Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0004225

Physical Location & Seq

Genomic Coordinates Forward (+)

58902654 .. 58907405

Gene Structure 4752 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG361800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGCCTTACCAATTCTTCCTTTGGCCTCTGATCACTGTTCTATCCGCCTTAATCCTCAGAATCTCTCTACAAATATTCACCGCCAGAAGCAACCGCCACCGCGCCGTCGCATTCTTCCACCCCTACACCAACGACGGCGGCGGCGGCGAGAGAATGCTCTGGTGCGCCGTCAAAGCCATCCAGGACGAAAACCCCAACCTTGACTGCGTCGTCTTCACCGGCGACCACGACTCCTCCCCTGACTCACTCACTTCCCGAGCCGTCGATCGCTTTGGAGTCAAACTACTTCACCCACCAAAGGTGGTGCTTCTGTACAAGCGGAAATGGATCGAGGAAGCCACCTACCCGAGATTGACTATGATCGGGCAGAGCCTGGGCTCTGTGTATCTATCATGGGAAGCATTGACCAAGTTCACTCCAGCTTACTATTTCGACACCAGTGGATACGCCTTTACTTACCCAATTGCGAGGCTATTTGGCTGCAGAGTCATCTGCTACACACATTACCCTACAATCAGCTTGGACATGCTCTCTCGGGTTCGCCAGCGGAGCTCCATGTACAACAATGATGACTTCATTGTTCGGAGCAATTGGTTATCGCACTGCAAGATTGTGTACTACAATGTGTTTAGCTGGATGTATGGGATTGTAGGCTCTTGTGCACATCTTGCCATGGTCAACTCTTCGTGGACTCAGTCCCATATACAGAAGCTGTGGAAGATTCCGCAGCGAACTAAGCGTGTCTACCCTCCTTGCGATACTTCTGGACTTCAGGTGCTTCCTTTGGAAAGATCAGCTGATCCTGCAAAAATCATATCTGTTGCTCAGTTTCGGCCAGAGAAGGCACATGGTCTCCAACTTGAAGCCTTTGCAGTTGCAATAGGGAAATTAGATGCACACTTGCCCAGACCTAAGCTGCAGTTTGTGGGTAGTTGTCGGAATAAATCAGATGAGGAAAGATTAGAACATCTGAAAAATAAAGCAATTGAGCTGAAGGTGGACGGGGACGTGGAATTTCATAAAAATGTCATGTACAGTGTCAAACGCTTTAATGCAGGGCCATACAGCATTGCATTTTGTACAACAGATGCAGATGGTAAGTGGACAAAGCTGGATGAGCGTGAATGGTACTTAAATAATTGTTGCCATCATGATCAACTCTATGCATTACGGCAAGACATCAGTACGGTTGAAGTATGGGATTTCTCGACTTCCTTTCCCATTAAAAAGATGGAAACCCAAGCGGATCATGCGCTTGGGGAACGAATAAACTATCATCAAACATGGCGGCAACCATGCTACATAGCCAAAACAGCAGAAGATCTACTCCTCATATCGAGTTTATTCAGAAAAATCTGTGTTTTTAAGCTGGATTACAATTCCGATGGTAGCTACAGATGGATAGAGACAGAATCCATTGGCAAGGGTGAATTGTATTTGAATAGGGACCAGTCACTACTAACCTCAACAGCCGATGATGCTTCAGAATGCAATAGGAACTCAATTTACTTCACAGACTTGTTGAATTCCGGCAAAGGTGCCTTTGGTTTATTTGCGTATGGTTTAAGAAAGAAAAAAGAAGAAAAGGTCCAAGACTTGGTATTTTGGATGCCATATGGATCTATTTTGTTTGATCCTAATCTTTCATTCTTTCTTAGGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000026 GO:0000030 GO:0001101 GO:0003674 GO:0003824 GO:0004376 GO:0004377 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006464 GO:0006486 GO:0006487 GO:0006490 GO:0006629 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009832 GO:0009987 GO:0010033 GO:0012505 GO:0016020 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0031984 GO:0033577 GO:0033993 GO:0034645 GO:0036211 GO:0042175 GO:0042221 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0070085 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0097305 GO:0097502 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00510 ko00513 ko01100 map00510 map00513 map01100

Pfam Domains

Protein Families

ALG11_N Glycos_transf_1

Protein Analysis

554

Amino Acids

63.91

Weight (kDa)

