MD14G1149700.v1.1

Glycosyltransferase family 29 (sialyltransferase)

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Forward (+)
24273636 .. 24277682
4047 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1149700.v1.1.491

Sequence Viewer

Length: 1314 bp
ATGAGGCTTTTGCAGTTGGCGTTCGTGGTTTCTGTTCTGTTCGGATTGGTCGCCATTCTCATCTACATCATCGGCGTCTCCGATCTCTATGAGACGCATCGACTTACGGAAGAAGATGAGGAGGCGCTGCATTCTTTGCGCACCGGTTTCCAGAAGTGTGTGGCTGCAAATGGATTAGGTTTGAAAGCCGCGCTCGGCAAAGATTACTGTCAAGTCACAATGCAGTTTCCTGCTGACACCATTCCTAAATGGAAGGATACCAAAACCGGTGAGCTTGAAGGATTATCATATGAGTTTAATCTTTGTGAGGCTGTGGCTACATGGGAACAGGTGCGGAATAGTACCACAATACTGACCAGGGAGTTCATTGATTCTTTACCAAATGGATGGGAGGATTATGCGTGGCGTAGGATTAACAAAGGAGATCGCCTCAACCGCTGTAAGAATAAAACATTATGTGTGGAAAAACTTTCACTGGTACTCCCTGAAACACCACCATATGTTCCACGGATGTTTCGCCGATGTGCTGTGATTGGAAACTCAGGAGATCTTTTGAAAACAAGGTTTGGGAAGGAGATTGATGGTTATGATGCAGTTATTAGAGAAAATGGTGCACCAATTCAGAACTACACTGATTATGTGGGGAAGAAATGCACATTTCGGCTTCTTAATAGGGGATCTGCTAAGGCTCTTGATAAAGTTGTGGAGTTAGATGAGTCAAGAAAGGAAGTATTGATCATCAAAACAACAATTCACGATGCTATGAACCAGATGATTCGGGAAATTCCAATAAAAAATCATGTGTATCTCCTGCTAGGTGCATCCTTTGGTTCTGCCGCAAAAGGAACCGGGCTCAAGGCTCTTGAATTTGGGCTCTCTATATGTGACTCAGTAGATATGTATGGTTTCACTGTAGATCCAGGATATAAAGAATGGACTAGATATTTCTCAGAAGCTCGACAAGGCCATACTCCTCTACATGGTAGGGCATACTACCAGATGATGGAGTGTTTGGGTCTTATCAAAATTCATTCGCCTCTTCGAGCTGATCCAAACCGTGTTGTGCAATGGGTACCAGAACGAAGTTTAGTTACTGCTGCTAGAATTGCATCAGAGAAATTGTTGAGGAGAGTTGGAGCAGGGTATGTAGATCCGCTGCGTATGTGCTCAATTGTAAAGAAGCAAATCAAACTAAAGCTTACATCATTTCTAAGTCTAAGAAGGGCCGCTATAGACCATCAGAAATATGTGAAAAGTGCAACCATGTACCCTCTGGAGCGTAGTCCTCGGCATGGTATGCTTTGCACTGTGTGA

Protein Analysis

438

Amino Acids

49.48

Weight (kDa)

9.18

Isoelectric Point (pI)

