Rw4G030240

nuclear matrix constituent protein 1-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
56936408 .. 56942141
5734 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G030240.1

Sequence Viewer

Length: 2841 bp
ATGTTCACGCCGCTGAGGAAGGCGCCGAGGACCACCTACAAGGGCAAAGCCGTGGCGTACGTCGACGGTCCTCCGCCGCCACTGGGCTCGCTGAGCGAAATCAGAAGCGGCAGCGGCGGGGCCAAAAACGTCGCCGGATTTGGACAATGCCGATTGGAGGCGCATGAGGAGTTGAGCCAAGCATTGGTTTTGGCTGAAACCCAAGAGATTCTACACAGGGAGCAGAGGGCTCATCTGATCGCAATTTCGGAAGTCAAAAGGCGAGAGGAGAATTTGAGGAACATATTGGTGGAGGAAAAGAGGTCTGCAGCTGAGCTCGAAAAGTCATTGCGTGAAATGCACGAGGAGTATACCCGGATAAAGCATGCATCTGAGGCGAAGGTGGCTATACAAATGCTGACAGATGAGAAGTTTCTTGCTGCTGAAGCCAAGCTTGCTGAGGCCAACAAAAAGAGTCTGGAGGTGGAGAGGAGGTTGCAAGAGGTGGAGACACATGAGTGTGCGCTTCGGAGGGAGCAAGCGTCGTTAAGTACAGAGAGAGAGGCACACAAGACAACTTTTTACAGACAGAGAAGACTTGAACGAGTGGAAAAGAAGTTAAAAGAAGGGGAAGAGAGGCTAAGCAATCTTCGTAAAATTTTGAACGAGAAAGAGGAAAAAACAAATGAAAACGAGATGATTCTTAAGCAAAAAGAGAGAGACCTTTATGAGGCTGAAAGGAAGATTGAGTCTTCAAACTCTCTGTTGAAAGAGAAGGAAGATGATGTGAATAAACGCCTAGCAGACCTAGTCTCAAAGGAAAAGGAGGTTCATTCAGCTTCATACATCTTAGAGATGAAGGAGAGAGAATTACATGCATTGGAGGAAAAACTAAATTCAAGAGAAATTCTGACACTGTTGCTTATCTATGGTTTTTTACAGGTGGAGATTAAAGAGCACCTTGGCCAGCACAGGGCCATTCTTGATAGAAAAATGCAGGCTTTTGAGTTGGGAATTGAGGAAAGGAGGAAATCTTTTGAGAAGGAACAGAGTAGCAAGATAGAAGCGGTGGAACAAAAGGAACTTGAAATCAGTCATAAGGAAGAAATGTTGAAGAAGCAAGAGAAAGCGTTGGATGAGAAATCAGAGAGGCTGAAGGAGAAAAATAAGGAAGTTGAAACAAATTTGAAAAATTTGAAGGAGAAAGAGAAGACCTTCAAAGCTGATGAGAAAAAGTTAGAGCTGGAAAGGCAGCAAATACTTACTGATATAGAGCACCTTCAGAATCTTAAAGATGAAATTCAGGAAATAAAAGACGAAAATGCTCAACTGGAGCAGCAAATTCGTGAAGGGAGAGAGAAGCAGGGAATTACCGAGCAAGAGAGGTCGGACCACCTATGTTTGCAGTCAGAACTGCAGCAGGAAATAAACAATTATAGACTTCAGAATGAGTTACTTTTGAAGCAAGCTGAAGATCTGAAGCAGGAGAGGGAAAAGTTCAAAAAAGACTGGGAAGATTTGGATGAGAAAAGAGCTAAAGTTGATGCAGAGCTTAGAAAAGTTGTTGAAGAGAAAGAAAAATTGGAAAGATTACAATGTATTGAAGCAGAGAGGTTGAAAGTACAGAGACAAGCAGTGCTGGATTACAGACAGAGGGAGATGGAAAATCTCAAGCATAATGAGCAGATAGCCTTATCTGAAAGGGCCCTATCTGAGCATGCTCAAATGGTCCATGATTTTGAGTCACGGAGAAGAGATCTTGAGATTGATATGAAAGGGAAGCGCTTGCACTGCAGCAGAAGGAGCTGGAAGCGAACCAACTTGAAACAGGTCGCTTTCTTGCCTTTGTACCATGCTGAGGCTGTTCCTGATTCTGAACATAAAGAGTCAGGATGGGGGAAAAACTGCAACAGAAATGCAAGAAAGGAATCCAACTTTCTTGCTGATGAGGAAGCAAGAGGTCCTAGCAGTCATGAAGAGCCTCAGCCATCTCTTAGGAGATGTAATGACTCGGCCAATGCTCAAGCTGTCGTAACTGATAACAACTCTAAGGAGGCGGATGATGGGTATGCTCCATCAATTGACAATCACAGTTTCATTGACAGCCATGAGCAAGACATTCCAGAAGATTCTGAGCAGTCAGAGCTGAAAAGTGGCCAACGAAAACCAGCTAGGGGACGCAAATCTAGATTGTCTAGAACACACTCAGTGAAGGCAGTTGTTGAAGACGCAAAGAAATTTTTAGGAGAAACTCCAGAAGCATCAACTGCAAGTTTGCTCAATGAGAGTAGTTACATAAATGAAGGTGATTCCAGTTTTACGAGCATCAGTCGGAAACGAGCCTGCCCTGAGAGCTCCAGGATAGAAAGCGAGCAAGATGATTGTGATAGCGAAGGACGTTCTGGTAGTGTCACAGCTGGTGGGCATAGGAAGAGGCGCCAACCCGTTGCTTCAGCAGTGCAAACCCCTGGAGAACATGCAGGCACATTGGCAGCAGCATCAGCAGCGCCTCACCTGAAAAGTAGAAGGAAGGAAGAATCAAATCCTGAATCTGTTGGTGTAGACCTGATTCAGGTCACAACGTTAAAAACTGTGGAGTCAACAGAGGAACGAGTTGTGAGGTTTGCAACACCAGAACCACAAGACACTGTTAATGGCAATGCTGATGCTGATGAAATGAAGTTGGTTGAAGAGAGAGAGTTGAGTACGGAAGTGAATGGCACAGAATCTAGTGGTGGCAACAGCACAGGCGGGGAGAGTGACAACAGCACAGGTGATGAGAGCGGCGATGACTATGATGATGAGGATCATCCTGGTCAAGCGTCAATAGGGAAGAAGATCTGGACCTTCTTCAGCACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

946

Amino Acids

108.53

Weight (kDa)

5.59

Isoelectric Point (pI)

58.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 22, 2415
AccB7I CCANNNNNTGG 1 cut(s) 184
AccBSI CCGCTC 1 cut(s) 2763
AccI GTMKAC 3 cut(s) 63, 350, 2541
AclI AACGTT 1 cut(s) 2561
AclWI GGATC 1 cut(s) 2793
AcoI YGGCCR 3 cut(s) 943, 1992, 2134
AcsI RAATTY 9 cut(s) 271, 636, 874, 885, 1162, 1171, 1278, 1320, 2216
AcuI CTGAAG 8 cut(s) 444, 1154, 1244, 1406, 1470, 1478, 2415, 2815
AcyI GRCGYC 2 cut(s) 23, 2416
AdeI CACNNNGTG 1 cut(s) 2188
AfaI GTAC 5 cut(s) 59, 532, 1602, 1829, 2686
AfeI AGCGCT 1 cut(s) 1763
AfiI CCNNNNNNNGG 8 cut(s) 83, 157, 184, 709, 952, 1837, 2153, 2551
AflII CTTAAG 1 cut(s) 683
AjnI CCWGG 3 cut(s) 2336, 2446, 2791
AjuI GAANNNNNNNTTGG 2 cut(s) 1544, 1576
AleI CACNNNNGTG 1 cut(s) 496
Alw21I GWGCWC 4 cut(s) 318, 939, 1257, 2336
Alw26I GTCTC 4 cut(s) 482, 693, 796, 1600
AlwI GGATC 1 cut(s) 2793
Aor51HI AGCGCT 1 cut(s) 1763
AoxI GGCC 7 cut(s) 120, 441, 943, 954, 1683, 1992, 2134
ApaI GGGCCC 1 cut(s) 1687
ApoI RAATTY 9 cut(s) 271, 636, 874, 885, 1162, 1171, 1278, 1320, 2216
Asp700I GAANNNNTTC 1 cut(s) 1193
AspLEI GCGC 6 cut(s) 25, 163, 505, 1764, 2418, 2488
AsuC2I CCSGG 1 cut(s) 355
AsuHPI GGTGA 3 cut(s) 2297, 2483, 2765
AvaII GGWCC 6 cut(s) 30, 68, 1369, 1708, 1940, 2823
BaeGI GKGCMC 1 cut(s) 1687
BalI TGGCCA 2 cut(s) 945, 2136
BanI GGYRCC 2 cut(s) 22, 2415
BanII GRGCYC 5 cut(s) 89, 232, 318, 1687, 2336
