Prupe.1G052900_v2.0.a1

f-box protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
3691182 .. 3692378
1197 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G052900.1

Sequence Viewer

Length: 1146 bp
ATGGCCGACAAAACAGCCATTCTTTCCCAAAAAACAAAACATAGCAGAACAAGTTGGTCCGAACTTCCAATTGACCCTTTTCAACTGATCTTATCAAAACTGTCCCCAGGAAACATACTGCGGCTCGAAGCAGTTTGTCGTCCATGGCTTAAGGCCATCAAATACATCTCGCGCTCATCGCCGTCCTTCACTTGCTTACCAGAGCCGCCGCTGCTCCTTGCTTTTCAAGACGAGGGCAAAGATGGTGCTGGTTTTTACAGTCTTGAAGGCAAGTTTTACAACATGCCTAAACAGTTCTGCCATGGAGATAGTATTTGCATTGGATCCTCTCACGGCTGGCTGCTTTTCTTGAGCAACAAGAAACAACTGCTGCTCTTAAATCCCGTATCTGTAGGGATCCAGCTTCTGCTCCCACCACTTGATACTCTTCTGTATAGCATTGATCCAGTACTCCAGAAGTCTGGGAGACATTGGCGACAAAGGATGCTCAAGGTTGCTGTCTCTTTGCAACCAACCTGCGGCAACAAAAAAAGCATTGGGGTCTTGCTAATGTACAATTACCACGGTTCCAAAGATGGGTGTAACTGTCTTGCTTTCTGCACGCCTGCAGATAACAAGTGGACAAAGCTTGCCGGGCAGAAAGCGTATGTTGATGTTACGAGCGATCGCAATGGCTTCTATGCCTTAAACGTAGATTGCAGCGTTGAAGTCTGGGATTTCACCAATTCCTTGATTCCCATAAAAAAGTTGGAAATTATCCCAGCTGCCAAAACTGGGGCAAGTGATCTGTTCTTGGTTCAGAGGATCAGTTCTTTGCCCATCCCCCAGGTTCGATTCGTTGTTTATAAGCTCGAATATAATAATCGGGATGGTACATGTACATCTGGATGGACAAAGGTGGAATCCTTTGGCAACCAGGCATTGGTTTTGGGTTCGAATCAGTCCATATTCGTCACACCCCAGGAATGTGATCATGAGAACTCAATCTACTTCACCTATGCACCATCTGATGACACCTGTTTTTTATGTGTGTATAATTTGAGAGGGAAAAACATAAAAAGAGTCAGTGATGATCTTGGATTAACAGGGCTTGAAAAACAAGTTTACTGGCTTGAACCTAGTCTTTTTAGCATTGTGGCTAGCTAG

Protein Analysis

382

Amino Acids

42.59

Weight (kDa)

8.68

Isoelectric Point (pI)

