Rorug07G0234900

nuclear matrix constituent protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0001591
Physical Location & Seq
Reverse (-)
21551900 .. 21553721
1822 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0234900.1

Sequence Viewer

Length: 1626 bp
ATGACAACTAAATACTTTCTACTGTCGTTCTCCCTCTTGATCACCGCAGCTGCTGCTGCTTCCGGCGGCGGCGGCCGGTGGCAGGTCTTGCAGAAAAGTATTGGGATTTCAGCCATGCACATGCAGCTGCTGCGCAACGACCGAGTCATCATGTTCGACCGAACGGATTTCGGAAAATCAAATTTGTCGCTGCCGAGGGGAATCTGCCGGAGGAACCCAAACGACACCGCGTTGAAGGTCGACTGTACCGCACATTCGGTCGAGTACGACGTGGCGAGTAACTCTTTCCGACCGCTCATGCTGTTTTCCGACACTTGGTGCTCCTCCGGGTCAGTCAGCCCCAACGGCAGTCTCGTTCAGACTGGGGGGTGGAACGACGGTGAGCTAAGGGTGAGACTGTTTGAGCCGTGCAGCAGTTGTGATTGGGTGGAGATTGCGCATGCGCTGGCCCACCCAAGGTGGTATGCAACAAATCACCTGCTGCCAGATGGCAGGCTTATAATCGTTGGCGGACGCTCGCAGCCAAACTTTGAATTTTTTCCCAAGACCAAGGACGGGGAGGGGTCGATCACTGTGCCTTTCCTTGACGAAACAAAGGACGCCGTAGAGGACAATCTGTACCCTTTTGTTTTCCTCAACGTTGATGGCAATTTATTCATATATGCCAACAATCGAGCAATTCTTCTGAACTACGTTACCGGAGAAACTGTGAAGACTTATCCCACAATATCGGGCGGCGATCCGAGATCGTACCCCAGCACCGGTTCCGCCGTCCTGCTCCCTTTGAAGGTTCAAAACGGTACTGTGGCGGAGGCGCAAGTCCTCGTCTGCGGCGGAGCTCCGCTAGGCTCCTACGACAAGGCTCTCAACAAGGGGATTTTCTTGGACGCTTTGAACACCTGCGCCCGCATGACCATAACCGATCCAAATCCTCAATGGAATTTGGACACCATGCCCAGCCCAAGAGTCATGCCCGACATGACTTTGCTGCCTGACGGAAGTGTCCTCATAATCAATGGCGGATCGCAAGGCTCAGCAGGCTGGGAGCTGGGCCGAGGGCCGGTTCTCAACCCAACTGTTTACAAGCCGGAAAATCCGGCCGGTTCCCGCTTTGAGATCATGAATCCGACGTCCATCCCTCGCATGTACCACTCGACCGCCGTTCTCTTACGTGACGGTCGCGTGTTGGTCGGTGGGAGCAATCCACACCAGGGATACATGTTTTCCTCCGTGCTCTTCCCAACCGAACTTTCCTTGGAAGCATTTTATCCGGAATATCTCAATCCTGAATTCTCCGATGTTCGTCCCACTGTGAGTGCACCCAAATCTCAACAAGTTGTTGGCTACGGGCAAAAGGTACAGATTCAATTTTCTATATCCGGGAAACTTGCCGCTCAATCCTTGTTCGCATCGATGATTTCTCCATCATTTTCAACCCACTCGTTCTCCATGAACCAACGGTCATTACTTCTCTCTATTGACAATGTCGTATCAGCGGGTAATCGGACATATCAAGGGCAGCTCACCATGCCAAGTGATCCTAACCTGGCCCCCTCTTCGTATTTTATGCTCTATGTTGTTCATCAAAACATACCAAGTGAGGCCACTTGGATCCGCATTGCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

541

Amino Acids

59.1

Weight (kDa)

6.32

Isoelectric Point (pI)

37.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxal_oxid_N PF07250 39 - 426 8.7e-179 Glyoxal oxidase N-terminus
GO-like_E_set PF09118 435 - 540 6.3e-26 Galactose oxidase-like, Early set domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 500
