Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0001176

Physical Location & Seq

Genomic Coordinates Reverse (-)

15207074 .. 15213001

Gene Structure 5928 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1157700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGTGTGACTCACCGTTTGTGCAAACTGCCTTGAGCCAAAGCGTTTCGTTTTGTAAATATTCGCATTCTAGCATCACTAGTAATTCGGAAATTCAGTCATTTTCTGCAAAAGAACTTCAGAGTGAGAGCTCATTTTCACAGGTGACCAATCCCGATGAAGGTATTGGAAGATTTGGGTCATGCTCTAAAGGTAGTGATACTTACCATTACAGATTCCAGCTTGAACAGGATGTACAAAGGTTGCAACTGCAGCTGCGGCAAGAAGTAGAACTGCATACTATCCTGGAAAATGCAATTGAGAAAAATGCTGTTAAATTTTCCAGCCCTTCATGCCTCCCTTACTATGCTCAAGAGCTCCTGAGCAATATTTCTGCGCTGGAGGTTACAGTTTCAAAACTTGAACAAGAGTTGGTTGCTTTGCAATTCCAACTTAGTCAAGAAAGAAATGAACGAAGGCTTGCTGAATATCGTCTGAGGCATCCATCTCCTCAGTCCATGTCTCCTCACTCCTCTGACATTATGAAACTAACGATTTCATCTTCTTTGAGGACTTCAGAGCACACCAATCGTAAATTACATCATTCCTCTGAAGATGACTCATATCAGGAGCCAAAGGATCAACAATTAACTGAGAATGCAGTGGACTCCATTGCAATTCACCATGATATGAAAATGTCTAGGAAGATGGATTCTGAATCTTTTCAACCTGCTGAGTTCGGGAAGCTTCCTAAAGGGATGCGCCCCAAGGGCCTCTGGGATCATCCAAACCAACTGTCAGAGGAGATGGTTAGATGTATGAAAAATATATTCATATCTTTGGCTGATTCAGCTACACCATCAAAATCTTCAGCACAAGAGAGCCAATGCTCGTCTATGTCTCCCCGTGGACATCTTTCCAATTCCTCTTGGTGGTCATCATCTGAACGGTCGATGATTTCATCATGGGTGCAGAGCCCACAGGTTGATATACAGAGTAACTCTGAAGTATTAGCTTCAGAGAATGCCTGTGATCCCTACAAAGTTCGAGGAAAACTGAGTTGGGCGGACATTGGGAACTATGGATTAGCGACTGAAGTTTCTTGGATGTCAGTTGGGAAGAAGCAATTAGAATATGCTGCAGGGGCCTTGAGGAGGTTCAGAGTACTTGTCGAGCAATTGGCAAAAGTAAACCCCATCCATCTGAGTTACAATGAGAAGCTAGCTTTCTGGATTAACTTGTACAATGCACTGATTATGCATGCTTACTTGGCTTATGGAGTCCCTAGAAGTGACTTGAAGCTCTTCTCTTTGATGCAAAAGGCAGCTTATACTGTTGGTGGTCATTCTTTCAGTGCAGCTGCTATTGAGTATGCAATTCTGAAGATGAAGCCACCACTCCATAGACCACAAATTGCTTTGCTTCTTGCCCTTCACAAGCTGAAGGTGTCAGATGAGCAACGGAAGTCTGCAATCGATACCTATGAACCACTTGCAACGTTTGCTTTGAGCTGTGGAATGTACTCTTCACCAGCGGTAAGAATGTACACTGCTAAAAATGTGAGGGAAGAGCTTCAGGAAGCCCAGCGTGATTTTGTTCGAGCTTCGGTTGGGGTTAGCAGCAGGGGGAGGTTGTTGGTGCCAAAAATGGTGCACTGCTTTGCCAAGGGCATTGTGGATGATTCAAATTTAGCTGTGTGGATATCACATTACCTTCAGCCCCACCAAGCTGCCTTTGTTGAACAATGCATATCACAGAGGCGACAAAAACTTCTTGGTTCACGTAACTGTGGGATTCTTCCATTTGATTCGCACTTCCGGTACCTCTTCCTGCCTGACAAAATTCCTTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF547 Lzipper-MIP1

