Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001211

Physical Location & Seq

Genomic Coordinates Reverse (-)

1175477 .. 1176427

Gene Structure 951 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G016400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 639 bp

ATGGCAAGTGTCAAAATAATTGACCTGGTCCTCCGCGGCAAAGCTACACATTCATATGATCCACCACTTTACATGCCTACTTATTCCAAATTGTGCTTGGAACCATCTCAAATTTCCTGCAATTCTATGAACTCATCAAGAATTTCCCTTCGTCCTTTCAAACTCTCTGATGCCAATGACTTCCTCAAATGGGCAAGTGATGATAAAGTAACACGCTATCTAAGATGGAACACCATAACCTCTAGGGAAGAAGCCTTGACATATATTGAGAAGCTTGCTACACATCCGTGGCGTCAGTCCATATGTTTGGATGACCAATCAATTGGATATGTTTCTGTCAAACCAGAACAGGGTGATGACATGTGTAGAGCACATGTTAGCTATGTTGTGTCCGCAGAGTACTGTGGGCAAGGGATTGCAACAGTGGCATTGAGGATGGCCATGTGTAGGGTGTTCAGAGAGCTCCCATGTTTGGTGAGGATTGAGGCTTTGGTGGAGGTTGAGAATAAGGGATCTCAAAGGGTTTTGGAGAAAGTTGGGTTTCTGAAAGAAGGGTTGTTGAGGAAGTATGGGTATTGCAAAGGTGAGATTAGAGATATGTTTATCTATAGCTTCTTATCAACTGATAAGATTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_3

Protein Analysis

213

Amino Acids

24.26

Weight (kDa)

8.56

Isoelectric Point (pI)

