Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001211

Physical Location & Seq

Genomic Coordinates Reverse (-)

1176916 .. 1177437

Gene Structure 522 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G016500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 522 bp

ATGGCAAACAATTCTCTGGAAATCACACTCCGTCCTTATAGGCCCTCAGATGCTGAGGACTTCTTGACGTATGCCGGTGATGAAAAGGTAACACAATTCACTCGTTGGAACACATTCACCTCTAAGGAAGAAGCACTTTCCTACATCAAGGATTTTTGCATCCCTCACCCTTATTGCAGATCCATCTGCATCCATGACCGTTCGATCGGATTTCTCTTCATCAAGCCACAAGGTGGTGATGACAAGTGTCGAGCAGAGGTGGGATACGCGTTAGCTACTGAGTATTGGGGACAAGGCATAGCAACCAGAGCTGTGAAGATGGCCATAAGTGATGGGTTTAAAGAGCTCACCGATTTGGTCAGAATGCAAGCTCTGGTTTTGGTGGAGAACAGGGCCTCCCAGAGGGTGTTGGAGAAACTTGGGTTCTACAAGGAAGGCCTCTTGAGGAAGTATACTTTTCACAAAGGTGCAGTTCATGATGTTTTCATGTATAGTCTTCTGTTCTCTGATTCTATGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_3

Protein Analysis

174

Amino Acids

19.83

Weight (kDa)

6.9

Isoelectric Point (pI)