43.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 846
Acc36I ACCTGC 1 cut(s) 524
AccB7I CCANNNNNTGG 1 cut(s) 922
AccII CGCG 1 cut(s) 172
AciI CCGC 4 cut(s) 121, 206, 209, 519
AclWI GGATC 6 cut(s) 318, 331, 391, 404, 437, 812
AcoI YGGCCR 1 cut(s) 3
AfaI GTAC 4 cut(s) 450, 554, 874, 880
AfiI CCNNNNNNNGG 4 cut(s) 518, 576, 774, 922
AflII CTTAAG 1 cut(s) 149
AflIII ACRYGT 1 cut(s) 875
AgsI TTSAA 6 cut(s) 83, 227, 266, 707, 1094, 1115
AjnI CCWGG 4 cut(s) 106, 825, 915, 960
AluBI AGCT 5 cut(s) 403, 628, 764, 850, 1143
AluI AGCT 5 cut(s) 403, 628, 764, 850, 1143
Alw26I GTCTC 2 cut(s) 460, 505
AlwI GGATC 6 cut(s) 318, 331, 391, 404, 437, 812
AlwNI CAGNNNCTG 1 cut(s) 406
AoxI GGCC 2 cut(s) 3, 153
ApeKI GCWGC 5 cut(s) 211, 340, 370, 699, 764
AsiSI GCGATCGC 1 cut(s) 667
AspLEI GCGC 1 cut(s) 174
AspS9I GGNCC 1 cut(s) 57
AsuC2I CCSGG 1 cut(s) 634
AsuHPI GGTGA 2 cut(s) 712, 985
AsuII TTCGAA 1 cut(s) 935
AsuNHI GCTAGC 1 cut(s) 1139
AvaII GGWCC 1 cut(s) 57
BamHI GGATCC 2 cut(s) 323, 396
BbvI GCAGC 5 cut(s) 198, 327, 357, 711, 751
BccI CCATC 7 cut(s) 164, 236, 569, 827, 863, 882, 1012
BceAI ACGGC 2 cut(s) 166, 349
BciT130I CCWGG 4 cut(s) 108, 827, 917, 962
BclI TGATCA 1 cut(s) 970
BcnI CCSGG 1 cut(s) 634
BcoDI GTCTC 2 cut(s) 460, 505
BfaI CTAG 3 cut(s) 1119, 1140, 1144
BfmI CTRYAG 2 cut(s) 390, 606
BfrI CTTAAG 1 cut(s) 149
BfuAI ACCTGC 1 cut(s) 524
BisI GCNGC 9 cut(s) 122, 206, 209, 212, 341, 371, 520, 700, 765
BlsI GCNGC 9 cut(s) 123, 207, 210, 213, 342, 372, 521, 701, 766
BmcAI AGTACT 1 cut(s) 450
Bme1390I CCNGG 5 cut(s) 108, 634, 827, 917, 962
Bme18I GGWCC 1 cut(s) 57
BmgT120I GGNCC 1 cut(s) 57
BmiI GGNNCC 3 cut(s) 325, 398, 568
BmrFI CCNGG 5 cut(s) 108, 634, 827, 917, 962
BmrI ACTGGG 1 cut(s) 783
BmsI GCATC 1 cut(s) 474
BmtI GCTAGC 1 cut(s) 1143
BmuI ACTGGG 1 cut(s) 783
BpmI CTGGAG 1 cut(s) 437
Bpu14I TTCGAA 1 cut(s) 935
BpuEI CTTGAG 2 cut(s) 370, 473
BpuMI CCSGG 1 cut(s) 634
BsaJI CCNNGG 6 cut(s) 106, 143, 301, 562, 825, 960
Bsc4I CCNNNNNNNGG 4 cut(s) 518, 576, 774, 922
Bse1I ACTGG 3 cut(s) 446, 778, 1112
Bse3DI GCAATG 1 cut(s) 676
BseBI CCWGG 4 cut(s) 108, 827, 917, 962
BseDI CCNNGG 6 cut(s) 106, 143, 301, 562, 825, 960
BseGI GGATG 4 cut(s) 489, 819, 874, 893
BseLI CCNNNNNNNGG 4 cut(s) 518, 576, 774, 922
BseMI GCAATG 1 cut(s) 676
BseNI ACTGG 3 cut(s) 446, 778, 1112
BseXI GCAGC 5 cut(s) 198, 327, 357, 711, 751
BseYI CCCAGC 1 cut(s) 760
BsgI GTGCAG 1 cut(s) 583
Bsh1236I CGCG 1 cut(s) 172
Bsh1285I CGRYCG 1 cut(s) 667
BshFI GGCC 2 cut(s) 5, 155