28.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_29 PF00777 161 - 260 1e-19 Glycosyltransferase family 29 (sialyltransferase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 140
Acc65I GGTACC 1 cut(s) 1072
AccB1I GGYRCC 1 cut(s) 1072
AccB7I CCANNNNNTGG 1 cut(s) 1003
AccII CGCG 1 cut(s) 191
AciI CCGC 6 cut(s) 189, 334, 436, 837, 1154, 1227
AclWI GGATC 4 cut(s) 685, 911, 1043, 1145
AcsI RAATTY 3 cut(s) 783, 866, 1026
AcyI GRCGYC 1 cut(s) 75
AdeI CACNNNGTG 1 cut(s) 1311
AfaI GTAC 4 cut(s) 343, 480, 1074, 1268
AfiI CCNNNNNNNGG 3 cut(s) 980, 1003, 1292
AgeI ACCGGT 2 cut(s) 143, 266
AgsI TTSAA 4 cut(s) 184, 278, 556, 866
AjnI CCWGG 2 cut(s) 356, 919
AluBI AGCT 4 cut(s) 274, 956, 1046, 1198
AluI AGCT 4 cut(s) 274, 956, 1046, 1198
Alw21I GWGCWC 2 cut(s) 616, 1169
Alw26I GTCTC 2 cut(s) 82, 86
Alw44I GTGCAC 1 cut(s) 612
AlwI GGATC 4 cut(s) 685, 911, 1043, 1145
AoxI GGCC 2 cut(s) 964, 1224
ApaLI GTGCAC 1 cut(s) 612
ApeKI GCWGC 4 cut(s) 127, 164, 1097, 1156
ApoI RAATTY 3 cut(s) 783, 866, 1026
AsiGI ACCGGT 2 cut(s) 143, 266
Asp718I GGTACC 1 cut(s) 1072
AspLEI GCGC 3 cut(s) 127, 141, 193
AspS9I GGNCC 1 cut(s) 1224
AsuC2I CCSGG 1 cut(s) 850
AsuHPI GGTGA 1 cut(s) 281
BaeGI GKGCMC 1 cut(s) 616
BanI GGYRCC 1 cut(s) 1072
BanII GRGCYC 2 cut(s) 855, 876
BarI GAAGNNNNNNTAC 2 cut(s) 1075, 1107
Bbv12I GWGCWC 2 cut(s) 616, 1169
BbvI GCAGC 4 cut(s) 114, 151, 1084, 1143
BccI CCATC 4 cut(s) 381, 575, 997, 1245
BciT130I CCWGG 2 cut(s) 358, 921
BciVI GTATCC 1 cut(s) 250
BclI TGATCA 1 cut(s) 735
BcnI CCSGG 1 cut(s) 850
BcoDI GTCTC 2 cut(s) 82, 86
BfaI CTAG 3 cut(s) 815, 939, 1101
BfmI CTRYAG 2 cut(s) 912, 1230
BfoI RGCGCY 1 cut(s) 128
BfuI GTATCC 1 cut(s) 250
BglII AGATCT 1 cut(s) 547
BisI GCNGC 7 cut(s) 128, 165, 189, 837, 1098, 1157, 1227
BlsI GCNGC 7 cut(s) 129, 166, 190, 838, 1099, 1158, 1228
Bme1390I CCNGG 3 cut(s) 358, 850, 921
BmgT120I GGNCC 1 cut(s) 1224
BmiI GGNNCC 2 cut(s) 847, 1074
BmrFI CCNGG 3 cut(s) 358, 850, 921
BmsI GCATC 5 cut(s) 106, 580, 748, 830, 1118
BplI GAGNNNNNCTC 2 cut(s) 414, 446
BpmI CTGGAG 1 cut(s) 1295
Bpu10I CCTNAGC 1 cut(s) 684
BpuEI CTTGAG 1 cut(s) 839
BpuMI CCSGG 1 cut(s) 850
BsaHI GRCGYC 1 cut(s) 75
BsaJI CCNNGG 3 cut(s) 357, 506, 1286
BsaWI WCCGGW 2 cut(s) 143, 266
BsaXI ACNNNNNCTCC 2 cut(s) 465, 495
Bsc4I CCNNNNNNNGG 3 cut(s) 980, 1003, 1292
Bse118I RCCGGY 2 cut(s) 143, 266
Bse1I ACTGG 1 cut(s) 480
Bse3DI GCAATG 1 cut(s) 1073
BseBI CCWGG 2 cut(s) 358, 921
BseDI CCNNGG 3 cut(s) 357, 506, 1286
BseGI GGATG 3 cut(s) 392, 516, 821
