Prupe.1G053000_v2.0.a1

f-box protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
3697545 .. 3699044
1500 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G053000.1

Sequence Viewer

Length: 1260 bp
ATGGCTGACAAAGTAGCCATTGGATCCAACAAAACAGAACATAGCAGCAGAGCAAATTGGTCCCAACTCCCAATTGACCCTTTTCAATTGATCTTATCAAAACTGTCCGTACGAAACATAAAGCCGCTCGAAGCAGTTTGTCGTCCATGGCTTAAGGCCATCAAATACATTTCATCGTCATCGCCGTCCTTTCCTTGCTTACTAGAGCCACCACGGCTCCTTCTTTTTCGAGACGAGGACAACGATGGCGGTCGCCTGTCTGGTTTTTGCAGTCTTAAAGGCAAGTTTTACAGCTTGATGAACATACCTAAACGGTTAGGCGATGGATATACTATTTGCATTGGGTCCTCTCACGGCTGGCTGCTTTTCTTGACGAACAAGAAACGATTGCTGCTTGTAAATCCCGCATCTGCAGCGGCTCCGCTTCTTCTCCCACCACTCAATACTTTTCCGGATATAGATAGCATTATGTATCAATATCCTCCTATGGAAGATTCAGGAATTTTTCTCCTCAAGGGAACGTGTGGATACTGGCGAAAATGGATGTGCAAGGTTGTTCTGTCTTCGCCACCAACCTGCAACAACAAAAACAACATTGGGGTTTTGCTAATGTACAATGTCGGAGATGGGCGTAACCGTCTTGCTTTCTGCACGCCTGCAGATAACAAATGGACAAAGCTTGACGAGCACGAACGGTACCTAGATGTTACGAGTGATTGCCATCGCCTTTATGCGTTACGCGAAGATTACAGTGTTGAAGTCTGGGGTTTCCCCAACTCCTCTGCCATCAAAAAGTTGGAAACTATCCCAGCTGGTGCTCCCATGGTACCAAAGTTAAATTATGATTTCCAGCTTTACATGGACAAAACTGATGCCACTGATCTGTTTTTGGTCAAAACTGGAGCAAGTGATCTGTTCTTGGTTGCGATGGTCGACTCTTCTGCCTGGGAAAGGGTTCGATTTGATGTTTATAAGCTCGAATATAATCCGGATGGTACATCTAGATGGAGAAGGGTGGACTCCATTGGCAAGTATGCAGTGGTTTTGGGTTCAAACCACTCCATATTAATCTCACCCCAGGAATTTGATCATGCTCCAGGATATCATGAGAATTCCATCTACTTCCTCCATGCATCATCTTCTTTCAGCTATGATTTAATTGTCTATAATGTGAGAGAGATAGAACCGAAAAAGGTCGGTTATCTGGGATTATTAAAGCAACCAGCTTACTGGCTCGAACGTTATCCTTTAGCACTGTAG

Protein Analysis

420

Amino Acids

47.54

Weight (kDa)

8.55

Isoelectric Point (pI)

