Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0002577

Physical Location & Seq

Genomic Coordinates Reverse (-)

18303004 .. 18307053

Gene Structure 4050 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g19710.14

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGGCAACGATCAAGCTTGTTAAAGCCCGTCAAATCTTCGACAGCCGTGGGAATCCCACCGTCGAAGTTGATGTCACGCTGTCGGATGGAACCTACGCAAGAGCTGCTGTTCCAAGTGGGGCTTCCACAGGTATCTATGAAGCCCTTGAACTGAGAGATGGCGGATCGGATTATCTTGGAAAAGGTGTCCTCAAGGCTGTGGAGAATGTGAATTCGATCATTGGACCAGCTTTGATTGGAAAGGACCCAACAGAGCAGACCAAAATCGACAATTATATGGTACAGCAACTCGATGGAACTGTCAACGAATGGGGTTGGTGCAAACAGAAGCTCGGAGCAAATGCTATACTGGCGGTGTCTCTAGCTGTTTGCAAAGCCGGTGCCCTTGTGAACAAGATCCCTCTATACAAGCATATAGCCAATCTTGCTGGAAACAAGACCTTGGTGCTGCCCGTACCTGCATTTAATGTCATTAACGGAGGTTCTCATGCAGGCAATAAACTAGCAATGCAGGAATTTATGATCCTCCCTGTCGGAGCATCTTCTTTCAAGGAAGCTATGAAGATGGGTGTTGAAGTATATCATCACCTGAAGGCTGTAATTAAGAAGAAGTATGGACAAGATGCCACAAATGTTGGGGACGAAGGTGGCTTTGCCCCCAATATTCAGGAAAACAAAGAGGGTCTTGAACTGCTAAAGACAGCCATAGCTAAAGCTGGATATACTGGAAAGGTTGTCATTGGGATGGATGTTGCTGCCTCGGAATTCTACGATAACAAGGATAAGACCTATGACTTGAACTTCAAGGAAGAGAAAAATGATGGATCACAAAAGATATCTGGAGACAGTCTGAAGAATGTTTACAAGTCATTTGTTACTGAGTATCCAATTGTGTCAATTGAAGATCCGTTTGACCAGGATGATTGGGAACACTATGCAAAGATGACTGCTGAAATTGGTGAGCAAGTCCAAATTGTCGGCGATGATCTTCTCGTCACAAATCCAAAGCGAGTGGAGAAAGCAATCAATGAGAAGAGCTGCAATGCCCTTCTTTTGAAGGTGAATCAAATTGGTTCAGTTACTGAAAGTATTGAAGCTGTGAAAATGTCAAAGCGTGCTGGCTGGGGTGTCATGGCAAGTCACCGAAGTGGTGAAACTGAGGATACTTTCATTGCCGACCTTTCTGTTGGGCTGTCAACTGGACAGATTAAGACCGGAGCTCCGTGCAGATCAGAGCGGCTTGCTAAATACAACCAGCTTCTTAGGATAGAGGAGGAGCTTGGATCCGCAGCTGTCTATGCCGGTGCAAAATTCAGAGTCCCAGTGGAACCATACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00010 ko00680 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko03018 ko04066 map00010 map00680 map01100 map01110 map01120 map01130 map01200 map01230 map03018 map04066

Pfam Domains

Protein Families

Enolase_C Enolase_N

Protein Analysis

446

Amino Acids

48.13

Weight (kDa)

5.85

Isoelectric Point (pI)

