Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0002577

Physical Location & Seq

Genomic Coordinates Forward (+)

49967663 .. 49971993

Gene Structure 4331 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0388300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2187 bp

ATGGCTCTTCGATGGTTTCTCCTTCTCAACCTCATTTGCAATATTCTACTGCTTGTCGATGTTACTCACTCAGCTGCTCAGGATGCCCGAAAGGCTTATGTTGTGTATATGGGCGACAAGCCAAAGAACGGGCCCATATTACCTGATCATCATGTGGATATGCTACAGGACGTAGTTGACAGTAGCAACATTGATATTGCACATGAAGATCTGCTTCTTCACAGCTACAAGAGAAGTTTCAATGGATTTGCTGCAATGCTCACAGAGCAAGAAGCACAAAAAATGATTGGAATGGATGGTGTAGTATCTGTCTTCCCAAGCAAACAAAGGAGCGCCAAAACAACAAAGTCATGGAACTTTCTTGGATTTCCAGAAACAGTAAAGAGAAGCGCCCTTGAAAGGGATATCATTGTAGGTGTGATGGATAGTGGAATTTGGCCAGAGTCGGACAGCTTTAGTGATGCTGGTTTTGGTCCTCCACCCAAGAAATGGAAAGGCAAATGTCAAGGCCATGGAAATCTTACTTGTAACAATAAAATCATCGGAGCACAGTATTACCGTGCTTCTCGATCCTTCGAAGAAGATGTTGAGTCTCCAAGAGACTCAAGCGGTCATGGAACTCACACTGCATCAACAGCAGCTGGGAACACAGTGAGCAAGGCAAGCCTAAATGGTTTAGGGTTGGGAACAGCAAGAGGAGGGGTACCATCAGCACGTATTGCTATGTACAAAGTATGCTGGGGCAGCAGCATCAGCTGTGAAGATGCTGACATTCTAGCGGCATTCGATGATGCCATTGCTGACAGTGTCGACATTCTCTCTATTTCCGTTGGAGGCCTTATTCCATCTGATTATTTGAATGATCCATTTGCAATTGGGTCATTTCACGCTACCAGAAATGGGATATTAGTTTCCATGGCCGCTGGTAACGAAGGTCCGAGGGCAAAAACTGTGACAAATTTTGCACCATGGCAACTTTCTGTGGCTGCTACCACCATAAACCGCCAGTTCATCACCAAGGTTCAATTGGGTAACGGTAAACTCTATGAGGGACTCTTACCAAACATATATGACCTCCGGGACGCACCCAATAAAAAAGCAGGTGTTGATGGGACTATCTCCAGGTTTTGTATAAGAGATGCCTTAGAAGAAGATTTGATCAAAGGTAAAATTGTGCTTTGTGATGGCCCTATCGATGGGGCTGGGGTTGGGGCCATATTGGGTGGTGCAGCAGGAATTGTTCTGACAGGAAAAAAAGTCGTTGATGACGAGCTTGGCCCTTATCCCGTGCCTGCATCTTACGTCGGATTGGAAGAAAACAGCGACATTTACAAATACATAAACTCAACAAGGAACGCAACTGCAACTATTTGGAAAAGTGAAGAGATTAGTGATGTATTGGCTCCATATGTGCCCTCCTACTCATCGAGGGGCCCAAATCCGGTCAATCCCAACATTCTCAAGCCAGATTTAGCAGCTCCAGGAACTTACATTCTGGCAGCATATCCCCCAAGTGGTGGTGGCAGTAGAGCTAGATACTATATAGAAACCGGGACATCAATGGCATGCCCCCATGCTACGGCCGTAGCTGCATACGTCAAATCATTTCACCCTAAATGGTCACCGGCTGCTATCCAATCGACTCTTATCACTACTGCTATACCTATGAGTGCCAAAACTAGCCCTGACGCTGAATTTGCATACGGAGCTGGCCTAATAAACCCTTCTACGGCGCCATATCCTGGTTTGGTGTACAATCTTGATGAACAAGACTACATAGATTTTTTGTGTTCACAAGGATACAGTGGTAAACTATTGCAAACCATAACTAGGGACAAGACTAGTTGCTCATCAAAATCTATTAATGGAACAACTAATGACATGAACTATCCTTCTTTTGCACTTTCCATCAAGGATCTGAAATTTGTCAATGGGGTCTTCCATAGGACTGTCACTAATGTTGGATCGTCAAAATCCACATATAGAGCTAAAGTGGTGGCTCCATTGGGACTCAAAATCGATGTGAGTCCAAGTGTGCTATCGTTCACATCTCTCGGGCAAAAGAAATCTTTTGTTGTCACTATAAAAGGGTCGATTGAGAAATCAAATCTAGTCTCTGCATCTTTGGTGTGGGATGATGGTGCTTTCCAAGTCAGGAGCCCCATGGTTGTCTATGTTGTTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00010 ko00680 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko03018 ko04066 map00010 map00680 map01100 map01110 map01120 map01130 map01200 map01230 map03018 map04066

