pycom06g12490

Glycosyltransferase family 29 (sialyltransferase)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
17596048 .. 17599418
3371 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g12490.12

Sequence Viewer

Length: 1320 bp
ATGAGGCTTTTGCGGTTGGCGTTCGTGGTTTCTGTACTCTTCGGATTGGTCGCCATTCTCATCTACATCATCGGCGTCGCCGATCTCTATGAGACGCATCGGCTTACGGAAGAAGATGTGGAGGCGCTGCATTCTTTGCAGACCGGTTTCCAGAAGTGTGTGGCTGCAAATGGATTAGGTTTGCAAGCCACGCTCGGTAAAGATTACTGTCAAGTCATAATGCAGTTTCCTGCTGACACCATTCCTAAATGGAAAGATATTAAAACCGGTGAGCTTGAAGGCTTATCTTATGAGTTTGATCTTTGTGAGGCTGTGGCTACATGGGAACAGGTGCGGAATAGTACCACAATACTGACCAGGGAGTTCATTGACTCTTTACCAAATGGATGGGAGGATTATGCGTGGCGTAGGATTAACAAAGGAGATCGCCTCAACCGCTGTAAGAACAAGACATTATGCGTGGAAAAACTTTCACTGGTACTCCCTGCAACACCACCATATGTTCCACGGATGTTTCGCCGATGTGCTGTGATTGGAAACTCAGGAGATCTTTTGCAAACAAGGTTTGGAAAGGAGATTGATGGCTATGATGTTGTTATTAGAGAAAATGGTGCACCAATTCAGAACTACACTGAATACGTGGGGAAGAAATGCACATTTCGGCTTCTTAATAGGGGATCTGCTAAAGCTCTTGATAAAGTTGTGGAGTTAGACGAGTCAAGAAAGGAAGTATTGATCATCAAAACAACAATTCATGACGCCATGAACCAGATGATTCGGGAAATTCCAATAAAAAATCATGTTTATCTCCTGCTAGGTGCTTCCTTTGGTTCTGCCGCAAAAGGAACTGGGCTTAAGGCTCTTGAATTTGGGCTCTCTATATGTGACTCAGTAGATATGTATGGTTTCACTGTTCGGATCGATCCGGGATATAAAGAATGGACTAGATATTTCTCAGAAGCCCGACAAGGCCATACTCCTCTACATGGTAGGGCATACTACCAGATGATGGAGTGTTTGGGCCTTATCAAAATTCATTCGCCTATTCGAGCTGATCCAAACCGTGTTGTGCAATGGGTACCAGAACGAAGTTTAGTAACTGCTGCTAGAATTGCATCCGAGAAATTGTTGAGGAGGATTGGAGCAGGGTATGTAGATCCACTGCGTATGTGTTCAATTGTAAAGAAGCAAGTCAACCTAAAGCTGACATCATTTCTAAGTCTAAGAAAGGCCGCTATTGACCATCAGAAATATGTGAAAAGTGCAACCTTGTACCCTCTGGAGCGTAGTCCTCGGCATGGTATGCTTTGCACTGTGTGA

Protein Analysis

440

Amino Acids

49.69

Weight (kDa)

9.14

Isoelectric Point (pI)

