Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0001176

Physical Location & Seq

Genomic Coordinates Reverse (-)

62581859 .. 62586690

Gene Structure 4832 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G037930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGAATTTGAGAAGCCTTTTTCTGGGGTATGTGGATGCACTGCGGTCCTGTTACCTCACAAGGATTTGTGAAAGCTTGTTTGTACCTGCGTATAGTTTCTGGTCTTCTAGTACCAGAAGCCAGGCTGTTTCTGCGTTTGGAGATTTGCTTTATGTGGTAAAAGCCAAACCCCATGATCGCAGGATGATGTGTGACTCACGGATTGTGCAAACTAAGTTGAGCCAAAATGATTCCCTCTGTAAATATTCTCATTCTAGCATCTCATGTGATTCTGAATTTCAGTCAGAGGTTGTGAAAGATGACTCGTTTTCTAAGGTGAGTAATCCTGATGAAGGTATTGACCGACTTGGATCATGCAATAAAAGTTCATACCCGTACAAGTTCCAGCTTGAACAGGATGTACAAAGATTGGAACAGCAGCTGCTTGAAGAAATAGAGCTACATGCTATTCTGGAAAATGCAATTGAGAAAAATGCTACTAAATTCTCCAGTCCAGCATGCCTTCCTTACAATGCTCAAGAGCTCCTAAGAAATATTGCTGCCCTGGAGGTTACAGTTTCAGAACTAGAACAGGAGTTGGTTGCTTTGCATTTCCAACTAAGTCAAGAAAGAAATGAAAGAAGGCTGGCAGAATATCGTCTGAGGCATCCATCTCCTCAGTCAATGTCTCCTCGCTTGTGTGGTATTATGAGACTGCCGAGTTCATCTCCTTCGAGGTGTACAGAGCAGTCTAGTCCTGAAATTCATCATTATTCAGGAGATGACTCATGGCAGGAGCCACAAGATCAATCATCAGAAACTAGCGGTGAAACATCTTCCATGCAATCAGTAACTGAGATTGCGGTGGACTCAGTTGCATGTGGCCATGATATGAAAAACTGTAGGAAGATGGATCTCGTATCTTTGCAACCTTCTGACTTCAGGAAGCTTCCTAAAGGGATGCCCTCCAAGGGCCTGTGGGATCATCCTAATCAACTGTCAGAGGAGATGGTTAGATGCATGAAAAATATTTTCATATCTTTGGCTGATTCAGCCTTACCGTCAAAATCTTCTTCCCAAGAGAGCCAGTTGTCACCTCTGTCACCACGTGGACATCTTTCTAATTCCTCATGGTGGTCATCATCTGAACGGTCGATGATTTCATCATGGGTACAGAGCCCACAAGTAGATATACAGAGTAACTCTGAAGTATTAGCTTCAGAAAACGCCTGTGATCCCTATAGAGTTCGAGGGAAACTGAGTTGGGCAGACATTGGGAGCTATGGACTAGCAACTGAAGTTTCTTGGATGTCAGTTGGGAAGAAGCAATTAGAATATGCTGCTGGTGCTCTGAGGAGGTTCAGAGTACTTGTGGAGCAACTGGCAAAAGTAAATCCTATCCATTTGAGCTGCAATGAGAAGCTTGCTTTCTGGATTAACTTATATAATGCACTTATCATGCATGCTTACTTGGCTTATGGAGTCCCTAGAAGTGATTTGAAGCTCTTCTCTTTAATGCAAAAGGCAGCTTACACTGTTGGGGGACATTCTTACAGTGCCACTGCTATTGAGTACGTAATTTTGAAGGCGAAACCTCCACTTCATAGACCACAAATTGCTTTGCTTCTTGCCCTTCACAAGCTTAAGGTCTCAGACGAGCAACGGAAGTCTGTAATCGATACATATGAACCACTTATAACCTTTGCTTTAAGCTGTGGAATGTACTCCTCACCGGCGGTAAGGATCTACACTGCTGAAAATGTAAGGGAAGAACTTCAGGAAGCACAGCGTGATTTTGTTCGAGCTTCAGTTGGGGTTAGTAACAAGGGGAGGTTGTTGGTGCCAAAAATGTTGCACTGCTTTGCCAAAGGCTCTGTGGATGATTCAAATTTGGCTGTATGGATATCACATTACCTCCCGCCCCACCAAGCTATCTTTGTTGAGCAATGCATATCACAAAGGCGACAAAGTCTGCTTGGTTCGCGCAACTGTGGCATTTTGCCATTTGATTCACGCTTCCGATACCTATTTCTGCCCGACAAAATTCCATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF547 Lzipper-MIP1