Protein Analysis

610

Amino Acids

68.79

Weight (kDa)

8.34

Isoelectric Point (pI)

65.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lzipper-MIP1	PF14389	68 - 147	3.3e-21	Leucine-zipper of ternary complex factor MIP1
DUF547	PF04784	393 - 525	3.3e-40	Protein of unknown function, DUF547

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001176)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13000 AT3G13000 AT3G13000
fragaria_vesca	FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420
malus_domestica	MD09G1169500.v1.1 MD17G1157700.v1.1
prunus_persica	Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1
pyrus_communis	pycom09g08690 pycom17g15090
rosa_chinensis	RchiOBHm_Chr1g0315101 RchiOBHm_Chr1g0315561 RchiOBHm_Chr1g0322971 RchiOBHm_Chr2g0090201 RchiOBHm_Chr2g0148391 RchiOBHm_Chr5g0049331
rosa_laevigata	RLG00000002464 RLG00000019778 RLG00000020347 RLG00000020398 RLG00000030746
rosa_multiflora	Rmu_co8078922.1_g000001 Rmu_sc0007047.1_g000001 Rmu_sc0009059.1_g000004
rosa_roxburghii	Rroxscaffold_2G00098770
rosa_rugosa	Rorug01G0399600 Rorug02G0406300 Rorug02G0406400 Rorug02G0406500 Rorug02G0406600 Rorug02G0406700
rosa_samantha	Rh1AG015100 Rh1AG015300 Rh2AG465400 Rh2BG478300 Rh2CG451900 Rh2DG487100 Rh4AG101900 Rh4AG113600 Rh4CG175600
rosa_wichuraiana	Rw1G000760 Rw2G037930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	715
Acc65I	GGTACC	1 cut(s)	1797
AccB1I	GGYRCC	2 cut(s)	1615, 1797
AciI	CCGC	3 cut(s)	256, 1043, 1511
AclI	AACGTT	1 cut(s)	1475
AclWI	GGATC	3 cut(s)	624, 765, 1004
AcsI	RAATTY	4 cut(s)	90, 314, 1663, 1818
AfaI	GTAC	6 cut(s)	234, 1143, 1220, 1499, 1523, 1799
AfiI	CCNNNNNNNGG	3 cut(s)	158, 909, 1131
AgsI	TTSAA	7 cut(s)	224, 393, 401, 704, 1276, 1662, 1718
AhlI	ACTAGT	1 cut(s)	77
AjnI	CCWGG	1 cut(s)	282
AjuI	GAANNNNNNNTTGG	2 cut(s)	1021, 1053
Alw21I	GWGCWC	4 cut(s)	131, 357, 561, 1632
Alw26I	GTCTC	2 cut(s)	504, 882
Alw44I	GTGCAC	1 cut(s)	1628
AlwI	GGATC	3 cut(s)	624, 765, 1004
AoxI	GGCC	2 cut(s)	748, 1122
ApaLI	GTGCAC	1 cut(s)	1628
ApeKI	GCWGC	8 cut(s)	250, 253, 1115, 1301, 1334, 1337, 1596, 1706
ApoI	RAATTY	4 cut(s)	90, 314, 1663, 1818
ArsI	GACNNNNNNTTYG	3 cut(s)	31, 758, 790
Asp700I	GAANNNNTTC	3 cut(s)	699, 1280, 1548
Asp718I	GGTACC	1 cut(s)	1797
AspLEI	GCGC	2 cut(s)	376, 741
AspS9I	GGNCC	2 cut(s)	748, 1122
AsuHPI	GGTGA	4 cut(s)	3, 154, 650, 1497
AsuNHI	GCTAGC	1 cut(s)	1198
BaeGI	GKGCMC	1 cut(s)	1632
BanI	GGYRCC	2 cut(s)	1615, 1797
BanII	GRGCYC	3 cut(s)	131, 357, 956
Bbv12I	GWGCWC	4 cut(s)	131, 357, 561, 1632
BbvI	GCAGC	8 cut(s)	240, 262, 1102, 1313, 1324, 1346, 1608, 1693
BccI	CCATC	6 cut(s)	490, 679, 778, 844, 1181, 1185
BcgI	CGANNNNNNTGC	2 cut(s)	548, 582
BciT130I	CCWGG	1 cut(s)	284
BcoDI	GTCTC	2 cut(s)	504, 882
BcuI	ACTAGT	1 cut(s)	77
BfaI	CTAG	5 cut(s)	69, 78, 678, 1199, 1263
BfmI	CTRYAG	2 cut(s)	248, 1116
BfuAI	ACCTGC	1 cut(s)	715
BglI	GCCNNNNNGGC	1 cut(s)	747
BisI	GCNGC	9 cut(s)	251, 254, 257, 1116, 1302, 1335, 1338, 1597, 1707
BlsI	GCNGC	9 cut(s)	252, 255, 258, 1117, 1303, 1336, 1339, 1598, 1708
BmcAI	AGTACT	1 cut(s)	1143
Bme1390I	CCNGG	1 cut(s)	284
BmgT120I	GGNCC	2 cut(s)	748, 1122
BmiI	GGNNCC	4 cut(s)	609, 1123, 1617, 1799
BmrFI	CCNGG	1 cut(s)	284
BmsI	GCATC	4 cut(s)	81, 487, 726, 1281
BmtI	GCTAGC	1 cut(s)	1202
BpmI	CTGGAG	1 cut(s)	398
Bpu10I	CCTNAGC	1 cut(s)	359
BpuEI	CTTGAG	3 cut(s)	52, 333, 1147
Bsa29I	ATCGAT	1 cut(s)	1452
BsaAI	YACGTR	1 cut(s)	1760
BsaJI	CCNNGG	3 cut(s)	744, 883, 1641
BsaWI	WCCGGW	1 cut(s)	1794
Bsc4I	CCNNNNNNNGG	3 cut(s)	158, 909, 1131
Bse3DI	GCAATG	1 cut(s)	648
BseBI	CCWGG	1 cut(s)	284
BseCI	ATCGAT	1 cut(s)	1452
BseDI	CCNNGG	3 cut(s)	744, 883, 1641
BseGI	GGATG	7 cut(s)	235, 478, 741, 760, 1089, 1173, 1660
BseLI	CCNNNNNNNGG	3 cut(s)	158, 909, 1131
BseMI	GCAATG	1 cut(s)	648
BseMII	CTCAG	7 cut(s)	350, 464, 503, 621, 702, 1025, 1172
BseRI	GAGGAG	5 cut(s)	477, 492, 499, 794, 1144
BseSI	GKGCMC	1 cut(s)	1632
BseXI	GCAGC	8 cut(s)	240, 262, 1102, 1313, 1324, 1346, 1608, 1693
BseYI	CCCAGC	1 cut(s)	1560
BsgI	GTGCAG	2 cut(s)	968, 1353
Bsh1285I	CGRYCG	1 cut(s)	929
BshFI	GGCC	2 cut(s)	750, 1124
BshNI	GGYRCC	2 cut(s)	1615, 1797
BshVI	ATCGAT	1 cut(s)	1452
BsiEI	CGRYCG	1 cut(s)	929
BsiHKAI	GWGCWC	4 cut(s)	131, 357, 561, 1632
