pycom17g15090

Protein of unknown function, DUF547

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
12894988 .. 12900496
5509 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g15090.7

Sequence Viewer

Length: 1857 bp
ATGTGTGACTCACCGTTTGTGCAAACTGCCTTGAGCCAAAGCGTTTCGTTTTGTAAATATTCGCATTCTAGCATCACTAGTTATTCGGAAATTCAGTCATATTCTGCAAAAGAGCTTCAGAGTGAGAGCTCATTTTCACAGGTGACCAATCCCGATGAAGGTATTGGAAGATTTGGGTCGTGCTCTAAAGGTAGTGATACTTACCATTACAGATTCCAGCTTGAACATGATGTACAAAGGTTGCAACTGCAGCTGCGACAAGAAGTAGAGCTGCATACTATCCTGGAAAATGCAATTGAGAAAAATGCTGTTAAATTTTCCAGTCCGTCATGCCTCCCTTTCTATGCTCAAGAGCTCCTGAGCAATATTTCTGCCCTGGAGGTTACAGTTTCAAAACTTGAACAAGAGTTGGTTGCTTTGCAATTCCAACTTAGTCAAGAAAGAAATGAACGAAGGCTTGCTGAATATCGTCTGAGGCATCCATCTCCTCAGTCCATGTCTCCTCACTCCTCTGACATTATGAAACTAATGATTTCATCTTCTTTGAGGACTTCAGAGCACTCCAATCGTAAATTACATCATTCCTCTGAAGATGACTCATATCAGGAGCCAAGGGATCAACAATCAGATGGCGGAACATCTTTACAGTCGGTAACTGAGAATGCAGTGGACTCCATTGCAATTCACCATGATATGAAAATGTCTAGGAAGATGGATTCTGAATCTTTTCAACCTGCTGAGTTCGGGAAGCTTCCTAAAGGGATGCCCCCAAAGGGCCTTTGGGATCATCCAAACCAACTGTCAGAGGAGATGGTTAGATGTATGAAAAATATATTCATATCTTTGGCTGATGCAGCTACCCCATCAAAATCTTCAGCACAAGAGAACCAATGCTTGTCTATGTCTCCCCGTGGACATCTTTCCAATTCCTCTTGGTGGTCATCATCTGAACGGTCGATGATCGCATCATGGGTGCAGAGCCCACAGGTTGATATACAGAGTAACTCTGAAGTATTAGCTTCAGAGAATGCCTGTGATCCCTACAAAGTTCGTGGAAAACTGAGTTGGGCGGACATTGGGAACTATGGATTAGCGACTGAAGTTTCTTGGATGTCAGTTGGGAAGAAGCAATTAGAATATGCTGCAGGGGCCTTGAAGAGGTTCAGAGTACTTGTCGAGCAATTGGCAAAAGTAAACCCTATCCATCTGAGTTACAATGAGAAGCTAGCTTTCTGGATTAACTTGTACAATGCACTGATTATGCATGCTTACTTGGCTTATGGAGTCCCTAGAAGTGACTTGAAGCTCTTCTCTTTGATGCAAAAGGCAGCTTATACTGTCGGCGGTCATTCTTTCAGTGCAGCTGCTATTGAGTATGCAATTCTGAAGATGAAGCCACCACTCCATAGACCACAAATTGCTTTGCTTCTTGCCCTTCACAAGCTGAAGGTGTCAGATGAGCAACGGAAGTCTGCAATCGATACCTATGAACCACTTGCAACATTTGCTTTGAGCTGTGGAATGTACTCTTCACCAGCGGTAAGAATCTACACTGCTAAAAATGTGAGGGAAGAGCTTCAGGAAGCCCAGTGTGATTTTGTTCGAGCTTCGGTTGGGGTTAGCAGCAGGGGGAGGTTGTTGGTGCCAAAAATGGTGCACTGCTTTGCCAAGGGCATTGTGGATGATTCAAATTTAGCTGTGTGGATATCACATTACCTTCCGCCCCACCAAGCTGCCTTTGTTGAACAATGCATATCACAGAGGCGACAAAAACTGCTTGGTTCACGCAACTGTGGGATTCTTCCATTTGATTCGCACTTCCGGTACCTCTTCCTGCCTGACAAAATTCCTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