BsiEI CGRYCG 1 cut(s) 667
BsiSI CCGG 1 cut(s) 633
BslFI GGGAC 1 cut(s) 88
BslI CCNNNNNNNGG 4 cut(s) 518, 576, 774, 922
BsmAI GTCTC 2 cut(s) 460, 505
BsmFI GGGAC 1 cut(s) 88
BsnI GGCC 2 cut(s) 5, 155
Bsp119I TTCGAA 1 cut(s) 935
Bsp1407I TGTACA 2 cut(s) 552, 878
Bsp143I GATC 9 cut(s) 87, 323, 396, 442, 664, 784, 804, 970, 1072
Bsp19I CCATGG 2 cut(s) 143, 301
BspACI CCGC 4 cut(s) 121, 206, 209, 519
BspANI GGCC 2 cut(s) 5, 155
BspFNI CGCG 1 cut(s) 172
BspHI TCATGA 1 cut(s) 973
BspLI GGNNCC 3 cut(s) 325, 398, 568
BspMAI CTGCAG 1 cut(s) 610
BspMI ACCTGC 1 cut(s) 524
BspOI GCTAGC 1 cut(s) 1143
BspPI GGATC 6 cut(s) 318, 331, 391, 404, 437, 812
BspT104I TTCGAA 1 cut(s) 935
BspTI CTTAAG 1 cut(s) 149
BsrDI GCAATG 1 cut(s) 676
BsrGI TGTACA 2 cut(s) 552, 878
BsrI ACTGG 3 cut(s) 446, 778, 1112
BssECI CCNNGG 6 cut(s) 106, 143, 301, 562, 825, 960
BssMI GATC 9 cut(s) 87, 323, 396, 442, 664, 784, 804, 970, 1072
BssT1I CCWWGG 2 cut(s) 143, 301
Bst2UI CCWGG 4 cut(s) 108, 827, 917, 962
Bst4CI ACNGT 5 cut(s) 102, 260, 294, 566, 587
Bst6I CTCTTC 1 cut(s) 432
BstAFI CTTAAG 1 cut(s) 149
BstAUI TGTACA 2 cut(s) 552, 878
BstBI TTCGAA 1 cut(s) 935
BstC8I GCNNGC 5 cut(s) 338, 602, 606, 630, 1141
BstDSI CCRYGG 3 cut(s) 143, 301, 562
BstF5I GGATG 4 cut(s) 489, 819, 874, 893
BstFNI CGCG 1 cut(s) 172
BstHHI GCGC 1 cut(s) 174
BstKTI GATC 9 cut(s) 90, 326, 399, 445, 667, 787, 807, 973, 1075
BstMAI GTCTC 2 cut(s) 460, 505
BstMBI GATC 9 cut(s) 87, 323, 396, 442, 664, 784, 804, 970, 1072
BstMCI CGRYCG 1 cut(s) 667
BstMWI GCNNNNNNNGC 3 cut(s) 178, 211, 634
BstNI CCWGG 4 cut(s) 108, 827, 917, 962
BstNSI RCATGY 2 cut(s) 286, 879
BstSCI CCNGG 5 cut(s) 106, 632, 825, 915, 960
BstSFI CTRYAG 2 cut(s) 390, 606
BstUI CGCG 1 cut(s) 172
BstV1I GCAGC 5 cut(s) 198, 327, 357, 711, 751
BstX2I RGATCY 2 cut(s) 323, 396
BstXI CCANNNNNNTGG 1 cut(s) 461
BstYI RGATCY 2 cut(s) 323, 396
BsuRI GGCC 2 cut(s) 5, 155
BtgI CCRYGG 3 cut(s) 143, 301, 562
BtgZI GCGATG 1 cut(s) 162
BtsCI GGATG 4 cut(s) 489, 819, 874, 893
BtsIMutI CAGTG 1 cut(s) 1072
BveI ACCTGC 1 cut(s) 524
Cac8I GCNNGC 5 cut(s) 338, 602, 606, 630, 1141
CaiI CAGNNNCTG 1 cut(s) 406
CciI TCATGA 1 cut(s) 973
CfoI GCGC 1 cut(s) 174
Cfr13I GGNCC 1 cut(s) 57
Csp6I GTAC 4 cut(s) 449, 553, 873, 879
CviAII CATG 5 cut(s) 144, 283, 302, 876, 974
CviQI GTAC 4 cut(s) 449, 553, 873, 879
DpnI GATC 9 cut(s) 89, 325, 398, 444, 666, 786, 806, 972, 1074
DpnII GATC 9 cut(s) 87, 323, 396, 442, 664, 784, 804, 970, 1072
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 432