28.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1078
AccB1I GGYRCC 1 cut(s) 1078
AccB7I CCANNNNNTGG 1 cut(s) 1009
AciI CCGC 5 cut(s) 13, 334, 436, 837, 1233
AclWI GGATC 5 cut(s) 685, 917, 926, 1049, 1151
AcsI RAATTY 3 cut(s) 783, 866, 1032
AcyI GRCGYC 2 cut(s) 75, 759
AdeI CACNNNGTG 1 cut(s) 1317
AfaI GTAC 5 cut(s) 36, 343, 480, 1080, 1274
AfiI CCNNNNNNNGG 3 cut(s) 986, 1009, 1298
AflII CTTAAG 1 cut(s) 854
AgeI ACCGGT 2 cut(s) 143, 266
AgsI TTSAA 3 cut(s) 278, 866, 1176
AjnI CCWGG 1 cut(s) 356
AluBI AGCT 4 cut(s) 274, 689, 1052, 1204
AluI AGCT 4 cut(s) 274, 689, 1052, 1204
Alw21I GWGCWC 1 cut(s) 616
Alw26I GTCTC 1 cut(s) 86
Alw44I GTGCAC 1 cut(s) 612
AlwI GGATC 5 cut(s) 685, 917, 926, 1049, 1151
AoxI GGCC 3 cut(s) 970, 1021, 1230
ApaLI GTGCAC 1 cut(s) 612
ApeKI GCWGC 3 cut(s) 127, 164, 1103
ApoI RAATTY 3 cut(s) 783, 866, 1032
AsiGI ACCGGT 2 cut(s) 143, 266
Asp718I GGTACC 1 cut(s) 1078
AspLEI GCGC 1 cut(s) 127
AspS9I GGNCC 1 cut(s) 1021
AsuC2I CCSGG 1 cut(s) 927
AsuHPI GGTGA 1 cut(s) 281
BaeGI GKGCMC 1 cut(s) 616
BanI GGYRCC 1 cut(s) 1078
BanII GRGCYC 1 cut(s) 876
Bbv12I GWGCWC 1 cut(s) 616
BbvI GCAGC 3 cut(s) 114, 151, 1090
BccI CCATC 4 cut(s) 381, 575, 1003, 1251
BciT130I CCWGG 1 cut(s) 358
BclI TGATCA 1 cut(s) 735
BcnI CCSGG 1 cut(s) 927
BcoDI GTCTC 1 cut(s) 86
BfaI CTAG 3 cut(s) 815, 945, 1107
BfoI RGCGCY 1 cut(s) 128
BfrI CTTAAG 1 cut(s) 854
BglII AGATCT 1 cut(s) 547
BisI GCNGC 5 cut(s) 128, 165, 837, 1104, 1233
BlsI GCNGC 5 cut(s) 129, 166, 838, 1105, 1234
Bme1390I CCNGG 2 cut(s) 358, 927
BmgT120I GGNCC 1 cut(s) 1021
BmiI GGNNCC 1 cut(s) 1080
BmrFI CCNGG 2 cut(s) 358, 927
BmrI ACTGGG 1 cut(s) 858
BmsI GCATC 2 cut(s) 106, 1124
BmuI ACTGGG 1 cut(s) 858
BplI GAGNNNNNCTC 2 cut(s) 414, 446
BpmI CTGGAG 1 cut(s) 1301
BpuMI CCSGG 1 cut(s) 927
Bsa29I ATCGAT 1 cut(s) 921
BsaAI YACGTR 1 cut(s) 640
BsaHI GRCGYC 2 cut(s) 75, 759
BsaJI CCNNGG 3 cut(s) 357, 506, 1292
BsaWI WCCGGW 2 cut(s) 143, 266
BsaXI ACNNNNNCTCC 2 cut(s) 465, 495
Bsc4I CCNNNNNNNGG 3 cut(s) 986, 1009, 1298
Bse118I RCCGGY 2 cut(s) 143, 266
Bse1I ACTGG 2 cut(s) 480, 853
Bse3DI GCAATG 1 cut(s) 1079
BseBI CCWGG 1 cut(s) 358
BseCI ATCGAT 1 cut(s) 921
BseDI CCNNGG 3 cut(s) 357, 506, 1292
BseGI GGATG 3 cut(s) 392, 516, 1115
BseLI CCNNNNNNNGG 3 cut(s) 986, 1009, 1298
