chitin catabolic process
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G43580 AT2G43590 AT3G47540 AT3G47540 |
| fragaria_vesca | FvH4_2g31570 FvH4_4g10600 FvH4_4g10610 |
| malus_domestica | MD04G1047700.v1.1 MD04G1048300.v1.1 |
| prunus_persica | Prupe.1G080300_v2.0.a1 Prupe.1G080700_v2.0.a1 Prupe.1G080800_v2.0.a1 Prupe.1G205400_v2.0.a1 Prupe.1G205600_v2.0.a1 |
| pyrus_communis | pycom04g04170 pycom04g04260 |
| rosa_chinensis | RchiOBHm_Chr4g0406221 RchiOBHm_Chr4g0406231 RchiOBHm_Chr5g0013691 RchiOBHm_Chr6g0255151 |
| rosa_laevigata | RLG00000008787 RLG00000008788 RLG00000032041 |
| rosa_multiflora | Rmu_sc0002573.1_g000002 Rmu_sc0008653.1_g000006 Rmu_sc0008653.1_g000009 |
| rosa_roxburghii | Rroxscaffold_1G00062910 Rroxscaffold_5G00350940 Rroxscaffold_5G00350960 |
| rosa_rugosa | Rorug04G0065900 Rorug04G0066600 Rorug05G0012300 Rorug05G0012400 |
| rosa_samantha | Rh4AG136400 Rh4AG136500 Rh4BG133800 Rh4BG133900 Rh4CG144600 Rh4CG144700 Rh4DG131300 Rh5AG106700 Rh5BG102800 Rh5CG114700 Rh5DG101500 |
| rosa_wichuraiana | Rw4G011190 Rw4G011200 Rw5G009310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 143 |
| AciI | CCGC | 3 cut(s) | 141, 195, 201 |
| AclWI | GGATC | 1 cut(s) | 284 |
| AcsI | RAATTY | 1 cut(s) | 263 |
| AcuI | CTGAAG | 1 cut(s) | 279 |
| AfaI | GTAC | 1 cut(s) | 190 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 191 |
| AgsI | TTSAA | 1 cut(s) | 271 |
| AjnI | CCWGG | 3 cut(s) | 109, 165, 285 |
| AluBI | AGCT | 1 cut(s) | 62 |
| AluI | AGCT | 1 cut(s) | 62 |
| Alw21I | GWGCWC | 1 cut(s) | 70 |
| AlwI | GGATC | 1 cut(s) | 284 |
| ApeKI | GCWGC | 1 cut(s) | 162 |
| ApoI | RAATTY | 1 cut(s) | 263 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 314 |
| AspS9I | GGNCC | 1 cut(s) | 182 |
| AvaII | GGWCC | 1 cut(s) | 182 |
| BaeGI | GKGCMC | 1 cut(s) | 109 |
| BanI | GGYRCC | 1 cut(s) | 143 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 302 |
| Bbv12I | GWGCWC | 1 cut(s) | 70 |
| BbvI | GCAGC | 1 cut(s) | 174 |
| BciT130I | CCWGG | 3 cut(s) | 111, 167, 287 |
| BfmI | CTRYAG | 1 cut(s) | 160 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 132 |
| BisI | GCNGC | 3 cut(s) | 142, 163, 202 |
| BlsI | GCNGC | 3 cut(s) | 143, 164, 203 |
| Bme1390I | CCNGG | 3 cut(s) | 111, 167, 287 |
| Bme18I | GGWCC | 1 cut(s) | 182 |
| BmgT120I | GGNCC | 1 cut(s) | 182 |
| BmiI | GGNNCC | 1 cut(s) | 145 |
| BmrFI | CCNGG | 3 cut(s) | 111, 167, 287 |
| BpmI | CTGGAG | 2 cut(s) | 84, 243 |
| BsaJI | CCNNGG | 2 cut(s) | 109, 166 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 191 |
