peroxisome organization
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD15G1369000.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0158691 RchiOBHm_Chr3g0461771 RchiOBHm_Chr3g0477511 RchiOBHm_Chr4g0391611 RchiOBHm_Chr5g0060841 RchiOBHm_Chr5g0074511 RchiOBHm_Chr5g0074521 RchiOBHm_Chr6g0248211 |
| rosa_laevigata | RLG00000001875 RLG00000032521 |
| rosa_multiflora | Rmu_sc0001803.1_g000035 Rmu_sc0002942.1_g000044 Rmu_sc0005455.1_g000008 Rmu_sc0006619.1_g000001 Rmu_sc0015767.1_g000001 Rmu_sc0034909.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00094060 Rroxscaffold_2G00116020 Rroxscaffold_3G00235080 Rroxscaffold_5G00358150 Rroxscaffold_5G00359750 |
| rosa_rugosa | Rorug05G0328100 Rorug05G0352400 Rorug07G0018800 Rorug07G0018900 |
| rosa_samantha | Rh2AG426900 Rh2BG244900 Rh2BG245000 Rh2BG415100 Rh3BG245300 Rh3CG117000 Rh3CG370200 Rh3CG370300 Rh4DG044300 Rh5DG334900 Rh5DG403500 Rh6CG125700 Rh7CG192300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 5 |
| AcsI | RAATTY | 1 cut(s) | 120 |
| AgsI | TTSAA | 1 cut(s) | 142 |
| AleI | CACNNNNGTG | 1 cut(s) | 11 |
| AluBI | AGCT | 1 cut(s) | 20 |
| AluI | AGCT | 1 cut(s) | 20 |
| Alw26I | GTCTC | 1 cut(s) | 110 |
| ApoI | RAATTY | 1 cut(s) | 120 |
| AspLEI | GCGC | 1 cut(s) | 6 |
| AsuHPI | GGTGA | 1 cut(s) | 98 |
| BanII | GRGCYC | 1 cut(s) | 82 |
| BccI | CCATC | 1 cut(s) | 169 |
| BciVI | GTATCC | 1 cut(s) | 193 |
| BcoDI | GTCTC | 1 cut(s) | 110 |
| BfuI | GTATCC | 1 cut(s) | 193 |
| BsmAI | GTCTC | 1 cut(s) | 110 |
| Bsp1286I | GDGCHC | 1 cut(s) | 82 |
| Bst4CI | ACNGT | 2 cut(s) | 48, 205 |
| Bst6I | CTCTTC | 1 cut(s) | 115 |
| BstHHI | GCGC | 1 cut(s) | 6 |
| BstMAI | GTCTC | 1 cut(s) | 110 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 17 |
| BsuI | GTATCC | 1 cut(s) | 193 |
| BtsI | GCAGTG | 1 cut(s) | 6 |
| BtsIMutI | CAGTG | 1 cut(s) | 6 |
| CfoI | GCGC | 1 cut(s) | 6 |
| CviAII | CATG | 1 cut(s) | 83 |
| CviJI | RGCY | 2 cut(s) | 20, 80 |
| CviKI_1 | RGCY | 2 cut(s) | 20, 80 |
| Eam1104I | CTCTTC | 1 cut(s) | 115 |
| EarI | CTCTTC | 1 cut(s) | 115 |
| Eco24I | GRGCYC | 1 cut(s) | 82 |
| EcoT38I | GRGCYC | 1 cut(s) | 82 |
| FaeI | CATG | 1 cut(s) | 86 |
| FaiI | YATR | 4 cut(s) | 84, 101, 137, 166 |
| FatI | CATG | 1 cut(s) | 82 |
| FriOI | GRGCYC | 1 cut(s) | 82 |
| FspAI | RTGCGCAY | 1 cut(s) | 5 |
| FspI | TGCGCA | 1 cut(s) | 5 |
| GlaI | GCGC | 1 cut(s) | 5 |
| HhaI | GCGC | 1 cut(s) | 6 |
| Hin1II | CATG | 1 cut(s) | 86 |
| Hin6I | GCGC | 1 cut(s) | 4 |
| HinP1I | GCGC | 1 cut(s) | 4 |
| HphI | GGTGA | 1 cut(s) | 98 |
| Hpy166II | GTNNAC | 2 cut(s) | 65, 155 |
| Hpy8I | GTNNAC | 2 cut(s) | 65, 155 |
| HpyCH4III | ACNGT | 2 cut(s) | 48, 205 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 17 |
| Hsp92II | CATG | 1 cut(s) | 86 |
| HspAI | GCGC | 1 cut(s) | 4 |
| LpnPI | CCDG | 1 cut(s) | 131 |
| MaeIII | GTNAC | 1 cut(s) | 86 |
| MboII | GAAGA | 1 cut(s) | 102 |
| MhlI | GDGCHC | 1 cut(s) | 82 |
| MluCI | AATT | 1 cut(s) | 120 |
| MnlI | CCTC | 3 cut(s) | 78, 168, 185 |
| MseI | TTAA | 1 cut(s) | 36 |
| MslI | CAYNNNNRTG | 1 cut(s) | 11 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 17 |
| NlaIII | CATG | 1 cut(s) | 86 |
| NmuCI | GTSAC | 1 cut(s) | 86 |
| NsbI | TGCGCA | 1 cut(s) | 5 |
| OliI | CACNNNNGTG | 1 cut(s) | 11 |
| RseI | CAYNNNNRTG | 1 cut(s) | 11 |
| SaqAI | TTAA | 1 cut(s) | 36 |
| SduI | GDGCHC | 1 cut(s) | 82 |
| SetI | ASST | 3 cut(s) | 22, 70, 160 |
| SgeI | CNNG | 5 cut(s) | 87, 95, 126, 158, 200 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 11 |
| Sse9I | AATT | 1 cut(s) | 120 |
| SspI | AATATT | 1 cut(s) | 210 |
| TaaI | ACNGT | 2 cut(s) | 48, 205 |
| TasI | AATT | 1 cut(s) | 120 |
| Tru1I | TTAA | 1 cut(s) | 36 |
| Tru9I | TTAA | 1 cut(s) | 36 |
| TscAI | CASTG | 1 cut(s) | 13 |
| TseFI | GTSAC | 1 cut(s) | 86 |
| Tsp45I | GTSAC | 1 cut(s) | 86 |
| TspGWI | ACGGA | 1 cut(s) | 204 |
| TspRI | CASTG | 1 cut(s) | 13 |
| XapI | RAATTY | 1 cut(s) | 120 |