Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001176

Physical Location & Seq

Genomic Coordinates Forward (+)

51899857 .. 51902666

Gene Structure 2810 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0406700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1887 bp

ATGGATCCAAGGCTTTTAGTGTGCATTAGCAGCAACAACATACCTGAATTTATCGACTTACATCATGAAAATGAAGGAATTATTGCGCAAAGAACAGCTGATTCCTTCAACACAGTTTTACACCTTGCTTCGAAACTGGGACAAAATGACATGGTCCTGGAGATTATTAAGTTATGCCCTGAATTGGTTGCTGCTGAAAACAAGTACCTTGAGACTCCAGTTCATGAAGCTTGTCGCCTTGGAAATGCCAACATCTTGAAGCTGCTGTTAGAAGCCAATCCTCAAGCAGCAAGTAAGCTCAATGTTGAGAAAAAGAGTGCTTCTTTTCTAGCTTGCAGTCTGGGCCATCTTGATGCAGTGAATCTCCTATTGAATCAACCTTGGATGGAGAACTTAGAGGATGTTGGGCTTGATCAAACATGTATTAATGTTGCTGCATCCAATGGACACACAGATATTGTTAGAGAGATACTAAACATCTGCCCTAACTATGCTCAAAAGGCTGATGACAATGGAAATTCACCTTTGCACTATGCTTGCAACAAAGGGCACAGGGAAATAACCTGGTTACTGCTACAGCGTGATGTCAATCTGGCCTTGCAGTATAACAACAATGGTTATACACCTTCTCATTTGGCAGCAATAAATGGAAACATATCAGTCCTTGAAGACTTCGCATTGAAAGCTCCAGCGGCTTTTCATTATCTCACAAAAGAAGAGGAGACAATATTTCATCTGACTGTGAGATACGGCAAATATCAAGCTTTGTTATTCTTGGTGCATGTTGCTAACAGTACTAACCTCCTTCACTGTCAAGATCGATATGGTAACACTATCTTGCACCTTGCAGTTTCTGGAGCGCGTTATGAGATTGCTGAGTACTTGATCAACAAAGCAAAGATGGAGATTAATTCGCGGAACAGCAAAGGACTTACTGCATTTGACCTCCTCACTCAGGCCAAAGACAGTGTAGAGACTCGTCATCTTCAGACAATATTCCATAAAGCCGGTGGTGAAAGGTACACTAATGTGACAAGTACTTGTTCACCAGAAACATCGTCTTCAAGGCAGAGTTACATATTCGAATCAGACATGTCTATTACAAATGAAAATGCTTTACCCTCTTTGCAAGAAATAACCTGCACTCAGCCAGACAACCAATACAAGTTAAGACAGTCATCGATACTCCACAATCAAGTTCAAGGGAGATTTGACGAGGAAGCATACAAACTGAAGTCCTCTCCCTCAACCAACTCGCATCATCAACGCAGCAAGTCTTCGAACAAAAGGCACTGCAAAGATCATAAGCAGCATAAGATGTACAGAGAGGCGATACAGAATGCGAGGAACACCATAACACTAGTTGCCATTTTAATTGCAACAGTTACTTTTACTGCTGGAATTACCCCTCCAGGCGGTGTCTATCAGGATGGAGCAATGAAAGGGAAGTCGATAGCAGGCACAACAACATCTTTCAAGGTGTTTGCAATAAGCAATGACATTGCTCTCTTTTCATCACTGTCAATAGTTGTTGTTCTTGTTAGTATCATACCTTTCAGACGAAAACCGCAGATGAATCTCTTGGTGTTTGCCCACAAGGTCATGTGGGTAGCTGTGGCTTTCATGGCAACAGGTTATGTTGCAGCCACATGGGTGATCATGCCGAGAAATCATGGGACGGCTTTTGTGTTTGTGGCTCTACTGTCTGTCAGTGGTGGCACTCTAGGAACAATTTTCATTGGTTTGGGAGTGATGCTTGTGGATCATTGGCTAAGAAAGTTGAATTGGAGGAAACTGAAAAGGGGAATCTGGGGAGGTGCAGATGAAATTGAAAGCCAAAATTCTGATGTTGAGAGCTCATTCCATCAAGGCTATCACTCATACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF547 Lzipper-MIP1