Protein Analysis

677

Amino Acids

76.32

Weight (kDa)

7.24

Isoelectric Point (pI)

70.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lzipper-MIP1	PF14389	126 - 203	4.4e-20	Leucine-zipper of ternary complex factor MIP1
DUF547	PF04784	461 - 593	1.7e-41	Protein of unknown function, DUF547

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001176)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13000 AT3G13000 AT3G13000
fragaria_vesca	FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420
malus_domestica	MD09G1169500.v1.1 MD17G1157700.v1.1
prunus_persica	Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1
pyrus_communis	pycom09g08690 pycom17g15090
rosa_chinensis	RchiOBHm_Chr1g0315101 RchiOBHm_Chr1g0315561 RchiOBHm_Chr1g0322971 RchiOBHm_Chr2g0090201 RchiOBHm_Chr2g0148391 RchiOBHm_Chr5g0049331
rosa_laevigata	RLG00000002464 RLG00000019778 RLG00000020347 RLG00000020398 RLG00000030746
rosa_multiflora	Rmu_co8078922.1_g000001 Rmu_sc0007047.1_g000001 Rmu_sc0009059.1_g000004
rosa_roxburghii	Rroxscaffold_2G00098770
rosa_rugosa	Rorug01G0399600 Rorug02G0406300 Rorug02G0406400 Rorug02G0406500 Rorug02G0406600 Rorug02G0406700
rosa_samantha	Rh1AG015100 Rh1AG015300 Rh2AG465400 Rh2BG478300 Rh2CG451900 Rh2DG487100 Rh4AG101900 Rh4AG113600 Rh4CG175600
rosa_wichuraiana	Rw1G000760 Rw2G037930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1676
Acc36I	ACCTGC	1 cut(s)	94
AccB1I	GGYRCC	1 cut(s)	1819
AccII	CGCG	1 cut(s)	1963
AciI	CCGC	5 cut(s)	43, 804, 842, 1715, 1898
AclWI	GGATC	5 cut(s)	358, 900, 969, 1208, 1730
AcoI	YGGCCR	1 cut(s)	862
AcsI	RAATTY	6 cut(s)	4, 275, 482, 741, 1867, 2022
AcuI	CTGAAG	6 cut(s)	904, 1182, 1206, 1296, 1739, 1770
AcvI	CACGTG	1 cut(s)	1088
AdeI	CACNNNGTG	2 cut(s)	1088, 1769
AfaI	GTAC	9 cut(s)	84, 112, 377, 402, 721, 1152, 1347, 1553, 1703
AfiI	CCNNNNNNNGG	4 cut(s)	22, 332, 950, 1113
AflII	CTTAAG	1 cut(s)	1622
AgsI	TTSAA	5 cut(s)	392, 428, 1480, 1564, 1866
AjnI	CCWGG	2 cut(s)	120, 543
Alw21I	GWGCWC	2 cut(s)	525, 1330
Alw26I	GTCTC	3 cut(s)	672, 685, 1633
AlwI	GGATC	5 cut(s)	358, 900, 969, 1208, 1730
AlwNI	CAGNNNCTG	2 cut(s)	421, 833
AoxI	GGCC	2 cut(s)	862, 952
ApeKI	GCWGC	6 cut(s)	418, 421, 539, 1319, 1389, 1505
