Prupe.1G303700_v2.0.a1

nuclear matrix constituent protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001591
Physical Location & Seq
Reverse (-)
29772043 .. 29778216
6174 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G303700.2

Sequence Viewer

Length: 3597 bp
ATGATGTTCACGCCCCAGAGGAAGGCGTTAAATGCCCAATCACTGACGCCGAGGAGCGGCGCCGTCGTTTCGAACCCTAGGACCGCTGGGAAGGGTAAAGCGGTGGCGTTTGTGGACGGTCCGCCGCCGCCATTGGGTTCGCTGAGCGAAAGTGGACCCAAAACGATTCCGGATTTTGACACGGGCGATATGGACGATTGGAGGAGGTTTAAGGAGGTTGGATTGCTAAACGAGGCGGCTATGGAGCGCAAGGACCGCCAAGCGCTCGCCGACAAGGTCTCTAAGCTGCAAAAAGAGCTTTATGATTACCAGTATAACATGGGGCTTCTCCTGATTGAGAAGAAAGAGTGGGCTTTAAAGCATGAAGAATTGGGGGAAGCTTTGGCTGAAACTCAGGAGATTCTTAAAAGAGAACAGTCTGCACACTTAATTTCAATATCTGAAGTTGAGAAGCGGGAAGAGAATTTGAGGAAAGTATTGGTTGCTGAGAAGCAGTGTGTAGCCGAGCTGGAGAAAGCTTTGCGTGAAATGCATGAGGAGCACGCCCAAATAAAGCTCAAGTCTGAGGCAAAGTTGGCTGATGCAAATTCATTAGTTGTCGGAATTGAAGAAAAATCTTTGGAGACAGATGCAAAGTTTCTTGCTGCTGAAGCCAACATTGCTGAGGTCAACAGAAAGAGTACAGAGTTGGAGATGAGATTGCAAGAGGTGGAGGCACGTGAAAGTGTGCTTCGAAGGGAGCACCTTTCCTTAAGTGCAGAGAGAGAGGCACATAAGAAAACTTTTTACAAACAAAGGGAAGACTTGCAAGAATGGGAGAGGAAGCTACAAGAAGGGGAAGAGAGGCTATGCAAGCTTCGGAGAATTCTGAATGAGAAAGAGGAAAAAGCAAATGAAAATGATTTAATAATGAAGCAAAAGGAGAAAGAGCTTGATGAGGTGCAAAAGAAAATTGAACTTTCAAACACTATACTGAAAGAAAAGAAAGCTGATGTGAATAAACGGCTAGCTGACTTAGTATCAAAGGAAAAGGAAGCTGATTCTGTGGGAAAGATCTGGGAGTTGAAGGAGAAGGAATTACATGAATTGGAGGAAAAACTAAGTTCACGAGAAAATGCGGAGATTGAACAGGTGCTTGACAAGCAAAGGGCCCTTTGCAATACGAAAATGCAGGAGTTCGAGTTGGAAATGGAAGAAAGGAGGAAATCTCTTGACAAGGAACTGAGTGGCAAGGTAGAAGTGGTGGAACAGAAGGAATTGAAAATCAACCACAGGGAAGAGAAGTTGTTAAAGCAAGAGCAAGCATTGCATGAGAAATCAGAGAGGCTGAAGGAGAAAAATAAGGAACTTGAAACAAAGTCAAAAAATTTGAAGGAGAACGAGAAAACCATCAAAGTTAATGAGGAAATGTTAGAGGTGGAAAGGCAACAAGTACTTGCTGATTTAGAGAGTTTTCAGAATCTTAAAGAAGAAATTCAGAAGATAAAGGATGAAAATGTTCAACTGGAGCTTCAAATTCGTGAAGAGAGAGAGAAGCTGGTAATTACTCAGGAAGAGAGGTCAGAACACCTCCGTTTGCAGTCAGAACTGCAGCAGGAAATAAAGACATATAGACTTCAGAATGAGTTACTTTCGAAGGAAGCTGAAGATTTGAAGCAGCAGAGGGAAAAGTTTGAGGAAGAGTGGGAAAATTTGGATGAGAGAAAAGCTGAAATTAGCAGAGGGCTAGAGAAAATTGTTGAAGAGAAAGAAAAATTGGAAAAATTACAAGGCACAGAAGAAGAAAGGTTGAAAGAAGAGAAACATGCAATGCAAGATTACATAAAGAGGGAGCTAGACAATCTCAATCTAGAGAAAGAATCATTTGCGGCTAAGATGAGGAATGAGCAGTTTGCCATAGCTGAAAAGGCCCAATTTCAGCATAGTCAAATGGTGCAAGATTTTGAGTCTCAAAAAAGAGAACTTGAGGTTGATATGCAGAATAGGCAGCAGGAAATGGAGAAGCACCTACAGGAAATGGAGAGAGCATTTGAGGAGGAGAAGGATAGAGAATATACTAATATCAATTTTTTGAAGGAAGTTGCTGAAAAGAAAAGCGAAGAATTAAGATCTGAAAAGTATAGAATGGAAAAGGAAAGGGAAGAGCTTGCACTGAACAAGAAACAGGTGGAAGTAAACCAACTTGAAATGCGCAAAGACATTGATCAGCTTGCTATGCTTAGCAAGAAGATCAAGCACCAGAGGGAACAGCTTATTGAGGAAAGAGGTCGCTTCCTTGCTTTTGTTGAGAAGATTAAAAGTTGCAAGGACTGTGGAGAAATGACAAGGGAGTTTGTACTTTCTGATCTCCAAGTACCCGGAATGTACCACCATATTGAGGCTGTTTCTCTGCCGAGGCTCAGTGACGAATTTTTAAAGAACTCTCAGGCTGATTTATCTGCTCCTGATTTGGAATACCCAGAATCAGGATGGGGAACATCTTTGCTCCGCAAATGCAAGTCAATGGTTTCTAAAGTTTCTCCAATTAAAAAAATGGAGCATATTACTGATGCAGTGTCTACGGAATTGCCACCACTATCAACTATGAAGGTTAATGAGGGAGCAAGAGGGCATATCGGTCATGAAGATGAGCCTGAGCCATCTTTTAGGATGCCTAATGACGCAATTTCTCAACCGCTACCATCTGATAACACTACTAAAGAAGTGGATGATGGGTATGCTCCATCAATTGATGATCATAGCTTCATTGACAGTAAGGTGAAAGATGTTCCAGATGATTCTGAGCAATCAGAGCTAAAGAGTTATCAGTGTAAACCAGGTCGGGGACGCAAGTCCAGACTGTCAAGAACACGCACAGTGAAGGCAACGGTTGAAGAGGCCAAGATTTTTCTACGAGATACTCTGGAAGAACCATCAAATGCAAGTATGCTGCCAAATGATAGTAGTAACATTCATGAGGAAAGTCGGGGTGATTCCAGTTTTGTTGAGAAAGCAAATACTAGCATTGGAAGGAAACGAAGGCGTGCTCAGAGCTCTAGGATTACAGAAAGTGAGCAGGATGATTGTGATAGCGAAGGACGTTCTGGTAGTGTCACAACAGCTGGTGGGCGCAGGAAGAGGCGACAATCTATTGCTTCCTCTGTGCAAGCACCTGGAGAGCAGCGATATAATCTCAGACATCGCAAGACTGCAGGCTCAGTCACAGCAGCACCGGCTGCAGCTGACCTGAAAAAGAGAAGGAAGGAAGAAGCTGGAGGTGGTGGTGCAGAACCAAATCCGGAATCTGTTTCATCATTGGGGATGGCTGGTGAGACTGGGCAGACTGCACAGTTGATGCAGGTCACTACTTCAAAAAGTGTGGAATTCTCACAGGAGCGAGTAGTGAGGTTTAGCACACCAGAAGACATTGTTGATGGCAATGCTGCTGATGCAGCAAAAACAGTTGAAAATACTGAGTTGAGTGGGGAAGATAATGGAACACCAGAGTCTGGTAGTGGCAACAACACAGTTGGTGAGAGCGACGATGATTACGATGACGAGGAACGTCCTGGGGAGGCGTCAATAAGAAAGAAGATTTGGAATTTCCTTACAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1199

Amino Acids

137.91

Weight (kDa)

5.27

Isoelectric Point (pI)

51.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2192
Acc36I ACCTGC 1 cut(s) 3328
AccB1I GGYRCC 1 cut(s) 59
AccB7I CCANNNNNTGG 1 cut(s) 3488
AccBSI CCGCTC 1 cut(s) 57
AccI GTMKAC 1 cut(s) 2558
AccIII TCCGGA 2 cut(s) 169, 3277
AcuI CTGAAG 5 cut(s) 462, 669, 1349, 1601, 1665