Pfam Domains

Protein Families

Enolase_C Enolase_N

Protein Analysis

728

Amino Acids

77.93

Weight (kDa)

6.86

Isoelectric Point (pI)

37.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	33 - 111	4.3e-13	Peptidase inhibitor I9
Peptidase_S8	PF00082	134 - 571	7.1e-43	Subtilase family
fn3_6	PF17766	627 - 724	2.4e-27	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002577)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36530 AT2G36530
fragaria_vesca	FvH4_6g17770 FvH4_6g17770 FvH4_7g28150
malus_domestica	MD01G1185500.v1.1 MD12G1016600.v1.1 MD14G1014600.v1.1
prunus_persica	Prupe.2G281900_v2.0.a1 Prupe.2G281900_v2.0.a1 Prupe.7G118700_v2.0.a1
pyrus_communis	pycom01g19710 pycom12g01360 pycom14g01220
rosa_chinensis	RchiOBHm_Chr1g0375091 RchiOBHm_Chr3g0472001
rosa_laevigata	RLG00000000873 RLG00000024113
rosa_multiflora	Rmu_sc0000090.1_g000028 Rmu_sc0000554.1_g000017 Rmu_sc0002532.1_g000001 Rmu_sc0034562.1_g000001 Rmu_sc0039689.1_g000001
rosa_roxburghii	Rroxscaffold_4G00283020 Rroxscaffold_6G00409370
rosa_rugosa	Rorug01G0388300 Rorug01G0388400 Rorug03G0121500 Rorug03G0121600
rosa_samantha	Rh1AG398800 Rh1BG365700 Rh1CG378600 Rh1DG396400 Rh3AG173200 Rh3BG198600 Rh3CG189800 Rh3CG197100 Rh3DG175800
rosa_wichuraiana	Rw1G035410 Rw3G016750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1091
Acc36I	ACCTGC	1 cut(s)	1091
Acc65I	GGTACC	1 cut(s)	703
AccB1I	GGYRCC	2 cut(s)	703, 1732
AccB7I	CCANNNNNTGG	3 cut(s)	489, 1517, 1742
AccI	GTMKAC	1 cut(s)	810
AciI	CCGC	4 cut(s)	609, 779, 921, 1003
AclWI	GGATC	4 cut(s)	564, 857, 1923, 1972
AcoI	YGGCCR	3 cut(s)	437, 918, 1581
AcsI	RAATTY	4 cut(s)	432, 958, 1694, 1922
AcyI	GRCGYC	1 cut(s)	1733
AfaI	GTAC	3 cut(s)	705, 728, 1754
AgsI	TTSAA	4 cut(s)	241, 398, 859, 1025
AhlI	ACTAGT	1 cut(s)	1841
AjnI	CCWGG	3 cut(s)	1121, 1480, 1741
Alw21I	GWGCWC	1 cut(s)	550
Alw26I	GTCTC	3 cut(s)	594, 597, 2119
AlwI	GGATC	4 cut(s)	564, 857, 1923, 1972
AlwNI	CAGNNNCTG	1 cut(s)	641
Ama87I	CYCGRG	1 cut(s)	2054
ApaI	GGGCCC	2 cut(s)	135, 1436