AarI CACCTGC 2 cut(s) 486, 908
AasI GACNNNNNNGTC 1 cut(s) 1001
AatII GACGTC 1 cut(s) 1133
Acc16I TGCGCA 2 cut(s) 134, 438
Acc36I ACCTGC 3 cut(s) 73, 486, 908
AccBSI CCGCTC 2 cut(s) 295, 1394
AccI GTMKAC 1 cut(s) 240
AccII CGCG 2 cut(s) 230, 1182
AccIII TCCGGA 1 cut(s) 1270
AclI AACGTT 1 cut(s) 639
AclWI GGATC 6 cut(s) 734, 917, 1030, 1532, 1606, 1619
AcoI YGGCCR 2 cut(s) 73, 1098
AcsI RAATTY 4 cut(s) 181, 533, 940, 1289
AcyI GRCGYC 2 cut(s) 600, 1130
AdeI CACNNNGTG 1 cut(s) 318
AfaI GTAC 7 cut(s) 247, 266, 620, 752, 802, 1148, 1359
AfiI CCNNNNNNNGG 8 cut(s) 82, 315, 456, 555, 761, 787, 1060, 1211
AflIII ACRYGT 1 cut(s) 1218
AgeI ACCGGT 1 cut(s) 761
AgsI TTSAA 7 cut(s) 235, 533, 787, 794, 895, 1367, 1434
AjiI CACGTC 1 cut(s) 271
AjnI CCWGG 2 cut(s) 1209, 1545
AjuI GAANNNNNNNTTGG 2 cut(s) 1234, 1266
AluBI AGCT 6 cut(s) 50, 127, 385, 839, 1048, 1522
AluI AGCT 6 cut(s) 50, 127, 385, 839, 1048, 1522
Alw21I GWGCWC 4 cut(s) 323, 841, 1236, 1321
Alw26I GTCTC 2 cut(s) 356, 388
Alw44I GTGCAC 1 cut(s) 1317
AlwI GGATC 6 cut(s) 734, 917, 1030, 1532, 1606, 1619
AlwNI CAGNNNCTG 2 cut(s) 53, 130
Aor13HI TCCGGA 1 cut(s) 1270
AoxI GGCC 7 cut(s) 73, 447, 1051, 1058, 1098, 1548, 1602
ApaLI GTGCAC 1 cut(s) 1317
ApoI RAATTY 4 cut(s) 181, 533, 940, 1289
AsiGI ACCGGT 1 cut(s) 761
Asp700I GAANNNNTTC 1 cut(s) 537
AspLEI GCGC 5 cut(s) 135, 439, 445, 817, 905
AspS9I GGNCC 4 cut(s) 448, 1051, 1058, 1549
AsuC2I CCSGG 2 cut(s) 328, 1381
AsuHPI GGTGA 5 cut(s) 34, 392, 403, 467, 1516
BaeGI GKGCMC 1 cut(s) 1321
BamHI GGATCC 1 cut(s) 1611
BanII GRGCYC 1 cut(s) 841
BbsI GAAGAC 1 cut(s) 719
Bbv12I GWGCWC 4 cut(s) 323, 841, 1236, 1321
BccI CCATC 4 cut(s) 482, 638, 1142, 1432
BceAI ACGGC 5 cut(s) 361, 391, 587, 755, 1145
BcgI CGANNNNNNTGC 2 cut(s) 556, 590
BciT130I CCWGG 2 cut(s) 1211, 1547
BciVI GTATCC 1 cut(s) 1208
BclI TGATCA 1 cut(s) 39
BcnI CCSGG 2 cut(s) 328, 1381
BcoDI GTCTC 2 cut(s) 356, 388
BfaI CTAG 1 cut(s) 845
BfuAI ACCTGC 3 cut(s) 73, 486, 908
BfuI GTATCC 1 cut(s) 1208
BglI GCCNNNNNGGC 1 cut(s) 345
BlpI GCTNAGC 1 cut(s) 1033
Bme1390I CCNGG 4 cut(s) 328, 1211, 1381, 1547
BmgBI CACGTC 1 cut(s) 271
BmgT120I GGNCC 4 cut(s) 448, 1051, 1058, 1549
BmiI GGNNCC 6 cut(s) 215, 766, 850, 1105, 1551, 1613
BmrFI CCNGG 4 cut(s) 328, 1211, 1381, 1547