BsiSI	CCGG	1 cut(s)	1795
BslFI	GGGAC	1 cut(s)	1244
BslI	CCNNNNNNNGG	3 cut(s)	158, 909, 1131
BsmAI	GTCTC	2 cut(s)	504, 882
BsmFI	GGGAC	1 cut(s)	1244
BsmI	GAATGC	3 cut(s)	64, 640, 1006
BsnI	GGCC	2 cut(s)	750, 1124
Bsp1286I	GDGCHC	5 cut(s)	131, 357, 561, 956, 1632
Bsp1407I	TGTACA	3 cut(s)	232, 1218, 1521
Bsp143I	GATC	3 cut(s)	616, 757, 1009
BspACI	CCGC	3 cut(s)	256, 1043, 1511
BspANI	GGCC	2 cut(s)	750, 1124
BspCNI	CTCAG	7 cut(s)	351, 465, 502, 622, 703, 1026, 1173
BspDI	ATCGAT	1 cut(s)	1452
BspLI	GGNNCC	4 cut(s)	609, 1123, 1617, 1799
BspMAI	CTGCAG	2 cut(s)	252, 1120
BspMI	ACCTGC	1 cut(s)	715
BspOI	GCTAGC	1 cut(s)	1202
BspPI	GGATC	3 cut(s)	624, 765, 1004
BspQI	GCTCTTC	2 cut(s)	1286, 1539
BspT107I	GGYRCC	2 cut(s)	1615, 1797
BsrDI	GCAATG	1 cut(s)	648
BsrGI	TGTACA	3 cut(s)	232, 1218, 1521
BssECI	CCNNGG	3 cut(s)	744, 883, 1641
BssMI	GATC	3 cut(s)	616, 757, 1009
BssT1I	CCWWGG	2 cut(s)	744, 1641
Bst2UI	CCWGG	1 cut(s)	284
Bst4CI	ACNGT	6 cut(s)	15, 388, 774, 927, 1312, 1766
Bst6I	CTCTTC	4 cut(s)	1286, 1507, 1539, 1808
BstAPI	GCANNNNNTGC	1 cut(s)	1478
BstAUI	TGTACA	3 cut(s)	232, 1218, 1521
BstBAI	YACGTR	1 cut(s)	1760
BstC8I	GCNNGC	3 cut(s)	459, 1200, 1239
BstDEI	CTNAG	8 cut(s)	359, 431, 473, 489, 630, 711, 1034, 1181
BstDSI	CCRYGG	1 cut(s)	883
BstEII	GGTNACC	1 cut(s)	142
BstENI	CCTNNNNNAGG	1 cut(s)	1129
BstF5I	GGATG	7 cut(s)	235, 478, 741, 760, 1089, 1173, 1660
BstHHI	GCGC	2 cut(s)	376, 741
BstKTI	GATC	3 cut(s)	619, 760, 1012
BstMAI	GTCTC	2 cut(s)	504, 882
BstMBI	GATC	3 cut(s)	616, 757, 1009
BstMCI	CGRYCG	1 cut(s)	929
BstMWI	GCNNNNNNNGC	8 cut(s)	250, 256, 330, 747, 827, 1121, 1247, 1478
BstNI	CCWGG	1 cut(s)	284
BstNSI	RCATGY	1 cut(s)	1241
BstPI	GGTNACC	1 cut(s)	142
BstSCI	CCNGG	1 cut(s)	282
BstSFI	CTRYAG	2 cut(s)	248, 1116
BstSLI	GKGCMC	1 cut(s)	1632
BstV1I	GCAGC	8 cut(s)	240, 262, 1102, 1313, 1324, 1346, 1608, 1693
Bsu15I	ATCGAT	1 cut(s)	1452
BsuRI	GGCC	2 cut(s)	750, 1124
BsuTUI	ATCGAT	1 cut(s)	1452
BtgI	CCRYGG	1 cut(s)	883
BtsCI	GGATG	7 cut(s)	235, 478, 741, 760, 1089, 1173, 1660
BtsI	GCAGTG	3 cut(s)	645, 1524, 1630
BtsIMutI	CAGTG	5 cut(s)	645, 1226, 1336, 1524, 1630