ApoI	RAATTY	4 cut(s)	432, 958, 1694, 1922
ArsI	GACNNNNNNTTYG	2 cut(s)	1679, 1711
AseI	ATTAAT	1 cut(s)	1863
Asp718I	GGTACC	1 cut(s)	703
AspLEI	GCGC	3 cut(s)	335, 392, 1735
AspS9I	GGNCC	9 cut(s)	131, 132, 473, 935, 1187, 1212, 1277, 1432, 1433
AsuC2I	CCSGG	2 cut(s)	1079, 1552
AsuHPI	GGTGA	3 cut(s)	1006, 1601, 1614
AsuII	TTCGAA	1 cut(s)	576
AvaI	CYCGRG	1 cut(s)	2054
AvaII	GGWCC	2 cut(s)	473, 935
BaeGI	GKGCMC	3 cut(s)	135, 1416, 1436
BaeI	ACNNNNGTAYC	2 cut(s)	1792, 1825
BalI	TGGCCA	1 cut(s)	439
BanI	GGYRCC	2 cut(s)	703, 1732
BanII	GRGCYC	3 cut(s)	135, 1436, 2162
BbsI	GAAGAC	2 cut(s)	304, 1930
Bbv12I	GWGCWC	1 cut(s)	550
BceAI	ACGGC	3 cut(s)	1568, 1596, 1746
BciT130I	CCWGG	3 cut(s)	1123, 1482, 1743
BciVI	GTATCC	1 cut(s)	1793
BclI	TGATCA	2 cut(s)	145, 1158
BcnI	CCSGG	2 cut(s)	1079, 1552
BcoDI	GTCTC	3 cut(s)	594, 597, 2119
BcuI	ACTAGT	1 cut(s)	1841
BfaI	CTAG	6 cut(s)	776, 1533, 1680, 1830, 1842, 2111
BfmI	CTRYAG	1 cut(s)	164
BfoI	RGCGCY	3 cut(s)	336, 393, 1736
BfuAI	ACCTGC	1 cut(s)	1091
BfuI	GTATCC	1 cut(s)	1793
BglI	GCCNNNNNGGC	1 cut(s)	92
BglII	AGATCT	1 cut(s)	208
Bme1390I	CCNGG	5 cut(s)	1079, 1123, 1482, 1552, 1743
Bme18I	GGWCC	2 cut(s)	473, 935
BmeT110I	CYCGRG	1 cut(s)	2054
BmgT120I	GGNCC	9 cut(s)	131, 132, 473, 935, 1187, 1212, 1277, 1432, 1433
BmiI	GGNNCC	9 cut(s)	133, 705, 1213, 1404, 1433, 1434, 1734, 2001, 2159
BmrFI	CCNGG	5 cut(s)	1079, 1123, 1482, 1552, 1743
BmsI	GCATC	9 cut(s)	73, 451, 638, 754, 759, 781, 1129, 1304, 2129
BpiI	GAAGAC	2 cut(s)	304, 1930
BpmI	CTGGAG	2 cut(s)	1105, 1464
Bpu10I	CCTNAGC	1 cut(s)	78
Bpu14I	TTCGAA	1 cut(s)	576
BpuEI	CTTGAG	2 cut(s)	589, 1445
BpuMI	CCSGG	2 cut(s)	1079, 1552
Bsa29I	ATCGAT	2 cut(s)	1194, 2019
BsaAI	YACGTR	1 cut(s)	716
BsaHI	GRCGYC	1 cut(s)	1733
BsaJI	CCNNGG	6 cut(s)	511, 915, 938, 968, 1017, 2163
BsaWI	WCCGGW	1 cut(s)	1441
Bse118I	RCCGGY	1 cut(s)	1624
Bse1I	ACTGG	1 cut(s)	1006
Bse3DI	GCAATG	2 cut(s)	261, 795
BseBI	CCWGG	3 cut(s)	1123, 1482, 1743
BseCI	ATCGAT	2 cut(s)	1194, 2019