BseLI CCNNNNNNNGG 3 cut(s) 980, 1003, 1292
BseMI GCAATG 1 cut(s) 1073
BseMII CTCAG 3 cut(s) 555, 903, 963
BseNI ACTGG 1 cut(s) 480
BseRI GAGGAG 3 cut(s) 134, 963, 1141
BseSI GKGCMC 1 cut(s) 616
BseXI GCAGC 4 cut(s) 114, 151, 1084, 1143
Bsh1236I CGCG 1 cut(s) 191
BshFI GGCC 2 cut(s) 966, 1226
BshNI GGYRCC 1 cut(s) 1072
BshTI ACCGGT 2 cut(s) 143, 266
BsiHKAI GWGCWC 2 cut(s) 616, 1169
BsiSI CCGG 3 cut(s) 144, 267, 849
BslI CCNNNNNNNGG 3 cut(s) 980, 1003, 1292
BsmAI GTCTC 2 cut(s) 82, 86
BsmBI CGTCTC 2 cut(s) 82, 86
BsmI GAATGC 1 cut(s) 130
BsnI GGCC 2 cut(s) 966, 1226
Bsp1286I GDGCHC 4 cut(s) 616, 855, 876, 1169
Bsp143I GATC 8 cut(s) 82, 424, 547, 677, 735, 916, 1048, 1150
BspACI CCGC 6 cut(s) 189, 334, 436, 837, 1154, 1227
BspANI GGCC 2 cut(s) 966, 1226
BspCNI CTCAG 3 cut(s) 554, 902, 962
BspFNI CGCG 1 cut(s) 191
BspLI GGNNCC 2 cut(s) 847, 1074
BspPI GGATC 4 cut(s) 685, 911, 1043, 1145
BspT107I GGYRCC 1 cut(s) 1072
BsrDI GCAATG 1 cut(s) 1073
BsrFI RCCGGY 2 cut(s) 143, 266
BsrI ACTGG 1 cut(s) 480
BssAI RCCGGY 2 cut(s) 143, 266
BssECI CCNNGG 3 cut(s) 357, 506, 1286
BssMI GATC 8 cut(s) 82, 424, 547, 677, 735, 916, 1048, 1150
BssNI GRCGYC 1 cut(s) 75
Bst2UI CCWGG 2 cut(s) 358, 921
Bst4CI ACNGT 4 cut(s) 209, 913, 1058, 1309
Bst6I CTCTTC 1 cut(s) 1044
BstACI GRCGYC 1 cut(s) 75
BstAPI GCANNNNNTGC 2 cut(s) 136, 1297
BstDEI CTNAG 6 cut(s) 541, 684, 889, 949, 1211, 1217
BstDSI CCRYGG 1 cut(s) 506
BstF5I GGATG 3 cut(s) 392, 516, 821
BstFNI CGCG 1 cut(s) 191
BstH2I RGCGCY 1 cut(s) 128
BstHHI GCGC 3 cut(s) 127, 141, 193
BstKTI GATC 8 cut(s) 85, 427, 550, 680, 738, 919, 1051, 1153
BstMAI GTCTC 2 cut(s) 82, 86
BstMBI GATC 8 cut(s) 82, 424, 547, 677, 735, 916, 1048, 1150
BstMWI GCNNNNNNNGC 4 cut(s) 136, 435, 1106, 1297
BstNI CCWGG 2 cut(s) 358, 921
BstSCI CCNGG 3 cut(s) 356, 848, 919
BstSFI CTRYAG 2 cut(s) 912, 1230
BstSLI GKGCMC 1 cut(s) 616
BstUI CGCG 1 cut(s) 191
BstV1I GCAGC 4 cut(s) 114, 151, 1084, 1143
BstX2I RGATCY 4 cut(s) 547, 677, 916, 1150
BstXI CCANNNNNNTGG 1 cut(s) 387
BstYI RGATCY 4 cut(s) 547, 677, 916, 1150
BsuI GTATCC 1 cut(s) 250
BsuRI GGCC 2 cut(s) 966, 1226
BtgI CCRYGG 1 cut(s) 506
BtsCI GGATG 3 cut(s) 392, 516, 821
BtsIMutI CAGTG 4 cut(s) 473, 630, 909, 1305
CfoI GCGC 3 cut(s) 127, 141, 193
Cfr10I RCCGGY 2 cut(s) 143, 266
Cfr13I GGNCC 1 cut(s) 1224
CseI GACGC 2 cut(s) 64, 103
Csp6I GTAC 4 cut(s) 342, 479, 1073, 1267
CspAI ACCGGT 2 cut(s) 143, 266
CviAII CATG 5 cut(s) 321, 800, 980, 1264, 1292
CviQI GTAC 4 cut(s) 342, 479, 1073, 1267