8.66

Isoelectric Point (pI)

41.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALG11_N	PF15924	34 - 239	9.3e-87	ALG11 mannosyltransferase N-terminus
Beta-prop_KIB1-4	PF03478	355 - 512	1e-16	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004225)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g15921 FvH4_4g04632 FvH4_4g05202 FvH4_4g05500 FvH4_7g24700
prunus_persica	Prupe.1G052900_v2.0.a1 Prupe.1G053000_v2.0.a1
rosa_laevigata	RLG00000032962
rosa_multiflora	Rmu_sc0002021.1_g000018 Rmu_sc0004598.1_g000005 Rmu_sc0010817.1_g000006 Rmu_sc0021895.1_g000002 Rmu_sc0021895.1_g000003
rosa_roxburghii	Rroxscaffold_1G00052700 Rroxscaffold_4G00286440
rosa_rugosa	Rorug03G0352300 Rorug03G0357300
rosa_samantha	Rh1AG366800 Rh1BG330300 Rh1CG343200 Rh1CG344600 Rh1DG361800 Rh4AG059700 Rh4BG058300 Rh4CG064000 Rh4DG054900 Rh4DG061400 Rh4DG061600 Rh5BG185200 Rh5CG205200
rosa_wichuraiana	Rw1G032280 Rw4G004780 Rw5G017140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	209
AccB1I	GGYRCC	1 cut(s)	1538
AccB7I	CCANNNNNTGG	1 cut(s)	1597
AccI	GTMKAC	1 cut(s)	744
AccII	CGCG	1 cut(s)	102
AclWI	GGATC	5 cut(s)	335, 794, 1254, 1627, 1628
AcoI	YGGCCR	1 cut(s)	833
AcsI	RAATTY	2 cut(s)	1013, 1525
AcuI	CTGAAG	3 cut(s)	755, 1013, 1467
AfaI	GTAC	7 cut(s)	314, 560, 617, 1034, 1081, 1130, 1186
AfiI	CCNNNNNNNGG	2 cut(s)	298, 1597
AgsI	TTSAA	4 cut(s)	863, 1193, 1441, 1525
AjiI	CACGTC	1 cut(s)	1009
AjnI	CCWGG	2 cut(s)	180, 372
Alw21I	GWGCWC	2 cut(s)	554, 664
Alw26I	GTCTC	2 cut(s)	857, 1400
Alw44I	GTGCAC	1 cut(s)	660
AlwI	GGATC	5 cut(s)	335, 794, 1254, 1627, 1628
AlwNI	CAGNNNCTG	2 cut(s)	373, 712
Ama87I	CYCGRG	3 cut(s)	255, 346, 534
AoxI	GGCC	3 cut(s)	23, 833, 1058
ApaLI	GTGCAC	1 cut(s)	660
ApeKI	GCWGC	3 cut(s)	480, 727, 916
ApoI	RAATTY	2 cut(s)	1013, 1525
AspLEI	GCGC	3 cut(s)	104, 167, 1255
AspS9I	GGNCC	3 cut(s)	1058, 1447, 1588
AsuHPI	GGTGA	4 cut(s)	70, 208, 281, 1439
AvaI	CYCGRG	3 cut(s)	255, 346, 534
AvaII	GGWCC	2 cut(s)	1447, 1588
BaeGI	GKGCMC	1 cut(s)	664
BanI	GGYRCC	1 cut(s)	1538
BanII	GRGCYC	2 cut(s)	380, 554
BbsI	GAAGAC	1 cut(s)	205
Bbv12I	GWGCWC	2 cut(s)	554, 664
BbvI	GCAGC	3 cut(s)	467, 739, 903
BccI	CCATC	6 cut(s)	185, 1088, 1155, 1225, 1379, 1392
BceAI	ACGGC	5 cut(s)	89, 151, 152, 245, 1187
BciT130I	CCWGG	2 cut(s)	182, 374
