947
MspCI CTTAAG 1 cut(s) 695
MspI CCGG 4 cut(s) 129, 837, 1212, 1299
MunI CAATTG 1 cut(s) 894
MwoI GCNNNNNNNGC 4 cut(s) 104, 350, 425, 1295
NdeII GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1174
NlaIII CATG 5 cut(s) 491, 511, 523, 562, 1132
NlaIV GGNNCC 3 cut(s) 121, 246, 823
NmuCI GTSAC 1 cut(s) 991
NspI RCATGY 1 cut(s) 491
OliI CACNNNNGTG 1 cut(s) 1143
PagI TCATGA 1 cut(s) 519
PciSI GCTCTTC 1 cut(s) 1050
PfeI GAWTC 2 cut(s) 523, 1060
PinAI ACCGGT 2 cut(s) 128, 1211
PkrI GCNGC 4 cut(s) 106, 288, 757, 1288
PpuMI RGGWCCY 1 cut(s) 244
Psp5II RGGWCCY 1 cut(s) 244
PspEI GGTNACC 1 cut(s) 991
PspFI CCCAGC 1 cut(s) 377
PspN4I GGNNCC 3 cut(s) 121, 246, 823
PspPI GGNCC 2 cut(s) 224, 244
PspPPI RGGWCCY 1 cut(s) 244
PstI CTGCAG 1 cut(s) 1226
PsuI RGATCY 3 cut(s) 33, 853, 901
PvuII CAGCTG 1 cut(s) 947
RsaI GTAC 5 cut(s) 78, 91, 137, 881, 966
RsaNI GTAC 5 cut(s) 77, 90, 136, 880, 965
RseI CAYNNNNRTG 3 cut(s) 563, 743, 1143
SapI GCTCTTC 1 cut(s) 1050
SaqAI TTAA 5 cut(s) 21, 303, 603, 696, 801
SatI GCNGC 4 cut(s) 105, 287, 756, 1287
Sau3AI GATC 8 cut(s) 9, 33, 234, 482, 853, 901, 982, 1174
Sau96I GGNCC 2 cut(s) 224, 244
SbfI CCTGCAGG 1 cut(s) 1226
ScaI AGTACT 1 cut(s) 78
SdaI CCTGCAGG 1 cut(s) 1226
SduI GDGCHC 2 cut(s) 930, 1219
SfaNI GCATC 2 cut(s) 613, 767
SfcI CTRYAG 1 cut(s) 1222
SinI GGWCC 1 cut(s) 244
SmiMI CAYNNNNRTG 3 cut(s) 563, 743, 1143
SmlI CTYRAG 3 cut(s) 146, 695, 848
SmoI CTYRAG 3 cut(s) 146, 695, 848
Sse8387I CCTGCAGG 1 cut(s) 1226
Sse9I AATT 5 cut(s) 396, 689, 894, 969, 1065
SspMI CTAG 2 cut(s) 99, 384
StyI CCWWGG 1 cut(s) 175
TaaI ACNGT 3 cut(s) 61, 301, 617
TaiI ACGT 1 cut(s) 636
TaqI TCGA 5 cut(s) 63, 69, 191, 291, 1323
TasI AATT 5 cut(s) 396, 689, 894, 969, 1065
TatI WGTACW 2 cut(s) 76, 964
TfiI GAWTC 2 cut(s) 523, 1060
Tru1I TTAA 5 cut(s) 21, 303, 603, 696, 801
Tru9I TTAA 5 cut(s) 21, 303, 603, 696, 801
TscAI CASTG 2 cut(s) 121, 730
TseFI GTSAC 1 cut(s) 991
TseI GCWGC 4 cut(s) 104, 286, 755, 1286
Tsp45I GTSAC 1 cut(s) 991
TspDTI ATGAA 4 cut(s) 508, 575, 657, 1156
TspGWI ACGGA 1 cut(s) 1301
TspRI CASTG 2 cut(s) 121, 730
Vha464I CTTAAG 1 cut(s) 695
VpaK11BI GGWCC 1 cut(s) 244
XagI CCTNNNNNAGG 1 cut(s) 179
XapI RAATTY 1 cut(s) 396
XceI RCATGY 1 cut(s) 491
XspI CTAG 2 cut(s) 99, 384
ZrmI AGTACT 1 cut(s) 78
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.