BseDI	CCNNGG	6 cut(s)	511, 915, 938, 968, 1017, 2163
BseGI	GGATG	3 cut(s)	88, 301, 2140
BseMI	GCAATG	2 cut(s)	261, 795
BseMII	CTCAG	2 cut(s)	84, 92
BseNI	ACTGG	1 cut(s)	1006
BseRI	GAGGAG	1 cut(s)	711
BseSI	GKGCMC	3 cut(s)	135, 1416, 1436
BseX3I	CGGCCG	1 cut(s)	1581
BseYI	CCCAGC	3 cut(s)	641, 738, 1202
BsgI	GTGCAG	1 cut(s)	1248
Bsh1285I	CGRYCG	1 cut(s)	1584
BshNI	GGYRCC	2 cut(s)	703, 1732
BshVI	ATCGAT	2 cut(s)	1194, 2019
BsiEI	CGRYCG	1 cut(s)	1584
BsiHKAI	GWGCWC	1 cut(s)	550
BsiHKCI	CYCGRG	1 cut(s)	2054
BsiSI	CCGG	4 cut(s)	1078, 1442, 1551, 1625
BslFI	GGGAC	6 cut(s)	1065, 1094, 1126, 1567, 1847, 2022
BsmAI	GTCTC	3 cut(s)	594, 597, 2119
BsmFI	GGGAC	6 cut(s)	1065, 1094, 1126, 1567, 1847, 2022
BsmI	GAATGC	1 cut(s)	782
BsoBI	CYCGRG	1 cut(s)	2054
Bsp119I	TTCGAA	1 cut(s)	576
Bsp120I	GGGCCC	2 cut(s)	131, 1432
Bsp1286I	GDGCHC	5 cut(s)	135, 550, 1416, 1436, 2162
Bsp1407I	TGTACA	2 cut(s)	726, 1752
Bsp143I	GATC	7 cut(s)	145, 208, 569, 862, 1158, 1915, 1964
Bsp19I	CCATGG	4 cut(s)	511, 915, 968, 2163
BspACI	CCGC	4 cut(s)	609, 779, 921, 1003
BspCNI	CTCAG	2 cut(s)	83, 91
BspDI	ATCGAT	2 cut(s)	1194, 2019
BspLI	GGNNCC	9 cut(s)	133, 705, 1213, 1404, 1433, 1434, 1734, 2001, 2159
BspMI	ACCTGC	1 cut(s)	1091
BspPI	GGATC	4 cut(s)	564, 857, 1923, 1972
BspQI	GCTCTTC	1 cut(s)	12
BspT104I	TTCGAA	1 cut(s)	576
BspT107I	GGYRCC	2 cut(s)	703, 1732
BsrDI	GCAATG	2 cut(s)	261, 795
BsrFI	RCCGGY	1 cut(s)	1624
BsrGI	TGTACA	2 cut(s)	726, 1752
BsrI	ACTGG	1 cut(s)	1006
BssAI	RCCGGY	1 cut(s)	1624
BssECI	CCNNGG	6 cut(s)	511, 915, 938, 968, 1017, 2163
BssMI	GATC	7 cut(s)	145, 208, 569, 862, 1158, 1915, 1964
BssNI	GRCGYC	1 cut(s)	1733
BssT1I	CCWWGG	5 cut(s)	511, 915, 968, 1017, 2163
Bst2UI	CCWGG	3 cut(s)	1123, 1482, 1743
Bst6I	CTCTTC	2 cut(s)	12, 1377
BstACI	GRCGYC	1 cut(s)	1733
BstAPI	GCANNNNNTGC	1 cut(s)	719
BstAUI	TGTACA	2 cut(s)	726, 1752
BstBAI	YACGTR	1 cut(s)	716
BstBI	TTCGAA	1 cut(s)	576
BstC8I	GCNNGC	4 cut(s)	664, 1293, 1567, 1711
BstDEI	CTNAG	3 cut(s)	70, 78, 1144
BstDSI	CCRYGG	4 cut(s)	511, 915, 968, 2163