BciVI	GTATCC	1 cut(s)	437
BclI	TGATCA	2 cut(s)	30, 1153
BcoDI	GTCTC	2 cut(s)	857, 1400
BfmI	CTRYAG	3 cut(s)	481, 917, 1393
BfuI	GTATCC	1 cut(s)	437
BglII	AGATCT	1 cut(s)	1321
BisI	GCNGC	7 cut(s)	139, 142, 145, 481, 728, 917, 1289
BlsI	GCNGC	7 cut(s)	140, 143, 146, 482, 729, 918, 1290
Bme1390I	CCNGG	2 cut(s)	182, 374
Bme18I	GGWCC	2 cut(s)	1447, 1588
BmeT110I	CYCGRG	3 cut(s)	255, 346, 534
BmgBI	CACGTC	1 cut(s)	1009
BmgT120I	GGNCC	3 cut(s)	1058, 1447, 1588
BmiI	GGNNCC	2 cut(s)	1448, 1540
BmrFI	CCNGG	2 cut(s)	182, 374
BmsI	GCATC	4 cut(s)	883, 1078, 1468, 1599
BpiI	GAAGAC	1 cut(s)	205
BpmI	CTGGAG	1 cut(s)	402
Bpu10I	CCTNAGC	1 cut(s)	912
BsaBI	GATNNNNATC	1 cut(s)	1638
BsaI	GGTCTC	1 cut(s)	857
BsaJI	CCNNGG	2 cut(s)	373, 672
BsaXI	ACNNNNNCTCC	6 cut(s)	215, 218, 245, 248, 837, 867
Bsc4I	CCNNNNNNNGG	2 cut(s)	298, 1597
Bse118I	RCCGGY	1 cut(s)	218
Bse1I	ACTGG	2 cut(s)	438, 1450
Bse3DI	GCAATG	1 cut(s)	1068
Bse8I	GATNNNNATC	1 cut(s)	1638
BseBI	CCWGG	2 cut(s)	182, 374
BseDI	CCNNGG	2 cut(s)	373, 672
BseGI	GGATG	4 cut(s)	177, 642, 1120, 1614
BseJI	GATNNNNATC	1 cut(s)	1638
BseLI	CCNNNNNNNGG	2 cut(s)	298, 1597
BseMI	GCAATG	1 cut(s)	1068
BseMII	CTCAG	3 cut(s)	70, 707, 839
BseNI	ACTGG	2 cut(s)	438, 1450
BseRI	GAGGAG	2 cut(s)	223, 1319
BseSI	GKGCMC	1 cut(s)	664
BseXI	GCAGC	3 cut(s)	467, 739, 903
Bsh1236I	CGCG	1 cut(s)	102
Bsh1285I	CGRYCG	1 cut(s)	268
BshFI	GGCC	3 cut(s)	25, 835, 1060
BshNI	GGYRCC	1 cut(s)	1538
BsiEI	CGRYCG	1 cut(s)	268
BsiHKAI	GWGCWC	2 cut(s)	554, 664
BsiHKCI	CYCGRG	3 cut(s)	255, 346, 534
BsiSI	CCGG	2 cut(s)	219, 1530
BslFI	GGGAC	3 cut(s)	682, 1019, 1460
BslI	CCNNNNNNNGG	2 cut(s)	298, 1597
BsmAI	GTCTC	2 cut(s)	857, 1400
BsmFI	GGGAC	3 cut(s)	682, 1019, 1460
BsmI	GAATGC	3 cut(s)	110, 159, 1493
BsnI	GGCC	3 cut(s)	25, 835, 1060
Bso31I	GGTCTC	1 cut(s)	857
BsoBI	CYCGRG	3 cut(s)	255, 346, 534
Bsp1286I	GDGCHC	3 cut(s)	380, 554, 664
Bsp1407I	TGTACA	4 cut(s)	312, 558, 1032, 1079
Bsp19I	CCATGG	1 cut(s)	672
BspANI	GGCC	3 cut(s)	25, 835, 1060
BspCNI	CTCAG	3 cut(s)	69, 706, 838
BspFNI	CGCG	1 cut(s)	102
BspHI	TCATGA	1 cut(s)	1150
BspLI	GGNNCC	2 cut(s)	1448, 1540
BspMAI	CTGCAG	2 cut(s)	485, 921
BspPI	GGATC	5 cut(s)	335, 794, 1254, 1627, 1628
BspT107I	GGYRCC	1 cut(s)	1538
BspTNI	GGTCTC	1 cut(s)	857
BsrDI	GCAATG	1 cut(s)	1068