38.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002577)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36530 AT2G36530
fragaria_vesca	FvH4_6g17770 FvH4_6g17770 FvH4_7g28150
malus_domestica	MD01G1185500.v1.1 MD12G1016600.v1.1 MD14G1014600.v1.1
prunus_persica	Prupe.2G281900_v2.0.a1 Prupe.2G281900_v2.0.a1 Prupe.7G118700_v2.0.a1
pyrus_communis	pycom01g19710 pycom12g01360 pycom14g01220
rosa_chinensis	RchiOBHm_Chr1g0375091 RchiOBHm_Chr3g0472001
rosa_laevigata	RLG00000000873 RLG00000024113
rosa_multiflora	Rmu_sc0000090.1_g000028 Rmu_sc0000554.1_g000017 Rmu_sc0002532.1_g000001 Rmu_sc0034562.1_g000001 Rmu_sc0039689.1_g000001
rosa_roxburghii	Rroxscaffold_4G00283020 Rroxscaffold_6G00409370
rosa_rugosa	Rorug01G0388300 Rorug01G0388400 Rorug03G0121500 Rorug03G0121600
rosa_samantha	Rh1AG398800 Rh1BG365700 Rh1CG378600 Rh1DG396400 Rh3AG173200 Rh3BG198600 Rh3CG189800 Rh3CG197100 Rh3DG175800
rosa_wichuraiana	Rw1G035410 Rw3G016750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	466
AccB1I	GGYRCC	1 cut(s)	380
AccBSI	CCGCTC	1 cut(s)	1237
AciI	CCGC	4 cut(s)	162, 353, 1237, 1287
AclWI	GGATC	7 cut(s)	172, 391, 517, 832, 899, 1278, 1291
AcsI	RAATTY	4 cut(s)	211, 515, 764, 1310
AcuI	CTGAAG	2 cut(s)	611, 872
AfaI	GTAC	2 cut(s)	282, 456
AgsI	TTSAA	9 cut(s)	149, 550, 575, 689, 799, 805, 902, 1057, 1094
AjnI	CCWGG	1 cut(s)	915
AjuI	GAANNNNNNNTTGG	2 cut(s)	106, 138
AleI	CACNNNNGTG	1 cut(s)	1146
Alw21I	GWGCWC	1 cut(s)	1222
Alw26I	GTCTC	2 cut(s)	363, 837
AlwI	GGATC	7 cut(s)	172, 391, 517, 832, 899, 1278, 1291
AlwNI	CAGNNNCTG	1 cut(s)	1082
ApeKI	GCWGC	5 cut(s)	104, 448, 755, 1038, 1289
ApoI	RAATTY	4 cut(s)	211, 515, 764, 1310
ArsI	GACNNNNNNTTYG	2 cut(s)	57, 89
AspS9I	GGNCC	2 cut(s)	224, 244
AsuHPI	GGTGA	5 cut(s)	578, 971, 1072, 1133, 1163
AvaII	GGWCC	2 cut(s)	224, 244
BaeGI	GKGCMC	1 cut(s)	385
BamHI	GGATCC	1 cut(s)	1283
BanI	GGYRCC	1 cut(s)	380
BanII	GRGCYC	1 cut(s)	1222
BarI	GAAGNNNNNNTAC	2 cut(s)	845, 877
Bbv12I	GWGCWC	1 cut(s)	1222
BbvI	GCAGC	5 cut(s)	91, 435, 742, 1025, 1301
BccI	CCATC	6 cut(s)	80, 152, 287, 559, 739, 815
BceAI	ACGGC	1 cut(s)	30
BciT130I	CCWGG	1 cut(s)	917
BciVI	GTATCC	2 cut(s)	894, 1156
BcoDI	GTCTC	2 cut(s)	363, 837
BfaI	CTAG	2 cut(s)	362, 503
BfuAI	ACCTGC	1 cut(s)	466
BfuI	GTATCC	2 cut(s)	894, 1156
BisI	GCNGC	6 cut(s)	105, 449, 756, 1039, 1238, 1290
BlsI	GCNGC	6 cut(s)	106, 450, 757, 1040, 1239, 1291
Bme1390I	CCNGG	1 cut(s)	917