40.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001211)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22560
fragaria_vesca	FvH4_4g26610 FvH4_6g03890
malus_domestica	MD04G1217600.v1.1 MD13G1195500.v1.1 MD16G1196300.v1.1
prunus_persica	Prupe.1G016400_v2.0.a1 Prupe.1G016500_v2.0.a1 Prupe.6G337400_v2.0.a1
pyrus_communis	pycom04g19350 pycom13g16770 pycom13g16780
rosa_chinensis	RchiOBHm_Chr3g0452461 RchiOBHm_Chr4g0415671 RchiOBHm_Chr4g0415681 RchiOBHm_Chr4g0415701 RchiOBHm_Chr4g0415711 RchiOBHm_Chr6g0273471
rosa_laevigata	RLG00000008048 RLG00000008049 RLG00000013614 RLG00000025600
rosa_multiflora	Rmu_sc0004536.1_g000003 Rmu_sc0004536.1_g000004 Rmu_sc0011680.1_g000006 Rmu_sc0026940.1_g000001
rosa_roxburghii	Rroxscaffold_5G00355380 Rroxscaffold_6G00429470 Rroxscaffold_7G00195300
rosa_rugosa	Rorug02G0641100 Rorug04G0113600 Rorug04G0113700 Rorug04G0136300 Rorug04G0136400 Rorug06G0075600
rosa_samantha	Rh3AG042800 Rh3BG044500 Rh3CG043100 Rh3DG043900 Rh4AG197200 Rh4AG197300 Rh4BG195700 Rh4BG195800 Rh4CG208000 Rh4CG208100 Rh4CG208300 Rh4DG195000 Rh4DG195100 Rh6AG190300 Rh6BG193800 Rh6CG193300 Rh6DG184900
rosa_wichuraiana	Rw3G003310 Rw4G016770 Rw4G016780 Rw6G016650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	36
AciI	CCGC	3 cut(s)	34, 36, 393
AclWI	GGATC	2 cut(s)	53, 520
AcoI	YGGCCR	1 cut(s)	438
AcsI	RAATTY	2 cut(s)	111, 141
AcyI	GRCGYC	1 cut(s)	292
AfaI	GTAC	1 cut(s)	401
AfiI	CCNNNNNNNGG	4 cut(s)	190, 350, 447, 472
AflIII	ACRYGT	2 cut(s)	360, 373
AgsI	TTSAA	1 cut(s)	160
AjnI	CCWGG	1 cut(s)	24
AleI	CACNNNNGTG	1 cut(s)	286
AluBI	AGCT	5 cut(s)	44, 274, 381, 463, 612
AluI	AGCT	5 cut(s)	44, 274, 381, 463, 612
Alw21I	GWGCWC	2 cut(s)	373, 465
AlwI	GGATC	2 cut(s)	53, 520
AoxI	GGCC	1 cut(s)	438
ApoI	RAATTY	2 cut(s)	111, 141
AspS9I	GGNCC	1 cut(s)	28
AsuHPI	GGTGA	3 cut(s)	365, 487, 596
AvaII	GGWCC	1 cut(s)	28
BalI	TGGCCA	1 cut(s)	440
BanII	GRGCYC	1 cut(s)	465
Bbv12I	GWGCWC	2 cut(s)	373, 465
BccI	CCATC	3 cut(s)	112, 219, 430
BciT130I	CCWGG	1 cut(s)	26
BfaI	CTAG	1 cut(s)	243
BfmI	CTRYAG	1 cut(s)	607
BisI	GCNGC	1 cut(s)	37
BlsI	GCNGC	1 cut(s)	38
BmcAI	AGTACT	1 cut(s)	401
Bme1390I	CCNGG	1 cut(s)	26
Bme18I	GGWCC	1 cut(s)	28
BmgT120I	GGNCC	1 cut(s)	28
BmiI	GGNNCC	1 cut(s)	102
BmrFI	CCNGG	1 cut(s)	26
BmsI	GCATC	1 cut(s)	160
BsaHI	GRCGYC	1 cut(s)	292
BsaJI	CCNNGG	2 cut(s)	34, 287
Bsc4I	CCNNNNNNNGG	4 cut(s)	190, 350, 447, 472
BseBI	CCWGG	1 cut(s)	26
BseDI	CCNNGG	2 cut(s)	34, 287
BseGI	GGATG	3 cut(s)	283, 316, 441
BseLI	CCNNNNNNNGG	4 cut(s)	190, 350, 447, 472