BsrFI	RCCGGY	1 cut(s)	218
BsrGI	TGTACA	4 cut(s)	312, 558, 1032, 1079
BsrI	ACTGG	2 cut(s)	438, 1450
BssAI	RCCGGY	1 cut(s)	218
BssECI	CCNNGG	2 cut(s)	373, 672
BssT1I	CCWWGG	1 cut(s)	672
Bst2UI	CCWGG	2 cut(s)	182, 374
Bst4CI	ACNGT	3 cut(s)	37, 1037, 1189
Bst6I	CTCTTC	1 cut(s)	688
BstAPI	GCANNNNNTGC	1 cut(s)	668
BstAUI	TGTACA	4 cut(s)	312, 558, 1032, 1079
BstC8I	GCNNGC	1 cut(s)	545
BstDEI	CTNAG	6 cut(s)	56, 693, 735, 825, 912, 1655
BstDSI	CCRYGG	1 cut(s)	672
BstF5I	GGATG	4 cut(s)	177, 642, 1120, 1614
BstFNI	CGCG	1 cut(s)	102
BstHHI	GCGC	3 cut(s)	104, 167, 1255
BstMAI	GTCTC	2 cut(s)	857, 1400
BstMCI	CGRYCG	1 cut(s)	268
BstNI	CCWGG	2 cut(s)	182, 374
BstNSI	RCATGY	1 cut(s)	529
BstSCI	CCNGG	2 cut(s)	180, 372
BstSFI	CTRYAG	3 cut(s)	481, 917, 1393
BstSLI	GKGCMC	1 cut(s)	664
BstUI	CGCG	1 cut(s)	102
BstV1I	GCAGC	3 cut(s)	467, 739, 903
BstV2I	GAAGAC	1 cut(s)	205
BstX2I	RGATCY	2 cut(s)	1321, 1619
BstYI	RGATCY	2 cut(s)	1321, 1619
BsuI	GTATCC	1 cut(s)	437
BsuRI	GGCC	3 cut(s)	25, 835, 1060
BtgI	CCRYGG	1 cut(s)	672
BtrI	CACGTC	1 cut(s)	1009
BtsCI	GGATG	4 cut(s)	177, 642, 1120, 1614
BtsI	GCAGTG	1 cut(s)	601
BtsIMutI	CAGTG	4 cut(s)	33, 445, 601, 1042
Cac8I	GCNNGC	1 cut(s)	545
CaiI	CAGNNNCTG	2 cut(s)	373, 712
CciI	TCATGA	1 cut(s)	1150
CfoI	GCGC	3 cut(s)	104, 167, 1255
Cfr10I	RCCGGY	1 cut(s)	218
Cfr13I	GGNCC	3 cut(s)	1058, 1447, 1588
CseI	GACGC	1 cut(s)	196
Csp6I	GTAC	7 cut(s)	313, 559, 616, 1033, 1080, 1129, 1185
CviQI	GTAC	7 cut(s)	313, 559, 616, 1033, 1080, 1129, 1185
DdeI	CTNAG	6 cut(s)	56, 693, 735, 825, 912, 1655
DrdI	GACNNNNNNGTC	1 cut(s)	209
DseDI	GACNNNNNNGTC	1 cut(s)	209
EaeI	YGGCCR	1 cut(s)	833
Eam1104I	CTCTTC	1 cut(s)	688
EarI	CTCTTC	1 cut(s)	688
EciI	GGCGGA	1 cut(s)	34
Ecl136II	GAGCTC	1 cut(s)	552
Eco130I	CCWWGG	1 cut(s)	672
Eco24I	GRGCYC	2 cut(s)	380, 554
Eco31I	GGTCTC	1 cut(s)	857
Eco47I	GGWCC	2 cut(s)	1447, 1588
Eco53kI	GAGCTC	1 cut(s)	552
Eco57I	CTGAAG	3 cut(s)	755, 1013, 1467
Eco88I	CYCGRG	3 cut(s)	255, 346, 534
EcoICRI	GAGCTC	1 cut(s)	552
EcoRI	GAATTC	1 cut(s)	1525
EcoRII	CCWGG	2 cut(s)	180, 372
EcoT14I	CCWWGG	1 cut(s)	672
EcoT22I	ATGCAT	1 cut(s)	1168
EcoT38I	GRGCYC	2 cut(s)	380, 554
ErhI	CCWWGG	1 cut(s)	672
FaqI	GGGAC	3 cut(s)	682, 1019, 1460
FauNDI	CATATG	1 cut(s)	1615
FbaI	TGATCA	2 cut(s)	30, 1153
FblI	GTMKAC	1 cut(s)	744