36.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001211)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22560
fragaria_vesca	FvH4_4g26610 FvH4_6g03890
malus_domestica	MD04G1217600.v1.1 MD13G1195500.v1.1 MD16G1196300.v1.1
prunus_persica	Prupe.1G016400_v2.0.a1 Prupe.1G016500_v2.0.a1 Prupe.6G337400_v2.0.a1
pyrus_communis	pycom04g19350 pycom13g16770 pycom13g16780
rosa_chinensis	RchiOBHm_Chr3g0452461 RchiOBHm_Chr4g0415671 RchiOBHm_Chr4g0415681 RchiOBHm_Chr4g0415701 RchiOBHm_Chr4g0415711 RchiOBHm_Chr6g0273471
rosa_laevigata	RLG00000008048 RLG00000008049 RLG00000013614 RLG00000025600
rosa_multiflora	Rmu_sc0004536.1_g000003 Rmu_sc0004536.1_g000004 Rmu_sc0011680.1_g000006 Rmu_sc0026940.1_g000001
rosa_roxburghii	Rroxscaffold_5G00355380 Rroxscaffold_6G00429470 Rroxscaffold_7G00195300
rosa_rugosa	Rorug02G0641100 Rorug04G0113600 Rorug04G0113700 Rorug04G0136300 Rorug04G0136400 Rorug06G0075600
rosa_samantha	Rh3AG042800 Rh3BG044500 Rh3CG043100 Rh3DG043900 Rh4AG197200 Rh4AG197300 Rh4BG195700 Rh4BG195800 Rh4CG208000 Rh4CG208100 Rh4CG208300 Rh4DG195000 Rh4DG195100 Rh6AG190300 Rh6BG193800 Rh6CG193300 Rh6DG184900
rosa_wichuraiana	Rw3G003310 Rw4G016770 Rw4G016780 Rw6G016650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	233
AccI	GTMKAC	1 cut(s)	452
AccII	CGCG	1 cut(s)	269
AclWI	GGATC	1 cut(s)	174
AcoI	YGGCCR	1 cut(s)	321
AdeI	CACNNNGTG	1 cut(s)	233
AfiI	CCNNNNNNNGG	2 cut(s)	233, 402
AflIII	ACRYGT	1 cut(s)	267
AleI	CACNNNNGTG	1 cut(s)	465
AloI	GAACNNNNNNTCC	2 cut(s)	380, 412
AluBI	AGCT	4 cut(s)	275, 311, 346, 371
AluI	AGCT	4 cut(s)	275, 311, 346, 371
Alw21I	GWGCWC	1 cut(s)	348
AlwI	GGATC	1 cut(s)	174
AlwNI	CAGNNNCTG	1 cut(s)	53
AoxI	GGCC	4 cut(s)	41, 321, 393, 436
Asp700I	GAANNNNTTC	1 cut(s)	113
AspS9I	GGNCC	2 cut(s)	42, 393
AsuHPI	GGTGA	5 cut(s)	89, 109, 158, 248, 340
BalI	TGGCCA	1 cut(s)	323
BanII	GRGCYC	1 cut(s)	348
BbsI	GAAGAC	1 cut(s)	488
Bbv12I	GWGCWC	1 cut(s)	348
BbvCI	CCTCAGC	1 cut(s)	54
BccI	CCATC	3 cut(s)	191, 313, 326
BciVI	GTATCC	1 cut(s)	257
BfuI	GTATCC	1 cut(s)	257
BmgT120I	GGNCC	2 cut(s)	42, 393
BmsI	GCATC	3 cut(s)	40, 168, 198
BoxI	GACNNNNGTC	1 cut(s)	246
BpiI	GAAGAC	1 cut(s)	488
Bpu10I	CCTNAGC	1 cut(s)	54
BpuEI	CTTGAG	1 cut(s)	463
BsaXI	ACNNNNNCTCC	2 cut(s)	380, 410
Bsc4I	CCNNNNNNNGG	2 cut(s)	233, 402
Bse118I	RCCGGY	1 cut(s)	74
BseGI	GGATG	2 cut(s)	159, 189
BseLI	CCNNNNNNNGG	2 cut(s)	233, 402
BseMII	CTCAG	3 cut(s)	45, 60, 270
BsgI	GTGCAG	1 cut(s)	489
