pycom14g01220

phosphopyruvate hydratase activity

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
871110 .. 874462
3353 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g01220.9

Sequence Viewer

Length: 1335 bp
ATGGCGACGATCCAGAGCGTCAAGGCTAGGCAGATCTTCGACAGCCGTGGCAATCCCACCGTCGAGGTCGATATCATTCTGTCAGATGGAACTTTGGCTAGAGCCGCTGTTCCAAGTGGTGCATCCACTGGAGTTTACGAGGCCCTTGAGTTGCGCGATGGAGGCAAAGACTACCTCGGAAAGGGTGTATCGAAGGCTGTCAACAATGTCAACACAATCATTGGCCCCGCTTTGATCGGCAAGGACCCAAGCGAACAGACTGCTATTGACAACTTCATGGTTCAACAGCTCGATGGAACTGTCAACGAGTGGGGTTGGTGCAAGCAAAAGCTTGGTGCAAATGCCATCTTGGCCGTGTCTCTTGCAGTCGCCAAGGCTGGTGCTAGCGTCAAGAAAGTTCCTCTCTACAAGCATATCGCCAATCTTGCTGGCAACAAGAACCTAGTGTTGCCCGTTCCTGCTTTCAATGTCATCAACGGTGGATCACATGCAGGAAACAAGCTTGCAATGCAGGAGTTCATGATTCTTCCTATTGGAGCTTCCTCATTCAAGGAAGCCATGAAGATGGGTGTGGAAGTATATCACAACCTTAAGTCTGTGATTAAAAAGAAGTACGGTCAGGATGCAACCAATGTTGGTGACGAAGGTGGATTTGCTCCTAACATCCAGGAGAACAAGGAAGGTCTTGAATTGCTCAAGACAGCCATCGAGAAGGCTGGATACACCGGCAAAGTTGTCATTGGAATGGATGTTGCTGCATCTGAGTTTTATGGATCAGATAAAACCTATGACCTGAACTTCAAGGAAGAGAAAAATGATGGTTCCCAAAAGATCTCAGGAAATGCTCTCAAGGACCTCTATAAGTCATTTGCAAGTGAGTACCCAATTGTTTCAATTGAAGATCCATTTGACCAAGATGACTGGGAGCACTATGCCAAGATGACAGCTGAAGTTGGAGAAAAAATACAAATTGTGGGAGATGATCTGTTGGTCACCAACCCCAAGAGGGTTGAGAAGGCAATCAAGGAGAAATCTTGCAATGCGCTTCTTCTCAAGGTGAATCAAATTGGATCAGTAACTGAGAGTATTGAGGCTGTAAGAATGTCCAAGAAAGCTGGATGGGGTGTGATGACCAGCCACCGCAGTGGAGAAACCGAGGACACCTTCATTGCTGATCTCGCTGTTGGTTTGGCTACGGGACAAATCAAGACAGGAGCTCCCTGCAGGTCAGAGCGTCTTGCCAAGTACAACCAGCTCTTGCGAATCGAGGAGGAGCTCGGTGCTGAGGCAGTGTATGCCGGAGCCAAGTTCCGCGTGCCCGTTGAGCCCTATTAG

Protein Analysis

445

Amino Acids

47.81

Weight (kDa)

5.92

Isoelectric Point (pI)