45.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 972
Acc36I ACCTGC 1 cut(s) 584
Acc65I GGTACC 2 cut(s) 696, 826
AccB1I GGYRCC 2 cut(s) 696, 826
AccBSI CCGCTC 1 cut(s) 127
AccI GTMKAC 1 cut(s) 933
AccII CGCG 1 cut(s) 741
AccIII TCCGGA 2 cut(s) 451, 988
AciI CCGC 5 cut(s) 125, 249, 405, 416, 422
AclI AACGTT 1 cut(s) 1240
AclWI GGATC 2 cut(s) 18, 31
AcsI RAATTY 3 cut(s) 501, 1082, 1111
AfaI GTAC 5 cut(s) 111, 614, 698, 828, 997
AfiI CCNNNNNNNGG 1 cut(s) 951
AflII CTTAAG 1 cut(s) 152
AflIII ACRYGT 1 cut(s) 521
AgsI TTSAA 3 cut(s) 86, 758, 1053
AjnI CCWGG 3 cut(s) 944, 1077, 1096
AluBI AGCT 7 cut(s) 294, 679, 812, 853, 976, 1149, 1226
AluI AGCT 7 cut(s) 294, 679, 812, 853, 976, 1149, 1226
Alw21I GWGCWC 2 cut(s) 690, 820
Alw26I GTCTC 1 cut(s) 225
AlwI GGATC 2 cut(s) 18, 31
Aor13HI TCCGGA 2 cut(s) 451, 988
AoxI GGCC 1 cut(s) 156
ApeKI GCWGC 4 cut(s) 45, 361, 391, 413
ApoI RAATTY 3 cut(s) 501, 1082, 1111
AseI ATTAAT 1 cut(s) 1067
Asp700I GAANNNNTTC 1 cut(s) 954
Asp718I GGTACC 2 cut(s) 696, 826
AspS9I GGNCC 2 cut(s) 60, 345
AsuHPI GGTGA 1 cut(s) 1065
AvaII GGWCC 2 cut(s) 60, 345
BaeI ACNNNNGTAYC 2 cut(s) 818, 851
BamHI GGATCC 1 cut(s) 23
BanI GGYRCC 2 cut(s) 696, 826
BbsI GAAGAC 1 cut(s) 555
Bbv12I GWGCWC 2 cut(s) 690, 820
BbvI GCAGC 4 cut(s) 57, 348, 378, 425
BceAI ACGGC 3 cut(s) 169, 230, 370
BcgI CGANNNNNNTGC 2 cut(s) 923, 957
BciT130I CCWGG 3 cut(s) 946, 1079, 1098
BciVI GTATCC 1 cut(s) 521
BclI TGATCA 1 cut(s) 1087
BcoDI GTCTC 1 cut(s) 225
BfaI CTAG 3 cut(s) 203, 701, 1002
BfmI CTRYAG 3 cut(s) 411, 657, 1256
BfrI CTTAAG 1 cut(s) 152
BfuAI ACCTGC 1 cut(s) 584
BfuI GTATCC 1 cut(s) 521
BglI GCCNNNNNGGC 1 cut(s) 214
BisI GCNGC 6 cut(s) 46, 125, 362, 392, 414, 417
BlsI GCNGC 6 cut(s) 47, 126, 363, 393, 415, 418
Bme1390I CCNGG 3 cut(s) 946, 1079, 1098
Bme18I GGWCC 2 cut(s) 60, 345
BmgT120I GGNCC 2 cut(s) 60, 345
BmiI GGNNCC 7 cut(s) 25, 62, 218, 346, 420, 698, 828
BmrFI CCNGG 3 cut(s) 946, 1079, 1098
BmsI GCATC 3 cut(s) 416, 862, 1142
BpiI GAAGAC 1 cut(s) 555
BpmI CTGGAG 2 cut(s) 921, 1080
BpuEI CTTGAG 1 cut(s) 497
BsaBI GATNNNNATC 1 cut(s) 720
BsaJI CCNNGG 5 cut(s) 146, 212, 822, 945, 1077