Bsh1236I	CGCG	1 cut(s)	269
Bsh1285I	CGRYCG	1 cut(s)	207
BshFI	GGCC	4 cut(s)	43, 323, 395, 438
BsiEI	CGRYCG	1 cut(s)	207
BsiHKAI	GWGCWC	1 cut(s)	348
BsiSI	CCGG	1 cut(s)	75
BslFI	GGGAC	1 cut(s)	303
BslI	CCNNNNNNNGG	2 cut(s)	233, 402
BsmFI	GGGAC	1 cut(s)	303
BsmI	GAATGC	1 cut(s)	369
BsnI	GGCC	4 cut(s)	43, 323, 395, 438
Bsp1286I	GDGCHC	1 cut(s)	348
Bsp143I	GATC	2 cut(s)	179, 204
BspANI	GGCC	4 cut(s)	43, 323, 395, 438
BspCNI	CTCAG	3 cut(s)	46, 59, 271
BspFNI	CGCG	1 cut(s)	269
BspHI	TCATGA	1 cut(s)	475
BspPI	GGATC	1 cut(s)	174
BsrFI	RCCGGY	1 cut(s)	74
BssAI	RCCGGY	1 cut(s)	74
BssMI	GATC	2 cut(s)	179, 204
BssNAI	GTATAC	1 cut(s)	453
Bst1107I	GTATAC	1 cut(s)	453
Bst4CI	ACNGT	1 cut(s)	200
Bst6I	CTCTTC	1 cut(s)	221
BstC8I	GCNNGC	1 cut(s)	369
BstDEI	CTNAG	4 cut(s)	46, 54, 123, 279
BstENI	CCTNNNNNAGG	1 cut(s)	400
BstF5I	GGATG	2 cut(s)	159, 189
BstFNI	CGCG	1 cut(s)	269
BstKTI	GATC	2 cut(s)	182, 207
BstMBI	GATC	2 cut(s)	179, 204
BstMCI	CGRYCG	1 cut(s)	207
BstMWI	GCNNNNNNNGC	1 cut(s)	308
BstPAI	GACNNNNGTC	1 cut(s)	246
BstUI	CGCG	1 cut(s)	269
BstV2I	GAAGAC	1 cut(s)	488
BstX2I	RGATCY	1 cut(s)	179
BstYI	RGATCY	1 cut(s)	179
BstZ17I	GTATAC	1 cut(s)	453
BsuI	GTATCC	1 cut(s)	257
BsuRI	GGCC	4 cut(s)	43, 323, 395, 438
BtsCI	GGATG	2 cut(s)	159, 189
Cac8I	GCNNGC	1 cut(s)	369
CaiI	CAGNNNCTG	1 cut(s)	53
CciI	TCATGA	1 cut(s)	475
Cfr10I	RCCGGY	1 cut(s)	74
Cfr13I	GGNCC	2 cut(s)	42, 393
CviAII	CATG	3 cut(s)	194, 476, 487
CviJI	RGCY	9 cut(s)	43, 226, 275, 311, 323, 346, 371, 395, 438
CviKI_1	RGCY	9 cut(s)	43, 226, 275, 311, 323, 346, 371, 395, 438
DdeI	CTNAG	4 cut(s)	46, 54, 123, 279
DpnI	GATC	2 cut(s)	181, 206
DpnII	GATC	2 cut(s)	179, 204
DraI	TTTAAA	1 cut(s)	340
DraIII	CACNNNGTG	1 cut(s)	233
EaeI	YGGCCR	1 cut(s)	321
Eam1104I	CTCTTC	1 cut(s)	221
EarI	CTCTTC	1 cut(s)	221
Ecl136II	GAGCTC	1 cut(s)	346
Eco147I	AGGCCT	1 cut(s)	438
Eco24I	GRGCYC	1 cut(s)	348
Eco53kI	GAGCTC	1 cut(s)	346
EcoICRI	GAGCTC	1 cut(s)	346
EcoNI	CCTNNNNNAGG	1 cut(s)	400
EcoO109I	RGGNCCY	2 cut(s)	42, 393
EcoT38I	GRGCYC	1 cut(s)	348
FaeI	CATG	3 cut(s)	197, 479, 490
FalI	AAGNNNNNCTT	2 cut(s)	120, 152
FaqI	GGGAC	1 cut(s)	303
FatI	CATG	3 cut(s)	193, 475, 486
FblI	GTMKAC	1 cut(s)	452
FokI	GGATG	2 cut(s)	146, 176
FriOI	GRGCYC	1 cut(s)	348
HaeIII	GGCC	4 cut(s)	43, 323, 395, 438
HapII	CCGG	1 cut(s)	75
Hin1II	CATG	3 cut(s)	197, 479, 490
HinfI	GANTC	1 cut(s)	509
HpaII	CCGG	1 cut(s)	75
HphI	GGTGA	5 cut(s)	89, 109, 158, 248, 340