ApoI	RAATTY	6 cut(s)	4, 275, 482, 741, 1867, 2022
Asp700I	GAANNNNTTC	2 cut(s)	1484, 1752
AspLEI	GCGC	1 cut(s)	1965
AspS9I	GGNCC	2 cut(s)	45, 952
AsuHPI	GGTGA	5 cut(s)	328, 818, 1065, 1074, 1701
AvaII	GGWCC	1 cut(s)	45
BalI	TGGCCA	1 cut(s)	864
BanI	GGYRCC	1 cut(s)	1819
BanII	GRGCYC	2 cut(s)	525, 1160
BbrPI	CACGTG	1 cut(s)	1088
BbsI	GAAGAC	1 cut(s)	96
Bbv12I	GWGCWC	2 cut(s)	525, 1330
BbvI	GCAGC	6 cut(s)	408, 430, 526, 1306, 1376, 1517
BccI	CCATC	3 cut(s)	658, 883, 982
BciT130I	CCWGG	2 cut(s)	122, 545
BcoDI	GTCTC	3 cut(s)	672, 685, 1633
BfaI	CTAG	7 cut(s)	108, 255, 566, 732, 801, 1268, 1467
BfmI	CTRYAG	2 cut(s)	880, 1219
BfrI	CTTAAG	1 cut(s)	1622
BfuAI	ACCTGC	1 cut(s)	94
BisI	GCNGC	6 cut(s)	419, 422, 540, 1320, 1390, 1506
BlsI	GCNGC	6 cut(s)	420, 423, 541, 1321, 1391, 1507
BmcAI	AGTACT	1 cut(s)	1347
Bme1390I	CCNGG	2 cut(s)	122, 545
Bme18I	GGWCC	1 cut(s)	45
BmgT120I	GGNCC	2 cut(s)	45, 952
BmiI	GGNNCC	2 cut(s)	777, 1821
BmrFI	CCNGG	2 cut(s)	122, 545
BmsI	GCATC	5 cut(s)	25, 267, 655, 930, 986
BpiI	GAAGAC	1 cut(s)	96
BplI	GAGNNNNNCTC	2 cut(s)	691, 723
BpmI	CTGGAG	2 cut(s)	472, 566
BpuEI	CTTGAG	1 cut(s)	501
Bsa29I	ATCGAT	1 cut(s)	1656
BsaAI	YACGTR	2 cut(s)	1088, 1555
BsaI	GGTCTC	1 cut(s)	1633
BsaJI	CCNNGG	2 cut(s)	543, 948
BsaXI	ACNNNNNCTCC	2 cut(s)	1878, 1908
Bsc4I	CCNNNNNNNGG	4 cut(s)	22, 332, 950, 1113
Bse118I	RCCGGY	1 cut(s)	1711
Bse1I	ACTGG	3 cut(s)	489, 1066, 1365
Bse3DI	GCAATG	2 cut(s)	1399, 1931
BseBI	CCWGG	2 cut(s)	122, 545
BseCI	ATCGAT	1 cut(s)	1656
BseDI	CCNNGG	2 cut(s)	543, 948
BseGI	GGATG	8 cut(s)	40, 189, 403, 646, 945, 964, 1293, 1864
BseLI	CCNNNNNNNGG	4 cut(s)	22, 332, 950, 1113
BseMI	GCAATG	2 cut(s)	1399, 1931
BseMII	CTCAG	7 cut(s)	632, 671, 825, 864, 1229, 1322, 1644
BseNI	ACTGG	3 cut(s)	489, 1066, 1365
BseRI	GAGGAG	5 cut(s)	645, 660, 998, 1348, 1696
BseXI	GCAGC	6 cut(s)	408, 430, 526, 1306, 1376, 1517
Bsh1236I	CGCG	1 cut(s)	1963
Bsh1285I	CGRYCG	1 cut(s)	1133
BshFI	GGCC	2 cut(s)	864, 954
BshNI	GGYRCC	1 cut(s)	1819
BshVI	ATCGAT	1 cut(s)	1656
BsiEI	CGRYCG	1 cut(s)	1133
BsiHKAI	GWGCWC	2 cut(s)	525, 1330
BsiSI	CCGG	1 cut(s)	1712
BslFI	GGGAC	2 cut(s)	1448, 1536
BslI	CCNNNNNNNGG	4 cut(s)	22, 332, 950, 1113
BsmAI	GTCTC	3 cut(s)	672, 685, 1633