35.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1215
AccII CGCG 2 cut(s) 156, 1314
AciI CCGC 4 cut(s) 105, 228, 1141, 1312
AclWI GGATC 5 cut(s) 4, 490, 781, 896, 1078
AcoI YGGCCR 1 cut(s) 351
AcuI CTGAAG 1 cut(s) 969
AfaI GTAC 3 cut(s) 614, 881, 1247
AfiI CCNNNNNNNGG 2 cut(s) 181, 1006
AflII CTTAAG 1 cut(s) 590
AgsI TTSAA 7 cut(s) 284, 466, 550, 689, 802, 894, 899
AjnI CCWGG 1 cut(s) 666
AleI CACNNNNGTG 1 cut(s) 1143
AluBI AGCT 9 cut(s) 289, 331, 502, 539, 947, 1115, 1217, 1255, 1276
AluI AGCT 9 cut(s) 289, 331, 502, 539, 947, 1115, 1217, 1255, 1276
Alw21I GWGCWC 3 cut(s) 930, 1219, 1278
Alw26I GTCTC 1 cut(s) 363
AlwI GGATC 5 cut(s) 4, 490, 781, 896, 1078
AlwNI CAGNNNCTG 1 cut(s) 1079
AoxI GGCC 3 cut(s) 141, 223, 351
ApeKI GCWGC 1 cut(s) 755
AspLEI GCGC 2 cut(s) 156, 1045
AspS9I GGNCC 4 cut(s) 142, 224, 244, 853
AsuHPI GGTGA 3 cut(s) 650, 985, 1069
AsuNHI GCTAGC 1 cut(s) 383
AvaII GGWCC 2 cut(s) 244, 853
BaeGI GKGCMC 1 cut(s) 1320
BanII GRGCYC 3 cut(s) 1219, 1278, 1329
BarI GAAGNNNNNNTAC 2 cut(s) 704, 736
Bbv12I GWGCWC 3 cut(s) 930, 1219, 1278
BbvCI CCTCAGC 1 cut(s) 1284
BbvI GCAGC 1 cut(s) 742
BccI CCATC 8 cut(s) 80, 152, 287, 353, 559, 713, 812, 1113
BceAI ACGGC 2 cut(s) 30, 338
BcgI CGANNNNNNTGC 2 cut(s) 242, 276
BciT130I CCWGG 1 cut(s) 668
BciVI GTATCC 1 cut(s) 713
BcoDI GTCTC 1 cut(s) 363
BfaI CTAG 4 cut(s) 27, 99, 384, 443
BfmI CTRYAG 1 cut(s) 1222
BfrI CTTAAG 1 cut(s) 590
BfuAI ACCTGC 1 cut(s) 1215
BfuI GTATCC 1 cut(s) 713
BglI GCCNNNNNGGC 1 cut(s) 350
BglII AGATCT 2 cut(s) 33, 831
BisI GCNGC 2 cut(s) 105, 756
BlsI GCNGC 2 cut(s) 106, 757
Bme1390I CCNGG 1 cut(s) 668
Bme18I GGWCC 2 cut(s) 244, 853
BmgT120I GGNCC 4 cut(s) 142, 224, 244, 853
BmiI GGNNCC 4 cut(s) 226, 246, 823, 1303
BmrFI CCNGG 1 cut(s) 668
BmrI ACTGGG 1 cut(s) 931
BmsI GCATC 3 cut(s) 131, 613, 767
BmtI GCTAGC 1 cut(s) 387
BmuI ACTGGG 1 cut(s) 931
BpmI CTGGAG 1 cut(s) 150
Bpu10I CCTNAGC 1 cut(s) 1284
BpuEI CTTGAG 4 cut(s) 167, 680, 833, 1037
BsaJI CCNNGG 4 cut(s) 46, 175, 372, 1155
BsaXI ACNNNNNCTCC 2 cut(s) 1201, 1231
Bsc4I CCNNNNNNNGG 2 cut(s) 181, 1006
Bse118I RCCGGY 1 cut(s) 725
Bse1I ACTGG 2 cut(s) 133, 926
Bse3DI GCAATG 3 cut(s) 513, 1045, 1167
BseBI CCWGG 1 cut(s) 668
BseDI CCNNGG 4 cut(s) 46, 175, 372, 1155
BseGI GGATG 5 cut(s) 122, 628, 663, 754, 1124
BseLI CCNNNNNNNGG 2 cut(s) 181, 1006
BseMI GCAATG 3 cut(s) 513, 1045, 1167
BseMII CTCAG 4 cut(s) 753, 849, 1071, 1275
BseNI ACTGG 2 cut(s) 133, 926
BseRI GAGGAG 2 cut(s) 1283, 1286