BsaWI WCCGGW 2 cut(s) 451, 988
BsaXI ACNNNNNCTCC 2 cut(s) 201, 231
Bsc4I CCNNNNNNNGG 1 cut(s) 951
Bse1I ACTGG 3 cut(s) 536, 904, 1235
Bse8I GATNNNNATC 1 cut(s) 720
BseAI TCCGGA 2 cut(s) 451, 988
BseBI CCWGG 3 cut(s) 946, 1079, 1098
BseDI CCNNGG 5 cut(s) 146, 212, 822, 945, 1077
BseGI GGATG 2 cut(s) 549, 997
BseJI GATNNNNATC 1 cut(s) 720
BseLI CCNNNNNNNGG 1 cut(s) 951
BseNI ACTGG 3 cut(s) 536, 904, 1235
BseRI GAGGAG 2 cut(s) 500, 769
BseXI GCAGC 4 cut(s) 57, 348, 378, 425
BseYI CCCAGC 1 cut(s) 808
BsgI GTGCAG 1 cut(s) 634
Bsh1236I CGCG 1 cut(s) 741
Bsh1285I CGRYCG 1 cut(s) 253
BshFI GGCC 1 cut(s) 158
BshNI GGYRCC 2 cut(s) 696, 826
BsiEI CGRYCG 1 cut(s) 253
BsiHKAI GWGCWC 2 cut(s) 690, 820
BsiSI CCGG 2 cut(s) 452, 989
BsiWI CGTACG 1 cut(s) 109
BslFI GGGAC 1 cut(s) 46
BslI CCNNNNNNNGG 1 cut(s) 951
BsmAI GTCTC 1 cut(s) 225
BsmBI CGTCTC 1 cut(s) 225
BsmFI GGGAC 1 cut(s) 46
BsnI GGCC 1 cut(s) 158
Bsp1286I GDGCHC 2 cut(s) 690, 820
Bsp13I TCCGGA 2 cut(s) 451, 988
Bsp1407I TGTACA 1 cut(s) 612
Bsp143I GATC 5 cut(s) 23, 90, 880, 910, 1087
Bsp19I CCATGG 2 cut(s) 146, 822
BspACI CCGC 5 cut(s) 125, 249, 405, 416, 422
BspANI GGCC 1 cut(s) 158
BspEI TCCGGA 2 cut(s) 451, 988
BspFNI CGCG 1 cut(s) 741
BspHI TCATGA 1 cut(s) 1105
BspLI GGNNCC 7 cut(s) 25, 62, 218, 346, 420, 698, 828
BspMAI CTGCAG 2 cut(s) 415, 661
BspMI ACCTGC 1 cut(s) 584
BspPI GGATC 2 cut(s) 18, 31
BspT107I GGYRCC 2 cut(s) 696, 826
BspTI CTTAAG 1 cut(s) 152
BsrBI CCGCTC 1 cut(s) 127
BsrGI TGTACA 1 cut(s) 612
BsrI ACTGG 3 cut(s) 536, 904, 1235
BssECI CCNNGG 5 cut(s) 146, 212, 822, 945, 1077
BssMI GATC 5 cut(s) 23, 90, 880, 910, 1087
BssT1I CCWWGG 2 cut(s) 146, 822
Bst2UI CCWGG 3 cut(s) 946, 1079, 1098
Bst4CI ACNGT 6 cut(s) 105, 315, 638, 696, 752, 1257
Bst6I CTCTTC 1 cut(s) 943
BstAFI CTTAAG 1 cut(s) 152
BstAUI TGTACA 1 cut(s) 612
BstC8I GCNNGC 3 cut(s) 359, 653, 657
BstDSI CCRYGG 3 cut(s) 146, 212, 822
BstENI CCTNNNNNAGG 1 cut(s) 949
BstF5I GGATG 2 cut(s) 549, 997
BstFNI CGCG 1 cut(s) 741
BstKTI GATC 5 cut(s) 26, 93, 883, 913, 1090
BstMAI GTCTC 1 cut(s) 225
BstMBI GATC 5 cut(s) 23, 90, 880, 910, 1087
BstMCI CGRYCG 1 cut(s) 253