619

Amino Acids

69.54

Weight (kDa)

7.62

Isoelectric Point (pI)

64.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 742
Acc65I GGTACC 1 cut(s) 1824
AccB1I GGYRCC 2 cut(s) 1642, 1824
AciI CCGC 5 cut(s) 633, 1070, 1344, 1538, 1721
AclWI GGATC 3 cut(s) 624, 792, 1031
AcsI RAATTY 4 cut(s) 90, 314, 1690, 1845
AfaI GTAC 5 cut(s) 234, 1170, 1247, 1526, 1826
AfiI CCNNNNNNNGG 4 cut(s) 158, 773, 936, 1158
AgsI TTSAA 8 cut(s) 224, 393, 401, 731, 1156, 1303, 1689, 1745
AhlI ACTAGT 1 cut(s) 77
AjnI CCWGG 2 cut(s) 282, 375
AjuI GAANNNNNNNTTGG 2 cut(s) 1048, 1080
Alw21I GWGCWC 5 cut(s) 131, 185, 357, 561, 1659
Alw26I GTCTC 2 cut(s) 504, 909
Alw44I GTGCAC 1 cut(s) 1655
AlwI GGATC 3 cut(s) 624, 792, 1031
AoxI GGCC 2 cut(s) 775, 1149
ApaLI GTGCAC 1 cut(s) 1655
ApoI RAATTY 4 cut(s) 90, 314, 1690, 1845
ArsI GACNNNNNNTTYG 3 cut(s) 31, 785, 817
Asp700I GAANNNNTTC 4 cut(s) 726, 1160, 1307, 1575
Asp718I GGTACC 1 cut(s) 1824
AspS9I GGNCC 2 cut(s) 775, 1149
AsuHPI GGTGA 4 cut(s) 3, 154, 677, 1524
AsuNHI GCTAGC 1 cut(s) 1225
BaeGI GKGCMC 1 cut(s) 1659
BanI GGYRCC 2 cut(s) 1642, 1824
BanII GRGCYC 3 cut(s) 131, 357, 983
Bbv12I GWGCWC 5 cut(s) 131, 185, 357, 561, 1659
BccI CCATC 6 cut(s) 490, 623, 706, 805, 871, 1212
BcgI CGANNNNNNTGC 2 cut(s) 548, 582
BciT130I CCWGG 2 cut(s) 284, 377
BcoDI GTCTC 2 cut(s) 504, 909
BcuI ACTAGT 1 cut(s) 77
BfaI CTAG 5 cut(s) 69, 78, 705, 1226, 1290
BfmI CTRYAG 2 cut(s) 248, 1143
BfuAI ACCTGC 1 cut(s) 742
BmcAI AGTACT 1 cut(s) 1170
Bme1390I CCNGG 2 cut(s) 284, 377
BmgT120I GGNCC 2 cut(s) 775, 1149
BmiI GGNNCC 4 cut(s) 609, 1150, 1644, 1826
BmrFI CCNGG 2 cut(s) 284, 377
BmrI ACTGGG 1 cut(s) 1582
BmsI GCATC 6 cut(s) 81, 487, 753, 841, 974, 1308
BmtI GCTAGC 1 cut(s) 1229
BmuI ACTGGG 1 cut(s) 1582
BpmI CTGGAG 1 cut(s) 398
Bpu10I CCTNAGC 1 cut(s) 359
BpuEI CTTGAG 2 cut(s) 52, 333
Bsa29I ATCGAT 1 cut(s) 1479
BsaJI CCNNGG 4 cut(s) 375, 611, 910, 1668
BsaWI WCCGGW 1 cut(s) 1821
Bsc4I CCNNNNNNNGG 4 cut(s) 158, 773, 936, 1158
Bse1I ACTGG 2 cut(s) 321, 1588
Bse3DI GCAATG 1 cut(s) 675
