Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0001176

Physical Location & Seq

Genomic Coordinates Reverse (-)

61324949 .. 61331569

Gene Structure 6621 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG451900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGATGTGTGACTCACCGATTGTGCAAACTAAGTTGAGCCAAAATGATTCCCTCTATAAATATTCTCATTCTAGCATCTCATGTGATTCTGAATTTCAGTCAGAGGTTGTGAAAGATGACTCGTTTTCTAAGGTGAGTAATCCTGATGAAGGTATTGAACGACTTGGATCATGCAATAAAAGTTCATACCCGTACAAGTTCCAGCTTGAACAGGATGTACAAAGATTGGAACAGCAGCTGCTTGAAGAAATAGAGCTACATGCTATTCTGGAAAATGCAATTGAGAAAAATGCTACTAAATTCTCCAGTCCAGCATGCCTTCCTTACAATGCTCAAGAGCTCCTAAGCAATATTGCTGCCCTGGAGGTTACAGTTTCAGAACTAGAACAGGAGTTGGTTGCTTTGCATTTCCAACTAAGTCAAGAAAGAAATGAAAGAAGGCTGGCAGAATATCGTCTGAGGCATCCATCTCCTCAGTCAATGTCTCCTCGCTTGTGTGGTATTATGAAACTGCCGAGTTCATCTCCTTCGAGGTGTACAGAGCAGTCTAGTCCTGATCATCATTATTCAGGAGATGACTCATGGCAGGAGCCACAAGATCAATCATCAGAAACTAGCGGTGAAACATCTTCCATGCAATCAGTAACTGAGAATGCGGTGGACTCAGTTGCATGTGGCCATGATATGAAAAACTGTAGGAAGATGGATCTCGTATCTTTGCAACCTTCTGACTTCAGGAAGCTTCCTAAAGGGATGCCCTCCAAGGGCCTGTGGGATCATCCTAATCAACTGTCAGAGGAAATGGTTAGATGCATGAAAAATATTTTCATATCTTTGGCTGATTCAGCCTTACCGTCAAAATCTTCTTCCCAAGAGAGCCAGTTGTCACCTCTGTCACCACGTGGACATCTTTCTAATTCCTCATGGTGGTCATCATCTGAACGGTCGATGATTTCATCATGGGTACAGAGCCCACAAGTAGATATACAGAGTAACTCTGAAGTATTAGCTTCAGAAAACGCCTGTGATCCCTATAGAGTTCGAGGGAAACTGAGTTGGGCAGACATTGGGAGCTATGGACTAGCAACTGAAGTTTCTTGGATGTCAGTTGGGAAGAAGCAATTAGAATATGCTGCTGGTGCTCTGAGGAGGTTCAGAGTACTTGTGGAGCAACTGGCAAAAGTAAATCCTATCCATTTGAGCTGCAATGAGAAGCTTGCTTTCTGGATTAACTTATATAATGCACTTATCATGCATGCTTACTTGGCTTATGGAGTCCCTAGAAGTGATTTGAAGCTCTTCTCTTTAATGCAAAAGGCAGCTTACACTGTTGGGGGACATTCTTACAGTGCCACTGCTATTGAGTATGTAATTTTGAAGGCGAAACCTCCACTTCATAGACCACAAATTGCTTTGCTTCTTGCCCTTCACAAGCTTAAGGTCTCAGACGAGCAACGGAAGTCTGTAATCGATACATATGAACCACTTGTAACCTTTGCTTTAAGCTGTGGAATGTACTCCTCACCGGCGGTAAGGATCTACACTGCTGAAAATGTAAGGGAAGAACTTCAGGAAGCACAGCATGATTTTGTTCGAGCTTCAGTTGGGGTTAGTAACAAGGGGAGGTTGTTGGTGCCAAAAATGTTGCACTGCTTTGCCAAAGGCTCTGTGGATGATTCAAATTTGGCTGTATGGATATCACATTACCTCCCGCCCCACCAAGCTATCTTTGTTGAGCAATGCATATCACAAAGGCGACAAAGTCTGCTTGGTTCGCGCAACTGTGGCATTTTGCCATTTGATTCACGCTTCCGATACCTATTTCTGCCCGACAAAATTCCATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF547 Lzipper-MIP1