BstEII	GGTNACC	1 cut(s)	1620
BstF5I	GGATG	3 cut(s)	88, 301, 2140
BstH2I	RGCGCY	3 cut(s)	336, 393, 1736
BstHHI	GCGC	3 cut(s)	335, 392, 1735
BstKTI	GATC	7 cut(s)	148, 211, 572, 865, 1161, 1918, 1967
BstMAI	GTCTC	3 cut(s)	594, 597, 2119
BstMBI	GATC	7 cut(s)	145, 208, 569, 862, 1158, 1915, 1964
BstMCI	CGRYCG	1 cut(s)	1584
BstNI	CCWGG	3 cut(s)	1123, 1482, 1743
BstNSI	RCATGY	1 cut(s)	1569
BstPI	GGTNACC	1 cut(s)	1620
BstSCI	CCNGG	5 cut(s)	1077, 1121, 1480, 1550, 1741
BstSFI	CTRYAG	1 cut(s)	164
BstSLI	GKGCMC	3 cut(s)	135, 1416, 1436
BstV2I	GAAGAC	2 cut(s)	304, 1930
BstX2I	RGATCY	2 cut(s)	208, 1915
BstYI	RGATCY	2 cut(s)	208, 1915
BstZI	CGGCCG	1 cut(s)	1581
Bsu15I	ATCGAT	2 cut(s)	1194, 2019
BsuI	GTATCC	1 cut(s)	1793
BsuTUI	ATCGAT	2 cut(s)	1194, 2019
BtgI	CCRYGG	4 cut(s)	511, 915, 968, 2163
BtsCI	GGATG	3 cut(s)	88, 301, 2140
BtsI	GCAGTG	1 cut(s)	624
BtsIMutI	CAGTG	4 cut(s)	624, 657, 811, 1810
BveI	ACCTGC	1 cut(s)	1091
Cac8I	GCNNGC	4 cut(s)	664, 1293, 1567, 1711
CaiI	CAGNNNCTG	1 cut(s)	641
CfoI	GCGC	3 cut(s)	335, 392, 1735
Cfr10I	RCCGGY	1 cut(s)	1624
Cfr13I	GGNCC	9 cut(s)	131, 132, 473, 935, 1187, 1212, 1277, 1432, 1433
ClaI	ATCGAT	2 cut(s)	1194, 2019
CseI	GACGC	2 cut(s)	1091, 1697
Csp6I	GTAC	3 cut(s)	704, 727, 1753
CviQI	GTAC	3 cut(s)	704, 727, 1753
DdeI	CTNAG	3 cut(s)	70, 78, 1144
DinI	GGCGCC	1 cut(s)	1734
DpnI	GATC	7 cut(s)	147, 210, 571, 864, 1160, 1917, 1966
DpnII	GATC	7 cut(s)	145, 208, 569, 862, 1158, 1915, 1964
EaeI	YGGCCR	3 cut(s)	437, 918, 1581
EagI	CGGCCG	1 cut(s)	1581
Eam1104I	CTCTTC	2 cut(s)	12, 1377
EarI	CTCTTC	2 cut(s)	12, 1377
EclXI	CGGCCG	1 cut(s)	1581
Eco130I	CCWWGG	5 cut(s)	511, 915, 968, 1017, 2163
Eco147I	AGGCCT	1 cut(s)	837
Eco24I	GRGCYC	3 cut(s)	135, 1436, 2162
Eco32I	GATATC	1 cut(s)	406
Eco47I	GGWCC	2 cut(s)	473, 935
Eco52I	CGGCCG	1 cut(s)	1581
Eco88I	CYCGRG	1 cut(s)	2054
Eco91I	GGTNACC	1 cut(s)	1620
EcoO109I	RGGNCCY	1 cut(s)	1432
EcoO65I	GGTNACC	1 cut(s)	1620
EcoRII	CCWGG	3 cut(s)	1121, 1480, 1741
EcoRV	GATATC	1 cut(s)	406