BsmFI	GGGAC	2 cut(s)	1448, 1536
BsnI	GGCC	2 cut(s)	864, 954
Bso31I	GGTCTC	1 cut(s)	1633
Bsp1286I	GDGCHC	3 cut(s)	525, 1160, 1330
Bsp1407I	TGTACA	2 cut(s)	400, 719
Bsp143I	GATC	7 cut(s)	175, 350, 784, 892, 961, 1213, 1722
BspACI	CCGC	5 cut(s)	43, 804, 842, 1715, 1898
BspANI	GGCC	2 cut(s)	864, 954
BspCNI	CTCAG	7 cut(s)	633, 670, 826, 863, 1230, 1323, 1643
BspDI	ATCGAT	1 cut(s)	1656
BspFNI	CGCG	1 cut(s)	1963
BspLI	GGNNCC	2 cut(s)	777, 1821
BspMI	ACCTGC	1 cut(s)	94
BspPI	GGATC	5 cut(s)	358, 900, 969, 1208, 1730
BspQI	GCTCTTC	1 cut(s)	1490
BspT107I	GGYRCC	1 cut(s)	1819
BspTI	CTTAAG	1 cut(s)	1622
BspTNI	GGTCTC	1 cut(s)	1633
BsrDI	GCAATG	2 cut(s)	1399, 1931
BsrFI	RCCGGY	1 cut(s)	1711
BsrGI	TGTACA	2 cut(s)	400, 719
BsrI	ACTGG	3 cut(s)	489, 1066, 1365
BssAI	RCCGGY	1 cut(s)	1711
BssECI	CCNNGG	2 cut(s)	543, 948
BssMI	GATC	7 cut(s)	175, 350, 784, 892, 961, 1213, 1722
BssT1I	CCWWGG	1 cut(s)	948
Bst2UI	CCWGG	2 cut(s)	122, 545
Bst4CI	ACNGT	8 cut(s)	556, 881, 978, 1041, 1131, 1516, 1535, 1970
Bst6I	CTCTTC	1 cut(s)	1490
BstAFI	CTTAAG	1 cut(s)	1622
BstAUI	TGTACA	2 cut(s)	400, 719
BstBAI	YACGTR	2 cut(s)	1088, 1555
BstC8I	GCNNGC	4 cut(s)	499, 627, 1404, 1443
BstENI	CCTNNNNNAGG	1 cut(s)	330
BstF5I	GGATG	8 cut(s)	40, 189, 403, 646, 945, 964, 1293, 1864
BstFNI	CGCG	1 cut(s)	1963
BstHHI	GCGC	1 cut(s)	1965
BstKTI	GATC	7 cut(s)	178, 353, 787, 895, 964, 1216, 1725
BstMAI	GTCTC	3 cut(s)	672, 685, 1633
BstMBI	GATC	7 cut(s)	175, 350, 784, 892, 961, 1213, 1722
BstMCI	CGRYCG	1 cut(s)	1133
BstMWI	GCNNNNNNNGC	6 cut(s)	131, 1031, 1325, 1451, 1960, 1971
BstNI	CCWGG	2 cut(s)	122, 545
BstNSI	RCATGY	4 cut(s)	446, 501, 861, 1445
BstSCI	CCNGG	2 cut(s)	120, 543
BstSFI	CTRYAG	2 cut(s)	880, 1219
BstSNI	TACGTA	1 cut(s)	1555
BstUI	CGCG	1 cut(s)	1963
BstV1I	GCAGC	6 cut(s)	408, 430, 526, 1306, 1376, 1517
BstV2I	GAAGAC	1 cut(s)	96
BstX2I	RGATCY	2 cut(s)	892, 1722
BstYI	RGATCY	2 cut(s)	892, 1722
Bsu15I	ATCGAT	1 cut(s)	1656
BsuRI	GGCC	2 cut(s)	864, 954
BsuTUI	ATCGAT	1 cut(s)	1656
BtsCI	GGATG	8 cut(s)	40, 189, 403, 646, 945, 964, 1293, 1864
BtsI	GCAGTG	4 cut(s)	38, 1539, 1728, 1834
BtsIMutI	CAGTG	6 cut(s)	38, 1512, 1539, 1540, 1728, 1834
BveI	ACCTGC	1 cut(s)	94
Cac8I	GCNNGC	4 cut(s)	499, 627, 1404, 1443