Bme18I	GGWCC	2 cut(s)	224, 244
BmgT120I	GGNCC	2 cut(s)	224, 244
BmiI	GGNNCC	5 cut(s)	91, 246, 382, 1285, 1329
BmrFI	CCNGG	1 cut(s)	917
BmrI	ACTGGG	1 cut(s)	1316
BmsI	GCATC	2 cut(s)	548, 613
BmuI	ACTGGG	1 cut(s)	1316
BpmI	CTGGAG	1 cut(s)	861
BpuEI	CTTGAG	1 cut(s)	176
BsaJI	CCNNGG	3 cut(s)	46, 441, 759
BsaWI	WCCGGW	1 cut(s)	1214
BsaXI	ACNNNNNCTCC	2 cut(s)	1204, 1234
Bse118I	RCCGGY	2 cut(s)	377, 1301
Bse1I	ACTGG	4 cut(s)	354, 730, 1204, 1322
Bse3DI	GCAATG	3 cut(s)	513, 1048, 1170
BseBI	CCWGG	1 cut(s)	917
BseDI	CCNNGG	3 cut(s)	46, 441, 759
BseGI	GGATG	4 cut(s)	91, 750, 754, 925
BseMI	GCAATG	3 cut(s)	513, 1048, 1170
BseMII	CTCAG	3 cut(s)	143, 870, 1149
BseNI	ACTGG	4 cut(s)	354, 730, 1204, 1322
BseRI	GAGGAG	2 cut(s)	1286, 1289
BseSI	GKGCMC	1 cut(s)	385
BseXI	GCAGC	5 cut(s)	91, 435, 742, 1025, 1301
BseYI	CCCAGC	1 cut(s)	1122
BsgI	GTGCAG	1 cut(s)	1246
BshNI	GGYRCC	1 cut(s)	380
BsiHKAI	GWGCWC	1 cut(s)	1222
BsiSI	CCGG	3 cut(s)	378, 1215, 1302
BslFI	GGGAC	2 cut(s)	653, 1304
BsmAI	GTCTC	2 cut(s)	363, 837
BsmFI	GGGAC	2 cut(s)	653, 1304
Bsp1286I	GDGCHC	2 cut(s)	385, 1222
BspACI	CCGC	4 cut(s)	162, 353, 1237, 1287
BspCNI	CTCAG	3 cut(s)	144, 871, 1150
BspLI	GGNNCC	5 cut(s)	91, 246, 382, 1285, 1329
BspMI	ACCTGC	1 cut(s)	466
BspPI	GGATC	7 cut(s)	172, 391, 517, 832, 899, 1278, 1291
BspQI	GCTCTTC	1 cut(s)	1028
BspT107I	GGYRCC	1 cut(s)	380
BsrBI	CCGCTC	1 cut(s)	1237
BsrDI	GCAATG	3 cut(s)	513, 1048, 1170
BsrFI	RCCGGY	2 cut(s)	377, 1301
BsrI	ACTGG	4 cut(s)	354, 730, 1204, 1322
BssAI	RCCGGY	2 cut(s)	377, 1301
BssECI	CCNNGG	3 cut(s)	46, 441, 759
BssT1I	CCWWGG	1 cut(s)	441
Bst2UI	CCWGG	1 cut(s)	917
Bst4CI	ACNGT	3 cut(s)	61, 301, 848
Bst6I	CTCTTC	2 cut(s)	804, 1028
BstAPI	GCANNNNNTGC	1 cut(s)	104
BstC8I	GCNNGC	4 cut(s)	493, 1116, 1120, 1242
BstDEI	CTNAG	4 cut(s)	152, 879, 1158, 1262
BstDSI	CCRYGG	1 cut(s)	46
BstF5I	GGATG	4 cut(s)	91, 750, 754, 925
BstMAI	GTCTC	2 cut(s)	363, 837
BstMWI	GCNNNNNNNGC	4 cut(s)	104, 350, 425, 1298
BstNI	CCWGG	1 cut(s)	917
BstSCI	CCNGG	1 cut(s)	915
BstSLI	GKGCMC	1 cut(s)	385
BstV1I	GCAGC	5 cut(s)	91, 435, 742, 1025, 1301
BstX2I	RGATCY	3 cut(s)	396, 904, 1283
BstYI	RGATCY	3 cut(s)	396, 904, 1283
BsuI	GTATCC	2 cut(s)	894, 1156
BtgI	CCRYGG	1 cut(s)	46
BtgZI	GCGATG	1 cut(s)	996
BtsCI	GGATG	4 cut(s)	91, 750, 754, 925
BtsIMutI	CAGTG	1 cut(s)	1329
BveI	ACCTGC	1 cut(s)	466
Cac8I	GCNNGC	4 cut(s)	493, 1116, 1120, 1242