BauI CACGAG 1 cut(s) 341
BbsI GAAGAC 4 cut(s) 580, 723, 1196, 2211
Bbv12I GWGCWC 4 cut(s) 318, 939, 1257, 2336
BbvCI CCTCAGC 4 cut(s) 14, 438, 1836, 1962
BccI CCATC 5 cut(s) 1633, 1866, 1975, 2036, 2062
BceAI ACGGC 1 cut(s) 35
BcgI CGANNNNNNTGC 2 cut(s) 1304, 1338
BciT130I CCWGG 3 cut(s) 2338, 2448, 2793
BcnI CCSGG 1 cut(s) 355
BcoDI GTCTC 4 cut(s) 482, 693, 796, 1600
BfaI CTAG 7 cut(s) 779, 788, 1944, 2151, 2166, 2175, 2709
BfmI CTRYAG 3 cut(s) 306, 1394, 1771
BfoI RGCGCY 4 cut(s) 26, 1765, 2419, 2489
BfrI CTTAAG 1 cut(s) 683
BglII AGATCT 3 cut(s) 1453, 1735, 2817
BlpI GCTNAGC 3 cut(s) 92, 312, 620
Bme1390I CCNGG 4 cut(s) 355, 2338, 2448, 2793
Bme18I GGWCC 6 cut(s) 30, 68, 1369, 1708, 1940, 2823
BmiI GGNNCC 4 cut(s) 24, 121, 1685, 2417
BmrFI CCNGG 4 cut(s) 355, 2338, 2448, 2793
BmrI ACTGGG 2 cut(s) 92, 1498
BmsI GCATC 6 cut(s) 377, 1513, 2249, 2313, 2486, 2635
BmuI ACTGGG 2 cut(s) 92, 1498
BpiI GAAGAC 4 cut(s) 580, 723, 1196, 2211
BpmI CTGGAG 5 cut(s) 479, 1331, 2217, 2320, 2469
Bpu10I CCTNAGC 4 cut(s) 14, 438, 1836, 1962
Bpu1102I GCTNAGC 3 cut(s) 92, 312, 620
BpuEI CTTGAG 3 cut(s) 1634, 1760, 1986
BpuMI CCSGG 1 cut(s) 355
BsaBI GATNNNNATC 1 cut(s) 2784
BsaHI GRCGYC 2 cut(s) 23, 2416
BsaI GGTCTC 1 cut(s) 693
BsaJI CCNNGG 4 cut(s) 26, 51, 940, 2446
BsaXI ACNNNNNCTCC 4 cut(s) 458, 488, 506, 536
Bsc4I CCNNNNNNNGG 8 cut(s) 83, 157, 184, 709, 952, 1837, 2153, 2551
Bse1I ACTGG 4 cut(s) 87, 1314, 1493, 2292
Bse3DI GCAATG 2 cut(s) 326, 2644
Bse8I GATNNNNATC 1 cut(s) 2784
BseBI CCWGG 3 cut(s) 2338, 2448, 2793
BseDI CCNNGG 4 cut(s) 26, 51, 940, 2446
BseGI GGATG 5 cut(s) 1120, 1507, 1877, 2044, 2788
BseJI GATNNNNATC 1 cut(s) 2784
BseLI CCNNNNNNNGG 8 cut(s) 83, 157, 184, 709, 952, 1837, 2153, 2551
BseMI GCAATG 2 cut(s) 326, 2644
BseNI ACTGG 4 cut(s) 87, 1314, 1493, 2292
BseRI GAGGAG 4 cut(s) 182, 281, 359, 484
BseSI GKGCMC 1 cut(s) 1687
BshFI GGCC 7 cut(s) 122, 443, 945, 956, 1685, 1994, 2136
BshNI GGYRCC 2 cut(s) 22, 2415
BsiHKAI GWGCWC 4 cut(s) 318, 939, 1257, 2336
BsiSI CCGG 2 cut(s) 135, 355
BsiWI CGTACG 1 cut(s) 57
BslFI GGGAC 1 cut(s) 2169
BslI CCNNNNNNNGG 8 cut(s) 83, 157, 184, 709, 952, 1837, 2153, 2551
BsmAI GTCTC 4 cut(s) 482, 693, 796, 1600
BsmFI GGGAC 1 cut(s) 2169
BsnI GGCC 7 cut(s) 122, 443, 945, 956, 1685, 1994, 2136
