Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0001211

Physical Location & Seq

Genomic Coordinates Forward (+)

29271164 .. 29271667

Gene Structure 504 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G337400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 504 bp

ATGATCACTCTCCGTCCATTCAGGCTATCTGACGTTGATGATCTCATGTCATACGCAGGCGATGATCAAGTGACTCGGTCCCTCCGATGGAAGACTTTGACAACCAGAGATGAGGCTTTGACTTTCATCAAGGATGTTTGTATCCCCCACCCTTGGCGCCAGGCGATATGCATCGATGACCGTTCGATCGGGTTTGTAACCATTTTTCCAGGATCAGGTGATGACAGGTACAAGGCAGACTTGGGATATGCAATAGCAGCAAAGTACTGGGGGCAAGGGATTACCACCAAAGCAGTTAAGATTGCGGTGTCTCAAATTTTCAATGACTTCCCTATTTTGGTGAGGTTGCAGGCTTTTGCCGATGTAGAGAACAAGGCCTCTCAGAGGGTTTTCGAGAAATCTGGGTTCCAAAGGGAGGGTGTGTTAAGGAAATATGGATATCTTAAGGGAAATATTAAGGATTTGGTTGTTTATAGTTTTCTATCAACAGAAGTTGCAGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_3

Protein Analysis

168

Amino Acids

18.94

Weight (kDa)

8.85

Isoelectric Point (pI)