BstMWI GCNNNNNNNGC 3 cut(s) 214, 413, 685
BstNI CCWGG 3 cut(s) 946, 1079, 1098
BstSCI CCNGG 3 cut(s) 944, 1077, 1096
BstSFI CTRYAG 3 cut(s) 411, 657, 1256
BstUI CGCG 1 cut(s) 741
BstV1I GCAGC 4 cut(s) 57, 348, 378, 425
BstV2I GAAGAC 1 cut(s) 555
BstX2I RGATCY 1 cut(s) 23
BstXI CCANNNNNNTGG 1 cut(s) 1230
BstYI RGATCY 1 cut(s) 23
BsuI GTATCC 1 cut(s) 521
BsuRI GGCC 1 cut(s) 158
BtgI CCRYGG 3 cut(s) 146, 212, 822
BtgZI GCGATG 4 cut(s) 165, 336, 707, 941
BtsCI GGATG 2 cut(s) 549, 997
BtsI GCAGTG 1 cut(s) 1044
BtsIMutI CAGTG 4 cut(s) 757, 876, 1044, 1253
BveI ACCTGC 1 cut(s) 584
Cac8I GCNNGC 3 cut(s) 359, 653, 657
CciI TCATGA 1 cut(s) 1105
Cfr13I GGNCC 2 cut(s) 60, 345
Csp6I GTAC 5 cut(s) 110, 613, 697, 827, 996
CviAII CATG 6 cut(s) 147, 823, 859, 1091, 1106, 1130
CviQI GTAC 5 cut(s) 110, 613, 697, 827, 996
DpnI GATC 5 cut(s) 25, 92, 882, 912, 1089
DpnII GATC 5 cut(s) 23, 90, 880, 910, 1087
Eam1104I CTCTTC 1 cut(s) 943
EarI CTCTTC 1 cut(s) 943
Eco130I CCWWGG 2 cut(s) 146, 822
Eco32I GATATC 1 cut(s) 1103
Eco47I GGWCC 2 cut(s) 60, 345
EcoNI CCTNNNNNAGG 1 cut(s) 949
EcoO109I RGGNCCY 1 cut(s) 345
EcoRI GAATTC 1 cut(s) 1111
EcoRII CCWGG 3 cut(s) 944, 1077, 1096
EcoRV GATATC 1 cut(s) 1103
EcoT14I CCWWGG 2 cut(s) 146, 822
EcoT22I ATGCAT 1 cut(s) 1135
ErhI CCWWGG 2 cut(s) 146, 822
Esp3I CGTCTC 1 cut(s) 225
FaeI CATG 6 cut(s) 150, 826, 862, 1094, 1109, 1133
FaqI GGGAC 1 cut(s) 46
FatI CATG 6 cut(s) 146, 822, 858, 1090, 1105, 1129
FauI CCCGC 1 cut(s) 412
FbaI TGATCA 1 cut(s) 1087
FblI GTMKAC 1 cut(s) 933
Fnu4HI GCNGC 6 cut(s) 46, 125, 362, 392, 414, 417
FokI GGATG 2 cut(s) 556, 1004
Fsp4HI GCNGC 6 cut(s) 46, 125, 362, 392, 414, 417
FspBI CTAG 3 cut(s) 203, 701, 1002
GluI GCNGC 6 cut(s) 46, 125, 362, 392, 414, 417
GsaI CCCAGC 1 cut(s) 812
GsuI CTGGAG 2 cut(s) 921, 1080
HaeIII GGCC 1 cut(s) 158
HapII CCGG 2 cut(s) 452, 989
Hin1II CATG 6 cut(s) 150, 826, 862, 1094, 1109, 1133
HincII GTYRAC 1 cut(s) 934
HindII GTYRAC 1 cut(s) 934
HindIII AAGCTT 1 cut(s) 677
HinfI GANTC 3 cut(s) 494, 935, 1019
HpaII CCGG 2 cut(s) 452, 989
HphI GGTGA 1 cut(s) 1065
Hpy166II GTNNAC 2 cut(s) 934, 1018
Hpy188I TCNGA 1 cut(s) 623