BmrI ACTGGG 1 cut(s) 372
BmsI GCATC 1 cut(s) 1418
BmuI ACTGGG 1 cut(s) 372
BpiI GAAGAC 1 cut(s) 719
Bpu10I CCTNAGC 1 cut(s) 386
Bpu1102I GCTNAGC 1 cut(s) 1033
BpuMI CCSGG 2 cut(s) 328, 1381
Bsa29I ATCGAT 1 cut(s) 1412
BsaAI YACGTR 1 cut(s) 1172
BsaBI GATNNNNATC 1 cut(s) 927
BsaHI GRCGYC 2 cut(s) 600, 1130
BsaJI CCNNGG 6 cut(s) 194, 455, 549, 1054, 1210, 1254
BsaWI WCCGGW 3 cut(s) 698, 761, 1270
BsaXI ACNNNNNCTCC 4 cut(s) 693, 723, 1430, 1460
Bsc4I CCNNNNNNNGG 8 cut(s) 82, 315, 456, 555, 761, 787, 1060, 1211
Bse118I RCCGGY 4 cut(s) 75, 761, 1060, 1100
Bse1I ACTGG 1 cut(s) 367
Bse3DI GCAATG 1 cut(s) 1617
Bse8I GATNNNNATC 1 cut(s) 927
BseAI TCCGGA 1 cut(s) 1270
BseBI CCWGG 2 cut(s) 1211, 1547
BseCI ATCGAT 1 cut(s) 1412
BseDI CCNNGG 6 cut(s) 194, 455, 549, 1054, 1210, 1254
BseGI GGATG 1 cut(s) 1134
BseJI GATNNNNATC 1 cut(s) 927
BseLI CCNNNNNNNGG 8 cut(s) 82, 315, 456, 555, 761, 787, 1060, 1211
BseMI GCAATG 1 cut(s) 1617
BseMII CTCAG 1 cut(s) 1047
BseNI ACTGG 1 cut(s) 367
BseRI GAGGAG 1 cut(s) 313
BseSI GKGCMC 1 cut(s) 1321
BseX3I CGGCCG 2 cut(s) 73, 1098
BseYI CCCAGC 4 cut(s) 755, 956, 1041, 1048
BsgI GTGCAG 1 cut(s) 430
Bsh1236I CGCG 2 cut(s) 230, 1182
Bsh1285I CGRYCG 8 cut(s) 76, 142, 160, 261, 293, 1101, 1158, 1180
BshFI GGCC 7 cut(s) 75, 449, 1053, 1060, 1100, 1550, 1604
BshTI ACCGGT 1 cut(s) 761
BshVI ATCGAT 1 cut(s) 1412
BsiEI CGRYCG 8 cut(s) 76, 142, 160, 261, 293, 1101, 1158, 1180
BsiHKAI GWGCWC 4 cut(s) 323, 841, 1236, 1321
BslFI GGGAC 1 cut(s) 1290
BslI CCNNNNNNNGG 8 cut(s) 82, 315, 456, 555, 761, 787, 1060, 1211
BsmAI GTCTC 2 cut(s) 356, 388
BsmFI GGGAC 1 cut(s) 1290
BsnI GGCC 7 cut(s) 75, 449, 1053, 1060, 1100, 1550, 1604
Bsp1286I GDGCHC 4 cut(s) 323, 841, 1236, 1321
Bsp13I TCCGGA 1 cut(s) 1270
Bsp143I GATC 9 cut(s) 39, 567, 739, 746, 922, 1022, 1116, 1537, 1611
Bsp1720I GCTNAGC 1 cut(s) 1033
BspANI GGCC 7 cut(s) 75, 449, 1053, 1060, 1100, 1550, 1604
BspCNI CTCAG 1 cut(s) 1046
BspDI ATCGAT 1 cut(s) 1412
BspEI TCCGGA 1 cut(s) 1270
BspFNI CGCG 2 cut(s) 230, 1182
BspHI TCATGA 1 cut(s) 1119
BspLI GGNNCC 6 cut(s) 215, 766, 850, 1105, 1551, 1613
BspMI ACCTGC 3 cut(s) 73, 486, 908
BspPI GGATC 6 cut(s) 734, 917, 1030, 1532, 1606, 1619
BspQI GCTCTTC 1 cut(s) 1241
BsrBI CCGCTC 2 cut(s) 295, 1394
BsrDI GCAATG 1 cut(s) 1617
