f-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g15921 FvH4_4g04632 FvH4_4g05202 FvH4_4g05500 FvH4_7g24700 |
| prunus_persica | Prupe.1G052900_v2.0.a1 Prupe.1G053000_v2.0.a1 |
| rosa_laevigata | RLG00000032962 |
| rosa_multiflora | Rmu_sc0002021.1_g000018 Rmu_sc0004598.1_g000005 Rmu_sc0010817.1_g000006 Rmu_sc0021895.1_g000002 Rmu_sc0021895.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00052700 Rroxscaffold_4G00286440 |
| rosa_rugosa | Rorug03G0352300 Rorug03G0357300 |
| rosa_samantha | Rh1AG366800 Rh1BG330300 Rh1CG343200 Rh1CG344600 Rh1DG361800 Rh4AG059700 Rh4BG058300 Rh4CG064000 Rh4DG054900 Rh4DG061400 Rh4DG061600 Rh5BG185200 Rh5CG205200 |
| rosa_wichuraiana | Rw1G032280 Rw4G004780 Rw5G017140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 846 |
| Acc36I | ACCTGC | 1 cut(s) | 524 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 922 |
| AccII | CGCG | 1 cut(s) | 172 |
| AciI | CCGC | 4 cut(s) | 121, 206, 209, 519 |
| AclWI | GGATC | 6 cut(s) | 318, 331, 391, 404, 437, 812 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AfaI | GTAC | 4 cut(s) | 450, 554, 874, 880 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 518, 576, 774, 922 |
| AflII | CTTAAG | 1 cut(s) | 149 |
| AflIII | ACRYGT | 1 cut(s) | 875 |
| AgsI | TTSAA | 6 cut(s) | 83, 227, 266, 707, 1094, 1115 |
| AjnI | CCWGG | 4 cut(s) | 106, 825, 915, 960 |
| AluBI | AGCT | 5 cut(s) | 403, 628, 764, 850, 1143 |
| AluI | AGCT | 5 cut(s) | 403, 628, 764, 850, 1143 |
| Alw26I | GTCTC | 2 cut(s) | 460, 505 |
| AlwI | GGATC | 6 cut(s) | 318, 331, 391, 404, 437, 812 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 406 |
| AoxI | GGCC | 2 cut(s) | 3, 153 |
| ApeKI | GCWGC | 5 cut(s) | 211, 340, 370, 699, 764 |
| AsiSI | GCGATCGC | 1 cut(s) | 667 |
| AspLEI | GCGC | 1 cut(s) | 174 |
| AspS9I | GGNCC | 1 cut(s) | 57 |
| AsuC2I | CCSGG | 1 cut(s) | 634 |
| AsuHPI | GGTGA | 2 cut(s) | 712, 985 |
| AsuII | TTCGAA | 1 cut(s) | 935 |
| AsuNHI | GCTAGC | 1 cut(s) | 1139 |
| AvaII | GGWCC | 1 cut(s) | 57 |
| BamHI | GGATCC | 2 cut(s) | 323, 396 |
| BbvI | GCAGC | 5 cut(s) | 198, 327, 357, 711, 751 |
| BccI | CCATC | 7 cut(s) | 164, 236, 569, 827, 863, 882, 1012 |
| BceAI | ACGGC | 2 cut(s) | 166, 349 |
| BciT130I | CCWGG | 4 cut(s) | 108, 827, 917, 962 |
| BclI | TGATCA | 1 cut(s) | 970 |
| BcnI | CCSGG | 1 cut(s) | 634 |
| BcoDI | GTCTC | 2 cut(s) | 460, 505 |
| BfaI | CTAG | 3 cut(s) | 1119, 1140, 1144 |
| BfmI | CTRYAG | 2 cut(s) | 390, 606 |
| BfrI | CTTAAG | 1 cut(s) | 149 |
| BfuAI | ACCTGC | 1 cut(s) | 524 |
| BisI | GCNGC | 9 cut(s) | 122, 206, 209, 212, 341, 371, 520, 700, 765 |
| BlsI | GCNGC | 9 cut(s) | 123, 207, 210, 213, 342, 372, 521, 701, 766 |
| BmcAI | AGTACT | 1 cut(s) | 450 |