Hpy188III TCNNGA 7 cut(s) 230, 370, 452, 498, 989, 1002, 1106
Hpy8I GTNNAC 2 cut(s) 934, 1018
HpyAV CCTTC 2 cut(s) 230, 1005
HpyCH4III ACNGT 6 cut(s) 105, 315, 638, 696, 752, 1257
HpyCH4IV ACGT 2 cut(s) 521, 1240
HpyCH4V TGCA 9 cut(s) 270, 339, 413, 549, 579, 651, 659, 1037, 1133
HpyF10VI GCNNNNNNNGC 3 cut(s) 214, 413, 685
HpySE526I ACGT 2 cut(s) 521, 1240
Hsp92II CATG 6 cut(s) 150, 826, 862, 1094, 1109, 1133
Kpn2I TCCGGA 2 cut(s) 451, 988
KpnI GGTACC 2 cut(s) 700, 830
Ksp22I TGATCA 1 cut(s) 1087
Kzo9I GATC 5 cut(s) 23, 90, 880, 910, 1087
LmnI GCTCC 5 cut(s) 222, 424, 823, 902, 1099
Lsp1109I GCAGC 4 cut(s) 57, 348, 378, 425
LweI GCATC 3 cut(s) 416, 862, 1142
MaeI CTAG 3 cut(s) 203, 701, 1002
MaeII ACGT 2 cut(s) 521, 1240
MaeIII GTNAC 3 cut(s) 632, 706, 735
MalI GATC 5 cut(s) 25, 92, 882, 912, 1089
MbiI CCGCTC 1 cut(s) 127
MboI GATC 5 cut(s) 23, 90, 880, 910, 1087
MboII GAAGA 6 cut(s) 419, 503, 555, 755, 930, 1131
MfeI CAATTG 2 cut(s) 72, 86
MflI RGATCY 1 cut(s) 23
MhlI GDGCHC 2 cut(s) 690, 820
MluCI AATT 8 cut(s) 55, 72, 86, 501, 838, 1082, 1111, 1158
MlyI GAGTC 2 cut(s) 929, 1013
MmeI TCCRAC 3 cut(s) 51, 601, 777
MnlI CCTC 6 cut(s) 229, 358, 492, 521, 790, 1136
Mph1103I ATGCAT 1 cut(s) 1135
MroI TCCGGA 2 cut(s) 451, 988
MroXI GAANNNNTTC 1 cut(s) 954
MseI TTAA 6 cut(s) 153, 276, 836, 1067, 1157, 1214
MslI CAYNNNNRTG 1 cut(s) 1003
MspA1I CMGCKG 2 cut(s) 416, 812
MspCI CTTAAG 1 cut(s) 152
MspI CCGG 2 cut(s) 452, 989
MspR9I CCNGG 3 cut(s) 946, 1079, 1098
MunI CAATTG 2 cut(s) 72, 86
MvaI CCWGG 3 cut(s) 946, 1079, 1098
MvnI CGCG 1 cut(s) 741
MwoI GCNNNNNNNGC 3 cut(s) 214, 413, 685
NcoI CCATGG 2 cut(s) 146, 822
NdeII GATC 5 cut(s) 23, 90, 880, 910, 1087
NlaIII CATG 6 cut(s) 150, 826, 862, 1094, 1109, 1133
NlaIV GGNNCC 7 cut(s) 25, 62, 218, 346, 420, 698, 828
NsiI ATGCAT 1 cut(s) 1135
PagI TCATGA 1 cut(s) 1105
PcsI WCGNNNNNNNCGW 2 cut(s) 182, 240
PdmI GAANNNNTTC 1 cut(s) 954
PfeI GAWTC 1 cut(s) 494
Pfl23II CGTACG 1 cut(s) 109
PfoI TCCNGGA 1 cut(s) 1096
PkrI GCNGC 6 cut(s) 47, 126, 363, 393, 415, 418
PleI GAGTC 2 cut(s) 929, 1013
PpsI GAGTC 2 cut(s) 929, 1013
PpuMI RGGWCCY 1 cut(s) 345
PshBI ATTAAT 1 cut(s) 1067