CaiI	CAGNNNCTG	2 cut(s)	421, 833
CfoI	GCGC	1 cut(s)	1965
Cfr10I	RCCGGY	1 cut(s)	1711
Cfr13I	GGNCC	2 cut(s)	45, 952
ClaI	ATCGAT	1 cut(s)	1656
Csp6I	GTAC	9 cut(s)	83, 111, 376, 401, 720, 1151, 1346, 1552, 1702
CspCI	CAANNNNNGTGG	2 cut(s)	1528, 1563
CviQI	GTAC	9 cut(s)	83, 111, 376, 401, 720, 1151, 1346, 1552, 1702
DpnI	GATC	7 cut(s)	177, 352, 786, 894, 963, 1215, 1724
DpnII	GATC	7 cut(s)	175, 350, 784, 892, 961, 1213, 1722
DraIII	CACNNNGTG	2 cut(s)	1088, 1769
EaeI	YGGCCR	1 cut(s)	862
Eam1104I	CTCTTC	1 cut(s)	1490
EarI	CTCTTC	1 cut(s)	1490
Ecl136II	GAGCTC	1 cut(s)	523
Eco105I	TACGTA	1 cut(s)	1555
Eco130I	CCWWGG	1 cut(s)	948
Eco24I	GRGCYC	2 cut(s)	525, 1160
Eco31I	GGTCTC	1 cut(s)	1633
Eco32I	GATATC	1 cut(s)	1884
Eco47I	GGWCC	1 cut(s)	45
Eco53kI	GAGCTC	1 cut(s)	523
Eco57I	CTGAAG	6 cut(s)	904, 1182, 1206, 1296, 1739, 1770
Eco72I	CACGTG	1 cut(s)	1088
EcoICRI	GAGCTC	1 cut(s)	523
EcoNI	CCTNNNNNAGG	1 cut(s)	330
EcoO109I	RGGNCCY	1 cut(s)	952
EcoRII	CCWGG	2 cut(s)	120, 543
EcoRV	GATATC	1 cut(s)	1884
EcoT14I	CCWWGG	1 cut(s)	948
EcoT22I	ATGCAT	3 cut(s)	1001, 1443, 1931
EcoT38I	GRGCYC	2 cut(s)	525, 1160
ErhI	CCWWGG	1 cut(s)	948
FaqI	GGGAC	2 cut(s)	1448, 1536
FauI	CCCGC	1 cut(s)	1905
FauNDI	CATATG	1 cut(s)	1663
Fnu4HI	GCNGC	6 cut(s)	419, 422, 540, 1320, 1390, 1506
FokI	GGATG	8 cut(s)	47, 196, 410, 633, 951, 952, 1300, 1871
FriOI	GRGCYC	2 cut(s)	525, 1160
Fsp4HI	GCNGC	6 cut(s)	419, 422, 540, 1320, 1390, 1506
FspBI	CTAG	7 cut(s)	108, 255, 566, 732, 801, 1268, 1467
GlaI	GCGC	1 cut(s)	1964
GluI	GCNGC	6 cut(s)	419, 422, 540, 1320, 1390, 1506
GsuI	CTGGAG	2 cut(s)	472, 566
HaeIII	GGCC	2 cut(s)	864, 954
HapII	CCGG	1 cut(s)	1712
HhaI	GCGC	1 cut(s)	1965
Hin6I	GCGC	1 cut(s)	1963
HinP1I	GCGC	1 cut(s)	1963
HindIII	AAGCTT	4 cut(s)	73, 926, 1400, 1619
HpaII	CCGG	1 cut(s)	1712
HphI	GGTGA	5 cut(s)	328, 818, 1065, 1074, 1701
Hpy166II	GTNNAC	3 cut(s)	720, 847, 1091
Hpy188III	TCNNGA	9 cut(s)	326, 452, 518, 605, 737, 756, 922, 1411, 1757
Hpy8I	GTNNAC	3 cut(s)	720, 847, 1091
HpyAV	CCTTC	7 cut(s)	326, 512, 615, 720, 921, 1558, 1622
HpyCH4III	ACNGT	8 cut(s)	556, 881, 978, 1041, 1131, 1516, 1535, 1970
HpyCH4IV	ACGT	2 cut(s)	1087, 1554
HpyF10VI	GCNNNNNNNGC	6 cut(s)	131, 1031, 1325, 1451, 1960, 1971