BseSI GKGCMC 1 cut(s) 1320
BseXI GCAGC 1 cut(s) 742
Bsh1236I CGCG 2 cut(s) 156, 1314
BshFI GGCC 3 cut(s) 143, 225, 353
BsiHKAI GWGCWC 3 cut(s) 930, 1219, 1278
BsiSI CCGG 2 cut(s) 726, 1299
BslFI GGGAC 1 cut(s) 1212
BslI CCNNNNNNNGG 2 cut(s) 181, 1006
BsmAI GTCTC 1 cut(s) 363
BsmFI GGGAC 1 cut(s) 1212
BsnI GGCC 3 cut(s) 143, 225, 353
Bsp1286I GDGCHC 5 cut(s) 930, 1219, 1278, 1320, 1329
BspACI CCGC 4 cut(s) 105, 228, 1141, 1312
BspANI GGCC 3 cut(s) 143, 225, 353
BspCNI CTCAG 4 cut(s) 754, 848, 1072, 1276
BspFNI CGCG 2 cut(s) 156, 1314
BspHI TCATGA 1 cut(s) 519
BspLI GGNNCC 4 cut(s) 226, 246, 823, 1303
BspMAI CTGCAG 1 cut(s) 1226
BspMI ACCTGC 1 cut(s) 1215
BspOI GCTAGC 1 cut(s) 387
BspPI GGATC 5 cut(s) 4, 490, 781, 896, 1078
BspTI CTTAAG 1 cut(s) 590
BsrDI GCAATG 3 cut(s) 513, 1045, 1167
BsrFI RCCGGY 1 cut(s) 725
BsrI ACTGG 2 cut(s) 133, 926
BssAI RCCGGY 1 cut(s) 725
BssECI CCNNGG 4 cut(s) 46, 175, 372, 1155
BssT1I CCWWGG 1 cut(s) 372
Bst2UI CCWGG 1 cut(s) 668
Bst4CI ACNGT 4 cut(s) 61, 301, 479, 617
Bst6I CTCTTC 1 cut(s) 801
BstAFI CTTAAG 1 cut(s) 590
BstAPI GCANNNNNTGC 1 cut(s) 1295
BstC8I GCNNGC 5 cut(s) 323, 385, 430, 504, 1316
BstDEI CTNAG 4 cut(s) 762, 835, 1080, 1284
BstDSI CCRYGG 1 cut(s) 46
BstEII GGTNACC 1 cut(s) 991
BstENI CCTNNNNNAGG 1 cut(s) 179
BstF5I GGATG 5 cut(s) 122, 628, 663, 754, 1124
BstFNI CGCG 2 cut(s) 156, 1314
BstHHI GCGC 2 cut(s) 156, 1045
BstMAI GTCTC 1 cut(s) 363
BstMWI GCNNNNNNNGC 8 cut(s) 104, 162, 350, 425, 508, 1178, 1295, 1324
BstNI CCWGG 1 cut(s) 668
BstNSI RCATGY 1 cut(s) 491
BstPI GGTNACC 1 cut(s) 991
BstSCI CCNGG 1 cut(s) 666
BstSFI CTRYAG 1 cut(s) 1222
BstSLI GKGCMC 1 cut(s) 1320
BstUI CGCG 2 cut(s) 156, 1314
BstV1I GCAGC 1 cut(s) 742
BstX2I RGATCY 3 cut(s) 33, 831, 901
BstXI CCANNNNNNTGG 2 cut(s) 565, 1145
BstYI RGATCY 3 cut(s) 33, 831, 901
BsuI GTATCC 1 cut(s) 713
BsuRI GGCC 3 cut(s) 143, 225, 353
BtgI CCRYGG 1 cut(s) 46
BtgZI GCGATG 1 cut(s) 171
BtsCI GGATG 5 cut(s) 122, 628, 663, 754, 1124
BtsI GCAGTG 2 cut(s) 1150, 1296
BtsIMutI CAGTG 3 cut(s) 126, 1150, 1296
BveI ACCTGC 1 cut(s) 1215
Cac8I GCNNGC 5 cut(s) 323, 385, 430, 504, 1316
CaiI CAGNNNCTG 1 cut(s) 1079
CciI TCATGA 1 cut(s) 519
CfoI GCGC 2 cut(s) 156, 1045
Cfr10I RCCGGY 1 cut(s) 725
Cfr13I GGNCC 4 cut(s) 142, 224, 244, 853
CseI GACGC 3 cut(s) 7, 376, 1223
Csp6I GTAC 3 cut(s) 613, 880, 1246
CviAII CATG 4 cut(s) 277, 488, 520, 559
CviQI GTAC 3 cut(s) 613, 880, 1246
DdeI CTNAG 4 cut(s) 762, 835, 1080, 1284
EaeI YGGCCR 1 cut(s) 351
