Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002577

Physical Location & Seq

Genomic Coordinates Reverse (-)

28047804 .. 28051687

Gene Structure 3884 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G281900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1341 bp

ATGGCCACGACGATCAAGCTTGTTAAAGCCCGGCAAATCTTCGACAGCCGTGGAAATCCCACCGTCGAAGTTGATGTTACACTCTTCGATGGAACCTACGCAAGAGCAGCTGTTCCAAGTGGAGCTTCCACAGGTATCTATGAAGCCCTGGAGTTGAGAGATGGTGGATCGGATTATCTTGGGAAAGGTGTCCTTAAAGCTGTGGAGAATGTGAATTCGATCATTGGACCTGCTTTGATTGGAAAGGACCCAACAGAGCAGACCAAAATTGACAATTATATGGTACAACAGCTTGATGGAACTGTTAACGAATGGGGTTGGTGCAAACAGAAGCTTGGAGCAAATGCTATACTGGCAGTGTCTCTTGCTGTCTGCAAAGCGGGTGCCATTGTGAACAAGATCCCTCTTTACAAGCACATTGCCAATCTTGCTGGAAACAAGACCTTGGTGCTACCTGTACCTGCATTTAATGTCATTAATGGAGGTTCTCATGCAGGCAATAAACTAGCAATGCAGGAATTCATGATTCTCCCTGTTGGAGCATCGTCTTTCAAGGAAGCCATGAAGATGGGTGTAGAAGTGTATCATCACCTGAAGGCTGTAATTAAGAAGAAGTATGGACAAGATGCCACGAATGTTGGGGATGAAGGCGGCTTTGCACCTAATATTCAGGAAAACAAAGAGGGTCTTGAACTGCTGAAGACAGCCATAGCTAAAGCTGGATATACTGGAAAGGTTGTCATTGGGATGGATGTTGCTGCTTCAGAATTCTATGATAACAAGGATAAGACTTATGACTTGAATTTCAAGGAAGAGAAAAATGATGGATCACAAAAAATATCAGGAGACAGTCTGAAGAATGTTTACAAGTCATTTGTTACTGAATATCCAATTGTGTCGATTGAAGATCCCTTTGATCAAGATGATTGGGAACACTATGCAAAGATGACTGCTGAAATTGGTGAGCAAGTGCAAATTGTTGGCGATGATCTCCTTGTCACAAATCCAAAGCGAGTGGAGAAAGCAATCAAGGAGAAGTCCTGCAATGCTCTTCTTTTGAAGGTGAATCAAATTGGTTCAGTAACTGAAAGTATTGAAGCAGTGAAAATGTCAAAACGTGCTGGCTGGGGTGTCATGGCAAGTCACCGAAGTGGTGAAACTGAGGATACTTTCATTGCTGACCTTTCTGTTGGGCTGTCGACGGGCCAAATTAAGACTGGAGCTCCTTGCAGATCAGAGCGGCTTGCTAAATACAACCAGCTTCTTAGGATAGAAGAGGAGCTTGGATCTGCAGCAGTCTATGCCGGATCGAAATTCAGAGTACCAGTGGAACCATACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00010 ko00680 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko03018 ko04066 map00010 map00680 map01100 map01110 map01120 map01130 map01200 map01230 map03018 map04066

Pfam Domains

Protein Families

Enolase_C Enolase_N

Protein Analysis

447

Amino Acids

48.32

Weight (kDa)

6.0

Isoelectric Point (pI)

