Rh4DG195100

N-acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0001211
Physical Location & Seq
Forward (+)
38105636 .. 38123692
18057 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG195100.1

Sequence Viewer

Length: 615 bp
ATGGATTCCTCCAGAATTTCACTTCGTCCTTTCAAACTCTCCGATGCAGATGACTTCCTGAAATGGGCAAGTGATGACAGAGTAACACGCTATCTGAGATGGAACACCATAACCTCTGGAGAAGAAGCCTTGACATATATTGAGAAGGTTTGTATTTCTCACCCATGGCGTCAGTCCATATGTTTGGATGACCATTGCATAGGATATGTTTCTGTCAAACCCGAACGGGGTGATGATTCGTGCAGGGCACATGTTAGCTATGCTTTGTCTGCAGACTTCTGGGGGCAAGGGATTGTCACATTGGCATTGAAGATGGCCATCTCTAGGGTCTTCAAAGAGTTCCTATTTCTGGTGAGGATTGAGGCTTTGGTTGAGGTTGAGAATAAGGGATCTCAAAGGGTTTTAGAGAAGGTTGGGTTTGTGAAAGAAGGGTTGTTAAGGAAGTATGGGTATTGCAAAGGTTTAGTTAGGAGGTCTGCTTTGGGTTTGCAAGCTGCATTTGTGATGCTGCATCTGATATATGCTGGTTTCATTCCTATACCTACAACAACTTCTCAATTATTGCTCCGAAGGGGTCATCCAACACCCATGTCACAAGGCCACAAACATGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_3

Protein Analysis

204

Amino Acids

23.13

Weight (kDa)

9.24

Isoelectric Point (pI)