Fnu4HI	GCNGC	7 cut(s)	139, 142, 145, 481, 728, 917, 1289
FokI	GGATG	4 cut(s)	164, 649, 1127, 1621
FriOI	GRGCYC	2 cut(s)	380, 554
Fsp4HI	GCNGC	7 cut(s)	139, 142, 145, 481, 728, 917, 1289
GlaI	GCGC	3 cut(s)	103, 166, 1254
GluI	GCNGC	7 cut(s)	139, 142, 145, 481, 728, 917, 1289
GsuI	CTGGAG	1 cut(s)	402
HaeIII	GGCC	3 cut(s)	25, 835, 1060
HapII	CCGG	2 cut(s)	219, 1530
HgaI	GACGC	1 cut(s)	196
HhaI	GCGC	3 cut(s)	104, 167, 1255
Hin6I	GCGC	3 cut(s)	102, 165, 1253
HinP1I	GCGC	3 cut(s)	102, 165, 1253
HincII	GTYRAC	1 cut(s)	679
HindII	GTYRAC	1 cut(s)	679
HinfI	GANTC	8 cut(s)	60, 230, 242, 276, 486, 691, 721, 1412
HpaII	CCGG	2 cut(s)	219, 1530
HphI	GGTGA	4 cut(s)	70, 208, 281, 1439
Hpy166II	GTNNAC	8 cut(s)	414, 616, 662, 679, 690, 745, 1000, 1104
Hpy188I	TCNGA	9 cut(s)	30, 59, 585, 939, 949, 972, 1349, 1384, 1486
Hpy188III	TCNNGA	4 cut(s)	255, 765, 1151, 1207
Hpy8I	GTNNAC	8 cut(s)	414, 616, 662, 679, 690, 745, 1000, 1104
Hpy99I	CGWCG	4 cut(s)	110, 137, 212, 266
HpyAV	CCTTC	2 cut(s)	835, 988
HpyCH4III	ACNGT	3 cut(s)	37, 1037, 1189
HpyCH4IV	ACGT	1 cut(s)	1008
HpyF3I	CTNAG	6 cut(s)	56, 693, 735, 825, 912, 1655
HpySE526I	ACGT	1 cut(s)	1008
HspAI	GCGC	3 cut(s)	102, 165, 1253
Ksp22I	TGATCA	2 cut(s)	30, 1153
LmnI	GCTCC	3 cut(s)	549, 557, 585
Lsp1109I	GCAGC	3 cut(s)	467, 739, 903
LweI	GCATC	4 cut(s)	883, 1078, 1468, 1599
MaeII	ACGT	1 cut(s)	1008
MaeIII	GTNAC	1 cut(s)	1452
MboII	GAAGA	7 cut(s)	7, 106, 205, 675, 730, 1331, 1592
MfeI	CAATTG	3 cut(s)	462, 589, 984
MflI	RGATCY	2 cut(s)	1321, 1619
MhlI	GDGCHC	3 cut(s)	380, 554, 664
MlyI	GAGTC	5 cut(s)	224, 236, 285, 495, 685
MmeI	TCCRAC	2 cut(s)	880, 917
MnlI	CCTC	9 cut(s)	36, 65, 244, 325, 462, 759, 946, 1340, 1474
Mph1103I	ATGCAT	1 cut(s)	1168
MseI	TTAA	6 cut(s)	50, 1050, 1133, 1224, 1365, 1565
MslI	CAYNNNNRTG	1 cut(s)	1023
MspA1I	CMGCKG	2 cut(s)	547, 797
MspI	CCGG	2 cut(s)	219, 1530
MspR9I	CCNGG	2 cut(s)	182, 374
MunI	CAATTG	3 cut(s)	462, 589, 984
Mva1269I	GAATGC	3 cut(s)	110, 159, 1493
MvaI	CCWGG	2 cut(s)	182, 374
MvnI	CGCG	1 cut(s)	102
NcoI	CCATGG	1 cut(s)	672
NdeI	CATATG	1 cut(s)	1615
NlaIV	GGNNCC	2 cut(s)	1448, 1540
NmuCI	GTSAC	1 cut(s)	1452
NsiI	ATGCAT	1 cut(s)	1168
NspI	RCATGY	1 cut(s)	529
PagI	TCATGA	1 cut(s)	1150
PctI	GAATGC	3 cut(s)	110, 159, 1493