Protein Analysis

615

Amino Acids

69.1

Weight (kDa)

6.24

Isoelectric Point (pI)

70.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lzipper-MIP1	PF14389	65 - 142	3.6e-20	Leucine-zipper of ternary complex factor MIP1
DUF547	PF04784	399 - 531	4e-41	Protein of unknown function, DUF547

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001176)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13000 AT3G13000 AT3G13000
fragaria_vesca	FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420 FvH4_6g36420
malus_domestica	MD09G1169500.v1.1 MD17G1157700.v1.1
prunus_persica	Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1 Prupe.3G027500_v2.0.a1
pyrus_communis	pycom09g08690 pycom17g15090
rosa_chinensis	RchiOBHm_Chr1g0315101 RchiOBHm_Chr1g0315561 RchiOBHm_Chr1g0322971 RchiOBHm_Chr2g0090201 RchiOBHm_Chr2g0148391 RchiOBHm_Chr5g0049331
rosa_laevigata	RLG00000002464 RLG00000019778 RLG00000020347 RLG00000020398 RLG00000030746
rosa_multiflora	Rmu_co8078922.1_g000001 Rmu_sc0007047.1_g000001 Rmu_sc0009059.1_g000004
rosa_roxburghii	Rroxscaffold_2G00098770
rosa_rugosa	Rorug01G0399600 Rorug02G0406300 Rorug02G0406400 Rorug02G0406500 Rorug02G0406600 Rorug02G0406700
rosa_samantha	Rh1AG015100 Rh1AG015300 Rh2AG465400 Rh2BG478300 Rh2CG451900 Rh2DG487100 Rh4AG101900 Rh4AG113600 Rh4CG175600
rosa_wichuraiana	Rw1G000760 Rw2G037930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1633
AccII	CGCG	1 cut(s)	1777
AciI	CCGC	4 cut(s)	618, 656, 1529, 1712
AclWI	GGATC	5 cut(s)	175, 714, 783, 1022, 1544
AcoI	YGGCCR	1 cut(s)	676
AcsI	RAATTY	4 cut(s)	92, 299, 1681, 1836
AcuI	CTGAAG	6 cut(s)	718, 996, 1020, 1110, 1553, 1584
AcvI	CACGTG	1 cut(s)	902
AdeI	CACNNNGTG	1 cut(s)	902
AfaI	GTAC	6 cut(s)	194, 219, 538, 966, 1161, 1517
AfiI	CCNNNNNNNGG	3 cut(s)	149, 764, 927
AflII	CTTAAG	1 cut(s)	1436
AgsI	TTSAA	6 cut(s)	158, 209, 245, 1294, 1378, 1680
AjnI	CCWGG	1 cut(s)	360
Alw21I	GWGCWC	2 cut(s)	342, 1144
Alw26I	GTCTC	2 cut(s)	489, 1447
AlwI	GGATC	5 cut(s)	175, 714, 783, 1022, 1544
AlwNI	CAGNNNCTG	2 cut(s)	238, 647
AoxI	GGCC	2 cut(s)	676, 766
ApeKI	GCWGC	6 cut(s)	235, 238, 356, 1133, 1203, 1319