BsrFI RCCGGY 4 cut(s) 75, 761, 1060, 1100
BsrI ACTGG 1 cut(s) 367
BssAI RCCGGY 4 cut(s) 75, 761, 1060, 1100
BssECI CCNNGG 6 cut(s) 194, 455, 549, 1054, 1210, 1254
BssMI GATC 9 cut(s) 39, 567, 739, 746, 922, 1022, 1116, 1537, 1611
BssNI GRCGYC 2 cut(s) 600, 1130
BssT1I CCWWGG 3 cut(s) 455, 549, 1254
Bst2UI CCWGG 2 cut(s) 1211, 1547
Bst6I CTCTTC 2 cut(s) 1241, 1561
BstACI GRCGYC 2 cut(s) 600, 1130
BstAPI GCANNNNNTGC 3 cut(s) 53, 88, 130
BstBAI YACGTR 1 cut(s) 1172
BstC8I GCNNGC 6 cut(s) 441, 447, 494, 518, 907, 1039
BstDEI CTNAG 2 cut(s) 386, 1033
BstF5I GGATG 1 cut(s) 1134
BstFNI CGCG 2 cut(s) 230, 1182
BstHHI GCGC 5 cut(s) 135, 439, 445, 817, 905
BstKTI GATC 9 cut(s) 42, 570, 742, 749, 925, 1025, 1119, 1540, 1614
BstMAI GTCTC 2 cut(s) 356, 388
BstMBI GATC 9 cut(s) 39, 567, 739, 746, 922, 1022, 1116, 1537, 1611
BstMCI CGRYCG 8 cut(s) 76, 142, 160, 261, 293, 1101, 1158, 1180
BstMWI GCNNNNNNNGC 9 cut(s) 53, 56, 72, 88, 124, 130, 345, 1038, 1528
BstNI CCWGG 2 cut(s) 1211, 1547
BstNSI RCATGY 4 cut(s) 124, 443, 1147, 1222
BstSCI CCNGG 4 cut(s) 326, 1209, 1379, 1545
BstSLI GKGCMC 1 cut(s) 1321
BstUI CGCG 2 cut(s) 230, 1182
BstV2I GAAGAC 1 cut(s) 719
BstX2I RGATCY 1 cut(s) 1611
BstYI RGATCY 1 cut(s) 1611
BstZI CGGCCG 2 cut(s) 73, 1098
Bsu15I ATCGAT 1 cut(s) 1412
BsuI GTATCC 1 cut(s) 1208
BsuRI GGCC 7 cut(s) 75, 449, 1053, 1060, 1100, 1550, 1604
BsuTUI ATCGAT 1 cut(s) 1412
BtrI CACGTC 1 cut(s) 271
BtsCI GGATG 1 cut(s) 1134
BtsIMutI CAGTG 2 cut(s) 570, 1308
BveI ACCTGC 3 cut(s) 73, 486, 908
Cac8I GCNNGC 6 cut(s) 441, 447, 494, 518, 907, 1039
CaiI CAGNNNCTG 2 cut(s) 53, 130
CciI TCATGA 1 cut(s) 1119
CfoI GCGC 5 cut(s) 135, 439, 445, 817, 905
Cfr10I RCCGGY 4 cut(s) 75, 761, 1060, 1100
Cfr13I GGNCC 4 cut(s) 448, 1051, 1058, 1549
ClaI ATCGAT 1 cut(s) 1412
CseI GACGC 3 cut(s) 522, 608, 896
Csp6I GTAC 7 cut(s) 246, 265, 619, 751, 801, 1147, 1358
CspAI ACCGGT 1 cut(s) 761
CviQI GTAC 7 cut(s) 246, 265, 619, 751, 801, 1147, 1358
DdeI CTNAG 2 cut(s) 386, 1033
DpnI GATC 9 cut(s) 41, 569, 741, 748, 924, 1024, 1118, 1539, 1613
DpnII GATC 9 cut(s) 39, 567, 739, 746, 922, 1022, 1116, 1537, 1611
DraIII CACNNNGTG 1 cut(s) 318
DrdI GACNNNNNNGTC 1 cut(s) 1001
DseDI GACNNNNNNGTC 1 cut(s) 1001
EaeI YGGCCR 2 cut(s) 73, 1098
EagI CGGCCG 2 cut(s) 73, 1098