| Bse118I | RCCGGY | 1 cut(s) | 146 |
| Bse1I | ACTGG | 1 cut(s) | 196 |
| Bse3DI | GCAATG | 1 cut(s) | 42 |
| BseBI | CCWGG | 3 cut(s) | 111, 167, 287 |
| BseDI | CCNNGG | 2 cut(s) | 109, 166 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 191 |
| BseMI | GCAATG | 1 cut(s) | 42 |
| BseNI | ACTGG | 1 cut(s) | 196 |
| BseSI | GKGCMC | 1 cut(s) | 109 |
| BseXI | GCAGC | 1 cut(s) | 174 |
| BseYI | CCCAGC | 1 cut(s) | 305 |
| BshNI | GGYRCC | 1 cut(s) | 143 |
| BsiHKAI | GWGCWC | 1 cut(s) | 70 |
| BsiSI | CCGG | 1 cut(s) | 147 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 191 |
| Bsp1286I | GDGCHC | 2 cut(s) | 70, 109 |
| Bsp143I | GATC | 1 cut(s) | 276 |
| BspACI | CCGC | 3 cut(s) | 141, 195, 201 |
| BspLI | GGNNCC | 1 cut(s) | 145 |
| BspMAI | CTGCAG | 1 cut(s) | 164 |
| BspPI | GGATC | 1 cut(s) | 284 |
| BspT107I | GGYRCC | 1 cut(s) | 143 |
| BsrDI | GCAATG | 1 cut(s) | 42 |
| BsrFI | RCCGGY | 1 cut(s) | 146 |
| BsrI | ACTGG | 1 cut(s) | 196 |
| BssAI | RCCGGY | 1 cut(s) | 146 |
| BssECI | CCNNGG | 2 cut(s) | 109, 166 |
| BssMI | GATC | 1 cut(s) | 276 |
| Bst2UI | CCWGG | 3 cut(s) | 111, 167, 287 |
| Bst4CI | ACNGT | 1 cut(s) | 302 |
| BstKTI | GATC | 1 cut(s) | 279 |
| BstMBI | GATC | 1 cut(s) | 276 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 132, 141, 147, 201 |
| BstNI | CCWGG | 3 cut(s) | 111, 167, 287 |
| BstSCI | CCNGG | 3 cut(s) | 109, 165, 285 |
| BstSFI | CTRYAG | 1 cut(s) | 160 |
| BstSLI | GKGCMC | 1 cut(s) | 109 |
| BstV1I | GCAGC | 1 cut(s) | 174 |
| BtsI | GCAGTG | 1 cut(s) | 68 |
| BtsIMutI | CAGTG | 1 cut(s) | 68 |
| Cfr10I | RCCGGY | 1 cut(s) | 146 |
| Cfr13I | GGNCC | 1 cut(s) | 182 |
| CseI | GACGC | 1 cut(s) | 28 |
| Csp6I | GTAC | 1 cut(s) | 189 |
| CviJI | RGCY | 9 cut(s) | 5, 62, 102, 126, 135, 165, 245, 285, 290 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 62, 102, 126, 135, 165, 245, 285, 290 |
| CviQI | GTAC | 1 cut(s) | 189 |
| DpnI | GATC | 1 cut(s) | 278 |
| DpnII | GATC | 1 cut(s) | 276 |
| Eco47I | GGWCC | 1 cut(s) | 182 |
| Eco57I | CTGAAG | 1 cut(s) | 279 |
| EcoO109I | RGGNCCY | 1 cut(s) | 182 |
| EcoRI | GAATTC | 1 cut(s) | 263 |
| EcoRII | CCWGG | 3 cut(s) | 109, 165, 285 |
| FaiI | YATR | 4 cut(s) | 118, 132, 251, 281 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 274, 306 |
| Fnu4HI | GCNGC | 3 cut(s) | 142, 163, 202 |
| Fsp4HI | GCNGC | 3 cut(s) | 142, 163, 202 |
| GluI | GCNGC | 3 cut(s) | 142, 163, 202 |
| GsaI | CCCAGC | 1 cut(s) | 309 |
| GsuI | CTGGAG | 2 cut(s) | 84, 243 |