Protein Analysis

628

Amino Acids

69.9

Weight (kDa)

7.67

Isoelectric Point (pI)

40.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	8 - 93	1.6e-06	Ankyrin repeats (3 copies)
Ank_2	PF12796	40 - 125	1.5e-09	Ankyrin repeats (3 copies)
Ank_2	PF12796	110 - 197	2.4e-14	Ankyrin repeats (3 copies)
Ank_2	PF12796	143 - 223	3.3e-14	Ankyrin repeats (3 copies)
Ank_2	PF12796	211 - 306	6.1e-10	Ankyrin repeats (3 copies)
Ank_5	PF13857	268 - 316	2.2e-08	Ankyrin repeats (many copies)
PGG	PF13962	443 - 552	4e-30	Domain of unknown function

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001176)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13000 AT3G13000 AT3G13000
fragaria_vesca	FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420
malus_domestica	MD09G1169500.v1.1 MD17G1157700.v1.1
prunus_persica	Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1
pyrus_communis	pycom09g08690 pycom17g15090
rosa_chinensis	RchiOBHm_Chr1g0315101 RchiOBHm_Chr1g0315561 RchiOBHm_Chr1g0322971 RchiOBHm_Chr2g0090201 RchiOBHm_Chr2g0148391 RchiOBHm_Chr5g0049331
rosa_laevigata	RLG00000002464 RLG00000019778 RLG00000020347 RLG00000020398 RLG00000030746
rosa_multiflora	Rmu_co8078922.1_g000001 Rmu_sc0007047.1_g000001 Rmu_sc0009059.1_g000004
rosa_roxburghii	Rroxscaffold_2G00098770
rosa_rugosa	Rorug01G0399600 Rorug02G0406300 Rorug02G0406400 Rorug02G0406500 Rorug02G0406600 Rorug02G0406700
rosa_samantha	Rh1AG015100 Rh1AG015300 Rh2AG465400 Rh2BG478300 Rh2CG451900 Rh2DG487100 Rh4AG101900 Rh4AG113600 Rh4CG175600
rosa_wichuraiana	Rw1G000760 Rw2G037930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	87
Acc36I	ACCTGC	1 cut(s)	1148
AccII	CGCG	2 cut(s)	862, 916
AciI	CCGC	4 cut(s)	692, 916, 1416, 1568
AclWI	GGATC	2 cut(s)	12, 1770
AcsI	RAATTY	3 cut(s)	47, 517, 1840
AcuI	CTGAAG	2 cut(s)	971, 1253
AfaI	GTAC	6 cut(s)	206, 796, 881, 1022, 1039, 1322
AfiI	CCNNNNNNNGG	3 cut(s)	184, 955, 1415
AflIII	ACRYGT	2 cut(s)	419, 1092
AhlI	ACTAGT	1 cut(s)	1360
AjnI	CCWGG	3 cut(s)	156, 563, 1411
AjuI	GAANNNNNNNTTGG	2 cut(s)	1768, 1800