DdeI CTNAG 6 cut(s) 541, 684, 889, 949, 1211, 1217
DpnI GATC 8 cut(s) 84, 426, 549, 679, 737, 918, 1050, 1152
DpnII GATC 8 cut(s) 82, 424, 547, 677, 735, 916, 1048, 1150
DraIII CACNNNGTG 1 cut(s) 1311
Eam1104I CTCTTC 1 cut(s) 1044
EarI CTCTTC 1 cut(s) 1044
Eco24I GRGCYC 2 cut(s) 855, 876
EcoRII CCWGG 2 cut(s) 356, 919
EcoT38I GRGCYC 2 cut(s) 855, 876
Esp3I CGTCTC 2 cut(s) 82, 86
FaeI CATG 5 cut(s) 324, 803, 983, 1267, 1295
FatI CATG 5 cut(s) 320, 799, 979, 1263, 1291
FauNDI CATATG 2 cut(s) 289, 499
FbaI TGATCA 1 cut(s) 735
Fnu4HI GCNGC 7 cut(s) 128, 165, 189, 837, 1098, 1157, 1227
FokI GGATG 3 cut(s) 399, 523, 808
FriOI GRGCYC 2 cut(s) 855, 876
Fsp4HI GCNGC 7 cut(s) 128, 165, 189, 837, 1098, 1157, 1227
FspBI CTAG 3 cut(s) 815, 939, 1101
FspI TGCGCA 1 cut(s) 140
GlaI GCGC 3 cut(s) 126, 140, 192
GluI GCNGC 7 cut(s) 128, 165, 189, 837, 1098, 1157, 1227
GsuI CTGGAG 1 cut(s) 1295
HaeII RGCGCY 1 cut(s) 128
HaeIII GGCC 2 cut(s) 966, 1226
HapII CCGG 3 cut(s) 144, 267, 849
HgaI GACGC 2 cut(s) 64, 103
HhaI GCGC 3 cut(s) 127, 141, 193
Hin1I GRCGYC 1 cut(s) 75
Hin1II CATG 5 cut(s) 324, 803, 983, 1267, 1295
Hin6I GCGC 3 cut(s) 125, 139, 191
HinP1I GCGC 3 cut(s) 125, 139, 191
HindIII AAGCTT 1 cut(s) 1196
HinfI GANTC 4 cut(s) 371, 716, 775, 887
HpaII CCGG 3 cut(s) 144, 267, 849
HphI GGTGA 1 cut(s) 281
Hpy166II GTNNAC 1 cut(s) 614
Hpy188I TCNGA 6 cut(s) 44, 82, 624, 952, 1114, 1242
Hpy188III TCNNGA 8 cut(s) 151, 543, 692, 720, 755, 779, 863, 1274
Hpy8I GTNNAC 1 cut(s) 614
HpyAV CCTTC 4 cut(s) 247, 272, 565, 1215
HpyCH4III ACNGT 4 cut(s) 209, 913, 1058, 1309
HpyF10VI GCNNNNNNNGC 4 cut(s) 136, 435, 1106, 1297
HpyF3I CTNAG 6 cut(s) 541, 684, 889, 949, 1211, 1217
Hsp92I GRCGYC 1 cut(s) 75
Hsp92II CATG 5 cut(s) 324, 803, 983, 1267, 1295
HspAI GCGC 3 cut(s) 125, 139, 191
KpnI GGTACC 1 cut(s) 1076
Ksp22I TGATCA 1 cut(s) 735
Kzo9I GATC 8 cut(s) 82, 424, 547, 677, 735, 916, 1048, 1150
LmnI GCTCC 2 cut(s) 1136, 1276
Lsp1109I GCAGC 4 cut(s) 114, 151, 1084, 1143
LweI GCATC 5 cut(s) 106, 580, 748, 830, 1118
MaeI CTAG 3 cut(s) 815, 939, 1101
MaeIII GTNAC 3 cut(s) 214, 884, 1090
MalI GATC 8 cut(s) 84, 426, 549, 679, 737, 918, 1050, 1152
MboI GATC 8 cut(s) 82, 424, 547, 677, 735, 916, 1048, 1150
MboII GAAGA 4 cut(s) 122, 125, 658, 1031
MfeI CAATTG 1 cut(s) 1170
MflI RGATCY 4 cut(s) 547, 677, 916, 1150
MhlI GDGCHC 4 cut(s) 616, 855, 876, 1169
MluCI AATT 8 cut(s) 618, 750, 783, 866, 1026, 1104, 1118, 1170
MlyI GAGTC 2 cut(s) 725, 881
MmeI TCCRAC 1 cut(s) 1114