CaiI	CAGNNNCTG	1 cut(s)	1082
Cfr10I	RCCGGY	2 cut(s)	377, 1301
Cfr13I	GGNCC	2 cut(s)	224, 244
Csp6I	GTAC	2 cut(s)	281, 455
CspCI	CAANNNNNGTGG	4 cut(s)	616, 651, 993, 1028
CviAII	CATG	2 cut(s)	488, 1132
CviQI	GTAC	2 cut(s)	281, 455
DdeI	CTNAG	4 cut(s)	152, 879, 1158, 1262
Eam1104I	CTCTTC	2 cut(s)	804, 1028
EarI	CTCTTC	2 cut(s)	804, 1028
EciI	GGCGGA	1 cut(s)	177
Ecl136II	GAGCTC	1 cut(s)	1220
Eco130I	CCWWGG	1 cut(s)	441
Eco24I	GRGCYC	1 cut(s)	1222
Eco32I	GATATC	1 cut(s)	837
Eco47I	GGWCC	2 cut(s)	224, 244
Eco53kI	GAGCTC	1 cut(s)	1220
Eco57I	CTGAAG	2 cut(s)	611, 872
EcoICRI	GAGCTC	1 cut(s)	1220
EcoO109I	RGGNCCY	1 cut(s)	244
EcoRI	GAATTC	2 cut(s)	211, 764
EcoRII	CCWGG	1 cut(s)	915
EcoRV	GATATC	1 cut(s)	837
EcoT14I	CCWWGG	1 cut(s)	441
EcoT38I	GRGCYC	1 cut(s)	1222
ErhI	CCWWGG	1 cut(s)	441
FaeI	CATG	2 cut(s)	491, 1135
FalI	AAGNNNNNCTT	4 cut(s)	106, 138, 669, 701
FaqI	GGGAC	2 cut(s)	653, 1304
FatI	CATG	2 cut(s)	487, 1131
Fnu4HI	GCNGC	6 cut(s)	105, 449, 756, 1039, 1238, 1290
FokI	GGATG	4 cut(s)	98, 757, 761, 932
FriOI	GRGCYC	1 cut(s)	1222
Fsp4HI	GCNGC	6 cut(s)	105, 449, 756, 1039, 1238, 1290
FspBI	CTAG	2 cut(s)	362, 503
GluI	GCNGC	6 cut(s)	105, 449, 756, 1039, 1238, 1290
GsaI	CCCAGC	1 cut(s)	1126
GsuI	CTGGAG	1 cut(s)	861
HapII	CCGG	3 cut(s)	378, 1215, 1302
Hin1II	CATG	2 cut(s)	491, 1135
HincII	GTYRAC	2 cut(s)	304, 1197
HindII	GTYRAC	2 cut(s)	304, 1197
HindIII	AAGCTT	1 cut(s)	14
HinfI	GANTC	3 cut(s)	52, 1063, 1317
HpaII	CCGG	3 cut(s)	378, 1215, 1302
HphI	GGTGA	5 cut(s)	578, 971, 1072, 1133, 1163
Hpy166II	GTNNAC	4 cut(s)	304, 391, 862, 1197
Hpy188I	TCNGA	8 cut(s)	85, 169, 335, 536, 763, 852, 1234, 1316
Hpy188III	TCNNGA	3 cut(s)	668, 686, 840
Hpy8I	GTNNAC	4 cut(s)	304, 391, 862, 1197
Hpy99I	CGWCG	1 cut(s)	65
HpyAV	CCTTC	4 cut(s)	586, 638, 1051, 1058
HpyCH4III	ACNGT	3 cut(s)	61, 301, 848
HpyCH4V	TGCA	9 cut(s)	321, 372, 461, 491, 511, 938, 1041, 1227, 1307
HpyF10VI	GCNNNNNNNGC	4 cut(s)	104, 350, 425, 1298
HpyF3I	CTNAG	4 cut(s)	152, 879, 1158, 1262
Hsp92II	CATG	2 cut(s)	491, 1135
LguI	GCTCTTC	1 cut(s)	1028
LmnI	GCTCC	5 cut(s)	335, 536, 1217, 1225, 1276
Lsp1109I	GCAGC	5 cut(s)	91, 435, 742, 1025, 1301
LweI	GCATC	2 cut(s)	548, 613
MaeI	CTAG	2 cut(s)	362, 503
MaeIII	GTNAC	5 cut(s)	73, 874, 994, 1078, 1139
MbiI	CCGCTC	1 cut(s)	1237
MboII	GAAGA	9 cut(s)	28, 534, 574, 619, 821, 865, 914, 980, 1045
MfeI	CAATTG	2 cut(s)	888, 897
MflI	RGATCY	3 cut(s)	396, 904, 1283