Bso31I GGTCTC 1 cut(s) 693
Bsp120I GGGCCC 1 cut(s) 1683
Bsp1286I GDGCHC 7 cut(s) 89, 232, 318, 939, 1257, 1687, 2336
Bsp143I GATC 5 cut(s) 237, 1453, 1735, 2785, 2817
Bsp1720I GCTNAGC 3 cut(s) 92, 312, 620
BspANI GGCC 7 cut(s) 122, 443, 945, 956, 1685, 1994, 2136
BspHI TCATGA 1 cut(s) 1951
BspLI GGNNCC 4 cut(s) 24, 121, 1685, 2417
BspMAI CTGCAG 3 cut(s) 310, 1398, 1775
BspPI GGATC 1 cut(s) 2793
BspQI GCTCTTC 1 cut(s) 1950
BspT107I GGYRCC 2 cut(s) 22, 2415
BspTI CTTAAG 1 cut(s) 683
BspTNI GGTCTC 1 cut(s) 693
BsrBI CCGCTC 1 cut(s) 2763
BsrDI GCAATG 2 cut(s) 326, 2644
BsrI ACTGG 4 cut(s) 87, 1314, 1493, 2292
BssECI CCNNGG 4 cut(s) 26, 51, 940, 2446
BssMI GATC 5 cut(s) 237, 1453, 1735, 2785, 2817
BssNAI GTATAC 1 cut(s) 351
BssNI GRCGYC 2 cut(s) 23, 2416
BssSI CACGAG 1 cut(s) 341
BssT1I CCWWGG 1 cut(s) 940
Bst1107I GTATAC 1 cut(s) 351
Bst2BI CACGAG 1 cut(s) 341
Bst2UI CCWGG 3 cut(s) 2338, 2448, 2793
Bst4CI ACNGT 5 cut(s) 68, 897, 2072, 2572, 2629
Bst6I CTCTTC 6 cut(s) 606, 1542, 1726, 1950, 2405, 2664
BstACI GRCGYC 2 cut(s) 23, 2416
BstAFI CTTAAG 1 cut(s) 683
BstAPI GCANNNNNTGC 1 cut(s) 2246
BstDSI CCRYGG 1 cut(s) 51
BstENI CCTNNNNNAGG 2 cut(s) 707, 2549
BstF5I GGATG 5 cut(s) 1120, 1507, 1877, 2044, 2788
BstH2I RGCGCY 4 cut(s) 26, 1765, 2419, 2489
BstHHI GCGC 6 cut(s) 25, 163, 505, 1764, 2418, 2488
BstKTI GATC 5 cut(s) 240, 1456, 1738, 2788, 2820
BstMAI GTCTC 4 cut(s) 482, 693, 796, 1600
BstMBI GATC 5 cut(s) 237, 1453, 1735, 2785, 2817
BstNI CCWGG 3 cut(s) 2338, 2448, 2793
BstNSI RCATGY 4 cut(s) 368, 857, 1700, 2459
BstSCI CCNGG 4 cut(s) 353, 2336, 2446, 2791
BstSFI CTRYAG 3 cut(s) 306, 1394, 1771
BstSLI GKGCMC 1 cut(s) 1687
BstV2I GAAGAC 4 cut(s) 580, 723, 1196, 2211
BstX2I RGATCY 3 cut(s) 1453, 1735, 2817
BstYI RGATCY 3 cut(s) 1453, 1735, 2817
BstZ17I GTATAC 1 cut(s) 351
BsuRI GGCC 7 cut(s) 122, 443, 945, 956, 1685, 1994, 2136
BtgI CCRYGG 1 cut(s) 51
BtgZI GCGATG 1 cut(s) 2781
BtsCI GGATG 5 cut(s) 1120, 1507, 1877, 2044, 2788
BtsI GCAGTG 3 cut(s) 1620, 1768, 2442
BtsIMutI CAGTG 7 cut(s) 80, 893, 1620, 1768, 2193, 2442, 2625
CciI TCATGA 1 cut(s) 1951
CfoI GCGC 6 cut(s) 25, 163, 505, 1764, 2418, 2488
CseI GACGC 4 cut(s) 510, 2166, 2216, 2790
Csp6I GTAC 5 cut(s) 58, 531, 1601, 1828, 2685
CviQI GTAC 5 cut(s) 58, 531, 1601, 1828, 2685