HpySE526I	ACGT	2 cut(s)	1087, 1554
HspAI	GCGC	1 cut(s)	1963
Kzo9I	GATC	7 cut(s)	175, 350, 784, 892, 961, 1213, 1722
LguI	GCTCTTC	1 cut(s)	1490
LmnI	GCTCC	4 cut(s)	528, 775, 1257, 1354
Lsp1109I	GCAGC	6 cut(s)	408, 430, 526, 1306, 1376, 1517
LweI	GCATC	5 cut(s)	25, 267, 655, 930, 986
MaeI	CTAG	7 cut(s)	108, 255, 566, 732, 801, 1268, 1467
MaeII	ACGT	2 cut(s)	1087, 1554
MaeIII	GTNAC	8 cut(s)	50, 191, 550, 829, 1071, 1080, 1178, 1799
MalI	GATC	7 cut(s)	177, 352, 786, 894, 963, 1215, 1724
MboI	GATC	7 cut(s)	175, 350, 784, 892, 961, 1213, 1722
MboII	GAAGA	9 cut(s)	96, 440, 807, 898, 1041, 1044, 1312, 1477, 1760
MfeI	CAATTG	1 cut(s)	462
MflI	RGATCY	2 cut(s)	892, 1722
MhlI	GDGCHC	3 cut(s)	525, 1160, 1330
MlsI	TGGCCA	1 cut(s)	864
MluNI	TGGCCA	1 cut(s)	864
MlyI	GAGTC	5 cut(s)	188, 296, 758, 842, 1470
MmeI	TCCRAC	1 cut(s)	619
Mox20I	TGGCCA	1 cut(s)	864
Mph1103I	ATGCAT	3 cut(s)	1001, 1443, 1931
MroXI	GAANNNNTTC	2 cut(s)	1484, 1752
MscI	TGGCCA	1 cut(s)	864
MseI	TTAA	4 cut(s)	1416, 1493, 1623, 1688
Msp20I	TGGCCA	1 cut(s)	864
MspA1I	CMGCKG	1 cut(s)	421
MspCI	CTTAAG	1 cut(s)	1622
MspI	CCGG	1 cut(s)	1712
MspR9I	CCNGG	2 cut(s)	122, 545
MunI	CAATTG	1 cut(s)	462
MvaI	CCWGG	2 cut(s)	122, 545
MvnI	CGCG	1 cut(s)	1963
MwoI	GCNNNNNNNGC	6 cut(s)	131, 1031, 1325, 1451, 1960, 1971
NdeI	CATATG	1 cut(s)	1663
NdeII	GATC	7 cut(s)	175, 350, 784, 892, 961, 1213, 1722
NlaIV	GGNNCC	2 cut(s)	777, 1821
NmeAIII	GCCGAG	1 cut(s)	723
NmuCI	GTSAC	3 cut(s)	191, 1071, 1080
NsiI	ATGCAT	3 cut(s)	1001, 1443, 1931
NspI	RCATGY	4 cut(s)	446, 501, 861, 1445
PaeI	GCATGC	2 cut(s)	501, 1445
PciSI	GCTCTTC	1 cut(s)	1490
PdmI	GAANNNNTTC	2 cut(s)	1484, 1752
PfeI	GAWTC	5 cut(s)	230, 269, 1028, 1862, 1988
PflFI	GACNNNGTC	1 cut(s)	1947
PkrI	GCNGC	6 cut(s)	420, 423, 541, 1321, 1391, 1507
PleI	GAGTC	5 cut(s)	188, 296, 758, 842, 1469
PmaCI	CACGTG	1 cut(s)	1088
PmlI	CACGTG	1 cut(s)	1088
PpsI	GAGTC	5 cut(s)	188, 296, 758, 842, 1469
Ppu21I	YACGTR	2 cut(s)	1088, 1555
PsiI	TTATAA	1 cut(s)	1676
Psp124BI	GAGCTC	1 cut(s)	525
Psp6I	CCWGG	2 cut(s)	120, 543
PspCI	CACGTG	1 cut(s)	1088
PspGI	CCWGG	2 cut(s)	120, 543
PspN4I	GGNNCC	2 cut(s)	777, 1821
PspPI	GGNCC	2 cut(s)	45, 952
PsrI	GAACNNNNNNTAC	2 cut(s)	384, 416