EcoT14I	CCWWGG	5 cut(s)	511, 915, 968, 1017, 2163
EcoT38I	GRGCYC	3 cut(s)	135, 1436, 2162
EgeI	GGCGCC	1 cut(s)	1734
EheI	GGCGCC	1 cut(s)	1734
ErhI	CCWWGG	5 cut(s)	511, 915, 968, 1017, 2163
FalI	AAGNNNNNCTT	2 cut(s)	198, 230
FaqI	GGGAC	6 cut(s)	1065, 1094, 1126, 1567, 1847, 2022
FauNDI	CATATG	1 cut(s)	1408
FbaI	TGATCA	2 cut(s)	145, 1158
FblI	GTMKAC	1 cut(s)	810
FokI	GGATG	3 cut(s)	95, 308, 2147
FriOI	GRGCYC	3 cut(s)	135, 1436, 2162
FspBI	CTAG	6 cut(s)	776, 1533, 1680, 1830, 1842, 2111
GlaI	GCGC	3 cut(s)	334, 391, 1734
GsaI	CCCAGC	3 cut(s)	645, 742, 1206
GsuI	CTGGAG	2 cut(s)	1105, 1464
HaeII	RGCGCY	3 cut(s)	336, 393, 1736
HapII	CCGG	4 cut(s)	1078, 1442, 1551, 1625
HgaI	GACGC	2 cut(s)	1091, 1697
HhaI	GCGC	3 cut(s)	335, 392, 1735
Hin1I	GRCGYC	1 cut(s)	1733
Hin6I	GCGC	3 cut(s)	333, 390, 1733
HinP1I	GCGC	3 cut(s)	333, 390, 1733
HincII	GTYRAC	2 cut(s)	178, 811
HindII	GTYRAC	2 cut(s)	178, 811
HinfI	GANTC	7 cut(s)	443, 590, 602, 1053, 1642, 2010, 2026
HpaII	CCGG	4 cut(s)	1078, 1442, 1551, 1625
HphI	GGTGA	3 cut(s)	1006, 1601, 1614
Hpy166II	GTNNAC	7 cut(s)	178, 811, 1040, 1753, 1793, 1811, 2046
Hpy188I	TCNGA	7 cut(s)	448, 545, 850, 939, 1245, 1307, 1920
Hpy188III	TCNNGA	5 cut(s)	80, 371, 567, 1760, 2155
Hpy8I	GTNNAC	7 cut(s)	178, 811, 1040, 1753, 1793, 1811, 2046
Hpy99I	CGWCG	1 cut(s)	1307
HpyAV	CCTTC	5 cut(s)	32, 583, 926, 1734, 1902
HpyCH4IV	ACGT	4 cut(s)	171, 715, 1302, 1596
HpyF3I	CTNAG	3 cut(s)	70, 78, 1144
HpySE526I	ACGT	4 cut(s)	171, 715, 1302, 1596
Hsp92I	GRCGYC	1 cut(s)	1733
HspAI	GCGC	3 cut(s)	333, 390, 1733
KasI	GGCGCC	1 cut(s)	1732
KpnI	GGTACC	1 cut(s)	707
Ksp22I	TGATCA	2 cut(s)	145, 1158
Kzo9I	GATC	7 cut(s)	145, 208, 569, 862, 1158, 1915, 1964
LguI	GCTCTTC	1 cut(s)	12
LmnI	GCTCC	7 cut(s)	330, 545, 1408, 1483, 1706, 2005, 2157
LweI	GCATC	9 cut(s)	73, 451, 638, 754, 759, 781, 1129, 1304, 2129
MaeI	CTAG	6 cut(s)	776, 1533, 1680, 1830, 1842, 2111
MaeII	ACGT	4 cut(s)	171, 715, 1302, 1596
MaeIII	GTNAC	8 cut(s)	61, 527, 926, 952, 1031, 1620, 1951, 2077