AleI	CACNNNNGTG	2 cut(s)	1028, 1652
AluBI	AGCT	9 cut(s)	98, 230, 262, 298, 332, 686, 764, 1613, 1857
AluI	AGCT	9 cut(s)	98, 230, 262, 298, 332, 686, 764, 1613, 1857
Alw21I	GWGCWC	1 cut(s)	1859
Alw26I	GTCTC	3 cut(s)	206, 716, 968
AlwI	GGATC	2 cut(s)	12, 1770
AlwNI	CAGNNNCTG	1 cut(s)	854
AoxI	GGCC	3 cut(s)	343, 594, 957
ApeKI	GCWGC	9 cut(s)	30, 191, 262, 287, 434, 638, 1269, 1309, 1643
ApoI	RAATTY	3 cut(s)	47, 517, 1840
AseI	ATTAAT	2 cut(s)	426, 909
AspLEI	GCGC	2 cut(s)	88, 862
AspS9I	GGNCC	2 cut(s)	154, 343
AsuHPI	GGTGA	4 cut(s)	513, 1025, 1038, 1666
AsuII	TTCGAA	3 cut(s)	131, 1083, 1280
AvaII	GGWCC	1 cut(s)	154
BaeGI	GKGCMC	1 cut(s)	552
BamHI	GGATCC	1 cut(s)	4
BanII	GRGCYC	1 cut(s)	1859
BbsI	GAAGAC	3 cut(s)	675, 1053, 1269
Bbv12I	GWGCWC	1 cut(s)	1859
BbvI	GCAGC	9 cut(s)	42, 178, 249, 299, 421, 650, 1281, 1321, 1655
BccI	CCATC	5 cut(s)	354, 379, 895, 1424, 1872
BceAI	ACGGC	2 cut(s)	766, 1695
BciT130I	CCWGG	3 cut(s)	158, 565, 1413
BclI	TGATCA	3 cut(s)	412, 885, 1656
BcoDI	GTCTC	3 cut(s)	206, 716, 968
BcuI	ACTAGT	1 cut(s)	1360
BfaI	CTAG	3 cut(s)	329, 1361, 1724
BfmI	CTRYAG	1 cut(s)	575
BfuAI	ACCTGC	1 cut(s)	1148
BmcAI	AGTACT	3 cut(s)	796, 881, 1039
Bme1390I	CCNGG	3 cut(s)	158, 565, 1413
Bme18I	GGWCC	1 cut(s)	154
BmgT120I	GGNCC	2 cut(s)	154, 343
BmiI	GGNNCC	1 cut(s)	6
BmrFI	CCNGG	3 cut(s)	158, 565, 1413
BmrI	ACTGGG	1 cut(s)	146
BmsI	GCATC	4 cut(s)	343, 446, 1267, 1743
BmuI	ACTGGG	1 cut(s)	146
BpiI	GAAGAC	3 cut(s)	675, 1053, 1269
BpmI	CTGGAG	5 cut(s)	179, 201, 672, 876, 1395
Bpu14I	TTCGAA	3 cut(s)	131, 1083, 1280
BpuEI	CTTGAG	2 cut(s)	230, 267
Bsa29I	ATCGAT	2 cut(s)	820, 1181
BsaBI	GATNNNNATC	1 cut(s)	588
BsaJI	CCNNGG	3 cut(s)	8, 238, 380
Bsc4I	CCNNNNNNNGG	3 cut(s)	184, 955, 1415
Bse118I	RCCGGY	1 cut(s)	1007
Bse1I	ACTGG	2 cut(s)	141, 218
Bse3DI	GCAATG	3 cut(s)	1443, 1500, 1501
Bse8I	GATNNNNATC	1 cut(s)	588
BseBI	CCWGG	3 cut(s)	158, 565, 1413
BseCI	ATCGAT	2 cut(s)	820, 1181
BseDI	CCNNGG	3 cut(s)	8, 238, 380
BseGI	GGATG	4 cut(s)	390, 406, 437, 1435
BseJI	GATNNNNATC	1 cut(s)	588
BseLI	CCNNNNNNNGG	3 cut(s)	184, 955, 1415