BveI	ACCTGC	1 cut(s)	715
Cac8I	GCNNGC	3 cut(s)	459, 1200, 1239
CfoI	GCGC	2 cut(s)	376, 741
Cfr13I	GGNCC	2 cut(s)	748, 1122
ClaI	ATCGAT	1 cut(s)	1452
Csp6I	GTAC	6 cut(s)	233, 1142, 1219, 1498, 1522, 1798
CviAII	CATG	6 cut(s)	180, 330, 496, 662, 942, 1238
CviQI	GTAC	6 cut(s)	233, 1142, 1219, 1498, 1522, 1798
DdeI	CTNAG	8 cut(s)	359, 431, 473, 489, 630, 711, 1034, 1181
DpnI	GATC	3 cut(s)	618, 759, 1011
DpnII	GATC	3 cut(s)	616, 757, 1009
Eam1104I	CTCTTC	4 cut(s)	1286, 1507, 1539, 1808
EarI	CTCTTC	4 cut(s)	1286, 1507, 1539, 1808
EciI	GGCGGA	1 cut(s)	1058
Ecl136II	GAGCTC	2 cut(s)	129, 355
Eco130I	CCWWGG	2 cut(s)	744, 1641
Eco24I	GRGCYC	3 cut(s)	131, 357, 956
Eco32I	GATATC	1 cut(s)	1680
Eco53kI	GAGCTC	2 cut(s)	129, 355
Eco91I	GGTNACC	1 cut(s)	142
EcoICRI	GAGCTC	2 cut(s)	129, 355
EcoNI	CCTNNNNNAGG	1 cut(s)	1129
EcoO109I	RGGNCCY	2 cut(s)	748, 1122
EcoO65I	GGTNACC	1 cut(s)	142
EcoRII	CCWGG	1 cut(s)	282
EcoRV	GATATC	1 cut(s)	1680
EcoT14I	CCWWGG	2 cut(s)	744, 1641
EcoT22I	ATGCAT	2 cut(s)	1239, 1727
EcoT38I	GRGCYC	3 cut(s)	131, 357, 956
ErhI	CCWWGG	2 cut(s)	744, 1641
FaeI	CATG	6 cut(s)	183, 333, 499, 665, 945, 1241
FaqI	GGGAC	1 cut(s)	1244
FatI	CATG	6 cut(s)	179, 329, 495, 661, 941, 1237
Fnu4HI	GCNGC	9 cut(s)	251, 254, 257, 1116, 1302, 1335, 1338, 1597, 1707
FokI	GGATG	7 cut(s)	242, 465, 747, 748, 1096, 1160, 1667
FriOI	GRGCYC	3 cut(s)	131, 357, 956
Fsp4HI	GCNGC	9 cut(s)	251, 254, 257, 1116, 1302, 1335, 1338, 1597, 1707
FspBI	CTAG	5 cut(s)	69, 78, 678, 1199, 1263
GlaI	GCGC	2 cut(s)	375, 740
GluI	GCNGC	9 cut(s)	251, 254, 257, 1116, 1302, 1335, 1338, 1597, 1707
GsaI	CCCAGC	1 cut(s)	1564
GsuI	CTGGAG	1 cut(s)	398
HaeIII	GGCC	2 cut(s)	750, 1124
HapII	CCGG	1 cut(s)	1795
HhaI	GCGC	2 cut(s)	376, 741
Hin1II	CATG	6 cut(s)	183, 333, 499, 665, 945, 1241
Hin6I	GCGC	2 cut(s)	374, 739
HinP1I	GCGC	2 cut(s)	374, 739
HindIII	AAGCTT	1 cut(s)	722
HpaII	CCGG	1 cut(s)	1795
HphI	GGTGA	4 cut(s)	3, 154, 650, 1497
Hpy166II	GTNNAC	6 cut(s)	643, 887, 1168, 1524, 1630, 1757
Hpy188III	TCNNGA	8 cut(s)	152, 350, 358, 437, 605, 718, 1207, 1553
Hpy8I	GTNNAC	6 cut(s)	643, 887, 1168, 1524, 1630, 1757