32.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001211)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22560
fragaria_vesca	FvH4_4g26610 FvH4_6g03890
malus_domestica	MD04G1217600.v1.1 MD13G1195500.v1.1 MD16G1196300.v1.1
prunus_persica	Prupe.1G016400_v2.0.a1 Prupe.1G016500_v2.0.a1 Prupe.6G337400_v2.0.a1
pyrus_communis	pycom04g19350 pycom13g16770 pycom13g16780
rosa_chinensis	RchiOBHm_Chr3g0452461 RchiOBHm_Chr4g0415671 RchiOBHm_Chr4g0415681 RchiOBHm_Chr4g0415701 RchiOBHm_Chr4g0415711 RchiOBHm_Chr6g0273471
rosa_laevigata	RLG00000008048 RLG00000008049 RLG00000013614 RLG00000025600
rosa_multiflora	Rmu_sc0004536.1_g000003 Rmu_sc0004536.1_g000004 Rmu_sc0011680.1_g000006 Rmu_sc0026940.1_g000001
rosa_roxburghii	Rroxscaffold_5G00355380 Rroxscaffold_6G00429470 Rroxscaffold_7G00195300
rosa_rugosa	Rorug02G0641100 Rorug04G0113600 Rorug04G0113700 Rorug04G0136300 Rorug04G0136400 Rorug06G0075600
rosa_samantha	Rh3AG042800 Rh3BG044500 Rh3CG043100 Rh3DG043900 Rh4AG197200 Rh4AG197300 Rh4BG195700 Rh4BG195800 Rh4CG208000 Rh4CG208100 Rh4CG208300 Rh4DG195000 Rh4DG195100 Rh6AG190300 Rh6BG193800 Rh6CG193300 Rh6DG184900
rosa_wichuraiana	Rw3G003310 Rw4G016770 Rw4G016780 Rw6G016650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	156
AciI	CCGC	1 cut(s)	305
AclWI	GGATC	1 cut(s)	220
AcsI	RAATTY	1 cut(s)	315
AcyI	GRCGYC	1 cut(s)	157
AfaI	GTAC	2 cut(s)	230, 266
AfiI	CCNNNNNNNGG	6 cut(s)	87, 153, 215, 337, 384, 415
AflII	CTTAAG	1 cut(s)	443
AgsI	TTSAA	1 cut(s)	322
AjnI	CCWGG	2 cut(s)	159, 208
Alw26I	GTCTC	1 cut(s)	315
AlwI	GGATC	1 cut(s)	220
AoxI	GGCC	1 cut(s)	375
ApeKI	GCWGC	1 cut(s)	257
ApoI	RAATTY	1 cut(s)	315
AspLEI	GCGC	1 cut(s)	159
AspS9I	GGNCC	1 cut(s)	78
AsuHPI	GGTGA	2 cut(s)	230, 352
AvaII	GGWCC	1 cut(s)	78
BanI	GGYRCC	1 cut(s)	156
BbsI	GAAGAC	1 cut(s)	98
BbvI	GCAGC	1 cut(s)	269
BccI	CCATC	1 cut(s)	81
BciT130I	CCWGG	2 cut(s)	161, 210
BciVI	GTATCC	1 cut(s)	152
BclI	TGATCA	2 cut(s)	3, 64
BcoDI	GTCTC	1 cut(s)	315
BfoI	RGCGCY	1 cut(s)	160
BfrI	CTTAAG	1 cut(s)	443
BfuI	GTATCC	1 cut(s)	152
BisI	GCNGC	1 cut(s)	258
BlsI	GCNGC	1 cut(s)	259
BmcAI	AGTACT	1 cut(s)	266
Bme1390I	CCNGG	2 cut(s)	161, 210
Bme18I	GGWCC	1 cut(s)	78
BmgT120I	GGNCC	1 cut(s)	78
BmiI	GGNNCC	3 cut(s)	80, 158, 407
BmrFI	CCNGG	2 cut(s)	161, 210
BmrI	ACTGGG	1 cut(s)	277
BmsI	GCATC	1 cut(s)	180
BmuI	ACTGGG	1 cut(s)	277
BpiI	GAAGAC	1 cut(s)	98
Bsa29I	ATCGAT	1 cut(s)	174
BsaBI	GATNNNNATC	1 cut(s)	170
BsaHI	GRCGYC	1 cut(s)	157
BsaJI	CCNNGG	1 cut(s)	152
BsaXI	ACNNNNNCTCC	2 cut(s)	407, 437
Bsc4I	CCNNNNNNNGG	6 cut(s)	87, 153, 215, 337, 384, 415
Bse1I	ACTGG	1 cut(s)	272
Bse8I	GATNNNNATC	1 cut(s)	170
BseBI	CCWGG	2 cut(s)	161, 210
BseCI	ATCGAT	1 cut(s)	174
BseDI	CCNNGG	1 cut(s)	152
BseGI	GGATG	1 cut(s)	139
BseJI	GATNNNNATC	1 cut(s)	170
BseLI	CCNNNNNNNGG	6 cut(s)	87, 153, 215, 337, 384, 415