42.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_3 PF13302 5 - 141 1e-25 Acetyltransferase (GNAT) domain
Acetyltransf_4 PF13420 9 - 154 4e-06 Acetyltransferase (GNAT) domain
Acetyltransf_1 PF00583 55 - 140 3.2e-09 Acetyltransferase (GNAT) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 397
AcoI YGGCCR 1 cut(s) 315
AcsI RAATTY 1 cut(s) 15
AcyI GRCGYC 1 cut(s) 169
AfiI CCNNNNNNNGG 4 cut(s) 64, 227, 324, 349
AflIII ACRYGT 1 cut(s) 250
AgsI TTSAA 3 cut(s) 34, 310, 334
AluBI AGCT 2 cut(s) 258, 494
AluI AGCT 2 cut(s) 258, 494
AlwI GGATC 1 cut(s) 397
AoxI GGCC 2 cut(s) 315, 598
ApeKI GCWGC 2 cut(s) 494, 508
ApoI RAATTY 1 cut(s) 15
AsuHPI GGTGA 3 cut(s) 152, 242, 364
BaeGI GKGCMC 1 cut(s) 250
BalI TGGCCA 1 cut(s) 317
BbsI GAAGAC 1 cut(s) 322
BbvI GCAGC 2 cut(s) 481, 495
BccI CCATC 3 cut(s) 93, 307, 326
BfaI CTAG 1 cut(s) 324
BfmI CTRYAG 1 cut(s) 270
BisI GCNGC 2 cut(s) 495, 509
BlsI GCNGC 2 cut(s) 496, 510
BmsI GCATC 3 cut(s) 34, 495, 520
BpiI GAAGAC 1 cut(s) 322
BpmI CTGGAG 1 cut(s) 138
BsaBI GATNNNNATC 1 cut(s) 317
BsaHI GRCGYC 1 cut(s) 169
BsaJI CCNNGG 1 cut(s) 164
Bsc4I CCNNNNNNNGG 4 cut(s) 64, 227, 324, 349
Bse3DI GCAATG 1 cut(s) 193
Bse8I GATNNNNATC 1 cut(s) 317
BseDI CCNNGG 1 cut(s) 164
BseGI GGATG 2 cut(s) 193, 577
BseJI GATNNNNATC 1 cut(s) 317
BseLI CCNNNNNNNGG 4 cut(s) 64, 227, 324, 349
BseMI GCAATG 1 cut(s) 193
BseMII CTCAG 1 cut(s) 86
BseSI GKGCMC 1 cut(s) 250
BseXI GCAGC 2 cut(s) 481, 495
BsgI GTGCAG 1 cut(s) 262
BshFI GGCC 2 cut(s) 317, 600
BslI CCNNNNNNNGG 4 cut(s) 64, 227, 324, 349
BsnI GGCC 2 cut(s) 317, 600
Bsp1286I GDGCHC 1 cut(s) 250
Bsp143I GATC 1 cut(s) 389
Bsp19I CCATGG 1 cut(s) 164
BspANI GGCC 2 cut(s) 317, 600
BspCNI CTCAG 1 cut(s) 87
BspMAI CTGCAG 1 cut(s) 274
BspPI GGATC 1 cut(s) 397
BsrDI GCAATG 1 cut(s) 193
BssECI CCNNGG 1 cut(s) 164
BssMI GATC 1 cut(s) 389
BssNI GRCGYC 1 cut(s) 169
BssT1I CCWWGG 1 cut(s) 164
BstACI GRCGYC 1 cut(s) 169
BstC8I GCNNGC 1 cut(s) 492
BstDEI CTNAG 1 cut(s) 95
BstDSI CCRYGG 1 cut(s) 164
BstF5I GGATG 2 cut(s) 193, 577
BstKTI GATC 1 cut(s) 392
BstMBI GATC 1 cut(s) 389
BstMWI GCNNNNNNNGC 1 cut(s) 269
BstNSI RCATGY 2 cut(s) 254, 611
BstSFI CTRYAG 1 cut(s) 270
BstSLI GKGCMC 1 cut(s) 250
BstV1I GCAGC 2 cut(s) 481, 495
BstV2I GAAGAC 1 cut(s) 322
BstX2I RGATCY 1 cut(s) 389
BstXI CCANNNNNNTGG 1 cut(s) 184
BstYI RGATCY 1 cut(s) 389
BsuRI GGCC 2 cut(s) 317, 600
BtgI CCRYGG 1 cut(s) 164
BtsCI GGATG 2 cut(s) 193, 577
Cac8I GCNNGC 1 cut(s) 492
CseI GACGC 1 cut(s) 158
CviAII CATG 4 cut(s) 165, 251, 589, 608
CviJI RGCY 6 cut(s) 128, 258, 317, 365, 494, 600
CviKI_1 RGCY 6 cut(s) 128, 258, 317, 365, 494, 600
DdeI CTNAG 1 cut(s) 95