ApoI	RAATTY	4 cut(s)	92, 299, 1681, 1836
Asp700I	GAANNNNTTC	2 cut(s)	1298, 1566
AspLEI	GCGC	1 cut(s)	1779
AspS9I	GGNCC	1 cut(s)	766
AsuHPI	GGTGA	6 cut(s)	6, 145, 632, 879, 888, 1515
BalI	TGGCCA	1 cut(s)	678
BanI	GGYRCC	1 cut(s)	1633
BanII	GRGCYC	2 cut(s)	342, 974
BbrPI	CACGTG	1 cut(s)	902
Bbv12I	GWGCWC	2 cut(s)	342, 1144
BbvI	GCAGC	6 cut(s)	225, 247, 343, 1120, 1190, 1331
BccI	CCATC	2 cut(s)	475, 697
BciT130I	CCWGG	1 cut(s)	362
BclI	TGATCA	1 cut(s)	556
BcoDI	GTCTC	2 cut(s)	489, 1447
BfaI	CTAG	6 cut(s)	72, 383, 549, 615, 1082, 1281
BfmI	CTRYAG	2 cut(s)	694, 1033
BfrI	CTTAAG	1 cut(s)	1436
BisI	GCNGC	6 cut(s)	236, 239, 357, 1134, 1204, 1320
BlsI	GCNGC	6 cut(s)	237, 240, 358, 1135, 1205, 1321
BmcAI	AGTACT	1 cut(s)	1161
Bme1390I	CCNGG	1 cut(s)	362
BmgT120I	GGNCC	1 cut(s)	766
BmiI	GGNNCC	2 cut(s)	591, 1635
BmrFI	CCNGG	1 cut(s)	362
BmsI	GCATC	4 cut(s)	84, 472, 744, 800
BplI	GAGNNNNNCTC	2 cut(s)	508, 540
BpmI	CTGGAG	2 cut(s)	289, 383
Bpu10I	CCTNAGC	1 cut(s)	344
BpuEI	CTTGAG	1 cut(s)	318
Bsa29I	ATCGAT	1 cut(s)	1470
BsaAI	YACGTR	1 cut(s)	902
BsaI	GGTCTC	1 cut(s)	1447
BsaJI	CCNNGG	2 cut(s)	360, 762
BsaXI	ACNNNNNCTCC	2 cut(s)	1692, 1722
Bsc4I	CCNNNNNNNGG	3 cut(s)	149, 764, 927
Bse118I	RCCGGY	1 cut(s)	1525
Bse1I	ACTGG	3 cut(s)	306, 880, 1179
Bse3DI	GCAATG	2 cut(s)	1213, 1745
BseBI	CCWGG	1 cut(s)	362
BseCI	ATCGAT	1 cut(s)	1470
BseDI	CCNNGG	2 cut(s)	360, 762
BseGI	GGATG	6 cut(s)	220, 463, 759, 778, 1107, 1678
BseLI	CCNNNNNNNGG	3 cut(s)	149, 764, 927
BseMI	GCAATG	2 cut(s)	1213, 1745
BseMII	CTCAG	7 cut(s)	449, 488, 639, 678, 1043, 1136, 1458
BseNI	ACTGG	3 cut(s)	306, 880, 1179
BseRI	GAGGAG	4 cut(s)	462, 477, 1162, 1510
BseXI	GCAGC	6 cut(s)	225, 247, 343, 1120, 1190, 1331
Bsh1236I	CGCG	1 cut(s)	1777
Bsh1285I	CGRYCG	1 cut(s)	947
BshFI	GGCC	2 cut(s)	678, 768
BshNI	GGYRCC	1 cut(s)	1633
BshVI	ATCGAT	1 cut(s)	1470
BsiEI	CGRYCG	1 cut(s)	947
BsiHKAI	GWGCWC	2 cut(s)	342, 1144
BsiSI	CCGG	1 cut(s)	1526
BslFI	GGGAC	2 cut(s)	1262, 1350
BslI	CCNNNNNNNGG	3 cut(s)	149, 764, 927
BsmAI	GTCTC	2 cut(s)	489, 1447
BsmFI	GGGAC	2 cut(s)	1262, 1350
BsmI	GAATGC	1 cut(s)	658