PsiI TTATAA 1 cut(s) 972
Psp1406I AACGTT 1 cut(s) 1240
Psp5II RGGWCCY 1 cut(s) 345
Psp6I CCWGG 3 cut(s) 944, 1077, 1096
PspFI CCCAGC 1 cut(s) 808
PspGI CCWGG 3 cut(s) 944, 1077, 1096
PspLI CGTACG 1 cut(s) 109
PspN4I GGNNCC 7 cut(s) 25, 62, 218, 346, 420, 698, 828
PspPI GGNCC 2 cut(s) 60, 345
PspPPI RGGWCCY 1 cut(s) 345
PstI CTGCAG 2 cut(s) 415, 661
PsuI RGATCY 1 cut(s) 23
PvuII CAGCTG 1 cut(s) 812
RsaI GTAC 5 cut(s) 111, 614, 698, 828, 997
RsaNI GTAC 5 cut(s) 110, 613, 697, 827, 996
RseI CAYNNNNRTG 1 cut(s) 1003
SalI GTCGAC 1 cut(s) 932
SaqAI TTAA 6 cut(s) 153, 276, 836, 1067, 1157, 1214
SatI GCNGC 6 cut(s) 46, 125, 362, 392, 414, 417
Sau3AI GATC 5 cut(s) 23, 90, 880, 910, 1087
Sau96I GGNCC 2 cut(s) 60, 345
SchI GAGTC 2 cut(s) 929, 1013
ScrFI CCNGG 3 cut(s) 946, 1079, 1098
SduI GDGCHC 2 cut(s) 690, 820
SfaNI GCATC 3 cut(s) 416, 862, 1142
SfcI CTRYAG 3 cut(s) 411, 657, 1256
SinI GGWCC 2 cut(s) 60, 345
SmiMI CAYNNNNRTG 1 cut(s) 1003
SmlI CTYRAG 2 cut(s) 152, 512
SmoI CTYRAG 2 cut(s) 152, 512
Sse9I AATT 8 cut(s) 55, 72, 86, 501, 838, 1082, 1111, 1158
SsiI CCGC 5 cut(s) 125, 249, 405, 416, 422
SspMI CTAG 3 cut(s) 203, 701, 1002
StyD4I CCNGG 3 cut(s) 944, 1077, 1096
StyI CCWWGG 2 cut(s) 146, 822
TaaI ACNGT 6 cut(s) 105, 315, 638, 696, 752, 1257
TaiI ACGT 2 cut(s) 524, 1243
TaqI TCGA 6 cut(s) 129, 229, 933, 958, 978, 1236
TasI AATT 8 cut(s) 55, 72, 86, 501, 838, 1082, 1111, 1158
TatI WGTACW 1 cut(s) 612
TauI GCSGC 2 cut(s) 127, 419
TfiI GAWTC 1 cut(s) 494
Tru1I TTAA 6 cut(s) 153, 276, 836, 1067, 1157, 1214
Tru9I TTAA 6 cut(s) 153, 276, 836, 1067, 1157, 1214
TscAI CASTG 4 cut(s) 757, 883, 1044, 1260
TseI GCWGC 4 cut(s) 45, 361, 391, 413
TspDTI ATGAA 2 cut(s) 162, 314
TspGWI ACGGA 1 cut(s) 97
TspRI CASTG 4 cut(s) 757, 883, 1044, 1260
Vha464I CTTAAG 1 cut(s) 152
VpaK11BI GGWCC 2 cut(s) 60, 345
VspI ATTAAT 1 cut(s) 1067
XagI CCTNNNNNAGG 1 cut(s) 949
XapI RAATTY 3 cut(s) 501, 1082, 1111
XbaI TCTAGA 1 cut(s) 1001
XcmI CCANNNNNNNNNTGG 1 cut(s) 793
XmiI GTMKAC 1 cut(s) 933
XmnI GAANNNNTTC 1 cut(s) 954
XspI CTAG 3 cut(s) 203, 701, 1002
Zsp2I ATGCAT 1 cut(s) 1135
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.