AcvI CACGTG 1 cut(s) 719
AcyI GRCGYC 3 cut(s) 47, 60, 3557
AfaI GTAC 5 cut(s) 682, 1434, 2337, 2355, 2366
AfeI AGCGCT 1 cut(s) 264
AfiI CCNNNNNNNGG 7 cut(s) 22, 56, 134, 2377, 2465, 2822, 3488
AflII CTTAAG 1 cut(s) 751
AjnI CCWGG 3 cut(s) 2815, 3151, 3547
AjuI GAANNNNNNNTTGG 4 cut(s) 1739, 1771, 3559, 3591
Alw21I GWGCWC 4 cut(s) 543, 744, 3028, 3035
Alw26I GTCTC 4 cut(s) 283, 617, 1953, 3305
AlwNI CAGNNNCTG 1 cut(s) 3488
Aor13HI TCCGGA 2 cut(s) 169, 3277
Aor51HI AGCGCT 1 cut(s) 264
AoxI GGCC 3 cut(s) 1149, 1908, 2877
ApaI GGGCCC 1 cut(s) 1153
Asp700I GAANNNNTTC 2 cut(s) 1473, 1497
AspA2I CCTAGG 1 cut(s) 77
AspLEI GCGC 5 cut(s) 62, 249, 265, 2193, 3111
AspS9I GGNCC 7 cut(s) 81, 119, 155, 253, 1149, 1150, 1909
AsuC2I CCSGG 1 cut(s) 2358
AsuHPI GGTGA 4 cut(s) 2770, 2981, 3320, 3524
AsuII TTCGAA 3 cut(s) 71, 733, 1634
AsuNHI GCTAGC 1 cut(s) 1006
AvaII GGWCC 4 cut(s) 81, 119, 155, 253
AvrII CCTAGG 1 cut(s) 77
BaeGI GKGCMC 1 cut(s) 1153
BanI GGYRCC 1 cut(s) 59
BanII GRGCYC 2 cut(s) 1153, 3035
BauI CACGAG 1 cut(s) 1107
BbrPI CACGTG 1 cut(s) 719
BbsI GAAGAC 2 cut(s) 807, 3408
Bbv12I GWGCWC 4 cut(s) 543, 744, 3028, 3035
BbvCI CCTCAGC 1 cut(s) 663
BccI CCATC 9 cut(s) 1397, 2463, 2647, 2689, 2705, 2731, 2920, 3295, 3407
BceAI ACGGC 2 cut(s) 47, 1019
BciT130I CCWGG 3 cut(s) 2817, 3153, 3549
BclI TGATCA 2 cut(s) 2203, 2734
BcnI CCSGG 1 cut(s) 2358
BcoDI GTCTC 4 cut(s) 283, 617, 1953, 3305
BfaI CTAG 7 cut(s) 78, 1007, 1727, 1835, 1850, 3000, 3036
BfmI CTRYAG 4 cut(s) 1589, 2009, 3189, 3216
BfoI RGCGCY 2 cut(s) 63, 266
BfrI CTTAAG 1 cut(s) 751
BfuAI ACCTGC 1 cut(s) 3328
BglII AGATCT 2 cut(s) 1053, 2108
BlnI CCTAGG 1 cut(s) 77
BlpI GCTNAGC 2 cut(s) 143, 2219
BmcAI AGTACT 1 cut(s) 1434
Bme1390I CCNGG 4 cut(s) 2358, 2817, 3153, 3549
Bme18I GGWCC 4 cut(s) 81, 119, 155, 253
BmgT120I GGNCC 7 cut(s) 81, 119, 155, 253, 1149, 1150, 1909
BmiI GGNNCC 3 cut(s) 61, 157, 1151
BmrFI CCNGG 4 cut(s) 2358, 2817, 3153, 3549
BmrI ACTGGG 1 cut(s) 3324
BmsI GCATC 6 cut(s) 571, 619, 2539, 2640, 3324, 3418
BmtI GCTAGC 1 cut(s) 1010
BmuI ACTGGG 1 cut(s) 3324
BoxI GACNNNNGTC 1 cut(s) 2830
BpiI GAAGAC 2 cut(s) 807, 3408
BplI GAGNNNNNCTC 2 cut(s) 1192, 1224