Eam1104I CTCTTC 1 cut(s) 801
EarI CTCTTC 1 cut(s) 801
Ecl136II GAGCTC 2 cut(s) 1217, 1276
Eco130I CCWWGG 1 cut(s) 372
Eco24I GRGCYC 3 cut(s) 1219, 1278, 1329
Eco32I GATATC 1 cut(s) 73
Eco47I GGWCC 2 cut(s) 244, 853
Eco53kI GAGCTC 2 cut(s) 1217, 1276
Eco57I CTGAAG 1 cut(s) 969
Eco91I GGTNACC 1 cut(s) 991
EcoICRI GAGCTC 2 cut(s) 1217, 1276
EcoNI CCTNNNNNAGG 1 cut(s) 179
EcoO109I RGGNCCY 3 cut(s) 142, 244, 853
EcoO65I GGTNACC 1 cut(s) 991
EcoRII CCWGG 1 cut(s) 666
EcoRV GATATC 1 cut(s) 73
EcoT14I CCWWGG 1 cut(s) 372
EcoT38I GRGCYC 3 cut(s) 1219, 1278, 1329
ErhI CCWWGG 1 cut(s) 372
FaeI CATG 4 cut(s) 280, 491, 523, 562
FaqI GGGAC 1 cut(s) 1212
FatI CATG 4 cut(s) 276, 487, 519, 558
FauI CCCGC 1 cut(s) 235
Fnu4HI GCNGC 2 cut(s) 105, 756
FokI GGATG 5 cut(s) 109, 635, 650, 761, 1131
FriOI GRGCYC 3 cut(s) 1219, 1278, 1329
Fsp4HI GCNGC 2 cut(s) 105, 756
FspBI CTAG 4 cut(s) 27, 99, 384, 443
GlaI GCGC 2 cut(s) 155, 1044
GluI GCNGC 2 cut(s) 105, 756
GsuI CTGGAG 1 cut(s) 150
HaeIII GGCC 3 cut(s) 143, 225, 353
HapII CCGG 2 cut(s) 726, 1299
HgaI GACGC 3 cut(s) 7, 376, 1223
HhaI GCGC 2 cut(s) 156, 1045
Hin1II CATG 4 cut(s) 280, 491, 523, 562
Hin6I GCGC 2 cut(s) 154, 1043
HinP1I GCGC 2 cut(s) 154, 1043
HincII GTYRAC 3 cut(s) 202, 211, 304
HindII GTYRAC 3 cut(s) 202, 211, 304
HindIII AAGCTT 2 cut(s) 329, 500
HinfI GANTC 3 cut(s) 523, 1060, 1263
HpaII CCGG 2 cut(s) 726, 1299
HphI GGTGA 3 cut(s) 650, 985, 1069
Hpy166II GTNNAC 4 cut(s) 136, 202, 211, 304
Hpy188I TCNGA 5 cut(s) 85, 179, 763, 778, 1231
Hpy188III TCNNGA 9 cut(s) 13, 391, 520, 620, 686, 697, 709, 837, 1207
Hpy8I GTNNAC 4 cut(s) 136, 202, 211, 304
Hpy99I CGWCG 2 cut(s) 10, 65
HpyAV CCTTC 6 cut(s) 187, 638, 674, 706, 1009, 1174
HpyCH4III ACNGT 4 cut(s) 61, 301, 479, 617
HpyF10VI GCNNNNNNNGC 8 cut(s) 104, 162, 350, 425, 508, 1178, 1295, 1324
HpyF3I CTNAG 4 cut(s) 762, 835, 1080, 1284
Hsp92II CATG 4 cut(s) 280, 491, 523, 562
HspAI GCGC 2 cut(s) 154, 1043
LmnI GCTCC 7 cut(s) 536, 661, 925, 1214, 1222, 1273, 1301
Lsp1109I GCAGC 1 cut(s) 742
LweI GCATC 3 cut(s) 131, 613, 767
MaeI CTAG 4 cut(s) 27, 99, 384, 443
MaeIII GTNAC 3 cut(s) 638, 991, 1075
MboII GAAGA 6 cut(s) 28, 518, 574, 818, 911, 1040
MfeI CAATTG 2 cut(s) 885, 894
MflI RGATCY 3 cut(s) 33, 831, 901
MhlI GDGCHC 5 cut(s) 930, 1219, 1278, 1320, 1329
MluCI AATT 5 cut(s) 689, 885, 894, 969, 1065
MmeI TCCRAC 1 cut(s) 934
MseI TTAA 2 cut(s) 591, 603
MslI CAYNNNNRTG 3 cut(s) 563, 743, 1143
MspA1I CMGCKG 2 cut(s) 107, 947