MhlI	GDGCHC	2 cut(s)	385, 1222
MlyI	GAGTC	1 cut(s)	1326
MmeI	TCCRAC	2 cut(s)	63, 514
MnlI	CCTC	9 cut(s)	200, 411, 473, 536, 673, 769, 1153, 1264, 1267
MseI	TTAA	5 cut(s)	21, 465, 474, 603, 1209
MslI	CAYNNNNRTG	2 cut(s)	743, 1146
MspA1I	CMGCKG	1 cut(s)	1292
MspI	CCGG	3 cut(s)	378, 1215, 1302
MspR9I	CCNGG	1 cut(s)	917
MunI	CAATTG	2 cut(s)	888, 897
MvaI	CCWGG	1 cut(s)	917
MwoI	GCNNNNNNNGC	4 cut(s)	104, 350, 425, 1298
NlaIII	CATG	2 cut(s)	491, 1135
NlaIV	GGNNCC	5 cut(s)	91, 246, 382, 1285, 1329
NmuCI	GTSAC	3 cut(s)	73, 994, 1139
OliI	CACNNNNGTG	1 cut(s)	1146
PciSI	GCTCTTC	1 cut(s)	1028
PfeI	GAWTC	2 cut(s)	52, 1063
PkrI	GCNGC	6 cut(s)	106, 450, 757, 1040, 1239, 1291
PleI	GAGTC	1 cut(s)	1325
PpsI	GAGTC	1 cut(s)	1325
PpuMI	RGGWCCY	1 cut(s)	244
Psp124BI	GAGCTC	1 cut(s)	1222
Psp5II	RGGWCCY	1 cut(s)	244
Psp6I	CCWGG	1 cut(s)	915
PspFI	CCCAGC	1 cut(s)	1122
PspGI	CCWGG	1 cut(s)	915
PspN4I	GGNNCC	5 cut(s)	91, 246, 382, 1285, 1329
PspPI	GGNCC	2 cut(s)	224, 244
PspPPI	RGGWCCY	1 cut(s)	244
PstNI	CAGNNNCTG	1 cut(s)	1082
PsuI	RGATCY	3 cut(s)	396, 904, 1283
PvuII	CAGCTG	1 cut(s)	1292
RsaI	GTAC	2 cut(s)	282, 456
RsaNI	GTAC	2 cut(s)	281, 455
RseI	CAYNNNNRTG	2 cut(s)	743, 1146
SacI	GAGCTC	1 cut(s)	1222
SapI	GCTCTTC	1 cut(s)	1028
SaqAI	TTAA	5 cut(s)	21, 465, 474, 603, 1209
SatI	GCNGC	6 cut(s)	105, 449, 756, 1039, 1238, 1290
Sau96I	GGNCC	2 cut(s)	224, 244
SchI	GAGTC	1 cut(s)	1326
ScrFI	CCNGG	1 cut(s)	917
SduI	GDGCHC	2 cut(s)	385, 1222
SfaNI	GCATC	2 cut(s)	548, 613
SinI	GGWCC	2 cut(s)	224, 244
SmiMI	CAYNNNNRTG	2 cut(s)	743, 1146
SmlI	CTYRAG	1 cut(s)	191
SmoI	CTYRAG	1 cut(s)	191
SsiI	CCGC	4 cut(s)	162, 353, 1237, 1287
SspI	AATATT	1 cut(s)	664
SspMI	CTAG	2 cut(s)	362, 503
SstI	GAGCTC	1 cut(s)	1222
StyD4I	CCNGG	1 cut(s)	915
StyI	CCWWGG	1 cut(s)	441
TaaI	ACNGT	3 cut(s)	61, 301, 848
TaqI	TCGA	5 cut(s)	39, 63, 215, 267, 291
TauI	GCSGC	1 cut(s)	1240
TfiI	GAWTC	2 cut(s)	52, 1063
Tru1I	TTAA	5 cut(s)	21, 465, 474, 603, 1209
Tru9I	TTAA	5 cut(s)	21, 465, 474, 603, 1209
TscAI	CASTG	1 cut(s)	1329
TseFI	GTSAC	3 cut(s)	73, 994, 1139
TseI	GCWGC	5 cut(s)	104, 448, 755, 1038, 1289
Tsp45I	GTSAC	3 cut(s)	73, 994, 1139
TspDTI	ATGAA	3 cut(s)	153, 575, 1159
TspGWI	ACGGA	3 cut(s)	492, 897, 1212
TspRI	CASTG	1 cut(s)	1329
VpaK11BI	GGWCC	2 cut(s)	224, 244
XapI	RAATTY	4 cut(s)	211, 515, 764, 1310
XspI	CTAG	2 cut(s)	362, 503

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.