EarI CTCTTC 1 cut(s) 432
Eco130I CCWWGG 2 cut(s) 143, 301
Eco47I GGWCC 1 cut(s) 57
EcoRII CCWGG 4 cut(s) 106, 825, 915, 960
EcoT14I CCWWGG 2 cut(s) 143, 301
ErhI CCWWGG 2 cut(s) 143, 301
FaeI CATG 5 cut(s) 147, 286, 305, 879, 977
FaqI GGGAC 1 cut(s) 88
FatI CATG 5 cut(s) 143, 282, 301, 875, 973
FbaI TGATCA 1 cut(s) 970
Fnu4HI GCNGC 9 cut(s) 122, 206, 209, 212, 341, 371, 520, 700, 765
FokI GGATG 4 cut(s) 496, 806, 881, 900
Fsp4HI GCNGC 9 cut(s) 122, 206, 209, 212, 341, 371, 520, 700, 765
FspBI CTAG 3 cut(s) 1119, 1140, 1144
GlaI GCGC 1 cut(s) 173
GluI GCNGC 9 cut(s) 122, 206, 209, 212, 341, 371, 520, 700, 765
GsaI CCCAGC 1 cut(s) 764
GsuI CTGGAG 1 cut(s) 437
HaeIII GGCC 2 cut(s) 5, 155
HapII CCGG 1 cut(s) 633
HhaI GCGC 1 cut(s) 174
Hin1II CATG 5 cut(s) 147, 286, 305, 879, 977
Hin6I GCGC 1 cut(s) 172
HinP1I GCGC 1 cut(s) 172
HindIII AAGCTT 1 cut(s) 626
HinfI GANTC 5 cut(s) 733, 834, 902, 937, 1062
HpaII CCGG 1 cut(s) 633
HphI GGTGA 2 cut(s) 712, 985
Hpy166II GTNNAC 2 cut(s) 621, 1105
Hpy188I TCNGA 3 cut(s) 61, 801, 1009
Hpy188III TCNNGA 7 cut(s) 227, 263, 349, 454, 866, 885, 974
Hpy8I GTNNAC 2 cut(s) 621, 1105
HpyAV CCTTC 2 cut(s) 196, 260
HpyCH4III ACNGT 5 cut(s) 102, 260, 294, 566, 587
HpyCH4IV ACGT 1 cut(s) 690
HpyCH4V TGCA 6 cut(s) 318, 508, 600, 608, 699, 1001
HpyF10VI GCNNNNNNNGC 3 cut(s) 178, 211, 634
HpySE526I ACGT 1 cut(s) 690
Hsp92II CATG 5 cut(s) 147, 286, 305, 879, 977
HspAI GCGC 1 cut(s) 172
Ksp22I TGATCA 1 cut(s) 970
Kzo9I GATC 9 cut(s) 87, 323, 396, 442, 664, 784, 804, 970, 1072
LmnI GCTCC 2 cut(s) 219, 414
Lsp1109I GCAGC 5 cut(s) 198, 327, 357, 711, 751
LweI GCATC 1 cut(s) 474
MaeI CTAG 3 cut(s) 1119, 1140, 1144
MaeII ACGT 1 cut(s) 690
MaeIII GTNAC 3 cut(s) 581, 655, 952
MalI GATC 9 cut(s) 89, 325, 398, 444, 666, 786, 806, 972, 1074
MboI GATC 9 cut(s) 87, 323, 396, 442, 664, 784, 804, 970, 1072
MboII GAAGA 1 cut(s) 419
MfeI CAATTG 1 cut(s) 69
MflI RGATCY 2 cut(s) 323, 396
MluCI AATT 5 cut(s) 69, 556, 724, 753, 1036
MlyI GAGTC 1 cut(s) 1071
MmeI TCCRAC 1 cut(s) 729
MnlI CCTC 4 cut(s) 226, 337, 795, 1037
MseI TTAA 4 cut(s) 150, 377, 686, 1082
MslI CAYNNNNRTG 1 cut(s) 886
MspA1I CMGCKG 2 cut(s) 211, 764
MspCI CTTAAG 1 cut(s) 149
MspI CCGG 1 cut(s) 633
MspR9I CCNGG 5 cut(s) 108, 634, 827, 917, 962
MunI CAATTG 1 cut(s) 69
MvaI CCWGG 4 cut(s) 108, 827, 917, 962
MvnI CGCG 1 cut(s) 172
MwoI GCNNNNNNNGC 3 cut(s) 178, 211, 634
NciI CCSGG 1 cut(s) 634
NcoI CCATGG 2 cut(s) 143, 301
NdeII GATC 9 cut(s) 87, 323, 396, 442, 664, 784, 804, 970, 1072