38.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002577)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36530 AT2G36530
fragaria_vesca	FvH4_6g17770 FvH4_6g17770 FvH4_7g28150
malus_domestica	MD01G1185500.v1.1 MD12G1016600.v1.1 MD14G1014600.v1.1
prunus_persica	Prupe.2G281900_v2.0.a1 Prupe.2G281900_v2.0.a1 Prupe.7G118700_v2.0.a1
pyrus_communis	pycom01g19710 pycom12g01360 pycom14g01220
rosa_chinensis	RchiOBHm_Chr1g0375091 RchiOBHm_Chr3g0472001
rosa_laevigata	RLG00000000873 RLG00000024113
rosa_multiflora	Rmu_sc0000090.1_g000028 Rmu_sc0000554.1_g000017 Rmu_sc0002532.1_g000001 Rmu_sc0034562.1_g000001 Rmu_sc0039689.1_g000001
rosa_roxburghii	Rroxscaffold_4G00283020 Rroxscaffold_6G00409370
rosa_rugosa	Rorug01G0388300 Rorug01G0388400 Rorug03G0121500 Rorug03G0121600
rosa_samantha	Rh1AG398800 Rh1BG365700 Rh1CG378600 Rh1DG396400 Rh3AG173200 Rh3BG198600 Rh3CG189800 Rh3CG197100 Rh3DG175800
rosa_wichuraiana	Rw1G035410 Rw3G016750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	238, 469
AccB1I	GGYRCC	1 cut(s)	383
AccBSI	CCGCTC	1 cut(s)	1240
AccI	GTMKAC	1 cut(s)	1199
AciI	CCGC	3 cut(s)	380, 651, 1240
AclWI	GGATC	6 cut(s)	175, 394, 835, 902, 1294, 1315
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	5 cut(s)	214, 518, 767, 802, 1313
AcuI	CTGAAG	4 cut(s)	614, 719, 747, 875
AfaI	GTAC	3 cut(s)	285, 459, 1323
AgsI	TTSAA	7 cut(s)	553, 692, 802, 808, 905, 1060, 1097
AjnI	CCWGG	1 cut(s)	147
AjuI	GAANNNNNNNTTGG	4 cut(s)	109, 141, 1266, 1298
AleI	CACNNNNGTG	1 cut(s)	1149
Alw21I	GWGCWC	1 cut(s)	1225
Alw26I	GTCTC	2 cut(s)	366, 840
AlwI	GGATC	6 cut(s)	175, 394, 835, 902, 1294, 1315
AlwNI	CAGNNNCTG	1 cut(s)	1085
AoxI	GGCC	2 cut(s)	3, 1204
ApeKI	GCWGC	3 cut(s)	107, 758, 1292
ApoI	RAATTY	5 cut(s)	214, 518, 767, 802, 1313
AseI	ATTAAT	1 cut(s)	477
AspS9I	GGNCC	3 cut(s)	227, 247, 1204
AsuC2I	CCSGG	1 cut(s)	31
AsuHPI	GGTGA	5 cut(s)	581, 974, 1075, 1136, 1166
AvaII	GGWCC	2 cut(s)	227, 247
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	1 cut(s)	383
BanII	GRGCYC	1 cut(s)	1225
BarI	GAAGNNNNNNTAC	2 cut(s)	848, 880
BbsI	GAAGAC	1 cut(s)	707
Bbv12I	GWGCWC	1 cut(s)	1225
BbvI	GCAGC	3 cut(s)	119, 745, 1304
BccI	CCATC	6 cut(s)	83, 155, 290, 562, 742, 818
BceAI	ACGGC	1 cut(s)	33
BciT130I	CCWGG	1 cut(s)	149
BciVI	GTATCC	1 cut(s)	1159
BclI	TGATCA	1 cut(s)	916
BcnI	CCSGG	1 cut(s)	31
BcoDI	GTCTC	2 cut(s)	366, 840
BfaI	CTAG	1 cut(s)	506
BfmI	CTRYAG	1 cut(s)	1290
BfuAI	ACCTGC	2 cut(s)	238, 469
BfuI	GTATCC	1 cut(s)	1159
BisI	GCNGC	5 cut(s)	108, 652, 759, 1241, 1293