BsnI	GGCC	2 cut(s)	678, 768
Bso31I	GGTCTC	1 cut(s)	1447
Bsp1286I	GDGCHC	3 cut(s)	342, 974, 1144
Bsp1407I	TGTACA	2 cut(s)	217, 536
Bsp143I	GATC	7 cut(s)	167, 556, 598, 706, 775, 1027, 1536
BspACI	CCGC	4 cut(s)	618, 656, 1529, 1712
BspANI	GGCC	2 cut(s)	678, 768
BspCNI	CTCAG	7 cut(s)	450, 487, 640, 677, 1044, 1137, 1457
BspDI	ATCGAT	1 cut(s)	1470
BspFNI	CGCG	1 cut(s)	1777
BspLI	GGNNCC	2 cut(s)	591, 1635
BspPI	GGATC	5 cut(s)	175, 714, 783, 1022, 1544
BspQI	GCTCTTC	1 cut(s)	1304
BspT107I	GGYRCC	1 cut(s)	1633
BspTI	CTTAAG	1 cut(s)	1436
BspTNI	GGTCTC	1 cut(s)	1447
BsrDI	GCAATG	2 cut(s)	1213, 1745
BsrFI	RCCGGY	1 cut(s)	1525
BsrGI	TGTACA	2 cut(s)	217, 536
BsrI	ACTGG	3 cut(s)	306, 880, 1179
BssAI	RCCGGY	1 cut(s)	1525
BssECI	CCNNGG	2 cut(s)	360, 762
BssMI	GATC	7 cut(s)	167, 556, 598, 706, 775, 1027, 1536
BssT1I	CCWWGG	1 cut(s)	762
Bst2UI	CCWGG	1 cut(s)	362
Bst4CI	ACNGT	8 cut(s)	373, 695, 792, 855, 945, 1330, 1349, 1784
Bst6I	CTCTTC	1 cut(s)	1304
BstAFI	CTTAAG	1 cut(s)	1436
BstAUI	TGTACA	2 cut(s)	217, 536
BstBAI	YACGTR	1 cut(s)	902
BstC8I	GCNNGC	4 cut(s)	316, 444, 1218, 1257
BstENI	CCTNNNNNAGG	1 cut(s)	147
BstF5I	GGATG	6 cut(s)	220, 463, 759, 778, 1107, 1678
BstFNI	CGCG	1 cut(s)	1777
BstHHI	GCGC	1 cut(s)	1779
BstKTI	GATC	7 cut(s)	170, 559, 601, 709, 778, 1030, 1539
BstMAI	GTCTC	2 cut(s)	489, 1447
BstMBI	GATC	7 cut(s)	167, 556, 598, 706, 775, 1027, 1536
BstMCI	CGRYCG	1 cut(s)	947
BstMWI	GCNNNNNNNGC	5 cut(s)	845, 1139, 1265, 1774, 1785
BstNI	CCWGG	1 cut(s)	362
BstNSI	RCATGY	4 cut(s)	263, 318, 675, 1259
BstSCI	CCNGG	1 cut(s)	360
BstSFI	CTRYAG	2 cut(s)	694, 1033
BstUI	CGCG	1 cut(s)	1777
BstV1I	GCAGC	6 cut(s)	225, 247, 343, 1120, 1190, 1331
BstX2I	RGATCY	2 cut(s)	706, 1536
BstYI	RGATCY	2 cut(s)	706, 1536
Bsu15I	ATCGAT	1 cut(s)	1470
BsuRI	GGCC	2 cut(s)	678, 768
BsuTUI	ATCGAT	1 cut(s)	1470
BtsCI	GGATG	6 cut(s)	220, 463, 759, 778, 1107, 1678
BtsI	GCAGTG	3 cut(s)	1353, 1542, 1648
BtsIMutI	CAGTG	5 cut(s)	1326, 1353, 1354, 1542, 1648
Cac8I	GCNNGC	4 cut(s)	316, 444, 1218, 1257
CaiI	CAGNNNCTG	2 cut(s)	238, 647
CfoI	GCGC	1 cut(s)	1779
Cfr10I	RCCGGY	1 cut(s)	1525
Cfr13I	GGNCC	1 cut(s)	766