BseBI CCWGG 2 cut(s) 284, 377
BseCI ATCGAT 1 cut(s) 1479
BseDI CCNNGG 4 cut(s) 375, 611, 910, 1668
BseGI GGATG 5 cut(s) 478, 768, 787, 1116, 1687
BseLI CCNNNNNNNGG 4 cut(s) 158, 773, 936, 1158
BseMI GCAATG 1 cut(s) 675
BseMII CTCAG 7 cut(s) 350, 464, 503, 648, 729, 1052, 1199
BseNI ACTGG 2 cut(s) 321, 1588
BseRI GAGGAG 4 cut(s) 477, 492, 499, 821
BseSI GKGCMC 1 cut(s) 1659
BsgI GTGCAG 2 cut(s) 995, 1380
Bsh1285I CGRYCG 1 cut(s) 956
BshFI GGCC 2 cut(s) 777, 1151
BshNI GGYRCC 2 cut(s) 1642, 1824
BshVI ATCGAT 1 cut(s) 1479
BsiEI CGRYCG 1 cut(s) 956
BsiHKAI GWGCWC 5 cut(s) 131, 185, 357, 561, 1659
BsiSI CCGG 1 cut(s) 1822
BslFI GGGAC 1 cut(s) 1271
BslI CCNNNNNNNGG 4 cut(s) 158, 773, 936, 1158
BsmAI GTCTC 2 cut(s) 504, 909
BsmFI GGGAC 1 cut(s) 1271
BsmI GAATGC 3 cut(s) 64, 667, 1033
BsnI GGCC 2 cut(s) 777, 1151
Bsp1286I GDGCHC 6 cut(s) 131, 185, 357, 561, 983, 1659
Bsp1407I TGTACA 2 cut(s) 232, 1245
Bsp143I GATC 4 cut(s) 616, 784, 960, 1036
BspACI CCGC 5 cut(s) 633, 1070, 1344, 1538, 1721
BspANI GGCC 2 cut(s) 777, 1151
BspCNI CTCAG 7 cut(s) 351, 465, 502, 649, 730, 1053, 1200
BspDI ATCGAT 1 cut(s) 1479
BspLI GGNNCC 4 cut(s) 609, 1150, 1644, 1826
BspMAI CTGCAG 2 cut(s) 252, 1147
BspMI ACCTGC 1 cut(s) 742
BspOI GCTAGC 1 cut(s) 1229
BspPI GGATC 3 cut(s) 624, 792, 1031
BspQI GCTCTTC 2 cut(s) 1313, 1566
BspT107I GGYRCC 2 cut(s) 1642, 1824
BsrDI GCAATG 1 cut(s) 675
BsrGI TGTACA 2 cut(s) 232, 1245
BsrI ACTGG 2 cut(s) 321, 1588
BssECI CCNNGG 4 cut(s) 375, 611, 910, 1668
BssMI GATC 4 cut(s) 616, 784, 960, 1036
BssT1I CCWWGG 2 cut(s) 611, 1668
Bst2UI CCWGG 2 cut(s) 284, 377
Bst4CI ACNGT 7 cut(s) 15, 388, 648, 801, 954, 1339, 1793
Bst6I CTCTTC 5 cut(s) 1151, 1313, 1534, 1566, 1835
BstAPI GCANNNNNTGC 1 cut(s) 1505
BstAUI TGTACA 2 cut(s) 232, 1245
BstC8I GCNNGC 3 cut(s) 459, 1227, 1266
BstDEI CTNAG 8 cut(s) 359, 431, 473, 489, 657, 738, 1061, 1208
BstDSI CCRYGG 1 cut(s) 910
BstEII GGTNACC 1 cut(s) 142
BstENI CCTNNNNNAGG 1 cut(s) 1156
BstF5I GGATG 5 cut(s) 478, 768, 787, 1116, 1687