Hpy166II	GTNNAC	1 cut(s)	453
Hpy188I	TCNGA	4 cut(s)	49, 209, 362, 508
Hpy188III	TCNNGA	4 cut(s)	17, 64, 442, 476
Hpy8I	GTNNAC	1 cut(s)	453
HpyAV	CCTTC	1 cut(s)	428
HpyCH4III	ACNGT	1 cut(s)	200
HpyCH4IV	ACGT	1 cut(s)	68
HpyCH4V	TGCA	5 cut(s)	159, 177, 189, 367, 470
HpyF10VI	GCNNNNNNNGC	1 cut(s)	308
HpyF3I	CTNAG	4 cut(s)	46, 54, 123, 279
HpySE526I	ACGT	1 cut(s)	68
Hsp92II	CATG	3 cut(s)	197, 479, 490
Kzo9I	GATC	2 cut(s)	179, 204
LpnPI	CCDG	6 cut(s)	2, 88, 319, 359, 376, 413
LweI	GCATC	3 cut(s)	40, 168, 198
MaeII	ACGT	1 cut(s)	68
MaeIII	GTNAC	1 cut(s)	88
MalI	GATC	2 cut(s)	181, 206
MboI	GATC	2 cut(s)	179, 204
MboII	GAAGA	4 cut(s)	140, 208, 328, 488
MflI	RGATCY	1 cut(s)	179
MhlI	GDGCHC	1 cut(s)	348
MlsI	TGGCCA	1 cut(s)	323
MluCI	AATT	2 cut(s)	10, 95
MluI	ACGCGT	1 cut(s)	267
MluNI	TGGCCA	1 cut(s)	323
MmeI	TCCRAC	2 cut(s)	86, 390
MnlI	CCTC	9 cut(s)	49, 55, 130, 174, 250, 396, 406, 438, 449
Mox20I	TGGCCA	1 cut(s)	323
MroXI	GAANNNNTTC	1 cut(s)	113
MscI	TGGCCA	1 cut(s)	323
MseI	TTAA	1 cut(s)	339
MslI	CAYNNNNRTG	1 cut(s)	465
Msp20I	TGGCCA	1 cut(s)	323
MspI	CCGG	1 cut(s)	75
Mva1269I	GAATGC	1 cut(s)	369
MvnI	CGCG	1 cut(s)	269
MwoI	GCNNNNNNNGC	1 cut(s)	308
NdeII	GATC	2 cut(s)	179, 204
NlaIII	CATG	3 cut(s)	197, 479, 490
OliI	CACNNNNGTG	1 cut(s)	465
PagI	TCATGA	1 cut(s)	475
PceI	AGGCCT	1 cut(s)	438
PctI	GAATGC	1 cut(s)	369
PdmI	GAANNNNTTC	1 cut(s)	113
PfeI	GAWTC	1 cut(s)	509
PflMI	CCANNNNNTGG	1 cut(s)	233
Ple19I	CGATCG	1 cut(s)	207
PshAI	GACNNNNGTC	1 cut(s)	246
Psp124BI	GAGCTC	1 cut(s)	348
PspPI	GGNCC	2 cut(s)	42, 393
PstNI	CAGNNNCTG	1 cut(s)	53
PsuI	RGATCY	1 cut(s)	179
PvuI	CGATCG	1 cut(s)	207
RseI	CAYNNNNRTG	1 cut(s)	465
SacI	GAGCTC	1 cut(s)	348
SaqAI	TTAA	1 cut(s)	339
Sau3AI	GATC	2 cut(s)	179, 204
Sau96I	GGNCC	2 cut(s)	42, 393
SduI	GDGCHC	1 cut(s)	348
SfaNI	GCATC	3 cut(s)	40, 168, 198
SmiMI	CAYNNNNRTG	1 cut(s)	465
SmlI	CTYRAG	1 cut(s)	442
SmoI	CTYRAG	1 cut(s)	442
Sse9I	AATT	2 cut(s)	10, 95
SseBI	AGGCCT	1 cut(s)	438
SstI	GAGCTC	1 cut(s)	348
StuI	AGGCCT	1 cut(s)	438
TaaI	ACNGT	1 cut(s)	200
TaiI	ACGT	1 cut(s)	71
TaqI	TCGA	2 cut(s)	203, 250
TasI	AATT	2 cut(s)	10, 95
TfiI	GAWTC	1 cut(s)	509
Tru1I	TTAA	1 cut(s)	339
Tru9I	TTAA	1 cut(s)	339
TspDTI	ATGAA	4 cut(s)	96, 208, 464, 475
TspGWI	ACGGA	1 cut(s)	20
Van91I	CCANNNNNTGG	1 cut(s)	233
XagI	CCTNNNNNAGG	1 cut(s)	400
XmiI	GTMKAC	1 cut(s)	452
XmnI	GAANNNNTTC	1 cut(s)	113

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.