BpmI CTGGAG 4 cut(s) 530, 1526, 3174, 3273
Bpu10I CCTNAGC 2 cut(s) 663, 2634
Bpu1102I GCTNAGC 2 cut(s) 143, 2219
Bpu14I TTCGAA 3 cut(s) 71, 733, 1634
BpuEI CTTGAG 2 cut(s) 542, 1985
BpuMI CCSGG 1 cut(s) 2358
BsaAI YACGTR 1 cut(s) 719
BsaHI GRCGYC 3 cut(s) 47, 60, 3557
BsaI GGTCTC 1 cut(s) 283
BsaJI CCNNGG 4 cut(s) 50, 77, 2393, 3548
BsaWI WCCGGW 2 cut(s) 169, 3277
BsaXI ACNNNNNCTCC 2 cut(s) 1166, 1196
Bsc4I CCNNNNNNNGG 7 cut(s) 22, 56, 134, 2377, 2465, 2822, 3488
Bse118I RCCGGY 1 cut(s) 3211
Bse1I ACTGG 4 cut(s) 310, 1509, 2976, 3319
Bse3DI GCAATG 4 cut(s) 657, 1304, 1815, 3424
BseAI TCCGGA 2 cut(s) 169, 3277
BseBI CCWGG 3 cut(s) 2817, 3153, 3549
BseDI CCNNGG 4 cut(s) 50, 77, 2393, 3548
BseGI GGATG 7 cut(s) 1495, 1702, 2474, 2655, 2713, 3064, 3306
BseLI CCNNNNNNNGG 7 cut(s) 22, 56, 134, 2377, 2465, 2822, 3488
BseMI GCAATG 4 cut(s) 657, 1304, 1815, 3424
BseNI ACTGG 4 cut(s) 310, 1509, 2976, 3319
BseRI GAGGAG 5 cut(s) 67, 217, 551, 2048, 2051
BseSI GKGCMC 1 cut(s) 1153
BseYI CCCAGC 1 cut(s) 86
BsgI GTGCAG 4 cut(s) 405, 777, 3285, 3309
BshFI GGCC 3 cut(s) 1151, 1910, 2879
BshNI GGYRCC 1 cut(s) 59
BsiHKAI GWGCWC 4 cut(s) 543, 744, 3028, 3035
BsiSI CCGG 4 cut(s) 170, 2358, 3212, 3278
BslFI GGGAC 1 cut(s) 2838
BslI CCNNNNNNNGG 7 cut(s) 22, 56, 134, 2377, 2465, 2822, 3488
BsmAI GTCTC 4 cut(s) 283, 617, 1953, 3305
BsmFI GGGAC 1 cut(s) 2838
BsnI GGCC 3 cut(s) 1151, 1910, 2879
Bso31I GGTCTC 1 cut(s) 283
Bsp119I TTCGAA 3 cut(s) 71, 733, 1634
Bsp120I GGGCCC 1 cut(s) 1149
Bsp1286I GDGCHC 5 cut(s) 543, 744, 1153, 3028, 3035
Bsp13I TCCGGA 2 cut(s) 169, 3277
Bsp143I GATC 6 cut(s) 1053, 2108, 2203, 2229, 2344, 2734
Bsp1720I GCTNAGC 2 cut(s) 143, 2219
BspANI GGCC 3 cut(s) 1151, 1910, 2879
BspEI TCCGGA 2 cut(s) 169, 3277
BspHI TCATGA 2 cut(s) 2620, 2953
BspLI GGNNCC 3 cut(s) 61, 157, 1151
BspMAI CTGCAG 3 cut(s) 1593, 3193, 3220
BspMI ACCTGC 1 cut(s) 3328
BspOI GCTAGC 1 cut(s) 1010
BspQI GCTCTTC 1 cut(s) 2136
BspT104I TTCGAA 3 cut(s) 71, 733, 1634
BspT107I GGYRCC 1 cut(s) 59
BspTI CTTAAG 1 cut(s) 751
BspTNI GGTCTC 1 cut(s) 283
BsrBI CCGCTC 1 cut(s) 57
BsrDI GCAATG 4 cut(s) 657, 1304, 1815, 3424