BstKTI GATC 4 cut(s) 619, 787, 963, 1039
BstMAI GTCTC 2 cut(s) 504, 909
BstMBI GATC 4 cut(s) 616, 784, 960, 1036
BstMCI CGRYCG 1 cut(s) 956
BstMWI GCNNNNNNNGC 5 cut(s) 250, 854, 1148, 1274, 1505
BstNI CCWGG 2 cut(s) 284, 377
BstNSI RCATGY 1 cut(s) 1268
BstPI GGTNACC 1 cut(s) 142
BstSCI CCNGG 2 cut(s) 282, 375
BstSFI CTRYAG 2 cut(s) 248, 1143
BstSLI GKGCMC 1 cut(s) 1659
Bsu15I ATCGAT 1 cut(s) 1479
BsuRI GGCC 2 cut(s) 777, 1151
BsuTUI ATCGAT 1 cut(s) 1479
BtgI CCRYGG 1 cut(s) 910
BtsCI GGATG 5 cut(s) 478, 768, 787, 1116, 1687
BtsI GCAGTG 3 cut(s) 672, 1551, 1657
BtsIMutI CAGTG 6 cut(s) 672, 1253, 1363, 1551, 1595, 1657
BveI ACCTGC 1 cut(s) 742
Cac8I GCNNGC 3 cut(s) 459, 1227, 1266
Cfr13I GGNCC 2 cut(s) 775, 1149
ClaI ATCGAT 1 cut(s) 1479
Csp6I GTAC 5 cut(s) 233, 1169, 1246, 1525, 1825
CspCI CAANNNNNGTGG 2 cut(s) 1033, 1068
CviAII CATG 6 cut(s) 227, 330, 496, 689, 969, 1265
CviQI GTAC 5 cut(s) 233, 1169, 1246, 1525, 1825
DdeI CTNAG 8 cut(s) 359, 431, 473, 489, 657, 738, 1061, 1208
DpnI GATC 4 cut(s) 618, 786, 962, 1038
DpnII GATC 4 cut(s) 616, 784, 960, 1036
Eam1104I CTCTTC 5 cut(s) 1151, 1313, 1534, 1566, 1835
EarI CTCTTC 5 cut(s) 1151, 1313, 1534, 1566, 1835
EciI GGCGGA 3 cut(s) 648, 1085, 1710
Ecl136II GAGCTC 2 cut(s) 129, 355
Eco130I CCWWGG 2 cut(s) 611, 1668
Eco24I GRGCYC 3 cut(s) 131, 357, 983
Eco32I GATATC 1 cut(s) 1707
Eco53kI GAGCTC 2 cut(s) 129, 355
Eco91I GGTNACC 1 cut(s) 142
EcoICRI GAGCTC 2 cut(s) 129, 355
EcoNI CCTNNNNNAGG 1 cut(s) 1156
EcoO109I RGGNCCY 2 cut(s) 775, 1149
EcoO65I GGTNACC 1 cut(s) 142
EcoRII CCWGG 2 cut(s) 282, 375
EcoRV GATATC 1 cut(s) 1707
EcoT14I CCWWGG 2 cut(s) 611, 1668
EcoT22I ATGCAT 2 cut(s) 1266, 1754
EcoT38I GRGCYC 3 cut(s) 131, 357, 983
ErhI CCWWGG 2 cut(s) 611, 1668
FaeI CATG 6 cut(s) 230, 333, 499, 692, 972, 1268
FaqI GGGAC 1 cut(s) 1271
FatI CATG 6 cut(s) 226, 329, 495, 688, 968, 1264
FokI GGATG 5 cut(s) 465, 774, 775, 1123, 1694
FriOI GRGCYC 3 cut(s) 131, 357, 983
FspBI CTAG 5 cut(s) 69, 78, 705, 1226, 1290
GsuI CTGGAG 1 cut(s) 398
HaeIII GGCC 2 cut(s) 777, 1151