HpyAV	CCTTC	6 cut(s)	152, 336, 447, 1414, 1418, 1700
HpyCH4III	ACNGT	6 cut(s)	15, 388, 774, 927, 1312, 1766
HpyCH4IV	ACGT	2 cut(s)	1475, 1759
HpyF10VI	GCNNNNNNNGC	8 cut(s)	250, 256, 330, 747, 827, 1121, 1247, 1478
HpyF3I	CTNAG	8 cut(s)	359, 431, 473, 489, 630, 711, 1034, 1181
HpySE526I	ACGT	2 cut(s)	1475, 1759
Hsp92II	CATG	6 cut(s)	183, 333, 499, 665, 945, 1241
HspAI	GCGC	2 cut(s)	374, 739
KpnI	GGTACC	1 cut(s)	1801
Kzo9I	GATC	3 cut(s)	616, 757, 1009
LguI	GCTCTTC	2 cut(s)	1286, 1539
LmnI	GCTCC	2 cut(s)	360, 607
Lsp1109I	GCAGC	8 cut(s)	240, 262, 1102, 1313, 1324, 1346, 1608, 1693
LweI	GCATC	4 cut(s)	81, 487, 726, 1281
MaeI	CTAG	5 cut(s)	69, 78, 678, 1199, 1263
MaeII	ACGT	2 cut(s)	1475, 1759
MaeIII	GTNAC	7 cut(s)	5, 142, 382, 974, 1184, 1268, 1760
MalI	GATC	3 cut(s)	618, 759, 1011
MboI	GATC	3 cut(s)	616, 757, 1009
MfeI	CAATTG	2 cut(s)	294, 1154
MhlI	GDGCHC	5 cut(s)	131, 357, 561, 956, 1632
MlyI	GAGTC	4 cut(s)	2, 590, 638, 1266
MmeI	TCCRAC	1 cut(s)	451
Mph1103I	ATGCAT	2 cut(s)	1239, 1727
MroXI	GAANNNNTTC	3 cut(s)	699, 1280, 1548
MseI	TTAA	3 cut(s)	312, 626, 1212
MspA1I	CMGCKG	3 cut(s)	253, 1337, 1511
MspI	CCGG	1 cut(s)	1795
MspR9I	CCNGG	1 cut(s)	284
MunI	CAATTG	2 cut(s)	294, 1154
Mva1269I	GAATGC	3 cut(s)	64, 640, 1006
MvaI	CCWGG	1 cut(s)	284
MwoI	GCNNNNNNNGC	8 cut(s)	250, 256, 330, 747, 827, 1121, 1247, 1478
NdeII	GATC	3 cut(s)	616, 757, 1009
NheI	GCTAGC	1 cut(s)	1198
NlaIII	CATG	6 cut(s)	183, 333, 499, 665, 945, 1241
NlaIV	GGNNCC	4 cut(s)	609, 1123, 1617, 1799
NmuCI	GTSAC	3 cut(s)	5, 142, 1268
NsiI	ATGCAT	2 cut(s)	1239, 1727
NspI	RCATGY	1 cut(s)	1241
PaeI	GCATGC	1 cut(s)	1241
PciSI	GCTCTTC	2 cut(s)	1286, 1539
PctI	GAATGC	3 cut(s)	64, 640, 1006
PdmI	GAANNNNTTC	3 cut(s)	699, 1280, 1548
PfeI	GAWTC	7 cut(s)	213, 689, 695, 824, 1658, 1771, 1784
PfoI	TCCNGGA	1 cut(s)	282
PkrI	GCNGC	9 cut(s)	252, 255, 258, 1117, 1303, 1336, 1339, 1598, 1708
PleI	GAGTC	4 cut(s)	2, 590, 638, 1265
PpsI	GAGTC	4 cut(s)	2, 590, 638, 1265
Ppu21I	YACGTR	1 cut(s)	1760
Psp124BI	GAGCTC	2 cut(s)	131, 357
Psp1406I	AACGTT	1 cut(s)	1475
Psp6I	CCWGG	1 cut(s)	282