Bsh1236I	CGCG	1 cut(s)	36
BshFI	GGCC	1 cut(s)	440
BsiHKAI	GWGCWC	2 cut(s)	373, 465
BslI	CCNNNNNNNGG	4 cut(s)	190, 350, 447, 472
BsnI	GGCC	1 cut(s)	440
Bsp1286I	GDGCHC	2 cut(s)	373, 465
Bsp143I	GATC	2 cut(s)	58, 512
BspACI	CCGC	3 cut(s)	34, 36, 393
BspANI	GGCC	1 cut(s)	440
BspFNI	CGCG	1 cut(s)	36
BspLI	GGNNCC	1 cut(s)	102
BspPI	GGATC	2 cut(s)	53, 520
BssECI	CCNNGG	2 cut(s)	34, 287
BssMI	GATC	2 cut(s)	58, 512
BssNI	GRCGYC	1 cut(s)	292
Bst2UI	CCWGG	1 cut(s)	26
Bst4CI	ACNGT	2 cut(s)	404, 424
BstACI	GRCGYC	1 cut(s)	292
BstC8I	GCNNGC	1 cut(s)	276
BstDEI	CTNAG	1 cut(s)	221
BstDSI	CCRYGG	2 cut(s)	34, 287
BstF5I	GGATG	3 cut(s)	283, 316, 441
BstFNI	CGCG	1 cut(s)	36
BstKTI	GATC	2 cut(s)	61, 515
BstMBI	GATC	2 cut(s)	58, 512
BstMWI	GCNNNNNNNGC	1 cut(s)	425
BstNI	CCWGG	1 cut(s)	26
BstNSI	RCATGY	3 cut(s)	76, 364, 377
BstSCI	CCNGG	1 cut(s)	24
BstSFI	CTRYAG	1 cut(s)	607
BstUI	CGCG	1 cut(s)	36
BstX2I	RGATCY	1 cut(s)	512
BstXI	CCANNNNNNTGG	2 cut(s)	307, 323
BstYI	RGATCY	1 cut(s)	512
BsuRI	GGCC	1 cut(s)	440
BtgI	CCRYGG	2 cut(s)	34, 287
BtsCI	GGATG	3 cut(s)	283, 316, 441
BtsIMutI	CAGTG	1 cut(s)	429
Cac8I	GCNNGC	1 cut(s)	276
Cfr13I	GGNCC	1 cut(s)	28
Cfr42I	CCGCGG	1 cut(s)	37
CseI	GACGC	1 cut(s)	281
CsiI	ACCWGGT	1 cut(s)	24
Csp6I	GTAC	1 cut(s)	400
CviAII	CATG	5 cut(s)	73, 361, 374, 442, 468
CviJI	RGCY	8 cut(s)	44, 254, 274, 381, 440, 463, 488, 612
CviKI_1	RGCY	8 cut(s)	44, 254, 274, 381, 440, 463, 488, 612
CviQI	GTAC	1 cut(s)	400
DdeI	CTNAG	1 cut(s)	221
DpnI	GATC	2 cut(s)	60, 514
DpnII	GATC	2 cut(s)	58, 512
EaeI	YGGCCR	1 cut(s)	438
Ecl136II	GAGCTC	1 cut(s)	463
Eco24I	GRGCYC	1 cut(s)	465
Eco47I	GGWCC	1 cut(s)	28
Eco53kI	GAGCTC	1 cut(s)	463
EcoICRI	GAGCTC	1 cut(s)	463
EcoRII	CCWGG	1 cut(s)	24
EcoT38I	GRGCYC	1 cut(s)	465
FaeI	CATG	5 cut(s)	76, 364, 377, 445, 471
FatI	CATG	5 cut(s)	72, 360, 373, 441, 467
FauNDI	CATATG	2 cut(s)	55, 302
Fnu4HI	GCNGC	1 cut(s)	37
FokI	GGATG	3 cut(s)	270, 323, 448
FriOI	GRGCYC	1 cut(s)	465
Fsp4HI	GCNGC	1 cut(s)	37
FspBI	CTAG	1 cut(s)	243
GluI	GCNGC	1 cut(s)	37
HaeIII	GGCC	1 cut(s)	440
HgaI	GACGC	1 cut(s)	281
Hin1I	GRCGYC	1 cut(s)	292
Hin1II	CATG	5 cut(s)	76, 364, 377, 445, 471
HindIII	AAGCTT	1 cut(s)	272
HphI	GGTGA	3 cut(s)	365, 487, 596
Hpy188I	TCNGA	3 cut(s)	169, 458, 546
Hpy188III	TCNNGA	1 cut(s)	138
HpyAV	CCTTC	2 cut(s)	158, 545
HpyCH4III	ACNGT	2 cut(s)	404, 424
HpyCH4V	TGCA	3 cut(s)	120, 419, 579
HpyF10VI	GCNNNNNNNGC	1 cut(s)	425
HpyF3I	CTNAG	1 cut(s)	221
Hsp92I	GRCGYC	1 cut(s)	292