MseI TTAA 3 cut(s) 297, 414, 669
MspA1I CMGCKG 2 cut(s) 438, 1156
MspI CCGG 3 cut(s) 144, 267, 849
MspR9I CCNGG 3 cut(s) 358, 850, 921
MunI CAATTG 1 cut(s) 1170
Mva1269I GAATGC 1 cut(s) 130
MvaI CCWGG 2 cut(s) 358, 921
MvnI CGCG 1 cut(s) 191
MwoI GCNNNNNNNGC 4 cut(s) 136, 435, 1106, 1297
NciI CCSGG 1 cut(s) 850
NdeI CATATG 2 cut(s) 289, 499
NdeII GATC 8 cut(s) 82, 424, 547, 677, 735, 916, 1048, 1150
NlaIII CATG 5 cut(s) 324, 803, 983, 1267, 1295
NlaIV GGNNCC 2 cut(s) 847, 1074
NmeAIII GCCGAG 2 cut(s) 174, 1267
NmuCI GTSAC 2 cut(s) 214, 884
NsbI TGCGCA 1 cut(s) 140
PcsI WCGNNNNNNNCGW 1 cut(s) 78
PctI GAATGC 1 cut(s) 130
PfeI GAWTC 2 cut(s) 371, 775
PflMI CCANNNNNTGG 1 cut(s) 1003
PfoI TCCNGGA 1 cut(s) 919
PinAI ACCGGT 2 cut(s) 143, 266
PkrI GCNGC 7 cut(s) 129, 166, 190, 838, 1099, 1158, 1228
PleI GAGTC 2 cut(s) 724, 881
PpsI GAGTC 2 cut(s) 724, 881
Psp6I CCWGG 2 cut(s) 356, 919
PspGI CCWGG 2 cut(s) 356, 919
PspN4I GGNNCC 2 cut(s) 847, 1074
PspPI GGNCC 1 cut(s) 1224
PsuI RGATCY 4 cut(s) 547, 677, 916, 1150
RsaI GTAC 4 cut(s) 343, 480, 1074, 1268
RsaNI GTAC 4 cut(s) 342, 479, 1073, 1267
SaqAI TTAA 3 cut(s) 297, 414, 669
SatI GCNGC 7 cut(s) 128, 165, 189, 837, 1098, 1157, 1227
Sau3AI GATC 8 cut(s) 82, 424, 547, 677, 735, 916, 1048, 1150
Sau96I GGNCC 1 cut(s) 1224
SchI GAGTC 2 cut(s) 725, 881
ScrFI CCNGG 3 cut(s) 358, 850, 921
SduI GDGCHC 4 cut(s) 616, 855, 876, 1169
SetI ASST 8 cut(s) 181, 276, 333, 566, 820, 958, 1048, 1200
SfaNI GCATC 5 cut(s) 106, 580, 748, 830, 1118
SfcI CTRYAG 2 cut(s) 912, 1230
SmlI CTYRAG 1 cut(s) 854
SmoI CTYRAG 1 cut(s) 854
Sse9I AATT 8 cut(s) 618, 750, 783, 866, 1026, 1104, 1118, 1170
SsiI CCGC 6 cut(s) 189, 334, 436, 837, 1154, 1227
SspMI CTAG 3 cut(s) 815, 939, 1101
StyD4I CCNGG 3 cut(s) 356, 848, 919
TaaI ACNGT 4 cut(s) 209, 913, 1058, 1309
TaqI TCGA 3 cut(s) 100, 958, 1042
TasI AATT 8 cut(s) 618, 750, 783, 866, 1026, 1104, 1118, 1170
TauI GCSGC 3 cut(s) 191, 839, 1229
TfiI GAWTC 2 cut(s) 371, 775
Tru1I TTAA 3 cut(s) 297, 414, 669
Tru9I TTAA 3 cut(s) 297, 414, 669
TscAI CASTG 4 cut(s) 480, 637, 916, 1312
TseFI GTSAC 2 cut(s) 214, 884
TseI GCWGC 4 cut(s) 127, 164, 1097, 1156
Tsp45I GTSAC 2 cut(s) 214, 884
TspDTI ATGAA 3 cut(s) 355, 779, 1019
TspGWI ACGGA 2 cut(s) 122, 523
TspRI CASTG 4 cut(s) 480, 637, 916, 1312
Van91I CCANNNNNTGG 1 cut(s) 1003
VneI GTGCAC 1 cut(s) 612
XapI RAATTY 3 cut(s) 783, 866, 1026
XcmI CCANNNNNNNNNTGG 1 cut(s) 1270
XspI CTAG 3 cut(s) 815, 939, 1101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.