BseMI	GCAATG	3 cut(s)	1443, 1500, 1501
BseMII	CTCAG	3 cut(s)	867, 968, 1160
BseNI	ACTGG	2 cut(s)	141, 218
BseRI	GAGGAG	2 cut(s)	734, 938
BseSI	GKGCMC	1 cut(s)	552
BseXI	GCAGC	9 cut(s)	42, 178, 249, 299, 421, 650, 1281, 1321, 1655
BsgI	GTGCAG	2 cut(s)	1126, 1839
Bsh1236I	CGCG	2 cut(s)	862, 916
BshFI	GGCC	3 cut(s)	345, 596, 959
BshVI	ATCGAT	2 cut(s)	820, 1181
BsiHKAI	GWGCWC	1 cut(s)	1859
BsiSI	CCGG	1 cut(s)	1008
BslFI	GGGAC	2 cut(s)	153, 1690
BslI	CCNNNNNNNGG	3 cut(s)	184, 955, 1415
BsmAI	GTCTC	3 cut(s)	206, 716, 968
BsmFI	GGGAC	2 cut(s)	153, 1690
BsmI	GAATGC	1 cut(s)	1345
BsnI	GGCC	3 cut(s)	345, 596, 959
Bsp119I	TTCGAA	3 cut(s)	131, 1083, 1280
Bsp1286I	GDGCHC	2 cut(s)	552, 1859
Bsp1407I	TGTACA	1 cut(s)	1320
Bsp143I	GATC	7 cut(s)	4, 412, 817, 885, 1300, 1656, 1762
BspACI	CCGC	4 cut(s)	692, 916, 1416, 1568
BspANI	GGCC	3 cut(s)	345, 596, 959
BspCNI	CTCAG	3 cut(s)	868, 967, 1159
BspDI	ATCGAT	2 cut(s)	820, 1181
BspFNI	CGCG	2 cut(s)	862, 916
BspHI	TCATGA	2 cut(s)	64, 223
BspLI	GGNNCC	1 cut(s)	6
BspMI	ACCTGC	1 cut(s)	1148
BspPI	GGATC	2 cut(s)	12, 1770
BspT104I	TTCGAA	3 cut(s)	131, 1083, 1280
BsrDI	GCAATG	3 cut(s)	1443, 1500, 1501
BsrFI	RCCGGY	1 cut(s)	1007
BsrGI	TGTACA	1 cut(s)	1320
BsrI	ACTGG	2 cut(s)	141, 218
BssAI	RCCGGY	1 cut(s)	1007
BssECI	CCNNGG	3 cut(s)	8, 238, 380
BssMI	GATC	7 cut(s)	4, 412, 817, 885, 1300, 1656, 1762
BssT1I	CCWWGG	3 cut(s)	8, 238, 380
Bst2UI	CCWGG	3 cut(s)	158, 565, 1413
Bst4CI	ACNGT	9 cut(s)	115, 742, 794, 812, 968, 1176, 1384, 1521, 1704
Bst6I	CTCTTC	1 cut(s)	711
BstAUI	TGTACA	1 cut(s)	1320
BstBI	TTCGAA	3 cut(s)	131, 1083, 1280
BstC8I	GCNNGC	3 cut(s)	334, 538, 1459
BstDEI	CTNAG	5 cut(s)	394, 876, 954, 1146, 1772
BstENI	CCTNNNNNAGG	1 cut(s)	953
BstF5I	GGATG	4 cut(s)	390, 406, 437, 1435
BstFNI	CGCG	2 cut(s)	862, 916
BstHHI	GCGC	2 cut(s)	88, 862
BstKTI	GATC	7 cut(s)	7, 415, 820, 888, 1303, 1659, 1765
BstMAI	GTCTC	3 cut(s)	206, 716, 968
BstMBI	GATC	7 cut(s)	4, 412, 817, 885, 1300, 1656, 1762
BstMWI	GCNNNNNNNGC	6 cut(s)	30, 342, 500, 683, 692, 1625
BstNI	CCWGG	3 cut(s)	158, 565, 1413