HapII CCGG 1 cut(s) 1822
Hin1II CATG 6 cut(s) 230, 333, 499, 692, 972, 1268
HindIII AAGCTT 1 cut(s) 749
HpaII CCGG 1 cut(s) 1822
HphI GGTGA 4 cut(s) 3, 154, 677, 1524
Hpy166II GTNNAC 5 cut(s) 670, 914, 1195, 1657, 1784
Hpy188III TCNNGA 8 cut(s) 152, 350, 358, 437, 605, 745, 1234, 1580
Hpy8I GTNNAC 5 cut(s) 670, 914, 1195, 1657, 1784
HpyAV CCTTC 5 cut(s) 152, 447, 1441, 1445, 1727
HpyCH4III ACNGT 7 cut(s) 15, 388, 648, 801, 954, 1339, 1793
HpyF10VI GCNNNNNNNGC 5 cut(s) 250, 854, 1148, 1274, 1505
HpyF3I CTNAG 8 cut(s) 359, 431, 473, 489, 657, 738, 1061, 1208
Hsp92II CATG 6 cut(s) 230, 333, 499, 692, 972, 1268
KpnI GGTACC 1 cut(s) 1828
Kzo9I GATC 4 cut(s) 616, 784, 960, 1036
LguI GCTCTTC 2 cut(s) 1313, 1566
LmnI GCTCC 2 cut(s) 360, 607
LweI GCATC 6 cut(s) 81, 487, 753, 841, 974, 1308
MaeI CTAG 5 cut(s) 69, 78, 705, 1226, 1290
MaeIII GTNAC 7 cut(s) 5, 142, 382, 652, 1001, 1211, 1295
MalI GATC 4 cut(s) 618, 786, 962, 1038
MboI GATC 4 cut(s) 616, 784, 960, 1036
MfeI CAATTG 2 cut(s) 294, 1181
MhlI GDGCHC 6 cut(s) 131, 185, 357, 561, 983, 1659
MlyI GAGTC 4 cut(s) 2, 590, 665, 1293
MmeI TCCRAC 1 cut(s) 451
Mph1103I ATGCAT 2 cut(s) 1266, 1754
MroXI GAANNNNTTC 4 cut(s) 726, 1160, 1307, 1575
MseI TTAA 2 cut(s) 312, 1239
MspA1I CMGCKG 3 cut(s) 253, 1364, 1538
MspI CCGG 1 cut(s) 1822
MspR9I CCNGG 2 cut(s) 284, 377
MunI CAATTG 2 cut(s) 294, 1181
Mva1269I GAATGC 3 cut(s) 64, 667, 1033
MvaI CCWGG 2 cut(s) 284, 377
MwoI GCNNNNNNNGC 5 cut(s) 250, 854, 1148, 1274, 1505
NdeII GATC 4 cut(s) 616, 784, 960, 1036
NheI GCTAGC 1 cut(s) 1225
NlaIII CATG 6 cut(s) 230, 333, 499, 692, 972, 1268
NlaIV GGNNCC 4 cut(s) 609, 1150, 1644, 1826
NmuCI GTSAC 3 cut(s) 5, 142, 1295
NsiI ATGCAT 2 cut(s) 1266, 1754
NspI RCATGY 1 cut(s) 1268
PaeI GCATGC 1 cut(s) 1268
PciSI GCTCTTC 2 cut(s) 1313, 1566
PctI GAATGC 3 cut(s) 64, 667, 1033
PdmI GAANNNNTTC 4 cut(s) 726, 1160, 1307, 1575
PfeI GAWTC 7 cut(s) 213, 716, 722, 1545, 1685, 1798, 1811
PfoI TCCNGGA 1 cut(s) 282
PleI GAGTC 4 cut(s) 2, 590, 665, 1292
PpsI GAGTC 4 cut(s) 2, 590, 665, 1292