Eam1104I CTCTTC 2 cut(s) 1241, 1561
EarI CTCTTC 2 cut(s) 1241, 1561
EciI GGCGGA 5 cut(s) 525, 757, 824, 849, 1035
Ecl136II GAGCTC 1 cut(s) 839
EclXI CGGCCG 2 cut(s) 73, 1098
Eco130I CCWWGG 3 cut(s) 455, 549, 1254
Eco24I GRGCYC 1 cut(s) 841
Eco52I CGGCCG 2 cut(s) 73, 1098
Eco53kI GAGCTC 1 cut(s) 839
EcoICRI GAGCTC 1 cut(s) 839
EcoRI GAATTC 1 cut(s) 1289
EcoRII CCWGG 2 cut(s) 1209, 1545
EcoT14I CCWWGG 3 cut(s) 455, 549, 1254
EcoT38I GRGCYC 1 cut(s) 841
ErhI CCWWGG 3 cut(s) 455, 549, 1254
FaqI GGGAC 1 cut(s) 1290
FauI CCCGC 3 cut(s) 914, 1115, 1489
FbaI TGATCA 1 cut(s) 39
FblI GTMKAC 1 cut(s) 240
FokI GGATG 1 cut(s) 1121
FriOI GRGCYC 1 cut(s) 841
FspBI CTAG 1 cut(s) 845
FspI TGCGCA 2 cut(s) 134, 438
GlaI GCGC 5 cut(s) 134, 438, 444, 816, 904
GsaI CCCAGC 4 cut(s) 759, 960, 1045, 1052
HaeIII GGCC 7 cut(s) 75, 449, 1053, 1060, 1100, 1550, 1604
HgaI GACGC 3 cut(s) 522, 608, 896
HhaI GCGC 5 cut(s) 135, 439, 445, 817, 905
Hin1I GRCGYC 2 cut(s) 600, 1130
Hin6I GCGC 5 cut(s) 133, 437, 443, 815, 903
HinP1I GCGC 5 cut(s) 133, 437, 443, 815, 903
HincII GTYRAC 1 cut(s) 241
HindII GTYRAC 1 cut(s) 241
HinfI GANTC 5 cut(s) 144, 201, 966, 1123, 1363
HphI GGTGA 5 cut(s) 34, 392, 403, 467, 1516
Hpy166II GTNNAC 3 cut(s) 241, 1081, 1319
Hpy188I TCNGA 9 cut(s) 173, 290, 310, 360, 687, 744, 1128, 1297, 1506
Hpy188III TCNNGA 4 cut(s) 37, 1120, 1271, 1286
Hpy8I GTNNAC 3 cut(s) 241, 1081, 1319
Hpy99I CGWCG 3 cut(s) 272, 380, 1132
HpyAV CCTTC 2 cut(s) 229, 781
HpyCH4IV ACGT 5 cut(s) 270, 639, 693, 1130, 1171
HpyCH4V TGCA 6 cut(s) 91, 118, 124, 411, 467, 1319
HpyF10VI GCNNNNNNNGC 9 cut(s) 53, 56, 72, 88, 124, 130, 345, 1038, 1528
HpyF3I CTNAG 2 cut(s) 386, 1033
HpySE526I ACGT 5 cut(s) 270, 639, 693, 1130, 1171
Hsp92I GRCGYC 2 cut(s) 600, 1130
HspAI GCGC 5 cut(s) 133, 437, 443, 815, 903
Kpn2I TCCGGA 1 cut(s) 1270
Ksp22I TGATCA 1 cut(s) 39
Kzo9I GATC 9 cut(s) 39, 567, 739, 746, 922, 1022, 1116, 1537, 1611
LguI GCTCTTC 1 cut(s) 1241
LmnI GCTCC 7 cut(s) 326, 783, 836, 844, 854, 1045, 1197
LweI GCATC 1 cut(s) 1418
MaeI CTAG 1 cut(s) 845
MaeII ACGT 5 cut(s) 270, 639, 693, 1130, 1171
MaeIII GTNAC 3 cut(s) 278, 694, 1172
MalI GATC 9 cut(s) 41, 569, 741, 748, 924, 1024, 1118, 1539, 1613
MbiI CCGCTC 2 cut(s) 295, 1394
MboI GATC 9 cut(s) 39, 567, 739, 746, 922, 1022, 1116, 1537, 1611