DpnI GATC 1 cut(s) 391
DpnII GATC 1 cut(s) 389
EaeI YGGCCR 1 cut(s) 315
Eco130I CCWWGG 1 cut(s) 164
EcoT14I CCWWGG 1 cut(s) 164
ErhI CCWWGG 1 cut(s) 164
FaeI CATG 4 cut(s) 168, 254, 592, 611
FatI CATG 4 cut(s) 164, 250, 588, 607
FauNDI CATATG 1 cut(s) 179
Fnu4HI GCNGC 2 cut(s) 495, 509
FokI GGATG 2 cut(s) 200, 564
Fsp4HI GCNGC 2 cut(s) 495, 509
FspBI CTAG 1 cut(s) 324
GluI GCNGC 2 cut(s) 495, 509
GsuI CTGGAG 1 cut(s) 138
HaeIII GGCC 2 cut(s) 317, 600
HgaI GACGC 1 cut(s) 158
Hin1I GRCGYC 1 cut(s) 169
Hin1II CATG 4 cut(s) 168, 254, 592, 611
HinfI GANTC 2 cut(s) 5, 236
HphI GGTGA 3 cut(s) 152, 242, 364
Hpy188I TCNGA 4 cut(s) 43, 96, 516, 569
Hpy188III TCNNGA 3 cut(s) 12, 58, 117
HpyAV CCTTC 4 cut(s) 139, 403, 422, 564
HpyCH4V TGCA 8 cut(s) 47, 198, 243, 272, 456, 490, 497, 511
HpyF10VI GCNNNNNNNGC 1 cut(s) 269
HpyF3I CTNAG 1 cut(s) 95
Hsp92I GRCGYC 1 cut(s) 169
Hsp92II CATG 4 cut(s) 168, 254, 592, 611
Kzo9I GATC 1 cut(s) 389
LmnI GCTCC 1 cut(s) 570
LpnPI CCDG 7 cut(s) 25, 71, 102, 229, 265, 335, 510
Lsp1109I GCAGC 2 cut(s) 481, 495
LweI GCATC 3 cut(s) 34, 495, 520
MaeI CTAG 1 cut(s) 324
MaeIII GTNAC 3 cut(s) 82, 295, 591
MalI GATC 1 cut(s) 391
MboI GATC 1 cut(s) 389
MboII GAAGA 3 cut(s) 134, 322, 322
MflI RGATCY 1 cut(s) 389
MhlI GDGCHC 1 cut(s) 250
MlsI TGGCCA 1 cut(s) 317
MluCI AATT 2 cut(s) 15, 557
MluNI TGGCCA 1 cut(s) 317
MmeI TCCRAC 1 cut(s) 605
MnlI CCTC 6 cut(s) 19, 124, 348, 355, 367, 465
Mox20I TGGCCA 1 cut(s) 317
MscI TGGCCA 1 cut(s) 317
MseI TTAA 1 cut(s) 437
MslI CAYNNNNRTG 1 cut(s) 606
Msp20I TGGCCA 1 cut(s) 317
MwoI GCNNNNNNNGC 1 cut(s) 269
NcoI CCATGG 1 cut(s) 164
NdeI CATATG 1 cut(s) 179
NdeII GATC 1 cut(s) 389
NlaIII CATG 4 cut(s) 168, 254, 592, 611
NmuCI GTSAC 2 cut(s) 295, 591
NspI RCATGY 2 cut(s) 254, 611
PciI ACATGT 1 cut(s) 250
PfeI GAWTC 2 cut(s) 5, 236
PkrI GCNGC 2 cut(s) 496, 510
PscI ACATGT 1 cut(s) 250
PstI CTGCAG 1 cut(s) 274
PsuI RGATCY 1 cut(s) 389
RseI CAYNNNNRTG 1 cut(s) 606
SaqAI TTAA 1 cut(s) 437
SatI GCNGC 2 cut(s) 495, 509
Sau3AI GATC 1 cut(s) 389
SduI GDGCHC 1 cut(s) 250
SetI ASST 9 cut(s) 116, 150, 260, 378, 414, 463, 476, 496, 544
SfaNI GCATC 3 cut(s) 34, 495, 520
SfcI CTRYAG 1 cut(s) 270
SmiMI CAYNNNNRTG 1 cut(s) 606
Sse9I AATT 2 cut(s) 15, 557
SspMI CTAG 1 cut(s) 324
StyI CCWWGG 1 cut(s) 164
TasI AATT 2 cut(s) 15, 557
TfiI GAWTC 2 cut(s) 5, 236
Tru1I TTAA 1 cut(s) 437
Tru9I TTAA 1 cut(s) 437
TseFI GTSAC 2 cut(s) 295, 591
TseI GCWGC 2 cut(s) 494, 508
Tsp45I GTSAC 2 cut(s) 295, 591
TspDTI ATGAA 1 cut(s) 520
XapI RAATTY 1 cut(s) 15
XceI RCATGY 2 cut(s) 254, 611
XspI CTAG 1 cut(s) 324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.