| Bme1390I | CCNGG | 5 cut(s) | 108, 634, 827, 917, 962 |
| Bme18I | GGWCC | 1 cut(s) | 57 |
| BmgT120I | GGNCC | 1 cut(s) | 57 |
| BmiI | GGNNCC | 3 cut(s) | 325, 398, 568 |
| BmrFI | CCNGG | 5 cut(s) | 108, 634, 827, 917, 962 |
| BmrI | ACTGGG | 1 cut(s) | 783 |
| BmsI | GCATC | 1 cut(s) | 474 |
| BmtI | GCTAGC | 1 cut(s) | 1143 |
| BmuI | ACTGGG | 1 cut(s) | 783 |
| BpmI | CTGGAG | 1 cut(s) | 437 |
| Bpu14I | TTCGAA | 1 cut(s) | 935 |
| BpuEI | CTTGAG | 2 cut(s) | 370, 473 |
| BpuMI | CCSGG | 1 cut(s) | 634 |
| BsaJI | CCNNGG | 6 cut(s) | 106, 143, 301, 562, 825, 960 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 518, 576, 774, 922 |
| Bse1I | ACTGG | 3 cut(s) | 446, 778, 1112 |
| Bse3DI | GCAATG | 1 cut(s) | 676 |
| BseBI | CCWGG | 4 cut(s) | 108, 827, 917, 962 |
| BseDI | CCNNGG | 6 cut(s) | 106, 143, 301, 562, 825, 960 |
| BseGI | GGATG | 4 cut(s) | 489, 819, 874, 893 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 518, 576, 774, 922 |
| BseMI | GCAATG | 1 cut(s) | 676 |
| BseNI | ACTGG | 3 cut(s) | 446, 778, 1112 |
| BseXI | GCAGC | 5 cut(s) | 198, 327, 357, 711, 751 |
| BseYI | CCCAGC | 1 cut(s) | 760 |
| BsgI | GTGCAG | 1 cut(s) | 583 |
| Bsh1236I | CGCG | 1 cut(s) | 172 |
| Bsh1285I | CGRYCG | 1 cut(s) | 667 |
| BshFI | GGCC | 2 cut(s) | 5, 155 |
| BsiEI | CGRYCG | 1 cut(s) | 667 |
| BsiSI | CCGG | 1 cut(s) | 633 |
| BslFI | GGGAC | 1 cut(s) | 88 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 518, 576, 774, 922 |
| BsmAI | GTCTC | 2 cut(s) | 460, 505 |
| BsmFI | GGGAC | 1 cut(s) | 88 |
| BsnI | GGCC | 2 cut(s) | 5, 155 |
| Bsp119I | TTCGAA | 1 cut(s) | 935 |
| Bsp1407I | TGTACA | 2 cut(s) | 552, 878 |
| Bsp143I | GATC | 9 cut(s) | 87, 323, 396, 442, 664, 784, 804, 970, 1072 |
| Bsp19I | CCATGG | 2 cut(s) | 143, 301 |
| BspACI | CCGC | 4 cut(s) | 121, 206, 209, 519 |
| BspANI | GGCC | 2 cut(s) | 5, 155 |
| BspFNI | CGCG | 1 cut(s) | 172 |
| BspHI | TCATGA | 1 cut(s) | 973 |
| BspLI | GGNNCC | 3 cut(s) | 325, 398, 568 |
| BspMAI | CTGCAG | 1 cut(s) | 610 |
| BspMI | ACCTGC | 1 cut(s) | 524 |
| BspOI | GCTAGC | 1 cut(s) | 1143 |
| BspPI | GGATC | 6 cut(s) | 318, 331, 391, 404, 437, 812 |
| BspT104I | TTCGAA | 1 cut(s) | 935 |
| BspTI | CTTAAG | 1 cut(s) | 149 |
| BsrDI | GCAATG | 1 cut(s) | 676 |
| BsrGI | TGTACA | 2 cut(s) | 552, 878 |
| BsrI | ACTGG | 3 cut(s) | 446, 778, 1112 |
| BssECI | CCNNGG | 6 cut(s) | 106, 143, 301, 562, 825, 960 |
| BssMI | GATC | 9 cut(s) | 87, 323, 396, 442, 664, 784, 804, 970, 1072 |
| BssT1I | CCWWGG | 2 cut(s) | 143, 301 |
| Bst2UI | CCWGG | 4 cut(s) | 108, 827, 917, 962 |
| Bst4CI | ACNGT | 5 cut(s) | 102, 260, 294, 566, 587 |
| Bst6I | CTCTTC | 1 cut(s) | 432 |
| BstAFI | CTTAAG | 1 cut(s) | 149 |
| BstAUI | TGTACA | 2 cut(s) | 552, 878 |