ClaI	ATCGAT	1 cut(s)	1470
Csp6I	GTAC	6 cut(s)	193, 218, 537, 965, 1160, 1516
CspCI	CAANNNNNGTGG	2 cut(s)	1342, 1377
CviQI	GTAC	6 cut(s)	193, 218, 537, 965, 1160, 1516
DpnI	GATC	7 cut(s)	169, 558, 600, 708, 777, 1029, 1538
DpnII	GATC	7 cut(s)	167, 556, 598, 706, 775, 1027, 1536
DraIII	CACNNNGTG	1 cut(s)	902
EaeI	YGGCCR	1 cut(s)	676
Eam1104I	CTCTTC	1 cut(s)	1304
EarI	CTCTTC	1 cut(s)	1304
Ecl136II	GAGCTC	1 cut(s)	340
Eco130I	CCWWGG	1 cut(s)	762
Eco24I	GRGCYC	2 cut(s)	342, 974
Eco31I	GGTCTC	1 cut(s)	1447
Eco32I	GATATC	1 cut(s)	1698
Eco53kI	GAGCTC	1 cut(s)	340
Eco57I	CTGAAG	6 cut(s)	718, 996, 1020, 1110, 1553, 1584
Eco72I	CACGTG	1 cut(s)	902
EcoICRI	GAGCTC	1 cut(s)	340
EcoNI	CCTNNNNNAGG	1 cut(s)	147
EcoO109I	RGGNCCY	1 cut(s)	766
EcoRII	CCWGG	1 cut(s)	360
EcoRV	GATATC	1 cut(s)	1698
EcoT14I	CCWWGG	1 cut(s)	762
EcoT22I	ATGCAT	3 cut(s)	815, 1257, 1745
EcoT38I	GRGCYC	2 cut(s)	342, 974
ErhI	CCWWGG	1 cut(s)	762
FaqI	GGGAC	2 cut(s)	1262, 1350
FauI	CCCGC	1 cut(s)	1719
FauNDI	CATATG	1 cut(s)	1477
FbaI	TGATCA	1 cut(s)	556
Fnu4HI	GCNGC	6 cut(s)	236, 239, 357, 1134, 1204, 1320
FokI	GGATG	6 cut(s)	227, 450, 765, 766, 1114, 1685
FriOI	GRGCYC	2 cut(s)	342, 974
Fsp4HI	GCNGC	6 cut(s)	236, 239, 357, 1134, 1204, 1320
FspBI	CTAG	6 cut(s)	72, 383, 549, 615, 1082, 1281
GlaI	GCGC	1 cut(s)	1778
GluI	GCNGC	6 cut(s)	236, 239, 357, 1134, 1204, 1320
GsuI	CTGGAG	2 cut(s)	289, 383
HaeIII	GGCC	2 cut(s)	678, 768
HapII	CCGG	1 cut(s)	1526
HhaI	GCGC	1 cut(s)	1779
Hin6I	GCGC	1 cut(s)	1777
HinP1I	GCGC	1 cut(s)	1777
HindIII	AAGCTT	3 cut(s)	740, 1214, 1433
HpaII	CCGG	1 cut(s)	1526
HphI	GGTGA	6 cut(s)	6, 145, 632, 879, 888, 1515
Hpy166II	GTNNAC	3 cut(s)	537, 661, 905
Hpy188III	TCNNGA	9 cut(s)	143, 269, 335, 422, 554, 570, 736, 1225, 1571
Hpy8I	GTNNAC	3 cut(s)	537, 661, 905
HpyAV	CCTTC	7 cut(s)	143, 329, 432, 537, 735, 1372, 1436
HpyCH4III	ACNGT	8 cut(s)	373, 695, 792, 855, 945, 1330, 1349, 1784
HpyCH4IV	ACGT	1 cut(s)	901
HpyF10VI	GCNNNNNNNGC	5 cut(s)	845, 1139, 1265, 1774, 1785
HpySE526I	ACGT	1 cut(s)	901
HspAI	GCGC	1 cut(s)	1777
Ksp22I	TGATCA	1 cut(s)	556
Kzo9I	GATC	7 cut(s)	167, 556, 598, 706, 775, 1027, 1536