PstNI	CAGNNNCTG	2 cut(s)	421, 833
PsuI	RGATCY	2 cut(s)	892, 1722
PsyI	GACNNNGTC	1 cut(s)	1947
PvuII	CAGCTG	1 cut(s)	421
RsaI	GTAC	9 cut(s)	84, 112, 377, 402, 721, 1152, 1347, 1553, 1703
RsaNI	GTAC	9 cut(s)	83, 111, 376, 401, 720, 1151, 1346, 1552, 1702
SacI	GAGCTC	1 cut(s)	525
SapI	GCTCTTC	1 cut(s)	1490
SaqAI	TTAA	4 cut(s)	1416, 1493, 1623, 1688
SatI	GCNGC	6 cut(s)	419, 422, 540, 1320, 1390, 1506
Sau3AI	GATC	7 cut(s)	175, 350, 784, 892, 961, 1213, 1722
Sau96I	GGNCC	2 cut(s)	45, 952
ScaI	AGTACT	1 cut(s)	1347
SchI	GAGTC	5 cut(s)	188, 296, 758, 842, 1470
ScrFI	CCNGG	2 cut(s)	122, 545
SduI	GDGCHC	3 cut(s)	525, 1160, 1330
SfaNI	GCATC	5 cut(s)	25, 267, 655, 930, 986
SfcI	CTRYAG	2 cut(s)	880, 1219
SgrAI	CRCCGGYG	1 cut(s)	1711
SinI	GGWCC	1 cut(s)	45
SmlI	CTYRAG	2 cut(s)	516, 1622
SmoI	CTYRAG	2 cut(s)	516, 1622
SnaBI	TACGTA	1 cut(s)	1555
SphI	GCATGC	2 cut(s)	501, 1445
SsiI	CCGC	5 cut(s)	43, 804, 842, 1715, 1898
SspI	AATATT	3 cut(s)	245, 535, 1009
SspMI	CTAG	7 cut(s)	108, 255, 566, 732, 801, 1268, 1467
SstI	GAGCTC	1 cut(s)	525
StyD4I	CCNGG	2 cut(s)	120, 543
StyI	CCWWGG	1 cut(s)	948
TaaI	ACNGT	8 cut(s)	556, 881, 978, 1041, 1131, 1516, 1535, 1970
TaiI	ACGT	2 cut(s)	1090, 1557
TaqI	TCGA	5 cut(s)	713, 1133, 1228, 1656, 1780
TaqII	GACCGA	1 cut(s)	357
TatI	WGTACW	4 cut(s)	400, 719, 1345, 1701
TfiI	GAWTC	5 cut(s)	230, 269, 1028, 1862, 1988
Tru1I	TTAA	4 cut(s)	1416, 1493, 1623, 1688
Tru9I	TTAA	4 cut(s)	1416, 1493, 1623, 1688
TscAI	CASTG	6 cut(s)	45, 1519, 1540, 1546, 1735, 1841
TseFI	GTSAC	3 cut(s)	191, 1071, 1080
TseI	GCWGC	6 cut(s)	418, 421, 539, 1319, 1389, 1505
Tsp45I	GTSAC	3 cut(s)	191, 1071, 1080
TspGWI	ACGGA	2 cut(s)	214, 1657
TspRI	CASTG	6 cut(s)	45, 1519, 1540, 1546, 1735, 1841
Tth111I	GACNNNGTC	1 cut(s)	1947
Vha464I	CTTAAG	1 cut(s)	1622
VpaK11BI	GGWCC	1 cut(s)	45
XagI	CCTNNNNNAGG	1 cut(s)	330
XapI	RAATTY	6 cut(s)	4, 275, 482, 741, 1867, 2022
XceI	RCATGY	4 cut(s)	446, 501, 861, 1445
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1852
XmnI	GAANNNNTTC	2 cut(s)	1484, 1752
XspI	CTAG	7 cut(s)	108, 255, 566, 732, 801, 1268, 1467
ZrmI	AGTACT	1 cut(s)	1347
Zsp2I	ATGCAT	3 cut(s)	1001, 1443, 1931

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.