| BstBI | TTCGAA | 1 cut(s) | 935 |
| BstC8I | GCNNGC | 5 cut(s) | 338, 602, 606, 630, 1141 |
| BstDSI | CCRYGG | 3 cut(s) | 143, 301, 562 |
| BstF5I | GGATG | 4 cut(s) | 489, 819, 874, 893 |
| BstFNI | CGCG | 1 cut(s) | 172 |
| BstHHI | GCGC | 1 cut(s) | 174 |
| BstKTI | GATC | 9 cut(s) | 90, 326, 399, 445, 667, 787, 807, 973, 1075 |
| BstMAI | GTCTC | 2 cut(s) | 460, 505 |
| BstMBI | GATC | 9 cut(s) | 87, 323, 396, 442, 664, 784, 804, 970, 1072 |
| BstMCI | CGRYCG | 1 cut(s) | 667 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 178, 211, 634 |
| BstNI | CCWGG | 4 cut(s) | 108, 827, 917, 962 |
| BstNSI | RCATGY | 2 cut(s) | 286, 879 |
| BstSCI | CCNGG | 5 cut(s) | 106, 632, 825, 915, 960 |
| BstSFI | CTRYAG | 2 cut(s) | 390, 606 |
| BstUI | CGCG | 1 cut(s) | 172 |
| BstV1I | GCAGC | 5 cut(s) | 198, 327, 357, 711, 751 |
| BstX2I | RGATCY | 2 cut(s) | 323, 396 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 461 |
| BstYI | RGATCY | 2 cut(s) | 323, 396 |
| BsuRI | GGCC | 2 cut(s) | 5, 155 |
| BtgI | CCRYGG | 3 cut(s) | 143, 301, 562 |
| BtgZI | GCGATG | 1 cut(s) | 162 |
| BtsCI | GGATG | 4 cut(s) | 489, 819, 874, 893 |
| BtsIMutI | CAGTG | 1 cut(s) | 1072 |
| BveI | ACCTGC | 1 cut(s) | 524 |
| Cac8I | GCNNGC | 5 cut(s) | 338, 602, 606, 630, 1141 |
| CaiI | CAGNNNCTG | 1 cut(s) | 406 |
| CciI | TCATGA | 1 cut(s) | 973 |
| CfoI | GCGC | 1 cut(s) | 174 |
| Cfr13I | GGNCC | 1 cut(s) | 57 |
| Csp6I | GTAC | 4 cut(s) | 449, 553, 873, 879 |
| CviAII | CATG | 5 cut(s) | 144, 283, 302, 876, 974 |
| CviQI | GTAC | 4 cut(s) | 449, 553, 873, 879 |
| DpnI | GATC | 9 cut(s) | 89, 325, 398, 444, 666, 786, 806, 972, 1074 |
| DpnII | GATC | 9 cut(s) | 87, 323, 396, 442, 664, 784, 804, 970, 1072 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 1 cut(s) | 432 |
| EarI | CTCTTC | 1 cut(s) | 432 |
| Eco130I | CCWWGG | 2 cut(s) | 143, 301 |
| Eco47I | GGWCC | 1 cut(s) | 57 |
| EcoRII | CCWGG | 4 cut(s) | 106, 825, 915, 960 |
| EcoT14I | CCWWGG | 2 cut(s) | 143, 301 |
| ErhI | CCWWGG | 2 cut(s) | 143, 301 |
| FaeI | CATG | 5 cut(s) | 147, 286, 305, 879, 977 |
| FaqI | GGGAC | 1 cut(s) | 88 |
| FatI | CATG | 5 cut(s) | 143, 282, 301, 875, 973 |
| FbaI | TGATCA | 1 cut(s) | 970 |
| Fnu4HI | GCNGC | 9 cut(s) | 122, 206, 209, 212, 341, 371, 520, 700, 765 |
| FokI | GGATG | 4 cut(s) | 496, 806, 881, 900 |
| Fsp4HI | GCNGC | 9 cut(s) | 122, 206, 209, 212, 341, 371, 520, 700, 765 |
| FspBI | CTAG | 3 cut(s) | 1119, 1140, 1144 |
| GlaI | GCGC | 1 cut(s) | 173 |
| GluI | GCNGC | 9 cut(s) | 122, 206, 209, 212, 341, 371, 520, 700, 765 |
| GsaI | CCCAGC | 1 cut(s) | 764 |
| GsuI | CTGGAG | 1 cut(s) | 437 |
| HaeIII | GGCC | 2 cut(s) | 5, 155 |
| HapII | CCGG | 1 cut(s) | 633 |
| HhaI | GCGC | 1 cut(s) | 174 |