PspEI	GGTNACC	1 cut(s)	142
PspFI	CCCAGC	1 cut(s)	1560
PspGI	CCWGG	1 cut(s)	282
PspN4I	GGNNCC	4 cut(s)	609, 1123, 1617, 1799
PspPI	GGNCC	2 cut(s)	748, 1122
PsrI	GAACNNNNNNTAC	2 cut(s)	216, 248
PstI	CTGCAG	2 cut(s)	252, 1120
PvuII	CAGCTG	2 cut(s)	253, 1337
RsaI	GTAC	6 cut(s)	234, 1143, 1220, 1499, 1523, 1799
RsaNI	GTAC	6 cut(s)	233, 1142, 1219, 1498, 1522, 1798
SacI	GAGCTC	2 cut(s)	131, 357
SapI	GCTCTTC	2 cut(s)	1286, 1539
SaqAI	TTAA	3 cut(s)	312, 626, 1212
SatI	GCNGC	9 cut(s)	251, 254, 257, 1116, 1302, 1335, 1338, 1597, 1707
Sau3AI	GATC	3 cut(s)	616, 757, 1009
Sau96I	GGNCC	2 cut(s)	748, 1122
ScaI	AGTACT	1 cut(s)	1143
SchI	GAGTC	4 cut(s)	2, 590, 638, 1266
ScrFI	CCNGG	1 cut(s)	284
SduI	GDGCHC	5 cut(s)	131, 357, 561, 956, 1632
SfaNI	GCATC	4 cut(s)	81, 487, 726, 1281
SfcI	CTRYAG	2 cut(s)	248, 1116
SmlI	CTYRAG	3 cut(s)	31, 348, 1126
SmoI	CTYRAG	3 cut(s)	31, 348, 1126
SpeI	ACTAGT	1 cut(s)	77
SphI	GCATGC	1 cut(s)	1241
SsiI	CCGC	3 cut(s)	256, 1043, 1511
SspI	AATATT	2 cut(s)	59, 367
SspMI	CTAG	5 cut(s)	69, 78, 678, 1199, 1263
SstI	GAGCTC	2 cut(s)	131, 357
StyD4I	CCNGG	1 cut(s)	282
StyI	CCWWGG	2 cut(s)	744, 1641
TaaI	ACNGT	6 cut(s)	15, 388, 774, 927, 1312, 1766
TaiI	ACGT	2 cut(s)	1478, 1762
TaqI	TCGA	5 cut(s)	929, 1024, 1149, 1452, 1576
TatI	WGTACW	5 cut(s)	232, 1141, 1218, 1497, 1521
TauI	GCSGC	1 cut(s)	259
TfiI	GAWTC	7 cut(s)	213, 689, 695, 824, 1658, 1771, 1784
Tru1I	TTAA	3 cut(s)	312, 626, 1212
Tru9I	TTAA	3 cut(s)	312, 626, 1212
TscAI	CASTG	5 cut(s)	645, 1233, 1336, 1531, 1637
TseFI	GTSAC	3 cut(s)	5, 142, 1268
TseI	GCWGC	8 cut(s)	250, 253, 1115, 1301, 1334, 1337, 1596, 1706
Tsp45I	GTSAC	3 cut(s)	5, 142, 1268
TspGWI	ACGGA	1 cut(s)	1453
TspRI	CASTG	5 cut(s)	645, 1233, 1336, 1531, 1637
VneI	GTGCAC	1 cut(s)	1628
XagI	CCTNNNNNAGG	1 cut(s)	1129
XapI	RAATTY	4 cut(s)	90, 314, 1663, 1818
XceI	RCATGY	1 cut(s)	1241
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1648
XmnI	GAANNNNTTC	3 cut(s)	699, 1280, 1548
XspI	CTAG	5 cut(s)	69, 78, 678, 1199, 1263
ZrmI	AGTACT	1 cut(s)	1143
Zsp2I	ATGCAT	2 cut(s)	1239, 1727

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.