BsrFI RCCGGY 1 cut(s) 3211
BsrI ACTGG 4 cut(s) 310, 1509, 2976, 3319
BssAI RCCGGY 1 cut(s) 3211
BssECI CCNNGG 4 cut(s) 50, 77, 2393, 3548
BssMI GATC 6 cut(s) 1053, 2108, 2203, 2229, 2344, 2734
BssNI GRCGYC 3 cut(s) 47, 60, 3557
BssSI CACGAG 1 cut(s) 1107
BssT1I CCWWGG 1 cut(s) 77
Bst2BI CACGAG 1 cut(s) 1107
Bst2UI CCWGG 3 cut(s) 2817, 3153, 3549
BstACI GRCGYC 3 cut(s) 47, 60, 3557
BstAFI CTTAAG 1 cut(s) 751
BstAPI GCANNNNNTGC 2 cut(s) 1306, 3215
BstBAI YACGTR 1 cut(s) 719
BstBI TTCGAA 3 cut(s) 71, 733, 1634
BstF5I GGATG 7 cut(s) 1495, 1702, 2474, 2655, 2713, 3064, 3306
BstH2I RGCGCY 2 cut(s) 63, 266
BstHHI GCGC 5 cut(s) 62, 249, 265, 2193, 3111
BstKTI GATC 6 cut(s) 1056, 2111, 2206, 2232, 2347, 2737
BstMAI GTCTC 4 cut(s) 283, 617, 1953, 3305
BstMBI GATC 6 cut(s) 1053, 2108, 2203, 2229, 2344, 2734
BstNI CCWGG 3 cut(s) 2817, 3153, 3549
BstNSI RCATGY 1 cut(s) 1808
BstPAI GACNNNNGTC 1 cut(s) 2830
BstSCI CCNGG 4 cut(s) 2356, 2815, 3151, 3547
BstSFI CTRYAG 4 cut(s) 1589, 2009, 3189, 3216
BstSLI GKGCMC 1 cut(s) 1153
BstV2I GAAGAC 2 cut(s) 807, 3408
BstX2I RGATCY 2 cut(s) 1053, 2108
BstYI RGATCY 2 cut(s) 1053, 2108
BsuRI GGCC 3 cut(s) 1151, 1910, 2879
BtgZI GCGATG 1 cut(s) 3164
BtsCI GGATG 7 cut(s) 1495, 1702, 2474, 2655, 2713, 3064, 3306
BtsI GCAGTG 2 cut(s) 500, 2559
BtsIMutI CAGTG 7 cut(s) 41, 500, 2150, 2407, 2559, 2813, 2862
BveI ACCTGC 1 cut(s) 3328
CaiI CAGNNNCTG 1 cut(s) 3488
CciI TCATGA 2 cut(s) 2620, 2953
CfoI GCGC 5 cut(s) 62, 249, 265, 2193, 3111
Cfr10I RCCGGY 1 cut(s) 3211
Cfr13I GGNCC 7 cut(s) 81, 119, 155, 253, 1149, 1150, 1909
CpoI CGGWCCG 1 cut(s) 119
CseI GACGC 4 cut(s) 55, 2669, 2835, 3546
CsiI ACCWGGT 1 cut(s) 2815
Csp6I GTAC 5 cut(s) 681, 1433, 2336, 2354, 2365
CspCI CAANNNNNGTGG 4 cut(s) 2293, 2328, 3339, 3374
CspI CGGWCCG 1 cut(s) 119
CviAII CATG 9 cut(s) 319, 362, 533, 1082, 1310, 1805, 2621, 2954, 3594
CviQI GTAC 5 cut(s) 681, 1433, 2336, 2354, 2365
DinI GGCGCC 1 cut(s) 61
DpnI GATC 6 cut(s) 1055, 2110, 2205, 2231, 2346, 2736
DpnII GATC 6 cut(s) 1053, 2108, 2203, 2229, 2344, 2734
DraI TTTAAA 2 cut(s) 357, 2415
EciI GGCGGA 1 cut(s) 111
Ecl136II GAGCTC 1 cut(s) 3033
Eco130I CCWWGG 1 cut(s) 77