BlsI	GCNGC	5 cut(s)	109, 653, 760, 1242, 1294
Bme1390I	CCNGG	2 cut(s)	31, 149
Bme18I	GGWCC	2 cut(s)	227, 247
BmgT120I	GGNCC	3 cut(s)	227, 247, 1204
BmiI	GGNNCC	4 cut(s)	94, 249, 385, 1332
BmrFI	CCNGG	2 cut(s)	31, 149
BmsI	GCATC	2 cut(s)	551, 616
BpiI	GAAGAC	1 cut(s)	707
BpmI	CTGGAG	2 cut(s)	170, 1239
BpuMI	CCSGG	1 cut(s)	31
BsaJI	CCNNGG	3 cut(s)	49, 147, 444
BsaXI	ACNNNNNCTCC	2 cut(s)	1207, 1237
Bse1I	ACTGG	4 cut(s)	357, 733, 1222, 1325
Bse3DI	GCAATG	4 cut(s)	417, 516, 1051, 1173
BseBI	CCWGG	1 cut(s)	149
BseDI	CCNNGG	3 cut(s)	49, 147, 444
BseGI	GGATG	3 cut(s)	649, 753, 757
BseMI	GCAATG	4 cut(s)	417, 516, 1051, 1173
BseMII	CTCAG	1 cut(s)	1152
BseNI	ACTGG	4 cut(s)	357, 733, 1222, 1325
BseRI	GAGGAG	1 cut(s)	1292
BseXI	GCAGC	3 cut(s)	119, 745, 1304
BseYI	CCCAGC	1 cut(s)	1125
BshFI	GGCC	2 cut(s)	5, 1206
BshNI	GGYRCC	1 cut(s)	383
BsiHKAI	GWGCWC	1 cut(s)	1225
BsiSI	CCGG	2 cut(s)	31, 1305
BsmAI	GTCTC	2 cut(s)	366, 840
BsnI	GGCC	2 cut(s)	5, 1206
Bsp1286I	GDGCHC	1 cut(s)	1225
BspACI	CCGC	3 cut(s)	380, 651, 1240
BspANI	GGCC	2 cut(s)	5, 1206
BspCNI	CTCAG	1 cut(s)	1153
BspHI	TCATGA	1 cut(s)	522
BspLI	GGNNCC	4 cut(s)	94, 249, 385, 1332
BspMAI	CTGCAG	1 cut(s)	1294
BspMI	ACCTGC	2 cut(s)	238, 469
BspPI	GGATC	6 cut(s)	175, 394, 835, 902, 1294, 1315
BspQI	GCTCTTC	1 cut(s)	1056
BspT107I	GGYRCC	1 cut(s)	383
BsrBI	CCGCTC	1 cut(s)	1240
BsrDI	GCAATG	4 cut(s)	417, 516, 1051, 1173
BsrI	ACTGG	4 cut(s)	357, 733, 1222, 1325
BssECI	CCNNGG	3 cut(s)	49, 147, 444
BssT1I	CCWWGG	1 cut(s)	444
Bst2UI	CCWGG	1 cut(s)	149
Bst4CI	ACNGT	3 cut(s)	64, 304, 851
Bst6I	CTCTTC	4 cut(s)	89, 807, 1056, 1269
BstAPI	GCANNNNNTGC	1 cut(s)	1301
BstC8I	GCNNGC	3 cut(s)	496, 1123, 1245
BstDEI	CTNAG	2 cut(s)	1161, 1265
BstDSI	CCRYGG	1 cut(s)	49
BstF5I	GGATG	3 cut(s)	649, 753, 757
BstMAI	GTCTC	2 cut(s)	366, 840
BstMWI	GCNNNNNNNGC	4 cut(s)	107, 353, 428, 1301
BstNI	CCWGG	1 cut(s)	149
BstSCI	CCNGG	2 cut(s)	29, 147
BstSFI	CTRYAG	1 cut(s)	1290
BstV1I	GCAGC	3 cut(s)	119, 745, 1304
BstV2I	GAAGAC	1 cut(s)	707
BstX2I	RGATCY	3 cut(s)	399, 907, 1286
BstXI	CCANNNNNNTGG	1 cut(s)	568
BstYI	RGATCY	3 cut(s)	399, 907, 1286
BsuI	GTATCC	1 cut(s)	1159
BsuRI	GGCC	2 cut(s)	5, 1206
BtgI	CCRYGG	1 cut(s)	49
BtgZI	GCGATG	1 cut(s)	999
BtsCI	GGATG	3 cut(s)	649, 753, 757
BtsI	GCAGTG	2 cut(s)	363, 1107
BtsIMutI	CAGTG	3 cut(s)	363, 1107, 1332
BveI	ACCTGC	2 cut(s)	238, 469
Cac8I	GCNNGC	3 cut(s)	496, 1123, 1245
CaiI	CAGNNNCTG	1 cut(s)	1085
CciI	TCATGA	1 cut(s)	522
Cfr13I	GGNCC	3 cut(s)	227, 247, 1204
Csp6I	GTAC	3 cut(s)	284, 458, 1322
CspCI	CAANNNNNGTGG	4 cut(s)	619, 654, 996, 1031