MspCI CTTAAG 1 cut(s) 590
MspI CCGG 2 cut(s) 726, 1299
MspR9I CCNGG 1 cut(s) 668
MunI CAATTG 2 cut(s) 885, 894
MvaI CCWGG 1 cut(s) 668
MvnI CGCG 2 cut(s) 156, 1314
MwoI GCNNNNNNNGC 8 cut(s) 104, 162, 350, 425, 508, 1178, 1295, 1324
NheI GCTAGC 1 cut(s) 383
NlaIII CATG 4 cut(s) 280, 491, 523, 562
NlaIV GGNNCC 4 cut(s) 226, 246, 823, 1303
NmuCI GTSAC 2 cut(s) 638, 991
NspI RCATGY 1 cut(s) 491
OliI CACNNNNGTG 1 cut(s) 1143
PagI TCATGA 1 cut(s) 519
PfeI GAWTC 3 cut(s) 523, 1060, 1263
PfoI TCCNGGA 1 cut(s) 666
PkrI GCNGC 2 cut(s) 106, 757
PpuMI RGGWCCY 2 cut(s) 244, 853
Psp124BI GAGCTC 2 cut(s) 1219, 1278
Psp5II RGGWCCY 2 cut(s) 244, 853
Psp6I CCWGG 1 cut(s) 666
PspEI GGTNACC 1 cut(s) 991
PspGI CCWGG 1 cut(s) 666
PspN4I GGNNCC 4 cut(s) 226, 246, 823, 1303
PspPI GGNCC 4 cut(s) 142, 224, 244, 853
PspPPI RGGWCCY 2 cut(s) 244, 853
PstI CTGCAG 1 cut(s) 1226
PstNI CAGNNNCTG 1 cut(s) 1079
PsuI RGATCY 3 cut(s) 33, 831, 901
PvuII CAGCTG 1 cut(s) 947
RsaI GTAC 3 cut(s) 614, 881, 1247
RsaNI GTAC 3 cut(s) 613, 880, 1246
RseI CAYNNNNRTG 3 cut(s) 563, 743, 1143
SacI GAGCTC 2 cut(s) 1219, 1278
SaqAI TTAA 2 cut(s) 591, 603
SatI GCNGC 2 cut(s) 105, 756
Sau96I GGNCC 4 cut(s) 142, 224, 244, 853
SbfI CCTGCAGG 1 cut(s) 1226
ScrFI CCNGG 1 cut(s) 668
SdaI CCTGCAGG 1 cut(s) 1226
SduI GDGCHC 5 cut(s) 930, 1219, 1278, 1320, 1329
SfaNI GCATC 3 cut(s) 131, 613, 767
SfcI CTRYAG 1 cut(s) 1222
SinI GGWCC 2 cut(s) 244, 853
SmiMI CAYNNNNRTG 3 cut(s) 563, 743, 1143
SmlI CTYRAG 5 cut(s) 146, 590, 695, 848, 1052
SmoI CTYRAG 5 cut(s) 146, 590, 695, 848, 1052
Sse8387I CCTGCAGG 1 cut(s) 1226
Sse9I AATT 5 cut(s) 689, 885, 894, 969, 1065
SsiI CCGC 4 cut(s) 105, 228, 1141, 1312
SspMI CTAG 4 cut(s) 27, 99, 384, 443
SstI GAGCTC 2 cut(s) 1219, 1278
StyD4I CCNGG 1 cut(s) 666
StyI CCWWGG 1 cut(s) 372
TaaI ACNGT 4 cut(s) 61, 301, 479, 617
TaqI TCGA 7 cut(s) 39, 63, 69, 191, 291, 708, 1266
TasI AATT 5 cut(s) 689, 885, 894, 969, 1065
TatI WGTACW 1 cut(s) 1245
TauI GCSGC 1 cut(s) 107
TfiI GAWTC 3 cut(s) 523, 1060, 1263
Tru1I TTAA 2 cut(s) 591, 603
Tru9I TTAA 2 cut(s) 591, 603
TscAI CASTG 3 cut(s) 133, 1150, 1296
TseFI GTSAC 2 cut(s) 638, 991
TseI GCWGC 1 cut(s) 755
Tsp45I GTSAC 2 cut(s) 638, 991
TspDTI ATGAA 4 cut(s) 265, 508, 575, 1156
TspRI CASTG 3 cut(s) 133, 1150, 1296
Vha464I CTTAAG 1 cut(s) 590
VpaK11BI GGWCC 2 cut(s) 244, 853
XagI CCTNNNNNAGG 1 cut(s) 179
XceI RCATGY 1 cut(s) 491
XspI CTAG 4 cut(s) 27, 99, 384, 443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.