Eco24I GRGCYC 2 cut(s) 1153, 3035
Eco31I GGTCTC 1 cut(s) 283
Eco47I GGWCC 4 cut(s) 81, 119, 155, 253
Eco47III AGCGCT 1 cut(s) 264
Eco53kI GAGCTC 1 cut(s) 3033
Eco57I CTGAAG 5 cut(s) 462, 669, 1349, 1601, 1665
Eco72I CACGTG 1 cut(s) 719
EcoICRI GAGCTC 1 cut(s) 3033
EcoO109I RGGNCCY 2 cut(s) 1149, 1150
EcoRI GAATTC 2 cut(s) 864, 3362
EcoRII CCWGG 3 cut(s) 2815, 3151, 3547
EcoT14I CCWWGG 1 cut(s) 77
EcoT22I ATGCAT 1 cut(s) 534
EcoT38I GRGCYC 2 cut(s) 1153, 3035
EgeI GGCGCC 1 cut(s) 61
EheI GGCGCC 1 cut(s) 61
ErhI CCWWGG 1 cut(s) 77
FaeI CATG 9 cut(s) 322, 365, 536, 1085, 1313, 1808, 2624, 2957, 3597
FaqI GGGAC 1 cut(s) 2838
FatI CATG 9 cut(s) 318, 361, 532, 1081, 1309, 1804, 2620, 2953, 3593
FauI CCCGC 1 cut(s) 447
FbaI TGATCA 2 cut(s) 2203, 2734
FblI GTMKAC 1 cut(s) 2558
FokI GGATG 7 cut(s) 1502, 1709, 2481, 2662, 2720, 3071, 3313
FriOI GRGCYC 2 cut(s) 1153, 3035
FspBI CTAG 7 cut(s) 78, 1007, 1727, 1835, 1850, 3000, 3036
FspI TGCGCA 1 cut(s) 2192
GlaI GCGC 5 cut(s) 61, 248, 264, 2192, 3110
GsaI CCCAGC 1 cut(s) 90
GsuI CTGGAG 4 cut(s) 530, 1526, 3174, 3273
HaeII RGCGCY 2 cut(s) 63, 266
HaeIII GGCC 3 cut(s) 1151, 1910, 2879
HapII CCGG 4 cut(s) 170, 2358, 3212, 3278
HgaI GACGC 4 cut(s) 55, 2669, 2835, 3546
HhaI GCGC 5 cut(s) 62, 249, 265, 2193, 3111
Hin1I GRCGYC 3 cut(s) 47, 60, 3557
Hin1II CATG 9 cut(s) 322, 365, 536, 1085, 1313, 1808, 2624, 2957, 3597
Hin6I GCGC 5 cut(s) 60, 247, 263, 2191, 3109
HinP1I GCGC 5 cut(s) 60, 247, 263, 2191, 3109
HincII GTYRAC 1 cut(s) 670
HindII GTYRAC 1 cut(s) 670
HindIII AAGCTT 3 cut(s) 378, 516, 854
HpaII CCGG 4 cut(s) 170, 2358, 3212, 3278
HphI GGTGA 4 cut(s) 2770, 2981, 3320, 3524
Hpy166II GTNNAC 8 cut(s) 9, 115, 155, 670, 1106, 2176, 2559, 2813
Hpy8I GTNNAC 8 cut(s) 9, 115, 155, 670, 1106, 2176, 2559, 2813
Hpy99I CGWCG 2 cut(s) 68, 3524
HpyCH4IV ACGT 3 cut(s) 718, 3079, 3544
HpySE526I ACGT 3 cut(s) 718, 3079, 3544
Hsp92I GRCGYC 3 cut(s) 47, 60, 3557
Hsp92II CATG 9 cut(s) 322, 365, 536, 1085, 1313, 1808, 2624, 2957, 3597
HspAI GCGC 5 cut(s) 60, 247, 263, 2191, 3109
KasI GGCGCC 1 cut(s) 59
Kpn2I TCCGGA 2 cut(s) 169, 3277
Ksp22I TGATCA 2 cut(s) 2203, 2734