| Hin1II | CATG | 5 cut(s) | 147, 286, 305, 879, 977 |
| Hin6I | GCGC | 1 cut(s) | 172 |
| HinP1I | GCGC | 1 cut(s) | 172 |
| HindIII | AAGCTT | 1 cut(s) | 626 |
| HinfI | GANTC | 5 cut(s) | 733, 834, 902, 937, 1062 |
| HpaII | CCGG | 1 cut(s) | 633 |
| HphI | GGTGA | 2 cut(s) | 712, 985 |
| Hpy166II | GTNNAC | 2 cut(s) | 621, 1105 |
| Hpy188I | TCNGA | 3 cut(s) | 61, 801, 1009 |
| Hpy188III | TCNNGA | 7 cut(s) | 227, 263, 349, 454, 866, 885, 974 |
| Hpy8I | GTNNAC | 2 cut(s) | 621, 1105 |
| HpyAV | CCTTC | 2 cut(s) | 196, 260 |
| HpyCH4III | ACNGT | 5 cut(s) | 102, 260, 294, 566, 587 |
| HpyCH4IV | ACGT | 1 cut(s) | 690 |
| HpyCH4V | TGCA | 6 cut(s) | 318, 508, 600, 608, 699, 1001 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 178, 211, 634 |
| HpySE526I | ACGT | 1 cut(s) | 690 |
| Hsp92II | CATG | 5 cut(s) | 147, 286, 305, 879, 977 |
| HspAI | GCGC | 1 cut(s) | 172 |
| Ksp22I | TGATCA | 1 cut(s) | 970 |
| Kzo9I | GATC | 9 cut(s) | 87, 323, 396, 442, 664, 784, 804, 970, 1072 |
| LmnI | GCTCC | 2 cut(s) | 219, 414 |
| Lsp1109I | GCAGC | 5 cut(s) | 198, 327, 357, 711, 751 |
| LweI | GCATC | 1 cut(s) | 474 |
| MaeI | CTAG | 3 cut(s) | 1119, 1140, 1144 |
| MaeII | ACGT | 1 cut(s) | 690 |
| MaeIII | GTNAC | 3 cut(s) | 581, 655, 952 |
| MalI | GATC | 9 cut(s) | 89, 325, 398, 444, 666, 786, 806, 972, 1074 |
| MboI | GATC | 9 cut(s) | 87, 323, 396, 442, 664, 784, 804, 970, 1072 |
| MboII | GAAGA | 1 cut(s) | 419 |
| MfeI | CAATTG | 1 cut(s) | 69 |
| MflI | RGATCY | 2 cut(s) | 323, 396 |
| MluCI | AATT | 5 cut(s) | 69, 556, 724, 753, 1036 |
| MlyI | GAGTC | 1 cut(s) | 1071 |
| MmeI | TCCRAC | 1 cut(s) | 729 |
| MnlI | CCTC | 4 cut(s) | 226, 337, 795, 1037 |
| MseI | TTAA | 4 cut(s) | 150, 377, 686, 1082 |
| MslI | CAYNNNNRTG | 1 cut(s) | 886 |
| MspA1I | CMGCKG | 2 cut(s) | 211, 764 |
| MspCI | CTTAAG | 1 cut(s) | 149 |
| MspI | CCGG | 1 cut(s) | 633 |
| MspR9I | CCNGG | 5 cut(s) | 108, 634, 827, 917, 962 |
| MunI | CAATTG | 1 cut(s) | 69 |
| MvaI | CCWGG | 4 cut(s) | 108, 827, 917, 962 |
| MvnI | CGCG | 1 cut(s) | 172 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 178, 211, 634 |
| NciI | CCSGG | 1 cut(s) | 634 |
| NcoI | CCATGG | 2 cut(s) | 143, 301 |
| NdeII | GATC | 9 cut(s) | 87, 323, 396, 442, 664, 784, 804, 970, 1072 |
| NheI | GCTAGC | 1 cut(s) | 1139 |
| NlaIII | CATG | 5 cut(s) | 147, 286, 305, 879, 977 |
| NlaIV | GGNNCC | 3 cut(s) | 325, 398, 568 |
| NmuCI | GTSAC | 1 cut(s) | 952 |
| NspI | RCATGY | 2 cut(s) | 286, 879 |
| NspV | TTCGAA | 1 cut(s) | 935 |
| PagI | TCATGA | 1 cut(s) | 973 |
| PciI | ACATGT | 1 cut(s) | 875 |
| PfeI | GAWTC | 4 cut(s) | 733, 834, 902, 937 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 922 |
| PkrI | GCNGC | 9 cut(s) | 123, 207, 210, 213, 342, 372, 521, 701, 766 |