Hsp92II	CATG	5 cut(s)	76, 364, 377, 445, 471
KspI	CCGCGG	1 cut(s)	37
Kzo9I	GATC	2 cut(s)	58, 512
LmnI	GCTCC	1 cut(s)	468
LpnPI	CCDG	5 cut(s)	11, 38, 130, 335, 357
LweI	GCATC	1 cut(s)	160
MabI	ACCWGGT	1 cut(s)	24
MaeI	CTAG	1 cut(s)	243
MaeIII	GTNAC	1 cut(s)	208
MalI	GATC	2 cut(s)	60, 514
MboI	GATC	2 cut(s)	58, 512
MboII	GAAGA	1 cut(s)	260
MfeI	CAATTG	1 cut(s)	321
MflI	RGATCY	1 cut(s)	512
MhlI	GDGCHC	2 cut(s)	373, 465
MlsI	TGGCCA	1 cut(s)	440
MluCI	AATT	6 cut(s)	18, 89, 111, 121, 141, 321
MluNI	TGGCCA	1 cut(s)	440
MnlI	CCTC	8 cut(s)	41, 194, 250, 426, 471, 478, 490, 555
Mox20I	TGGCCA	1 cut(s)	440
MscI	TGGCCA	1 cut(s)	440
MslI	CAYNNNNRTG	2 cut(s)	54, 286
Msp20I	TGGCCA	1 cut(s)	440
MspA1I	CMGCKG	1 cut(s)	36
MspR9I	CCNGG	1 cut(s)	26
MunI	CAATTG	1 cut(s)	321
MvaI	CCWGG	1 cut(s)	26
MvnI	CGCG	1 cut(s)	36
MwoI	GCNNNNNNNGC	1 cut(s)	425
NdeI	CATATG	2 cut(s)	55, 302
NdeII	GATC	2 cut(s)	58, 512
NlaIII	CATG	5 cut(s)	76, 364, 377, 445, 471
NlaIV	GGNNCC	1 cut(s)	102
NspI	RCATGY	3 cut(s)	76, 364, 377
OliI	CACNNNNGTG	1 cut(s)	286
PciI	ACATGT	2 cut(s)	360, 373
PflFI	GACNNNGTC	1 cut(s)	26
PkrI	GCNGC	1 cut(s)	38
PscI	ACATGT	2 cut(s)	360, 373
Psp124BI	GAGCTC	1 cut(s)	465
Psp6I	CCWGG	1 cut(s)	24
PspGI	CCWGG	1 cut(s)	24
PspN4I	GGNNCC	1 cut(s)	102
PspPI	GGNCC	1 cut(s)	28
PsuI	RGATCY	1 cut(s)	512
PsyI	GACNNNGTC	1 cut(s)	26
RsaI	GTAC	1 cut(s)	401
RsaNI	GTAC	1 cut(s)	400
RseI	CAYNNNNRTG	2 cut(s)	54, 286
SacI	GAGCTC	1 cut(s)	465
SacII	CCGCGG	1 cut(s)	37
SatI	GCNGC	1 cut(s)	37
Sau3AI	GATC	2 cut(s)	58, 512
Sau96I	GGNCC	1 cut(s)	28
ScaI	AGTACT	1 cut(s)	401
ScrFI	CCNGG	1 cut(s)	26
SduI	GDGCHC	2 cut(s)	373, 465
SetI	ASST	9 cut(s)	27, 46, 242, 276, 383, 465, 501, 586, 614
SexAI	ACCWGGT	1 cut(s)	24
SfaNI	GCATC	1 cut(s)	160
SfcI	CTRYAG	1 cut(s)	607
Sfr303I	CCGCGG	1 cut(s)	37
SgrBI	CCGCGG	1 cut(s)	37
SinI	GGWCC	1 cut(s)	28
SmiMI	CAYNNNNRTG	2 cut(s)	54, 286
Sse9I	AATT	6 cut(s)	18, 89, 111, 121, 141, 321
SsiI	CCGC	3 cut(s)	34, 36, 393
SspMI	CTAG	1 cut(s)	243
SstI	GAGCTC	1 cut(s)	465
StyD4I	CCNGG	1 cut(s)	24
TaaI	ACNGT	2 cut(s)	404, 424
TasI	AATT	6 cut(s)	18, 89, 111, 121, 141, 321
TatI	WGTACW	1 cut(s)	399
TauI	GCSGC	1 cut(s)	39
TscAI	CASTG	1 cut(s)	429
TspDTI	ATGAA	2 cut(s)	42, 143
TspGWI	ACGGA	1 cut(s)	276
TspRI	CASTG	1 cut(s)	429
Tth111I	GACNNNGTC	1 cut(s)	26
VpaK11BI	GGWCC	1 cut(s)	28
XapI	RAATTY	2 cut(s)	111, 141
XceI	RCATGY	3 cut(s)	76, 364, 377
XcmI	CCANNNNNNNNNTGG	1 cut(s)	94
XspI	CTAG	1 cut(s)	243
ZrmI	AGTACT	1 cut(s)	401

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.