BseMI GCAATG 1 cut(s) 1079
BseMII CTCAG 3 cut(s) 555, 903, 969
BseNI ACTGG 2 cut(s) 480, 853
BseRI GAGGAG 2 cut(s) 969, 1147
BseSI GKGCMC 1 cut(s) 616
BseXI GCAGC 3 cut(s) 114, 151, 1090
BshFI GGCC 3 cut(s) 972, 1023, 1232
BshNI GGYRCC 1 cut(s) 1078
BshTI ACCGGT 2 cut(s) 143, 266
BshVI ATCGAT 1 cut(s) 921
BsiHKAI GWGCWC 1 cut(s) 616
BsiSI CCGG 3 cut(s) 144, 267, 926
BslI CCNNNNNNNGG 3 cut(s) 986, 1009, 1298
BsmAI GTCTC 1 cut(s) 86
BsmBI CGTCTC 1 cut(s) 86
BsmI GAATGC 1 cut(s) 130
BsnI GGCC 3 cut(s) 972, 1023, 1232
Bsp1286I GDGCHC 2 cut(s) 616, 876
BspACI CCGC 5 cut(s) 13, 334, 436, 837, 1233
BspANI GGCC 3 cut(s) 972, 1023, 1232
BspCNI CTCAG 3 cut(s) 554, 902, 968
BspDI ATCGAT 1 cut(s) 921
BspHI TCATGA 1 cut(s) 754
BspLI GGNNCC 1 cut(s) 1080
BspPI GGATC 5 cut(s) 685, 917, 926, 1049, 1151
BspT107I GGYRCC 1 cut(s) 1078
BspTI CTTAAG 1 cut(s) 854
BsrDI GCAATG 1 cut(s) 1079
BsrFI RCCGGY 2 cut(s) 143, 266
BsrI ACTGG 2 cut(s) 480, 853
BssAI RCCGGY 2 cut(s) 143, 266
BssECI CCNNGG 3 cut(s) 357, 506, 1292
BssNI GRCGYC 2 cut(s) 75, 759
Bst2UI CCWGG 1 cut(s) 358
Bst4CI ACNGT 4 cut(s) 209, 913, 1064, 1315
Bst6I CTCTTC 1 cut(s) 44
BstACI GRCGYC 2 cut(s) 75, 759
BstAFI CTTAAG 1 cut(s) 854
BstAPI GCANNNNNTGC 2 cut(s) 136, 1303
BstBAI YACGTR 1 cut(s) 640
BstC8I GCNNGC 1 cut(s) 186
BstDEI CTNAG 5 cut(s) 541, 889, 955, 1217, 1223
BstDSI CCRYGG 1 cut(s) 506
BstF5I GGATG 3 cut(s) 392, 516, 1115
BstH2I RGCGCY 1 cut(s) 128
BstHHI GCGC 1 cut(s) 127
BstMAI GTCTC 1 cut(s) 86
BstMWI GCNNNNNNNGC 5 cut(s) 136, 190, 435, 1112, 1303
BstNI CCWGG 1 cut(s) 358
BstSCI CCNGG 2 cut(s) 356, 925
BstSLI GKGCMC 1 cut(s) 616
BstV1I GCAGC 3 cut(s) 114, 151, 1090
BstX2I RGATCY 3 cut(s) 547, 677, 1156
BstXI CCANNNNNNTGG 1 cut(s) 387
BstYI RGATCY 3 cut(s) 547, 677, 1156
Bsu15I ATCGAT 1 cut(s) 921
BsuRI GGCC 3 cut(s) 972, 1023, 1232
BsuTUI ATCGAT 1 cut(s) 921
BtgI CCRYGG 1 cut(s) 506
BtsCI GGATG 3 cut(s) 392, 516, 1115
BtsI GCAGTG 1 cut(s) 1160
BtsIMutI CAGTG 5 cut(s) 473, 630, 909, 1160, 1311
Cac8I GCNNGC 1 cut(s) 186
CciI TCATGA 1 cut(s) 754
CfoI GCGC 1 cut(s) 127
Cfr10I RCCGGY 2 cut(s) 143, 266
Cfr13I GGNCC 1 cut(s) 1021
ClaI ATCGAT 1 cut(s) 921
CseI GACGC 3 cut(s) 64, 103, 767
Csp6I GTAC 5 cut(s) 35, 342, 479, 1079, 1273
CspAI ACCGGT 2 cut(s) 143, 266