BstNSI	RCATGY	3 cut(s)	423, 785, 1096
BstSCI	CCNGG	3 cut(s)	156, 563, 1411
BstSFI	CTRYAG	1 cut(s)	575
BstSLI	GKGCMC	1 cut(s)	552
BstUI	CGCG	2 cut(s)	862, 916
BstV1I	GCAGC	9 cut(s)	42, 178, 249, 299, 421, 650, 1281, 1321, 1655
BstV2I	GAAGAC	3 cut(s)	675, 1053, 1269
BstX2I	RGATCY	1 cut(s)	4
BstYI	RGATCY	1 cut(s)	4
Bsu15I	ATCGAT	2 cut(s)	820, 1181
BsuRI	GGCC	3 cut(s)	345, 596, 959
BsuTUI	ATCGAT	2 cut(s)	820, 1181
BtsCI	GGATG	4 cut(s)	390, 406, 437, 1435
BtsI	GCAGTG	2 cut(s)	363, 1291
BtsIMutI	CAGTG	6 cut(s)	363, 808, 973, 1291, 1517, 1717
BveI	ACCTGC	1 cut(s)	1148
Cac8I	GCNNGC	3 cut(s)	334, 538, 1459
CaiI	CAGNNNCTG	1 cut(s)	854
CciI	TCATGA	2 cut(s)	64, 223
CfoI	GCGC	2 cut(s)	88, 862
Cfr10I	RCCGGY	1 cut(s)	1007
Cfr13I	GGNCC	2 cut(s)	154, 343
ClaI	ATCGAT	2 cut(s)	820, 1181
CsiI	ACCWGGT	1 cut(s)	563
Csp6I	GTAC	6 cut(s)	205, 795, 880, 1021, 1038, 1321
CviQI	GTAC	6 cut(s)	205, 795, 880, 1021, 1038, 1321
DdeI	CTNAG	5 cut(s)	394, 876, 954, 1146, 1772
DpnI	GATC	7 cut(s)	6, 414, 819, 887, 1302, 1658, 1764
DpnII	GATC	7 cut(s)	4, 412, 817, 885, 1300, 1656, 1762
Eam1104I	CTCTTC	1 cut(s)	711
EarI	CTCTTC	1 cut(s)	711
Ecl136II	GAGCTC	1 cut(s)	1857
Eco130I	CCWWGG	3 cut(s)	8, 238, 380
Eco24I	GRGCYC	1 cut(s)	1859
Eco47I	GGWCC	1 cut(s)	154
Eco53kI	GAGCTC	1 cut(s)	1857
Eco57I	CTGAAG	2 cut(s)	971, 1253
EcoICRI	GAGCTC	1 cut(s)	1857
EcoNI	CCTNNNNNAGG	1 cut(s)	953
EcoRII	CCWGG	3 cut(s)	156, 563, 1411
EcoT14I	CCWWGG	3 cut(s)	8, 238, 380
EcoT38I	GRGCYC	1 cut(s)	1859
ErhI	CCWWGG	3 cut(s)	8, 238, 380
FaqI	GGGAC	2 cut(s)	153, 1690
FbaI	TGATCA	3 cut(s)	412, 885, 1656
FokI	GGATG	4 cut(s)	397, 413, 424, 1442
FriOI	GRGCYC	1 cut(s)	1859
FspBI	CTAG	3 cut(s)	329, 1361, 1724
FspI	TGCGCA	1 cut(s)	87
GlaI	GCGC	2 cut(s)	87, 861
GsuI	CTGGAG	5 cut(s)	179, 201, 672, 876, 1395
HaeIII	GGCC	3 cut(s)	345, 596, 959
HapII	CCGG	1 cut(s)	1008
HhaI	GCGC	2 cut(s)	88, 862
Hin6I	GCGC	2 cut(s)	86, 860
HinP1I	GCGC	2 cut(s)	86, 860
HindIII	AAGCTT	2 cut(s)	228, 762
HinfI	GANTC	8 cut(s)	101, 214, 361, 373, 976, 1085, 1576, 1806
HpaII	CCGG	1 cut(s)	1008