NheI GCTAGC 1 cut(s) 1139
NlaIII CATG 5 cut(s) 147, 286, 305, 879, 977
NlaIV GGNNCC 3 cut(s) 325, 398, 568
NmuCI GTSAC 1 cut(s) 952
NspI RCATGY 2 cut(s) 286, 879
NspV TTCGAA 1 cut(s) 935
PagI TCATGA 1 cut(s) 973
PciI ACATGT 1 cut(s) 875
PfeI GAWTC 4 cut(s) 733, 834, 902, 937
PflMI CCANNNNNTGG 1 cut(s) 922
PkrI GCNGC 9 cut(s) 123, 207, 210, 213, 342, 372, 521, 701, 766
Ple19I CGATCG 1 cut(s) 667
PleI GAGTC 1 cut(s) 1070
PpsI GAGTC 1 cut(s) 1070
PscI ACATGT 1 cut(s) 875
PsiI TTATAA 1 cut(s) 846
Psp6I CCWGG 4 cut(s) 106, 825, 915, 960
PspFI CCCAGC 1 cut(s) 760
PspGI CCWGG 4 cut(s) 106, 825, 915, 960
PspN4I GGNNCC 3 cut(s) 325, 398, 568
PspPI GGNCC 1 cut(s) 57
PsrI GAACNNNNNNTAC 2 cut(s) 971, 1003
PstI CTGCAG 1 cut(s) 610
PstNI CAGNNNCTG 1 cut(s) 406
PsuI RGATCY 2 cut(s) 323, 396
PvuI CGATCG 1 cut(s) 667
PvuII CAGCTG 1 cut(s) 764
RgaI GCGATCGC 1 cut(s) 667
RsaI GTAC 4 cut(s) 450, 554, 874, 880
RsaNI GTAC 4 cut(s) 449, 553, 873, 879
RseI CAYNNNNRTG 1 cut(s) 886
SaqAI TTAA 4 cut(s) 150, 377, 686, 1082
SatI GCNGC 9 cut(s) 122, 206, 209, 212, 341, 371, 520, 700, 765
Sau3AI GATC 9 cut(s) 87, 323, 396, 442, 664, 784, 804, 970, 1072
Sau96I GGNCC 1 cut(s) 57
ScaI AGTACT 1 cut(s) 450
SchI GAGTC 1 cut(s) 1071
ScrFI CCNGG 5 cut(s) 108, 634, 827, 917, 962
SfaAI GCGATCGC 1 cut(s) 667
SfaNI GCATC 1 cut(s) 474
SfcI CTRYAG 2 cut(s) 390, 606
SfuI TTCGAA 1 cut(s) 935
SgfI GCGATCGC 1 cut(s) 667
SinI GGWCC 1 cut(s) 57
SmiMI CAYNNNNRTG 1 cut(s) 886
SmlI CTYRAG 3 cut(s) 149, 349, 488
SmoI CTYRAG 3 cut(s) 149, 349, 488
Sse9I AATT 5 cut(s) 69, 556, 724, 753, 1036
SsiI CCGC 4 cut(s) 121, 206, 209, 519
SspMI CTAG 3 cut(s) 1119, 1140, 1144
StyD4I CCNGG 5 cut(s) 106, 632, 825, 915, 960
StyI CCWWGG 2 cut(s) 143, 301
TaaI ACNGT 5 cut(s) 102, 260, 294, 566, 587
TaiI ACGT 1 cut(s) 693
TaqI TCGA 4 cut(s) 126, 832, 852, 935
TasI AATT 5 cut(s) 69, 556, 724, 753, 1036
TatI WGTACW 3 cut(s) 448, 552, 878
TauI GCSGC 4 cut(s) 124, 208, 211, 522
TfiI GAWTC 4 cut(s) 733, 834, 902, 937
Tru1I TTAA 4 cut(s) 150, 377, 686, 1082
Tru9I TTAA 4 cut(s) 150, 377, 686, 1082
TscAI CASTG 1 cut(s) 1072
TseFI GTSAC 1 cut(s) 952
TseI GCWGC 5 cut(s) 211, 340, 370, 699, 764
Tsp45I GTSAC 1 cut(s) 952
TspRI CASTG 1 cut(s) 1072
Van91I CCANNNNNTGG 1 cut(s) 922
Vha464I CTTAAG 1 cut(s) 149
VpaK11BI GGWCC 1 cut(s) 57
XceI RCATGY 2 cut(s) 286, 879
XcmI CCANNNNNNNNNTGG 1 cut(s) 745
XspI CTAG 3 cut(s) 1119, 1140, 1144
ZrmI AGTACT 1 cut(s) 450
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.