Kzo9I GATC 6 cut(s) 1053, 2108, 2203, 2229, 2344, 2734
LguI GCTCTTC 1 cut(s) 2136
LweI GCATC 6 cut(s) 571, 619, 2539, 2640, 3324, 3418
MabI ACCWGGT 1 cut(s) 2815
MaeI CTAG 7 cut(s) 78, 1007, 1727, 1835, 1850, 3000, 3036
MaeII ACGT 3 cut(s) 718, 3079, 3544
MaeIII GTNAC 6 cut(s) 1626, 2402, 2945, 3091, 3199, 3340
MalI GATC 6 cut(s) 1055, 2110, 2205, 2231, 2346, 2736
MbiI CCGCTC 1 cut(s) 57
MboI GATC 6 cut(s) 1053, 2108, 2203, 2229, 2344, 2734
MfeI CAATTG 1 cut(s) 2727
MflI RGATCY 2 cut(s) 1053, 2108
MhlI GDGCHC 5 cut(s) 543, 744, 1153, 3028, 3035
Mly113I GGCGCC 1 cut(s) 60
MlyI GAGTC 2 cut(s) 1955, 3494
MmeI TCCRAC 4 cut(s) 199, 580, 669, 1164
Mph1103I ATGCAT 1 cut(s) 534
MroI TCCGGA 2 cut(s) 169, 3277
MroXI GAANNNNTTC 2 cut(s) 1473, 1497
MslI CAYNNNNRTG 1 cut(s) 2625
MspA1I CMGCKG 3 cut(s) 86, 3101, 3221
MspCI CTTAAG 1 cut(s) 751
MspI CCGG 4 cut(s) 170, 2358, 3212, 3278
MspR9I CCNGG 4 cut(s) 2358, 2817, 3153, 3549
MunI CAATTG 1 cut(s) 2727
MvaI CCWGG 3 cut(s) 2817, 3153, 3549
NarI GGCGCC 1 cut(s) 60
NciI CCSGG 1 cut(s) 2358
NdeII GATC 6 cut(s) 1053, 2108, 2203, 2229, 2344, 2734
NheI GCTAGC 1 cut(s) 1006
NlaIII CATG 9 cut(s) 322, 365, 536, 1085, 1313, 1808, 2624, 2957, 3597
NlaIV GGNNCC 3 cut(s) 61, 157, 1151
NmeAIII GCCGAG 3 cut(s) 75, 529, 2418
NmuCI GTSAC 4 cut(s) 2402, 3091, 3199, 3340
NsbI TGCGCA 1 cut(s) 2192
NsiI ATGCAT 1 cut(s) 534
NspI RCATGY 1 cut(s) 1808
NspV TTCGAA 3 cut(s) 71, 733, 1634
PagI TCATGA 2 cut(s) 2620, 2953
PciSI GCTCTTC 1 cut(s) 2136
PcsI WCGNNNNNNNCGW 1 cut(s) 3528
PdmI GAANNNNTTC 2 cut(s) 1473, 1497
PfeI GAWTC 9 cut(s) 166, 400, 1040, 1459, 1859, 2462, 2777, 2972, 3281
PflFI GACNNNGTC 1 cut(s) 275
PflMI CCANNNNNTGG 1 cut(s) 3488
PleI GAGTC 2 cut(s) 1954, 3493
PluTI GGCGCC 1 cut(s) 63
PmaCI CACGTG 1 cut(s) 719
PmlI CACGTG 1 cut(s) 719
PpsI GAGTC 2 cut(s) 1954, 3493
Ppu21I YACGTR 1 cut(s) 719
PshAI GACNNNNGTC 1 cut(s) 2830
Psp124BI GAGCTC 1 cut(s) 3035
Psp6I CCWGG 3 cut(s) 2815, 3151, 3547
PspCI CACGTG 1 cut(s) 719
PspFI CCCAGC 1 cut(s) 86
PspGI CCWGG 3 cut(s) 2815, 3151, 3547
PspN4I GGNNCC 3 cut(s) 61, 157, 1151
PspOMI GGGCCC 1 cut(s) 1149
PspPI GGNCC 7 cut(s) 81, 119, 155, 253, 1149, 1150, 1909