DinI GGCGCC 2 cut(s) 24, 2417
DpnI GATC 5 cut(s) 239, 1455, 1737, 2787, 2819
DpnII GATC 5 cut(s) 237, 1453, 1735, 2785, 2817
DraIII CACNNNGTG 1 cut(s) 2188
EaeI YGGCCR 3 cut(s) 943, 1992, 2134
Eam1104I CTCTTC 6 cut(s) 606, 1542, 1726, 1950, 2405, 2664
EarI CTCTTC 6 cut(s) 606, 1542, 1726, 1950, 2405, 2664
EciI GGCGGA 2 cut(s) 63, 2051
Ecl136II GAGCTC 2 cut(s) 316, 2334
Eco130I CCWWGG 1 cut(s) 940
Eco24I GRGCYC 5 cut(s) 89, 232, 318, 1687, 2336
Eco31I GGTCTC 1 cut(s) 693
Eco47I GGWCC 6 cut(s) 30, 68, 1369, 1708, 1940, 2823
Eco47III AGCGCT 1 cut(s) 1763
Eco53kI GAGCTC 2 cut(s) 316, 2334
Eco57I CTGAAG 8 cut(s) 444, 1154, 1244, 1406, 1470, 1478, 2415, 2815
EcoICRI GAGCTC 2 cut(s) 316, 2334
EcoNI CCTNNNNNAGG 2 cut(s) 707, 2549
EcoO109I RGGNCCY 3 cut(s) 1683, 1684, 1940
EcoRII CCWGG 3 cut(s) 2336, 2446, 2791
EcoT14I CCWWGG 1 cut(s) 940
EcoT22I ATGCAT 2 cut(s) 370, 859
EcoT38I GRGCYC 5 cut(s) 89, 232, 318, 1687, 2336
EgeI GGCGCC 2 cut(s) 24, 2417
EheI GGCGCC 2 cut(s) 24, 2417
ErhI CCWWGG 1 cut(s) 940
FalI AAGNNNNNCTT 4 cut(s) 417, 449, 924, 956
FaqI GGGAC 1 cut(s) 2169
FauI CCCGC 2 cut(s) 110, 2723
FblI GTMKAC 3 cut(s) 63, 350, 2541
FokI GGATG 5 cut(s) 1127, 1514, 1884, 2051, 2775
FriOI GRGCYC 5 cut(s) 89, 232, 318, 1687, 2336
FspBI CTAG 7 cut(s) 779, 788, 1944, 2151, 2166, 2175, 2709
GlaI GCGC 6 cut(s) 24, 162, 504, 1763, 2417, 2487
GsuI CTGGAG 5 cut(s) 479, 1331, 2217, 2320, 2469
HaeII RGCGCY 4 cut(s) 26, 1765, 2419, 2489
HaeIII GGCC 7 cut(s) 122, 443, 945, 956, 1685, 1994, 2136
HapII CCGG 2 cut(s) 135, 355
HgaI GACGC 4 cut(s) 510, 2166, 2216, 2790
HhaI GCGC 6 cut(s) 25, 163, 505, 1764, 2418, 2488
Hin1I GRCGYC 2 cut(s) 23, 2416
Hin6I GCGC 6 cut(s) 23, 161, 503, 1762, 2416, 2486
HinP1I GCGC 6 cut(s) 23, 161, 503, 1762, 2416, 2486
HincII GTYRAC 2 cut(s) 64, 2580
HindII GTYRAC 2 cut(s) 64, 2580
HindIII AAGCTT 1 cut(s) 431
HpaII CCGG 2 cut(s) 135, 355
HphI GGTGA 3 cut(s) 2297, 2483, 2765
Hpy166II GTNNAC 5 cut(s) 6, 64, 351, 2542, 2580
Hpy8I GTNNAC 5 cut(s) 6, 64, 351, 2542, 2580
Hpy99I CGWCG 4 cut(s) 65, 68, 134, 526
HpyCH4III ACNGT 5 cut(s) 68, 897, 2072, 2572, 2629
HpyCH4IV ACGT 4 cut(s) 60, 129, 2377, 2561
HpySE526I ACGT 4 cut(s) 60, 129, 2377, 2561
Hsp92I GRCGYC 2 cut(s) 23, 2416
HspAI GCGC 6 cut(s) 23, 161, 503, 1762, 2416, 2486