CviAII CATG 6 cut(s) 321, 755, 763, 800, 986, 1298
CviQI GTAC 5 cut(s) 35, 342, 479, 1079, 1273
DdeI CTNAG 5 cut(s) 541, 889, 955, 1217, 1223
DraIII CACNNNGTG 1 cut(s) 1317
Eam1104I CTCTTC 1 cut(s) 44
EarI CTCTTC 1 cut(s) 44
Eco24I GRGCYC 1 cut(s) 876
EcoRII CCWGG 1 cut(s) 356
EcoT38I GRGCYC 1 cut(s) 876
Esp3I CGTCTC 1 cut(s) 86
FaeI CATG 6 cut(s) 324, 758, 766, 803, 989, 1301
FatI CATG 6 cut(s) 320, 754, 762, 799, 985, 1297
FauNDI CATATG 1 cut(s) 499
FbaI TGATCA 1 cut(s) 735
Fnu4HI GCNGC 5 cut(s) 128, 165, 837, 1104, 1233
FokI GGATG 3 cut(s) 399, 523, 1102
FriOI GRGCYC 1 cut(s) 876
Fsp4HI GCNGC 5 cut(s) 128, 165, 837, 1104, 1233
FspBI CTAG 3 cut(s) 815, 945, 1107
GlaI GCGC 1 cut(s) 126
GluI GCNGC 5 cut(s) 128, 165, 837, 1104, 1233
GsuI CTGGAG 1 cut(s) 1301
HaeII RGCGCY 1 cut(s) 128
HaeIII GGCC 3 cut(s) 972, 1023, 1232
HapII CCGG 3 cut(s) 144, 267, 926
HgaI GACGC 3 cut(s) 64, 103, 767
HhaI GCGC 1 cut(s) 127
Hin1I GRCGYC 2 cut(s) 75, 759
Hin1II CATG 6 cut(s) 324, 758, 766, 803, 989, 1301
Hin6I GCGC 1 cut(s) 125
HinP1I GCGC 1 cut(s) 125
HincII GTYRAC 1 cut(s) 1195
HindII GTYRAC 1 cut(s) 1195
HinfI GANTC 4 cut(s) 371, 716, 775, 887
HpaII CCGG 3 cut(s) 144, 267, 926
HphI GGTGA 1 cut(s) 281
Hpy166II GTNNAC 2 cut(s) 614, 1195
Hpy188I TCNGA 6 cut(s) 44, 624, 918, 958, 1120, 1248
Hpy188III TCNNGA 8 cut(s) 151, 543, 692, 720, 755, 779, 863, 1280
Hpy8I GTNNAC 2 cut(s) 614, 1195
Hpy99I CGWCG 1 cut(s) 80
HpyAV CCTTC 1 cut(s) 272
HpyCH4III ACNGT 4 cut(s) 209, 913, 1064, 1315
HpyCH4IV ACGT 1 cut(s) 639
HpyF10VI GCNNNNNNNGC 5 cut(s) 136, 190, 435, 1112, 1303
HpyF3I CTNAG 5 cut(s) 541, 889, 955, 1217, 1223
HpySE526I ACGT 1 cut(s) 639
Hsp92I GRCGYC 2 cut(s) 75, 759
Hsp92II CATG 6 cut(s) 324, 758, 766, 803, 989, 1301
HspAI GCGC 1 cut(s) 125
KpnI GGTACC 1 cut(s) 1082
Ksp22I TGATCA 1 cut(s) 735
LmnI GCTCC 2 cut(s) 1142, 1282
Lsp1109I GCAGC 3 cut(s) 114, 151, 1090
LweI GCATC 2 cut(s) 106, 1124
MaeI CTAG 3 cut(s) 815, 945, 1107
MaeII ACGT 1 cut(s) 639
MaeIII GTNAC 2 cut(s) 884, 1096
MboII GAAGA 4 cut(s) 31, 122, 125, 658
MfeI CAATTG 1 cut(s) 1176
MflI RGATCY 3 cut(s) 547, 677, 1156
MhlI GDGCHC 2 cut(s) 616, 876
MluCI AATT 8 cut(s) 618, 750, 783, 866, 1032, 1110, 1124, 1176
MlyI GAGTC 3 cut(s) 365, 725, 881
MnlI CCTC 9 cut(s) 115, 301, 385, 440, 990, 1125, 1128, 1287, 1302