PstI CTGCAG 3 cut(s) 1593, 3193, 3220
PstNI CAGNNNCTG 1 cut(s) 3488
PsuI RGATCY 2 cut(s) 1053, 2108
PsyI GACNNNGTC 1 cut(s) 275
PvuII CAGCTG 2 cut(s) 3101, 3221
RsaI GTAC 5 cut(s) 682, 1434, 2337, 2355, 2366
RsaNI GTAC 5 cut(s) 681, 1433, 2336, 2354, 2365
RseI CAYNNNNRTG 1 cut(s) 2625
Rsr2I CGGWCCG 1 cut(s) 119
RsrII CGGWCCG 1 cut(s) 119
SacI GAGCTC 1 cut(s) 3035
SapI GCTCTTC 1 cut(s) 2136
Sau3AI GATC 6 cut(s) 1053, 2108, 2203, 2229, 2344, 2734
Sau96I GGNCC 7 cut(s) 81, 119, 155, 253, 1149, 1150, 1909
ScaI AGTACT 1 cut(s) 1434
SchI GAGTC 2 cut(s) 1955, 3494
ScrFI CCNGG 4 cut(s) 2358, 2817, 3153, 3549
SduI GDGCHC 5 cut(s) 543, 744, 1153, 3028, 3035
SexAI ACCWGGT 1 cut(s) 2815
SfaNI GCATC 6 cut(s) 571, 619, 2539, 2640, 3324, 3418
SfcI CTRYAG 4 cut(s) 1589, 2009, 3189, 3216
SfoI GGCGCC 1 cut(s) 61
SfuI TTCGAA 3 cut(s) 71, 733, 1634
SinI GGWCC 4 cut(s) 81, 119, 155, 253
SmiMI CAYNNNNRTG 1 cut(s) 2625
SmlI CTYRAG 3 cut(s) 557, 751, 1964
SmoI CTYRAG 3 cut(s) 557, 751, 1964
SspDI GGCGCC 1 cut(s) 59
SspMI CTAG 7 cut(s) 78, 1007, 1727, 1835, 1850, 3000, 3036
SstI GAGCTC 1 cut(s) 3035
StyD4I CCNGG 4 cut(s) 2356, 2815, 3151, 3547
StyI CCWWGG 1 cut(s) 77
TaiI ACGT 3 cut(s) 721, 3082, 3547
TaqI TCGA 4 cut(s) 71, 733, 1179, 1634
TaqII GACCGA 1 cut(s) 2606
TatI WGTACW 3 cut(s) 680, 1432, 2335
TauI GCSGC 5 cut(s) 60, 127, 130, 239, 1871
TfiI GAWTC 9 cut(s) 166, 400, 1040, 1459, 1859, 2462, 2777, 2972, 3281
TscAI CASTG 7 cut(s) 48, 500, 2157, 2407, 2559, 2813, 2862
TseFI GTSAC 4 cut(s) 2402, 3091, 3199, 3340
Tsp45I GTSAC 4 cut(s) 2402, 3091, 3199, 3340
TspGWI ACGGA 2 cut(s) 1562, 2576
TspRI CASTG 7 cut(s) 48, 500, 2157, 2407, 2559, 2813, 2862
Tth111I GACNNNGTC 1 cut(s) 275
Van91I CCANNNNNTGG 1 cut(s) 3488
Vha464I CTTAAG 1 cut(s) 751
VpaK11BI GGWCC 4 cut(s) 81, 119, 155, 253
XbaI TCTAGA 1 cut(s) 1849
XceI RCATGY 1 cut(s) 1808
XcmI CCANNNNNNNNNTGG 1 cut(s) 2466
XmaJI CCTAGG 1 cut(s) 77
XmiI GTMKAC 1 cut(s) 2558
XmnI GAANNNNTTC 2 cut(s) 1473, 1497
XspI CTAG 7 cut(s) 78, 1007, 1727, 1835, 1850, 3000, 3036
ZrmI AGTACT 1 cut(s) 1434
Zsp2I ATGCAT 1 cut(s) 534
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.