| Ple19I | CGATCG | 1 cut(s) | 667 |
| PleI | GAGTC | 1 cut(s) | 1070 |
| PpsI | GAGTC | 1 cut(s) | 1070 |
| PscI | ACATGT | 1 cut(s) | 875 |
| PsiI | TTATAA | 1 cut(s) | 846 |
| Psp6I | CCWGG | 4 cut(s) | 106, 825, 915, 960 |
| PspFI | CCCAGC | 1 cut(s) | 760 |
| PspGI | CCWGG | 4 cut(s) | 106, 825, 915, 960 |
| PspN4I | GGNNCC | 3 cut(s) | 325, 398, 568 |
| PspPI | GGNCC | 1 cut(s) | 57 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 971, 1003 |
| PstI | CTGCAG | 1 cut(s) | 610 |
| PstNI | CAGNNNCTG | 1 cut(s) | 406 |
| PsuI | RGATCY | 2 cut(s) | 323, 396 |
| PvuI | CGATCG | 1 cut(s) | 667 |
| PvuII | CAGCTG | 1 cut(s) | 764 |
| RgaI | GCGATCGC | 1 cut(s) | 667 |
| RsaI | GTAC | 4 cut(s) | 450, 554, 874, 880 |
| RsaNI | GTAC | 4 cut(s) | 449, 553, 873, 879 |
| RseI | CAYNNNNRTG | 1 cut(s) | 886 |
| SaqAI | TTAA | 4 cut(s) | 150, 377, 686, 1082 |
| SatI | GCNGC | 9 cut(s) | 122, 206, 209, 212, 341, 371, 520, 700, 765 |
| Sau3AI | GATC | 9 cut(s) | 87, 323, 396, 442, 664, 784, 804, 970, 1072 |
| Sau96I | GGNCC | 1 cut(s) | 57 |
| ScaI | AGTACT | 1 cut(s) | 450 |
| SchI | GAGTC | 1 cut(s) | 1071 |
| ScrFI | CCNGG | 5 cut(s) | 108, 634, 827, 917, 962 |
| SfaAI | GCGATCGC | 1 cut(s) | 667 |
| SfaNI | GCATC | 1 cut(s) | 474 |
| SfcI | CTRYAG | 2 cut(s) | 390, 606 |
| SfuI | TTCGAA | 1 cut(s) | 935 |
| SgfI | GCGATCGC | 1 cut(s) | 667 |
| SinI | GGWCC | 1 cut(s) | 57 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 886 |
| SmlI | CTYRAG | 3 cut(s) | 149, 349, 488 |
| SmoI | CTYRAG | 3 cut(s) | 149, 349, 488 |
| Sse9I | AATT | 5 cut(s) | 69, 556, 724, 753, 1036 |
| SsiI | CCGC | 4 cut(s) | 121, 206, 209, 519 |
| SspMI | CTAG | 3 cut(s) | 1119, 1140, 1144 |
| StyD4I | CCNGG | 5 cut(s) | 106, 632, 825, 915, 960 |
| StyI | CCWWGG | 2 cut(s) | 143, 301 |
| TaaI | ACNGT | 5 cut(s) | 102, 260, 294, 566, 587 |
| TaiI | ACGT | 1 cut(s) | 693 |
| TaqI | TCGA | 4 cut(s) | 126, 832, 852, 935 |
| TasI | AATT | 5 cut(s) | 69, 556, 724, 753, 1036 |
| TatI | WGTACW | 3 cut(s) | 448, 552, 878 |
| TauI | GCSGC | 4 cut(s) | 124, 208, 211, 522 |
| TfiI | GAWTC | 4 cut(s) | 733, 834, 902, 937 |
| Tru1I | TTAA | 4 cut(s) | 150, 377, 686, 1082 |
| Tru9I | TTAA | 4 cut(s) | 150, 377, 686, 1082 |
| TscAI | CASTG | 1 cut(s) | 1072 |
| TseFI | GTSAC | 1 cut(s) | 952 |
| TseI | GCWGC | 5 cut(s) | 211, 340, 370, 699, 764 |
| Tsp45I | GTSAC | 1 cut(s) | 952 |
| TspRI | CASTG | 1 cut(s) | 1072 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 922 |
| Vha464I | CTTAAG | 1 cut(s) | 149 |
| VpaK11BI | GGWCC | 1 cut(s) | 57 |
| XceI | RCATGY | 2 cut(s) | 286, 879 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 745 |
| XspI | CTAG | 3 cut(s) | 1119, 1140, 1144 |
| ZrmI | AGTACT | 1 cut(s) | 450 |