PfeI	GAWTC	3 cut(s)	60, 721, 1412
PflFI	GACNNNGTC	2 cut(s)	206, 694
PflMI	CCANNNNNTGG	1 cut(s)	1597
PfoI	TCCNGGA	1 cut(s)	180
PkrI	GCNGC	7 cut(s)	140, 143, 146, 482, 729, 918, 1290
Ple19I	CGATCG	1 cut(s)	268
PleI	GAGTC	5 cut(s)	224, 236, 284, 494, 685
PpsI	GAGTC	5 cut(s)	224, 236, 284, 494, 685
Psp124BI	GAGCTC	1 cut(s)	554
Psp6I	CCWGG	2 cut(s)	180, 372
PspGI	CCWGG	2 cut(s)	180, 372
PspN4I	GGNNCC	2 cut(s)	1448, 1540
PspPI	GGNCC	3 cut(s)	1058, 1447, 1588
PsrI	GAACNNNNNNTAC	2 cut(s)	1490, 1522
PstI	CTGCAG	2 cut(s)	485, 921
PstNI	CAGNNNCTG	2 cut(s)	373, 712
PsuI	RGATCY	2 cut(s)	1321, 1619
PsyI	GACNNNGTC	2 cut(s)	206, 694
PvuI	CGATCG	1 cut(s)	268
PvuII	CAGCTG	1 cut(s)	797
RsaI	GTAC	7 cut(s)	314, 560, 617, 1034, 1081, 1130, 1186
RsaNI	GTAC	7 cut(s)	313, 559, 616, 1033, 1080, 1129, 1185
RseI	CAYNNNNRTG	1 cut(s)	1023
SacI	GAGCTC	1 cut(s)	554
SaqAI	TTAA	6 cut(s)	50, 1050, 1133, 1224, 1365, 1565
SatI	GCNGC	7 cut(s)	139, 142, 145, 481, 728, 917, 1289
Sau96I	GGNCC	3 cut(s)	1058, 1447, 1588
SchI	GAGTC	5 cut(s)	224, 236, 285, 495, 685
ScrFI	CCNGG	2 cut(s)	182, 374
SduI	GDGCHC	3 cut(s)	380, 554, 664
SfaNI	GCATC	4 cut(s)	883, 1078, 1468, 1599
SfcI	CTRYAG	3 cut(s)	481, 917, 1393
SgrAI	CRCCGGYG	1 cut(s)	218
SinI	GGWCC	2 cut(s)	1447, 1588
SmiMI	CAYNNNNRTG	1 cut(s)	1023
SspI	AATATT	1 cut(s)	75
SstI	GAGCTC	1 cut(s)	554
StyD4I	CCNGG	2 cut(s)	180, 372
StyI	CCWWGG	1 cut(s)	672
TaaI	ACNGT	3 cut(s)	37, 1037, 1189
TaiI	ACGT	1 cut(s)	1011
TaqI	TCGA	5 cut(s)	264, 330, 432, 1208, 1337
TatI	WGTACW	5 cut(s)	312, 558, 615, 1032, 1079
TauI	GCSGC	4 cut(s)	141, 144, 147, 1291
TfiI	GAWTC	3 cut(s)	60, 721, 1412
Tru1I	TTAA	6 cut(s)	50, 1050, 1133, 1224, 1365, 1565
Tru9I	TTAA	6 cut(s)	50, 1050, 1133, 1224, 1365, 1565
TscAI	CASTG	4 cut(s)	40, 445, 608, 1042
TseFI	GTSAC	1 cut(s)	1452
TseI	GCWGC	3 cut(s)	480, 727, 916
Tsp45I	GTSAC	1 cut(s)	1452
TspDTI	ATGAA	3 cut(s)	565, 1007, 1635
TspRI	CASTG	4 cut(s)	40, 445, 608, 1042
Tth111I	GACNNNGTC	2 cut(s)	206, 694
Van91I	CCANNNNNTGG	1 cut(s)	1597
VneI	GTGCAC	1 cut(s)	660
VpaK11BI	GGWCC	2 cut(s)	1447, 1588
XapI	RAATTY	2 cut(s)	1013, 1525
XceI	RCATGY	1 cut(s)	529
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1228
XmiI	GTMKAC	1 cut(s)	744
Zsp2I	ATGCAT	1 cut(s)	1168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.