MalI	GATC	7 cut(s)	147, 210, 571, 864, 1160, 1917, 1966
MboI	GATC	7 cut(s)	145, 208, 569, 862, 1158, 1915, 1964
MfeI	CAATTG	2 cut(s)	873, 1025
MflI	RGATCY	2 cut(s)	208, 1915
MhlI	GDGCHC	5 cut(s)	135, 550, 1416, 1436, 2162
MlsI	TGGCCA	1 cut(s)	439
MluCI	AATT	8 cut(s)	432, 873, 958, 1025, 1170, 1236, 1694, 1922
MluNI	TGGCCA	1 cut(s)	439
Mly113I	GGCGCC	1 cut(s)	1733
MlyI	GAGTC	7 cut(s)	452, 596, 599, 1047, 1636, 2004, 2035
MmeI	TCCRAC	4 cut(s)	426, 811, 1285, 1942
Mox20I	TGGCCA	1 cut(s)	439
MscI	TGGCCA	1 cut(s)	439
MseI	TTAA	2 cut(s)	1863, 2185
Msp20I	TGGCCA	1 cut(s)	439
MspA1I	CMGCKG	4 cut(s)	74, 641, 756, 923
MspI	CCGG	4 cut(s)	1078, 1442, 1551, 1625
MspR9I	CCNGG	5 cut(s)	1079, 1123, 1482, 1552, 1743
MunI	CAATTG	2 cut(s)	873, 1025
Mva1269I	GAATGC	1 cut(s)	782
MvaI	CCWGG	3 cut(s)	1123, 1482, 1743
NarI	GGCGCC	1 cut(s)	1733
NciI	CCSGG	2 cut(s)	1079, 1552
NcoI	CCATGG	4 cut(s)	511, 915, 968, 2163
NdeI	CATATG	1 cut(s)	1408
NdeII	GATC	7 cut(s)	145, 208, 569, 862, 1158, 1915, 1964
NlaIV	GGNNCC	9 cut(s)	133, 705, 1213, 1404, 1433, 1434, 1734, 2001, 2159
NmuCI	GTSAC	4 cut(s)	952, 1620, 1951, 2077
NspI	RCATGY	1 cut(s)	1569
NspV	TTCGAA	1 cut(s)	576
PaeI	GCATGC	1 cut(s)	1569
PaqCI	CACCTGC	1 cut(s)	1091
PceI	AGGCCT	1 cut(s)	837
PciSI	GCTCTTC	1 cut(s)	12
PcsI	WCGNNNNNNNCGW	1 cut(s)	1266
PctI	GAATGC	1 cut(s)	782
PflFI	GACNNNGTC	1 cut(s)	806
PflMI	CCANNNNNTGG	3 cut(s)	489, 1517, 1742
PfoI	TCCNGGA	2 cut(s)	1077, 1480
PleI	GAGTC	7 cut(s)	451, 596, 598, 1047, 1636, 2004, 2034
PluTI	GGCGCC	1 cut(s)	1736
PpsI	GAGTC	7 cut(s)	451, 596, 598, 1047, 1636, 2004, 2034
Ppu21I	YACGTR	1 cut(s)	716
PshBI	ATTAAT	1 cut(s)	1863
Psp6I	CCWGG	3 cut(s)	1121, 1480, 1741
PspEI	GGTNACC	1 cut(s)	1620
PspFI	CCCAGC	3 cut(s)	641, 738, 1202
PspGI	CCWGG	3 cut(s)	1121, 1480, 1741
PspN4I	GGNNCC	9 cut(s)	133, 705, 1213, 1404, 1433, 1434, 1734, 2001, 2159
PspOMI	GGGCCC	2 cut(s)	131, 1432
PspPI	GGNCC	9 cut(s)	131, 132, 473, 935, 1187, 1212, 1277, 1432, 1433
PstNI	CAGNNNCTG	1 cut(s)	641
PsuI	RGATCY	2 cut(s)	208, 1915