BseMII	CTCAG	1 cut(s)	395
BseNI	ACTGG	1 cut(s)	272
BseXI	GCAGC	1 cut(s)	269
Bsh1285I	CGRYCG	1 cut(s)	189
BshFI	GGCC	1 cut(s)	377
BshNI	GGYRCC	1 cut(s)	156
BshVI	ATCGAT	1 cut(s)	174
BsiEI	CGRYCG	1 cut(s)	189
BslFI	GGGAC	1 cut(s)	64
BslI	CCNNNNNNNGG	6 cut(s)	87, 153, 215, 337, 384, 415
BsmAI	GTCTC	1 cut(s)	315
BsmFI	GGGAC	1 cut(s)	64
BsnI	GGCC	1 cut(s)	377
Bsp143I	GATC	5 cut(s)	3, 40, 64, 186, 212
BspACI	CCGC	1 cut(s)	305
BspANI	GGCC	1 cut(s)	377
BspCNI	CTCAG	1 cut(s)	394
BspDI	ATCGAT	1 cut(s)	174
BspLI	GGNNCC	3 cut(s)	80, 158, 407
BspPI	GGATC	1 cut(s)	220
BspT107I	GGYRCC	1 cut(s)	156
BspTI	CTTAAG	1 cut(s)	443
BsrI	ACTGG	1 cut(s)	272
BssECI	CCNNGG	1 cut(s)	152
BssMI	GATC	5 cut(s)	3, 40, 64, 186, 212
BssNI	GRCGYC	1 cut(s)	157
BssT1I	CCWWGG	1 cut(s)	152
Bst2UI	CCWGG	2 cut(s)	161, 210
Bst4CI	ACNGT	1 cut(s)	182
BstACI	GRCGYC	1 cut(s)	157
BstAFI	CTTAAG	1 cut(s)	443
BstC8I	GCNNGC	2 cut(s)	58, 351
BstDEI	CTNAG	1 cut(s)	381
BstENI	CCTNNNNNAGG	1 cut(s)	382
BstF5I	GGATG	1 cut(s)	139
BstH2I	RGCGCY	1 cut(s)	160
BstHHI	GCGC	1 cut(s)	159
BstKTI	GATC	5 cut(s)	6, 43, 67, 189, 215
BstMAI	GTCTC	1 cut(s)	315
BstMBI	GATC	5 cut(s)	3, 40, 64, 186, 212
BstMCI	CGRYCG	1 cut(s)	189
BstMWI	GCNNNNNNNGC	1 cut(s)	257
BstNI	CCWGG	2 cut(s)	161, 210
BstSCI	CCNGG	2 cut(s)	159, 208
BstV1I	GCAGC	1 cut(s)	269
BstV2I	GAAGAC	1 cut(s)	98
Bsu15I	ATCGAT	1 cut(s)	174
BsuI	GTATCC	1 cut(s)	152
BsuRI	GGCC	1 cut(s)	377
BsuTUI	ATCGAT	1 cut(s)	174
BtgZI	GCGATG	1 cut(s)	75
BtsCI	GGATG	1 cut(s)	139
BtsI	GCAGTG	1 cut(s)	504
BtsIMutI	CAGTG	1 cut(s)	504
Cac8I	GCNNGC	2 cut(s)	58, 351
CfoI	GCGC	1 cut(s)	159
Cfr13I	GGNCC	1 cut(s)	78
ClaI	ATCGAT	1 cut(s)	174
Csp6I	GTAC	2 cut(s)	229, 265
CviAII	CATG	1 cut(s)	46
CviJI	RGCY	4 cut(s)	25, 116, 353, 377
CviKI_1	RGCY	4 cut(s)	25, 116, 353, 377
CviQI	GTAC	2 cut(s)	229, 265
DdeI	CTNAG	1 cut(s)	381
DinI	GGCGCC	1 cut(s)	158
DpnI	GATC	5 cut(s)	5, 42, 66, 188, 214
DpnII	GATC	5 cut(s)	3, 40, 64, 186, 212
Eco130I	CCWWGG	1 cut(s)	152
Eco147I	AGGCCT	1 cut(s)	377
Eco32I	GATATC	1 cut(s)	440
Eco47I	GGWCC	1 cut(s)	78
EcoNI	CCTNNNNNAGG	1 cut(s)	382
EcoRII	CCWGG	2 cut(s)	159, 208
EcoRV	GATATC	1 cut(s)	440
EcoT14I	CCWWGG	1 cut(s)	152
EcoT22I	ATGCAT	1 cut(s)	173
EgeI	GGCGCC	1 cut(s)	158
EheI	GGCGCC	1 cut(s)	158
ErhI	CCWWGG	1 cut(s)	152
FaeI	CATG	1 cut(s)	49
FaiI	YATR	6 cut(s)	47, 52, 169, 249, 435, 474
FalI	AAGNNNNNCTT	2 cut(s)	224, 256
FaqI	GGGAC	1 cut(s)	64
FatI	CATG	1 cut(s)	45
FbaI	TGATCA	2 cut(s)	3, 64
Fnu4HI	GCNGC	1 cut(s)	258
FokI	GGATG	1 cut(s)	146
Fsp4HI	GCNGC	1 cut(s)	258
GlaI	GCGC	1 cut(s)	158
GluI	GCNGC	1 cut(s)	258
HaeII	RGCGCY	1 cut(s)	160
HaeIII	GGCC	1 cut(s)	377
HhaI	GCGC	1 cut(s)	159
Hin1I	GRCGYC	1 cut(s)	157
Hin1II	CATG	1 cut(s)	49
Hin6I	GCGC	1 cut(s)	157
HinP1I	GCGC	1 cut(s)	157
HinfI	GANTC	1 cut(s)	73
HphI	GGTGA	2 cut(s)	230, 352