CviAII	CATG	4 cut(s)	491, 523, 562, 1135
CviQI	GTAC	3 cut(s)	284, 458, 1322
DdeI	CTNAG	2 cut(s)	1161, 1265
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	4 cut(s)	89, 807, 1056, 1269
EarI	CTCTTC	4 cut(s)	89, 807, 1056, 1269
Ecl136II	GAGCTC	1 cut(s)	1223
Eco130I	CCWWGG	1 cut(s)	444
Eco24I	GRGCYC	1 cut(s)	1225
Eco47I	GGWCC	2 cut(s)	227, 247
Eco53kI	GAGCTC	1 cut(s)	1223
Eco57I	CTGAAG	4 cut(s)	614, 719, 747, 875
EcoICRI	GAGCTC	1 cut(s)	1223
EcoO109I	RGGNCCY	1 cut(s)	247
EcoRI	GAATTC	3 cut(s)	214, 518, 767
EcoRII	CCWGG	1 cut(s)	147
EcoT14I	CCWWGG	1 cut(s)	444
EcoT38I	GRGCYC	1 cut(s)	1225
ErhI	CCWWGG	1 cut(s)	444
FaeI	CATG	4 cut(s)	494, 526, 565, 1138
FalI	AAGNNNNNCTT	8 cut(s)	109, 141, 177, 209, 672, 704, 1266, 1298
FatI	CATG	4 cut(s)	490, 522, 561, 1134
FauI	CCCGC	1 cut(s)	373
FbaI	TGATCA	1 cut(s)	916
FblI	GTMKAC	1 cut(s)	1199
Fnu4HI	GCNGC	5 cut(s)	108, 652, 759, 1241, 1293
FokI	GGATG	3 cut(s)	656, 760, 764
FriOI	GRGCYC	1 cut(s)	1225
Fsp4HI	GCNGC	5 cut(s)	108, 652, 759, 1241, 1293
FspBI	CTAG	1 cut(s)	506
GluI	GCNGC	5 cut(s)	108, 652, 759, 1241, 1293
GsaI	CCCAGC	1 cut(s)	1129
GsuI	CTGGAG	2 cut(s)	170, 1239
HaeIII	GGCC	2 cut(s)	5, 1206
HapII	CCGG	2 cut(s)	31, 1305
Hin1II	CATG	4 cut(s)	494, 526, 565, 1138
HincII	GTYRAC	2 cut(s)	307, 1200
HindII	GTYRAC	2 cut(s)	307, 1200
HindIII	AAGCTT	2 cut(s)	17, 332
HinfI	GANTC	2 cut(s)	526, 1066
HpaI	GTTAAC	1 cut(s)	307
HpaII	CCGG	2 cut(s)	31, 1305
HphI	GGTGA	5 cut(s)	581, 974, 1075, 1136, 1166
Hpy166II	GTNNAC	4 cut(s)	307, 394, 865, 1200
Hpy188I	TCNGA	5 cut(s)	172, 766, 855, 1237, 1319
Hpy188III	TCNNGA	5 cut(s)	523, 671, 689, 843, 920
Hpy8I	GTNNAC	4 cut(s)	307, 394, 865, 1200
Hpy99I	CGWCG	3 cut(s)	13, 68, 1204
HpyAV	CCTTC	3 cut(s)	589, 641, 1054
HpyCH4III	ACNGT	3 cut(s)	64, 304, 851
HpyCH4IV	ACGT	1 cut(s)	1117
HpyF10VI	GCNNNNNNNGC	4 cut(s)	107, 353, 428, 1301
HpyF3I	CTNAG	2 cut(s)	1161, 1265
HpySE526I	ACGT	1 cut(s)	1117
Hsp92II	CATG	4 cut(s)	494, 526, 565, 1138
Ksp22I	TGATCA	1 cut(s)	916
KspAI	GTTAAC	1 cut(s)	307
LguI	GCTCTTC	1 cut(s)	1056
LmnI	GCTCC	6 cut(s)	122, 338, 539, 1220, 1228, 1279
Lsp1109I	GCAGC	3 cut(s)	119, 745, 1304
LweI	GCATC	2 cut(s)	551, 616
MaeI	CTAG	1 cut(s)	506
MaeII	ACGT	1 cut(s)	1117
MaeIII	GTNAC	5 cut(s)	76, 877, 997, 1081, 1142
MbiI	CCGCTC	1 cut(s)	1240
MfeI	CAATTG	1 cut(s)	891
MflI	RGATCY	3 cut(s)	399, 907, 1286
MhlI	GDGCHC	1 cut(s)	1225
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MmeI	TCCRAC	1 cut(s)	517
MnlI	CCTC	5 cut(s)	414, 476, 676, 1156, 1270
Mox20I	TGGCCA	1 cut(s)	5