PsyI	GACNNNGTC	1 cut(s)	806
PvuII	CAGCTG	3 cut(s)	74, 641, 756
RsaI	GTAC	3 cut(s)	705, 728, 1754
RsaNI	GTAC	3 cut(s)	704, 727, 1753
SalI	GTCGAC	1 cut(s)	809
SapI	GCTCTTC	1 cut(s)	12
SaqAI	TTAA	2 cut(s)	1863, 2185
Sau3AI	GATC	7 cut(s)	145, 208, 569, 862, 1158, 1915, 1964
Sau96I	GGNCC	9 cut(s)	131, 132, 473, 935, 1187, 1212, 1277, 1432, 1433
SchI	GAGTC	7 cut(s)	452, 596, 599, 1047, 1636, 2004, 2035
ScrFI	CCNGG	5 cut(s)	1079, 1123, 1482, 1552, 1743
SduI	GDGCHC	5 cut(s)	135, 550, 1416, 1436, 2162
SfaNI	GCATC	9 cut(s)	73, 451, 638, 754, 759, 781, 1129, 1304, 2129
SfcI	CTRYAG	1 cut(s)	164
SfoI	GGCGCC	1 cut(s)	1734
SfuI	TTCGAA	1 cut(s)	576
SinI	GGWCC	2 cut(s)	473, 935
SmlI	CTYRAG	2 cut(s)	604, 1460
SmoI	CTYRAG	2 cut(s)	604, 1460
SpeI	ACTAGT	1 cut(s)	1841
SphI	GCATGC	1 cut(s)	1569
Sse9I	AATT	8 cut(s)	432, 873, 958, 1025, 1170, 1236, 1694, 1922
SseBI	AGGCCT	1 cut(s)	837
SsiI	CCGC	4 cut(s)	609, 779, 921, 1003
SspDI	GGCGCC	1 cut(s)	1732
SspI	AATATT	1 cut(s)	43
SspMI	CTAG	6 cut(s)	776, 1533, 1680, 1830, 1842, 2111
StuI	AGGCCT	1 cut(s)	837
StyD4I	CCNGG	5 cut(s)	1077, 1121, 1480, 1550, 1741
StyI	CCWWGG	5 cut(s)	511, 915, 968, 1017, 2163
TaiI	ACGT	4 cut(s)	174, 718, 1305, 1599
TasI	AATT	8 cut(s)	432, 873, 958, 1025, 1170, 1236, 1694, 1922
TatI	WGTACW	2 cut(s)	726, 1752
TauI	GCSGC	2 cut(s)	782, 923
Tru1I	TTAA	2 cut(s)	1863, 2185
Tru9I	TTAA	2 cut(s)	1863, 2185
TscAI	CASTG	4 cut(s)	631, 657, 811, 1810
TseFI	GTSAC	4 cut(s)	952, 1620, 1951, 2077
Tsp45I	GTSAC	4 cut(s)	952, 1620, 1951, 2077
TspDTI	ATGAA	4 cut(s)	219, 1000, 1779, 1898
TspGWI	ACGGA	2 cut(s)	817, 1719
TspRI	CASTG	4 cut(s)	631, 657, 811, 1810
Tth111I	GACNNNGTC	1 cut(s)	806
Van91I	CCANNNNNTGG	3 cut(s)	489, 1517, 1742
VpaK11BI	GGWCC	2 cut(s)	473, 935
VspI	ATTAAT	1 cut(s)	1863
XapI	RAATTY	4 cut(s)	432, 958, 1694, 1922
XceI	RCATGY	1 cut(s)	1569
XcmI	CCANNNNNNNNNTGG	2 cut(s)	486, 1024
XmiI	GTMKAC	1 cut(s)	810
XspI	CTAG	6 cut(s)	776, 1533, 1680, 1830, 1842, 2111

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.