LguI	GCTCTTC	1 cut(s)	1304
LmnI	GCTCC	4 cut(s)	345, 589, 1071, 1168
Lsp1109I	GCAGC	6 cut(s)	225, 247, 343, 1120, 1190, 1331
LweI	GCATC	4 cut(s)	84, 472, 744, 800
MaeI	CTAG	6 cut(s)	72, 383, 549, 615, 1082, 1281
MaeII	ACGT	1 cut(s)	901
MaeIII	GTNAC	8 cut(s)	8, 367, 643, 885, 894, 992, 1489, 1613
MalI	GATC	7 cut(s)	169, 558, 600, 708, 777, 1029, 1538
MboI	GATC	7 cut(s)	167, 556, 598, 706, 775, 1027, 1536
MboII	GAAGA	8 cut(s)	257, 621, 712, 855, 858, 1126, 1291, 1574
MfeI	CAATTG	1 cut(s)	279
MflI	RGATCY	2 cut(s)	706, 1536
MhlI	GDGCHC	3 cut(s)	342, 974, 1144
MlsI	TGGCCA	1 cut(s)	678
MluCI	AATT	9 cut(s)	92, 279, 299, 916, 1121, 1371, 1407, 1681, 1836
MluNI	TGGCCA	1 cut(s)	678
MlyI	GAGTC	5 cut(s)	5, 113, 572, 656, 1284
MmeI	TCCRAC	1 cut(s)	436
Mox20I	TGGCCA	1 cut(s)	678
Mph1103I	ATGCAT	3 cut(s)	815, 1257, 1745
MroXI	GAANNNNTTC	2 cut(s)	1298, 1566
MscI	TGGCCA	1 cut(s)	678
MseI	TTAA	4 cut(s)	1230, 1307, 1437, 1502
Msp20I	TGGCCA	1 cut(s)	678
MspA1I	CMGCKG	1 cut(s)	238
MspCI	CTTAAG	1 cut(s)	1436
MspI	CCGG	1 cut(s)	1526
MspR9I	CCNGG	1 cut(s)	362
MunI	CAATTG	1 cut(s)	279
Mva1269I	GAATGC	1 cut(s)	658
MvaI	CCWGG	1 cut(s)	362
MvnI	CGCG	1 cut(s)	1777
MwoI	GCNNNNNNNGC	5 cut(s)	845, 1139, 1265, 1774, 1785
NdeI	CATATG	1 cut(s)	1477
NdeII	GATC	7 cut(s)	167, 556, 598, 706, 775, 1027, 1536
NlaIV	GGNNCC	2 cut(s)	591, 1635
NmeAIII	GCCGAG	1 cut(s)	540
NmuCI	GTSAC	3 cut(s)	8, 885, 894
NsiI	ATGCAT	3 cut(s)	815, 1257, 1745
NspI	RCATGY	4 cut(s)	263, 318, 675, 1259
PaeI	GCATGC	2 cut(s)	318, 1259
PciSI	GCTCTTC	1 cut(s)	1304
PctI	GAATGC	1 cut(s)	658
PdmI	GAANNNNTTC	2 cut(s)	1298, 1566
PfeI	GAWTC	5 cut(s)	47, 86, 842, 1676, 1802
PflFI	GACNNNGTC	1 cut(s)	1761
PkrI	GCNGC	6 cut(s)	237, 240, 358, 1135, 1205, 1321
PleI	GAGTC	5 cut(s)	5, 113, 572, 656, 1283
PmaCI	CACGTG	1 cut(s)	902
PmlI	CACGTG	1 cut(s)	902
PpsI	GAGTC	5 cut(s)	5, 113, 572, 656, 1283
Ppu21I	YACGTR	1 cut(s)	902
Psp124BI	GAGCTC	1 cut(s)	342
Psp6I	CCWGG	1 cut(s)	360
PspCI	CACGTG	1 cut(s)	902
PspGI	CCWGG	1 cut(s)	360
PspN4I	GGNNCC	2 cut(s)	591, 1635
PspPI	GGNCC	1 cut(s)	766
PsrI	GAACNNNNNNTAC	2 cut(s)	201, 233