KasI GGCGCC 2 cut(s) 22, 2415
Kzo9I GATC 5 cut(s) 237, 1453, 1735, 2785, 2817
LguI GCTCTTC 1 cut(s) 1950
LmnI GCTCC 6 cut(s) 220, 514, 1312, 1782, 2056, 2339
LweI GCATC 6 cut(s) 377, 1513, 2249, 2313, 2486, 2635
MaeI CTAG 7 cut(s) 779, 788, 1944, 2151, 2166, 2175, 2709
MaeII ACGT 4 cut(s) 60, 129, 2377, 2561
MaeIII GTNAC 7 cut(s) 1431, 1722, 2011, 2270, 2389, 2554, 2738
MalI GATC 5 cut(s) 239, 1455, 1737, 2787, 2819
MbiI CCGCTC 1 cut(s) 2763
MboI GATC 5 cut(s) 237, 1453, 1735, 2785, 2817
MfeI CAATTG 1 cut(s) 2058
MflI RGATCY 3 cut(s) 1453, 1735, 2817
MhlI GDGCHC 7 cut(s) 89, 232, 318, 939, 1257, 1687, 2336
MlsI TGGCCA 2 cut(s) 945, 2136
MluNI TGGCCA 2 cut(s) 945, 2136
Mly113I GGCGCC 2 cut(s) 23, 2416
MlyI GAGTC 6 cut(s) 463, 737, 1730, 1874, 1982, 2585
MmeI TCCRAC 4 cut(s) 1092, 1347, 1935, 2291
Mox20I TGGCCA 2 cut(s) 945, 2136
Mph1103I ATGCAT 2 cut(s) 370, 859
MroXI GAANNNNTTC 1 cut(s) 1193
MscI TGGCCA 2 cut(s) 945, 2136
MseI TTAA 7 cut(s) 527, 599, 684, 930, 1269, 2564, 2631
MslI CAYNNNNRTG 3 cut(s) 287, 496, 498
Msp20I TGGCCA 2 cut(s) 945, 2136
MspA1I CMGCKG 4 cut(s) 13, 114, 311, 2396
MspCI CTTAAG 1 cut(s) 683
MspI CCGG 2 cut(s) 135, 355
MspR9I CCNGG 4 cut(s) 355, 2338, 2448, 2793
MunI CAATTG 1 cut(s) 2058
MvaI CCWGG 3 cut(s) 2338, 2448, 2793
NarI GGCGCC 2 cut(s) 23, 2416
NciI CCSGG 1 cut(s) 355
NdeII GATC 5 cut(s) 237, 1453, 1735, 2785, 2817
NlaIV GGNNCC 4 cut(s) 24, 121, 1685, 2417
NmeAIII GCCGAG 2 cut(s) 51, 1970
NmuCI GTSAC 4 cut(s) 1722, 2389, 2554, 2738
NsiI ATGCAT 2 cut(s) 370, 859
NspI RCATGY 4 cut(s) 368, 857, 1700, 2459
OliI CACNNNNGTG 1 cut(s) 496
PaeI GCATGC 2 cut(s) 368, 1700
PagI TCATGA 1 cut(s) 1951
PciSI GCTCTTC 1 cut(s) 1950
PdmI GAANNNNTTC 1 cut(s) 1193
Pfl23II CGTACG 1 cut(s) 57
PflFI GACNNNGTC 1 cut(s) 788
PflMI CCANNNNNTGG 1 cut(s) 184
PfoI TCCNGGA 1 cut(s) 2336
PleI GAGTC 6 cut(s) 462, 736, 1729, 1873, 1982, 2584
PluTI GGCGCC 2 cut(s) 26, 2419
PpsI GAGTC 6 cut(s) 462, 736, 1729, 1873, 1982, 2584
PpuMI RGGWCCY 1 cut(s) 1940
Psp124BI GAGCTC 2 cut(s) 318, 2336
Psp1406I AACGTT 1 cut(s) 2561
Psp5II RGGWCCY 1 cut(s) 1940
Psp6I CCWGG 3 cut(s) 2336, 2446, 2791
PspGI CCWGG 3 cut(s) 2336, 2446, 2791
PspLI CGTACG 1 cut(s) 57
PspN4I GGNNCC 4 cut(s) 24, 121, 1685, 2417
PspOMI GGGCCC 1 cut(s) 1683