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	7 cut(s)	24, 195, 306, 468, 477, 606, 1212
MslI	CAYNNNNRTG	3 cut(s)	566, 746, 1149
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	110
MspI	CCGG	2 cut(s)	31, 1305
MspR9I	CCNGG	2 cut(s)	31, 149
MunI	CAATTG	1 cut(s)	891
MvaI	CCWGG	1 cut(s)	149
MwoI	GCNNNNNNNGC	4 cut(s)	107, 353, 428, 1301
NciI	CCSGG	1 cut(s)	31
NlaIII	CATG	4 cut(s)	494, 526, 565, 1138
NlaIV	GGNNCC	4 cut(s)	94, 249, 385, 1332
NmuCI	GTSAC	2 cut(s)	997, 1142
OliI	CACNNNNGTG	1 cut(s)	1149
PagI	TCATGA	1 cut(s)	522
PciSI	GCTCTTC	1 cut(s)	1056
PfeI	GAWTC	2 cut(s)	526, 1066
PkrI	GCNGC	5 cut(s)	109, 653, 760, 1242, 1294
PpuMI	RGGWCCY	1 cut(s)	247
PshBI	ATTAAT	1 cut(s)	477
Psp124BI	GAGCTC	1 cut(s)	1225
Psp5II	RGGWCCY	1 cut(s)	247
Psp6I	CCWGG	1 cut(s)	147
PspFI	CCCAGC	1 cut(s)	1125
PspGI	CCWGG	1 cut(s)	147
PspN4I	GGNNCC	4 cut(s)	94, 249, 385, 1332
PspPI	GGNCC	3 cut(s)	227, 247, 1204
PspPPI	RGGWCCY	1 cut(s)	247
PstI	CTGCAG	1 cut(s)	1294
PstNI	CAGNNNCTG	1 cut(s)	1085
PsuI	RGATCY	3 cut(s)	399, 907, 1286
PvuII	CAGCTG	1 cut(s)	110
RsaI	GTAC	3 cut(s)	285, 459, 1323
RsaNI	GTAC	3 cut(s)	284, 458, 1322
RseI	CAYNNNNRTG	3 cut(s)	566, 746, 1149
SacI	GAGCTC	1 cut(s)	1225
SalI	GTCGAC	1 cut(s)	1198
SapI	GCTCTTC	1 cut(s)	1056
SaqAI	TTAA	7 cut(s)	24, 195, 306, 468, 477, 606, 1212
SatI	GCNGC	5 cut(s)	108, 652, 759, 1241, 1293
Sau96I	GGNCC	3 cut(s)	227, 247, 1204
ScrFI	CCNGG	2 cut(s)	31, 149
SduI	GDGCHC	1 cut(s)	1225
SfaNI	GCATC	2 cut(s)	551, 616
SfcI	CTRYAG	1 cut(s)	1290
SinI	GGWCC	2 cut(s)	227, 247
SmiMI	CAYNNNNRTG	3 cut(s)	566, 746, 1149
SsiI	CCGC	3 cut(s)	380, 651, 1240
SspI	AATATT	1 cut(s)	667
SspMI	CTAG	1 cut(s)	506
SstI	GAGCTC	1 cut(s)	1225
StyD4I	CCNGG	2 cut(s)	29, 147
StyI	CCWWGG	1 cut(s)	444
TaaI	ACNGT	3 cut(s)	64, 304, 851
TaiI	ACGT	1 cut(s)	1120
TaqI	TCGA	7 cut(s)	42, 66, 87, 218, 899, 1199, 1310
TauI	GCSGC	2 cut(s)	654, 1243
TfiI	GAWTC	2 cut(s)	526, 1066
Tru1I	TTAA	7 cut(s)	24, 195, 306, 468, 477, 606, 1212
Tru9I	TTAA	7 cut(s)	24, 195, 306, 468, 477, 606, 1212
TscAI	CASTG	3 cut(s)	363, 1107, 1332
TseFI	GTSAC	2 cut(s)	997, 1142
TseI	GCWGC	3 cut(s)	107, 758, 1292
Tsp45I	GTSAC	2 cut(s)	997, 1142
TspDTI	ATGAA	5 cut(s)	156, 511, 578, 660, 1162
TspRI	CASTG	3 cut(s)	363, 1107, 1332
VpaK11BI	GGWCC	2 cut(s)	227, 247
VspI	ATTAAT	1 cut(s)	477
XapI	RAATTY	5 cut(s)	214, 518, 767, 802, 1313
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1214
XmiI	GTMKAC	1 cut(s)	1199
XspI	CTAG	1 cut(s)	506

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.