MseI TTAA 4 cut(s) 261, 414, 669, 855
MspA1I CMGCKG 1 cut(s) 438
MspCI CTTAAG 1 cut(s) 854
MspI CCGG 3 cut(s) 144, 267, 926
MspR9I CCNGG 2 cut(s) 358, 927
MunI CAATTG 1 cut(s) 1176
Mva1269I GAATGC 1 cut(s) 130
MvaI CCWGG 1 cut(s) 358
MwoI GCNNNNNNNGC 5 cut(s) 136, 190, 435, 1112, 1303
NciI CCSGG 1 cut(s) 927
NdeI CATATG 1 cut(s) 499
NlaIII CATG 6 cut(s) 324, 758, 766, 803, 989, 1301
NlaIV GGNNCC 1 cut(s) 1080
NmeAIII GCCGAG 1 cut(s) 1273
NmuCI GTSAC 1 cut(s) 884
PagI TCATGA 1 cut(s) 754
PcsI WCGNNNNNNNCGW 1 cut(s) 78
PctI GAATGC 1 cut(s) 130
PfeI GAWTC 1 cut(s) 775
PflMI CCANNNNNTGG 1 cut(s) 1009
PfoI TCCNGGA 1 cut(s) 925
PinAI ACCGGT 2 cut(s) 143, 266
PkrI GCNGC 5 cut(s) 129, 166, 838, 1105, 1234
PleI GAGTC 3 cut(s) 365, 724, 881
PpsI GAGTC 3 cut(s) 365, 724, 881
Ppu21I YACGTR 1 cut(s) 640
Psp6I CCWGG 1 cut(s) 356
PspGI CCWGG 1 cut(s) 356
PspN4I GGNNCC 1 cut(s) 1080
PspPI GGNCC 1 cut(s) 1021
PsuI RGATCY 3 cut(s) 547, 677, 1156
RsaI GTAC 5 cut(s) 36, 343, 480, 1080, 1274
RsaNI GTAC 5 cut(s) 35, 342, 479, 1079, 1273
SaqAI TTAA 4 cut(s) 261, 414, 669, 855
SatI GCNGC 5 cut(s) 128, 165, 837, 1104, 1233
Sau96I GGNCC 1 cut(s) 1021
SchI GAGTC 3 cut(s) 365, 725, 881
ScrFI CCNGG 2 cut(s) 358, 927
SduI GDGCHC 2 cut(s) 616, 876
SfaNI GCATC 2 cut(s) 106, 1124
SmlI CTYRAG 1 cut(s) 854
SmoI CTYRAG 1 cut(s) 854
Sse9I AATT 8 cut(s) 618, 750, 783, 866, 1032, 1110, 1124, 1176
SsiI CCGC 5 cut(s) 13, 334, 436, 837, 1233
SspMI CTAG 3 cut(s) 815, 945, 1107
StyD4I CCNGG 2 cut(s) 356, 925
TaaI ACNGT 4 cut(s) 209, 913, 1064, 1315
TaiI ACGT 1 cut(s) 642
TaqI TCGA 2 cut(s) 921, 1048
TasI AATT 8 cut(s) 618, 750, 783, 866, 1032, 1110, 1124, 1176
TatI WGTACW 1 cut(s) 34
TauI GCSGC 2 cut(s) 839, 1235
TfiI GAWTC 1 cut(s) 775
Tru1I TTAA 4 cut(s) 261, 414, 669, 855
Tru9I TTAA 4 cut(s) 261, 414, 669, 855
TscAI CASTG 5 cut(s) 480, 637, 916, 1167, 1318
TseFI GTSAC 1 cut(s) 884
TseI GCWGC 3 cut(s) 127, 164, 1103
Tsp45I GTSAC 1 cut(s) 884
TspDTI ATGAA 4 cut(s) 355, 743, 779, 1025
TspGWI ACGGA 2 cut(s) 122, 523
TspRI CASTG 5 cut(s) 480, 637, 916, 1167, 1318
Van91I CCANNNNNTGG 1 cut(s) 1009
Vha464I CTTAAG 1 cut(s) 854
VneI GTGCAC 1 cut(s) 612
XapI RAATTY 3 cut(s) 783, 866, 1032
XspI CTAG 3 cut(s) 815, 945, 1107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.