HphI	GGTGA	4 cut(s)	513, 1025, 1038, 1666
Hpy166II	GTNNAC	2 cut(s)	1023, 1046
Hpy188I	TCNGA	5 cut(s)	738, 990, 1090, 1559, 1846
Hpy188III	TCNNGA	7 cut(s)	65, 224, 256, 350, 815, 855, 1427
Hpy8I	GTNNAC	2 cut(s)	1023, 1046
HpyAV	CCTTC	4 cut(s)	68, 115, 636, 815
HpyCH4III	ACNGT	9 cut(s)	115, 742, 794, 812, 968, 1176, 1384, 1521, 1704
HpyF10VI	GCNNNNNNNGC	6 cut(s)	30, 342, 500, 683, 692, 1625
HpyF3I	CTNAG	5 cut(s)	394, 876, 954, 1146, 1772
HspAI	GCGC	2 cut(s)	86, 860
Ksp22I	TGATCA	3 cut(s)	412, 885, 1656
Kzo9I	GATC	7 cut(s)	4, 412, 817, 885, 1300, 1656, 1762
LmnI	GCTCC	3 cut(s)	691, 857, 1433
Lsp1109I	GCAGC	9 cut(s)	42, 178, 249, 299, 421, 650, 1281, 1321, 1655
LweI	GCATC	4 cut(s)	343, 446, 1267, 1743
MabI	ACCWGGT	1 cut(s)	563
MaeI	CTAG	3 cut(s)	329, 1361, 1724
MaeIII	GTNAC	5 cut(s)	567, 827, 1030, 1073, 1384
MalI	GATC	7 cut(s)	6, 414, 819, 887, 1302, 1658, 1764
MboI	GATC	7 cut(s)	4, 412, 817, 885, 1300, 1656, 1762
MboII	GAAGA	5 cut(s)	680, 728, 977, 1053, 1269
MflI	RGATCY	1 cut(s)	4
MhlI	GDGCHC	2 cut(s)	552, 1859
MlyI	GAGTC	2 cut(s)	208, 970
MseI	TTAA	5 cut(s)	168, 426, 909, 1169, 1373
MslI	CAYNNNNRTG	4 cut(s)	69, 351, 1028, 1652
MspA1I	CMGCKG	2 cut(s)	98, 692
MspI	CCGG	1 cut(s)	1008
MspR9I	CCNGG	3 cut(s)	158, 565, 1413
Mva1269I	GAATGC	1 cut(s)	1345
MvaI	CCWGG	3 cut(s)	158, 565, 1413
MvnI	CGCG	2 cut(s)	862, 916
MwoI	GCNNNNNNNGC	6 cut(s)	30, 342, 500, 683, 692, 1625
NdeII	GATC	7 cut(s)	4, 412, 817, 885, 1300, 1656, 1762
NlaIV	GGNNCC	1 cut(s)	6
NmeAIII	GCCGAG	1 cut(s)	1689
NmuCI	GTSAC	1 cut(s)	1030
NsbI	TGCGCA	1 cut(s)	87
NspI	RCATGY	3 cut(s)	423, 785, 1096
NspV	TTCGAA	3 cut(s)	131, 1083, 1280
OliI	CACNNNNGTG	2 cut(s)	1028, 1652
PagI	TCATGA	2 cut(s)	64, 223
PciI	ACATGT	2 cut(s)	419, 1092
PctI	GAATGC	1 cut(s)	1345
PfeI	GAWTC	6 cut(s)	101, 361, 373, 1085, 1576, 1806
PflFI	GACNNNGTC	1 cut(s)	152
PfoI	TCCNGGA	1 cut(s)	156
PleI	GAGTC	2 cut(s)	208, 970
PpsI	GAGTC	2 cut(s)	208, 970
PscI	ACATGT	2 cut(s)	419, 1092
PshBI	ATTAAT	2 cut(s)	426, 909
Psp124BI	GAGCTC	1 cut(s)	1859
Psp6I	CCWGG	3 cut(s)	156, 563, 1411
PspGI	CCWGG	3 cut(s)	156, 563, 1411