PstNI	CAGNNNCTG	2 cut(s)	238, 647
PsuI	RGATCY	2 cut(s)	706, 1536
PsyI	GACNNNGTC	1 cut(s)	1761
PvuII	CAGCTG	1 cut(s)	238
RsaI	GTAC	6 cut(s)	194, 219, 538, 966, 1161, 1517
RsaNI	GTAC	6 cut(s)	193, 218, 537, 965, 1160, 1516
SacI	GAGCTC	1 cut(s)	342
SapI	GCTCTTC	1 cut(s)	1304
SaqAI	TTAA	4 cut(s)	1230, 1307, 1437, 1502
SatI	GCNGC	6 cut(s)	236, 239, 357, 1134, 1204, 1320
Sau3AI	GATC	7 cut(s)	167, 556, 598, 706, 775, 1027, 1536
Sau96I	GGNCC	1 cut(s)	766
ScaI	AGTACT	1 cut(s)	1161
SchI	GAGTC	5 cut(s)	5, 113, 572, 656, 1284
ScrFI	CCNGG	1 cut(s)	362
SduI	GDGCHC	3 cut(s)	342, 974, 1144
SfaNI	GCATC	4 cut(s)	84, 472, 744, 800
SfcI	CTRYAG	2 cut(s)	694, 1033
SgrAI	CRCCGGYG	1 cut(s)	1525
SmlI	CTYRAG	2 cut(s)	333, 1436
SmoI	CTYRAG	2 cut(s)	333, 1436
SphI	GCATGC	2 cut(s)	318, 1259
Sse9I	AATT	9 cut(s)	92, 279, 299, 916, 1121, 1371, 1407, 1681, 1836
SsiI	CCGC	4 cut(s)	618, 656, 1529, 1712
SspI	AATATT	3 cut(s)	62, 352, 823
SspMI	CTAG	6 cut(s)	72, 383, 549, 615, 1082, 1281
SstI	GAGCTC	1 cut(s)	342
StyD4I	CCNGG	1 cut(s)	360
StyI	CCWWGG	1 cut(s)	762
TaaI	ACNGT	8 cut(s)	373, 695, 792, 855, 945, 1330, 1349, 1784
TaiI	ACGT	1 cut(s)	904
TaqI	TCGA	5 cut(s)	530, 947, 1042, 1470, 1594
TasI	AATT	9 cut(s)	92, 279, 299, 916, 1121, 1371, 1407, 1681, 1836
TatI	WGTACW	4 cut(s)	217, 536, 1159, 1515
TfiI	GAWTC	5 cut(s)	47, 86, 842, 1676, 1802
Tru1I	TTAA	4 cut(s)	1230, 1307, 1437, 1502
Tru9I	TTAA	4 cut(s)	1230, 1307, 1437, 1502
TscAI	CASTG	5 cut(s)	1333, 1354, 1360, 1549, 1655
TseFI	GTSAC	3 cut(s)	8, 885, 894
TseI	GCWGC	6 cut(s)	235, 238, 356, 1133, 1203, 1319
Tsp45I	GTSAC	3 cut(s)	8, 885, 894
TspGWI	ACGGA	1 cut(s)	1471
TspRI	CASTG	5 cut(s)	1333, 1354, 1360, 1549, 1655
Tth111I	GACNNNGTC	1 cut(s)	1761
Vha464I	CTTAAG	1 cut(s)	1436
XagI	CCTNNNNNAGG	1 cut(s)	147
XapI	RAATTY	4 cut(s)	92, 299, 1681, 1836
XceI	RCATGY	4 cut(s)	263, 318, 675, 1259
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1666
XmnI	GAANNNNTTC	2 cut(s)	1298, 1566
XspI	CTAG	6 cut(s)	72, 383, 549, 615, 1082, 1281
ZrmI	AGTACT	1 cut(s)	1161
Zsp2I	ATGCAT	3 cut(s)	815, 1257, 1745

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.