PspPPI RGGWCCY 1 cut(s) 1940
PstI CTGCAG 3 cut(s) 310, 1398, 1775
PsuI RGATCY 3 cut(s) 1453, 1735, 2817
PsyI GACNNNGTC 1 cut(s) 788
PvuII CAGCTG 2 cut(s) 311, 2396
RsaI GTAC 5 cut(s) 59, 532, 1602, 1829, 2686
RsaNI GTAC 5 cut(s) 58, 531, 1601, 1828, 2685
RseI CAYNNNNRTG 3 cut(s) 287, 496, 498
SacI GAGCTC 2 cut(s) 318, 2336
SalI GTCGAC 1 cut(s) 62
SapI GCTCTTC 1 cut(s) 1950
SaqAI TTAA 7 cut(s) 527, 599, 684, 930, 1269, 2564, 2631
Sau3AI GATC 5 cut(s) 237, 1453, 1735, 2785, 2817
SchI GAGTC 6 cut(s) 463, 737, 1730, 1874, 1982, 2585
ScrFI CCNGG 4 cut(s) 355, 2338, 2448, 2793
SduI GDGCHC 7 cut(s) 89, 232, 318, 939, 1257, 1687, 2336
SfaNI GCATC 6 cut(s) 377, 1513, 2249, 2313, 2486, 2635
SfcI CTRYAG 3 cut(s) 306, 1394, 1771
SfoI GGCGCC 2 cut(s) 24, 2417
SgrDI CGTCGACG 1 cut(s) 62
SinI GGWCC 6 cut(s) 30, 68, 1369, 1708, 1940, 2823
SmiMI CAYNNNNRTG 3 cut(s) 287, 496, 498
SmlI CTYRAG 4 cut(s) 683, 1649, 1739, 2001
SmoI CTYRAG 4 cut(s) 683, 1649, 1739, 2001
SphI GCATGC 2 cut(s) 368, 1700
SspDI GGCGCC 2 cut(s) 22, 2415
SspMI CTAG 7 cut(s) 779, 788, 1944, 2151, 2166, 2175, 2709
SstI GAGCTC 2 cut(s) 318, 2336
StyD4I CCNGG 4 cut(s) 353, 2336, 2446, 2791
StyI CCWWGG 1 cut(s) 940
TaaI ACNGT 5 cut(s) 68, 897, 2072, 2572, 2629
TaiI ACGT 4 cut(s) 63, 132, 2380, 2564
TaqI TCGA 2 cut(s) 63, 318
TatI WGTACW 2 cut(s) 530, 1600
TauI GCSGC 5 cut(s) 13, 79, 111, 117, 2766
Tru1I TTAA 7 cut(s) 527, 599, 684, 930, 1269, 2564, 2631
Tru9I TTAA 7 cut(s) 527, 599, 684, 930, 1269, 2564, 2631
TscAI CASTG 7 cut(s) 87, 900, 1620, 1775, 2193, 2442, 2632
TseFI GTSAC 4 cut(s) 1722, 2389, 2554, 2738
Tsp45I GTSAC 4 cut(s) 1722, 2389, 2554, 2738
TspGWI ACGGA 2 cut(s) 1741, 2702
TspRI CASTG 7 cut(s) 87, 900, 1620, 1775, 2193, 2442, 2632
Tth111I GACNNNGTC 1 cut(s) 788
Van91I CCANNNNNTGG 1 cut(s) 184
Vha464I CTTAAG 1 cut(s) 683
VpaK11BI GGWCC 6 cut(s) 30, 68, 1369, 1708, 1940, 2823
XagI CCTNNNNNAGG 2 cut(s) 707, 2549
XapI RAATTY 9 cut(s) 271, 636, 874, 885, 1162, 1171, 1278, 1320, 2216
XbaI TCTAGA 2 cut(s) 2165, 2174
XceI RCATGY 4 cut(s) 368, 857, 1700, 2459
XmiI GTMKAC 3 cut(s) 63, 350, 2541
XmnI GAANNNNTTC 1 cut(s) 1193
XspI CTAG 7 cut(s) 779, 788, 1944, 2151, 2166, 2175, 2709
Zsp2I ATGCAT 2 cut(s) 370, 859
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.