PspN4I	GGNNCC	1 cut(s)	6
PspPI	GGNCC	2 cut(s)	154, 343
PstNI	CAGNNNCTG	1 cut(s)	854
PsuI	RGATCY	1 cut(s)	4
PsyI	GACNNNGTC	1 cut(s)	152
PvuII	CAGCTG	1 cut(s)	98
RsaI	GTAC	6 cut(s)	206, 796, 881, 1022, 1039, 1322
RsaNI	GTAC	6 cut(s)	205, 795, 880, 1021, 1038, 1321
RseI	CAYNNNNRTG	4 cut(s)	69, 351, 1028, 1652
SacI	GAGCTC	1 cut(s)	1859
SaqAI	TTAA	5 cut(s)	168, 426, 909, 1169, 1373
Sau3AI	GATC	7 cut(s)	4, 412, 817, 885, 1300, 1656, 1762
Sau96I	GGNCC	2 cut(s)	154, 343
ScaI	AGTACT	3 cut(s)	796, 881, 1039
SchI	GAGTC	2 cut(s)	208, 970
ScrFI	CCNGG	3 cut(s)	158, 565, 1413
SduI	GDGCHC	2 cut(s)	552, 1859
SexAI	ACCWGGT	1 cut(s)	563
SfaNI	GCATC	4 cut(s)	343, 446, 1267, 1743
SfcI	CTRYAG	1 cut(s)	575
SfuI	TTCGAA	3 cut(s)	131, 1083, 1280
SinI	GGWCC	1 cut(s)	154
SmiMI	CAYNNNNRTG	4 cut(s)	69, 351, 1028, 1652
SmlI	CTYRAG	2 cut(s)	209, 282
SmoI	CTYRAG	2 cut(s)	209, 282
SpeI	ACTAGT	1 cut(s)	1360
SsiI	CCGC	4 cut(s)	692, 916, 1416, 1568
SspI	AATATT	2 cut(s)	729, 996
SspMI	CTAG	3 cut(s)	329, 1361, 1724
SstI	GAGCTC	1 cut(s)	1859
StyD4I	CCNGG	3 cut(s)	156, 563, 1411
StyI	CCWWGG	3 cut(s)	8, 238, 380
TaaI	ACNGT	9 cut(s)	115, 742, 794, 812, 968, 1176, 1384, 1521, 1704
TaqI	TCGA	7 cut(s)	54, 131, 820, 1083, 1181, 1280, 1451
TatI	WGTACW	4 cut(s)	794, 879, 1037, 1320
TauI	GCSGC	1 cut(s)	695
TfiI	GAWTC	6 cut(s)	101, 361, 373, 1085, 1576, 1806
Tru1I	TTAA	5 cut(s)	168, 426, 909, 1169, 1373
Tru9I	TTAA	5 cut(s)	168, 426, 909, 1169, 1373
TscAI	CASTG	6 cut(s)	363, 815, 973, 1298, 1524, 1717
TseFI	GTSAC	1 cut(s)	1030
TseI	GCWGC	9 cut(s)	30, 191, 262, 287, 434, 638, 1269, 1309, 1643
Tsp45I	GTSAC	1 cut(s)	1030
TspRI	CASTG	6 cut(s)	363, 815, 973, 1298, 1524, 1717
Tth111I	GACNNNGTC	1 cut(s)	152
VpaK11BI	GGWCC	1 cut(s)	154
VspI	ATTAAT	2 cut(s)	426, 909
XagI	CCTNNNNNAGG	1 cut(s)	953
XapI	RAATTY	3 cut(s)	47, 517, 1840
XceI	RCATGY	3 cut(s)	423, 785, 1096
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1007
XspI	CTAG	3 cut(s)	329, 1361, 1724
ZrmI	AGTACT	3 cut(s)	796, 881, 1039

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.