| HapII | CCGG | 1 cut(s) | 147 |
| HgaI | GACGC | 1 cut(s) | 28 |
| HincII | GTYRAC | 1 cut(s) | 176 |
| HindII | GTYRAC | 1 cut(s) | 176 |
| HpaII | CCGG | 1 cut(s) | 147 |
| Hpy166II | GTNNAC | 1 cut(s) | 176 |
| Hpy188I | TCNGA | 1 cut(s) | 298 |
| Hpy188III | TCNNGA | 1 cut(s) | 260 |
| Hpy8I | GTNNAC | 1 cut(s) | 176 |
| HpyCH4III | ACNGT | 1 cut(s) | 302 |
| HpyCH4V | TGCA | 2 cut(s) | 47, 162 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 132, 141, 147, 201 |
| Kzo9I | GATC | 1 cut(s) | 276 |
| LmnI | GCTCC | 1 cut(s) | 65 |
| Lsp1109I | GCAGC | 1 cut(s) | 174 |
| MaeIII | GTNAC | 2 cut(s) | 82, 253 |
| MalI | GATC | 1 cut(s) | 278 |
| MboI | GATC | 1 cut(s) | 276 |
| MboII | GAAGA | 3 cut(s) | 259, 285, 322 |
| MhlI | GDGCHC | 2 cut(s) | 70, 109 |
| MluCI | AATT | 2 cut(s) | 94, 263 |
| MroXI | GAANNNNTTC | 1 cut(s) | 314 |
| MspI | CCGG | 1 cut(s) | 147 |
| MspR9I | CCNGG | 3 cut(s) | 111, 167, 287 |
| MvaI | CCWGG | 3 cut(s) | 111, 167, 287 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 132, 141, 147, 201 |
| NdeII | GATC | 1 cut(s) | 276 |
| NlaIV | GGNNCC | 1 cut(s) | 145 |
| NmuCI | GTSAC | 1 cut(s) | 82 |
| PdmI | GAANNNNTTC | 1 cut(s) | 314 |
| PkrI | GCNGC | 3 cut(s) | 143, 164, 203 |
| PpuMI | RGGWCCY | 1 cut(s) | 182 |
| Psp5II | RGGWCCY | 1 cut(s) | 182 |
| Psp6I | CCWGG | 3 cut(s) | 109, 165, 285 |
| PspFI | CCCAGC | 1 cut(s) | 305 |
| PspGI | CCWGG | 3 cut(s) | 109, 165, 285 |
| PspN4I | GGNNCC | 1 cut(s) | 145 |
| PspPI | GGNCC | 1 cut(s) | 182 |
| PspPPI | RGGWCCY | 1 cut(s) | 182 |
| PstI | CTGCAG | 1 cut(s) | 164 |
| RsaI | GTAC | 1 cut(s) | 190 |
| RsaNI | GTAC | 1 cut(s) | 189 |
| SatI | GCNGC | 3 cut(s) | 142, 163, 202 |
| Sau3AI | GATC | 1 cut(s) | 276 |
| Sau96I | GGNCC | 1 cut(s) | 182 |
| ScrFI | CCNGG | 3 cut(s) | 111, 167, 287 |
| SduI | GDGCHC | 2 cut(s) | 70, 109 |
| SetI | ASST | 3 cut(s) | 30, 64, 184 |
| SfcI | CTRYAG | 1 cut(s) | 160 |
| SinI | GGWCC | 1 cut(s) | 182 |
| Sse9I | AATT | 2 cut(s) | 94, 263 |
| SsiI | CCGC | 3 cut(s) | 141, 195, 201 |
| StyD4I | CCNGG | 3 cut(s) | 109, 165, 285 |
| TaaI | ACNGT | 1 cut(s) | 302 |
| TasI | AATT | 2 cut(s) | 94, 263 |
| TatI | WGTACW | 1 cut(s) | 188 |
| TauI | GCSGC | 2 cut(s) | 144, 204 |
| TscAI | CASTG | 1 cut(s) | 75 |
| TseFI | GTSAC | 1 cut(s) | 82 |
| TseI | GCWGC | 1 cut(s) | 162 |
| Tsp45I | GTSAC | 1 cut(s) | 82 |
| TspRI | CASTG | 1 cut(s) | 75 |
| VpaK11BI | GGWCC | 1 cut(s) | 182 |
| XapI | RAATTY | 1 cut(s) | 263 |
| XmnI | GAANNNNTTC | 1 cut(s) | 314 |