Psp124BI GAGCTC 2 cut(s) 131, 357
Psp6I CCWGG 2 cut(s) 282, 375
PspEI GGTNACC 1 cut(s) 142
PspGI CCWGG 2 cut(s) 282, 375
PspN4I GGNNCC 4 cut(s) 609, 1150, 1644, 1826
PspPI GGNCC 2 cut(s) 775, 1149
PsrI GAACNNNNNNTAC 2 cut(s) 216, 248
PstI CTGCAG 2 cut(s) 252, 1147
PvuII CAGCTG 2 cut(s) 253, 1364
RsaI GTAC 5 cut(s) 234, 1170, 1247, 1526, 1826
RsaNI GTAC 5 cut(s) 233, 1169, 1246, 1525, 1825
SacI GAGCTC 2 cut(s) 131, 357
SapI GCTCTTC 2 cut(s) 1313, 1566
SaqAI TTAA 2 cut(s) 312, 1239
Sau3AI GATC 4 cut(s) 616, 784, 960, 1036
Sau96I GGNCC 2 cut(s) 775, 1149
ScaI AGTACT 1 cut(s) 1170
SchI GAGTC 4 cut(s) 2, 590, 665, 1293
ScrFI CCNGG 2 cut(s) 284, 377
SduI GDGCHC 6 cut(s) 131, 185, 357, 561, 983, 1659
SfaNI GCATC 6 cut(s) 81, 487, 753, 841, 974, 1308
SfcI CTRYAG 2 cut(s) 248, 1143
SmlI CTYRAG 2 cut(s) 31, 348
SmoI CTYRAG 2 cut(s) 31, 348
SpeI ACTAGT 1 cut(s) 77
SphI GCATGC 1 cut(s) 1268
SsiI CCGC 5 cut(s) 633, 1070, 1344, 1538, 1721
SspI AATATT 2 cut(s) 59, 367
SspMI CTAG 5 cut(s) 69, 78, 705, 1226, 1290
SstI GAGCTC 2 cut(s) 131, 357
StyD4I CCNGG 2 cut(s) 282, 375
StyI CCWWGG 2 cut(s) 611, 1668
TaaI ACNGT 7 cut(s) 15, 388, 648, 801, 954, 1339, 1793
TaqI TCGA 4 cut(s) 956, 1176, 1479, 1603
TatI WGTACW 4 cut(s) 232, 1168, 1245, 1524
TfiI GAWTC 7 cut(s) 213, 716, 722, 1545, 1685, 1798, 1811
Tru1I TTAA 2 cut(s) 312, 1239
Tru9I TTAA 2 cut(s) 312, 1239
TscAI CASTG 6 cut(s) 672, 1260, 1363, 1558, 1595, 1664
TseFI GTSAC 3 cut(s) 5, 142, 1295
Tsp45I GTSAC 3 cut(s) 5, 142, 1295
TspDTI ATGAA 9 cut(s) 171, 462, 525, 536, 710, 826, 839, 1406, 1503
TspGWI ACGGA 2 cut(s) 315, 1480
TspRI CASTG 6 cut(s) 672, 1260, 1363, 1558, 1595, 1664
VneI GTGCAC 1 cut(s) 1655
XagI CCTNNNNNAGG 1 cut(s) 1156
XapI RAATTY 4 cut(s) 90, 314, 1690, 1845
XceI RCATGY 1 cut(s) 1268
XcmI CCANNNNNNNNNTGG 2 cut(s) 777, 1675
XmnI GAANNNNTTC 4 cut(s) 726, 1160, 1307, 1575
XspI CTAG 5 cut(s) 69, 78, 705, 1226, 1290
ZrmI AGTACT 1 cut(s) 1170
Zsp2I ATGCAT 2 cut(s) 1266, 1754
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.