Hpy188I	TCNGA	3 cut(s)	31, 86, 384
Hpy188III	TCNNGA	1 cut(s)	394
HpyCH4III	ACNGT	1 cut(s)	182
HpyCH4IV	ACGT	1 cut(s)	33
HpyCH4V	TGCA	4 cut(s)	171, 251, 349, 497
HpyF10VI	GCNNNNNNNGC	1 cut(s)	257
HpyF3I	CTNAG	1 cut(s)	381
HpySE526I	ACGT	1 cut(s)	33
Hsp92I	GRCGYC	1 cut(s)	157
Hsp92II	CATG	1 cut(s)	49
HspAI	GCGC	1 cut(s)	157
KasI	GGCGCC	1 cut(s)	156
Ksp22I	TGATCA	2 cut(s)	3, 64
Kzo9I	GATC	5 cut(s)	3, 40, 64, 186, 212
Lsp1109I	GCAGC	1 cut(s)	269
LweI	GCATC	1 cut(s)	180
MaeII	ACGT	1 cut(s)	33
MaeIII	GTNAC	2 cut(s)	70, 196
MalI	GATC	5 cut(s)	5, 42, 66, 188, 214
MboI	GATC	5 cut(s)	3, 40, 64, 186, 212
MboII	GAAGA	1 cut(s)	103
MluCI	AATT	1 cut(s)	315
Mly113I	GGCGCC	1 cut(s)	157
MlyI	GAGTC	1 cut(s)	67
MnlI	CCTC	6 cut(s)	92, 106, 336, 378, 388, 409
Mph1103I	ATGCAT	1 cut(s)	173
MseI	TTAA	4 cut(s)	297, 425, 444, 456
MspCI	CTTAAG	1 cut(s)	443
MspR9I	CCNGG	2 cut(s)	161, 210
MvaI	CCWGG	2 cut(s)	161, 210
MwoI	GCNNNNNNNGC	1 cut(s)	257
NarI	GGCGCC	1 cut(s)	157
NdeII	GATC	5 cut(s)	3, 40, 64, 186, 212
NlaIII	CATG	1 cut(s)	49
NlaIV	GGNNCC	3 cut(s)	80, 158, 407
NmuCI	GTSAC	1 cut(s)	70
NsiI	ATGCAT	1 cut(s)	173
PceI	AGGCCT	1 cut(s)	377
PcsI	WCGNNNNNNNCGW	1 cut(s)	82
PflFI	GACNNNGTC	1 cut(s)	76
PfoI	TCCNGGA	1 cut(s)	208
PkrI	GCNGC	1 cut(s)	259
Ple19I	CGATCG	1 cut(s)	189
PleI	GAGTC	1 cut(s)	67
PluTI	GGCGCC	1 cut(s)	160
PpsI	GAGTC	1 cut(s)	67
Psp6I	CCWGG	2 cut(s)	159, 208
PspGI	CCWGG	2 cut(s)	159, 208
PspN4I	GGNNCC	3 cut(s)	80, 158, 407
PspPI	GGNCC	1 cut(s)	78
PsyI	GACNNNGTC	1 cut(s)	76
PvuI	CGATCG	1 cut(s)	189
RsaI	GTAC	2 cut(s)	230, 266
RsaNI	GTAC	2 cut(s)	229, 265
SaqAI	TTAA	4 cut(s)	297, 425, 444, 456
SatI	GCNGC	1 cut(s)	258
Sau3AI	GATC	5 cut(s)	3, 40, 64, 186, 212
Sau96I	GGNCC	1 cut(s)	78
ScaI	AGTACT	1 cut(s)	266
SchI	GAGTC	1 cut(s)	67
ScrFI	CCNGG	2 cut(s)	161, 210
SetI	ASST	4 cut(s)	36, 220, 230, 347
SfaNI	GCATC	1 cut(s)	180
SfoI	GGCGCC	1 cut(s)	158
SinI	GGWCC	1 cut(s)	78
SmlI	CTYRAG	1 cut(s)	443
SmoI	CTYRAG	1 cut(s)	443
Sse9I	AATT	1 cut(s)	315
SseBI	AGGCCT	1 cut(s)	377
SsiI	CCGC	1 cut(s)	305
SspDI	GGCGCC	1 cut(s)	156
SspI	AATATT	1 cut(s)	454
StuI	AGGCCT	1 cut(s)	377
StyD4I	CCNGG	2 cut(s)	159, 208
StyI	CCWWGG	1 cut(s)	152
TaaI	ACNGT	1 cut(s)	182
TaiI	ACGT	1 cut(s)	36
TaqI	TCGA	3 cut(s)	174, 185, 393
TaqII	GACCGA	1 cut(s)	66
TasI	AATT	1 cut(s)	315
TatI	WGTACW	1 cut(s)	264
Tru1I	TTAA	4 cut(s)	297, 425, 444, 456
Tru9I	TTAA	4 cut(s)	297, 425, 444, 456
TscAI	CASTG	1 cut(s)	504
TseFI	GTSAC	1 cut(s)	70
TseI	GCWGC	1 cut(s)	257
Tsp45I	GTSAC	1 cut(s)	70
TspDTI	ATGAA	1 cut(s)	115
TspRI	CASTG	1 cut(s)	504
Tth111I	GACNNNGTC	1 cut(s)	76
Vha464I	CTTAAG	1 cut(s)	443
VpaK11BI	GGWCC	1 cut(s)	78
XagI	CCTNNNNNAGG	1 cut(s)	382
XapI	RAATTY	1 cut(s)	315
ZrmI	AGTACT	1 cut(s)	266
Zsp2I	ATGCAT	1 cut(s)	173

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.