MboII GAAGA 4 cut(s) 674, 724, 1228, 1548
MflI RGATCY 1 cut(s) 1611
MhlI GDGCHC 4 cut(s) 323, 841, 1236, 1321
MluCI AATT 7 cut(s) 181, 533, 649, 678, 940, 1289, 1367
MlyI GAGTC 2 cut(s) 153, 975
MmeI TCCRAC 3 cut(s) 313, 333, 1151
MroI TCCGGA 1 cut(s) 1270
MroXI GAANNNNTTC 1 cut(s) 537
MslI CAYNNNNRTG 1 cut(s) 119
MspA1I CMGCKG 3 cut(s) 50, 127, 1496
MspR9I CCNGG 4 cut(s) 328, 1211, 1381, 1547
MvaI CCWGG 2 cut(s) 1211, 1547
MvnI CGCG 2 cut(s) 230, 1182
MwoI GCNNNNNNNGC 9 cut(s) 53, 56, 72, 88, 124, 130, 345, 1038, 1528
NciI CCSGG 2 cut(s) 328, 1381
NdeII GATC 9 cut(s) 39, 567, 739, 746, 922, 1022, 1116, 1537, 1611
NlaIV GGNNCC 6 cut(s) 215, 766, 850, 1105, 1551, 1613
NmeAIII GCCGAG 2 cut(s) 219, 1079
NmuCI GTSAC 1 cut(s) 1172
NsbI TGCGCA 2 cut(s) 134, 438
NspI RCATGY 4 cut(s) 124, 443, 1147, 1222
PaeI GCATGC 1 cut(s) 443
PagI TCATGA 1 cut(s) 1119
PaqCI CACCTGC 2 cut(s) 486, 908
PciI ACATGT 1 cut(s) 1218
PciSI GCTCTTC 1 cut(s) 1241
PcsI WCGNNNNNNNCGW 2 cut(s) 267, 351
PdmI GAANNNNTTC 1 cut(s) 537
PfeI GAWTC 3 cut(s) 201, 1123, 1363
PflFI GACNNNGTC 2 cut(s) 143, 1484
PfoI TCCNGGA 1 cut(s) 1379
PinAI ACCGGT 1 cut(s) 761
PleI GAGTC 2 cut(s) 152, 974
PpsI GAGTC 2 cut(s) 152, 974
Ppu21I YACGTR 1 cut(s) 1172
PscI ACATGT 1 cut(s) 1218
PsiI TTATAA 1 cut(s) 500
Psp124BI GAGCTC 1 cut(s) 841
Psp1406I AACGTT 1 cut(s) 639
Psp6I CCWGG 2 cut(s) 1209, 1545
PspFI CCCAGC 4 cut(s) 755, 956, 1041, 1048
PspGI CCWGG 2 cut(s) 1209, 1545
PspN4I GGNNCC 6 cut(s) 215, 766, 850, 1105, 1551, 1613
PspPI GGNCC 4 cut(s) 448, 1051, 1058, 1549
PstNI CAGNNNCTG 2 cut(s) 53, 130
PsuI RGATCY 1 cut(s) 1611
PsyI GACNNNGTC 2 cut(s) 143, 1484
PvuII CAGCTG 2 cut(s) 50, 127
RsaI GTAC 7 cut(s) 247, 266, 620, 752, 802, 1148, 1359
RsaNI GTAC 7 cut(s) 246, 265, 619, 751, 801, 1147, 1358
RseI CAYNNNNRTG 1 cut(s) 119
SacI GAGCTC 1 cut(s) 841
SalI GTCGAC 1 cut(s) 239
SapI GCTCTTC 1 cut(s) 1241
Sau3AI GATC 9 cut(s) 39, 567, 739, 746, 922, 1022, 1116, 1537, 1611
Sau96I GGNCC 4 cut(s) 448, 1051, 1058, 1549
SchI GAGTC 2 cut(s) 153, 975
ScrFI CCNGG 4 cut(s) 328, 1211, 1381, 1547
SduI GDGCHC 4 cut(s) 323, 841, 1236, 1321
SfaNI GCATC 1 cut(s) 1418
SmiMI CAYNNNNRTG 1 cut(s) 119
SphI GCATGC 1 cut(s) 443
Sse9I AATT 7 cut(s) 181, 533, 649, 678, 940, 1289, 1367
SspMI CTAG 1 cut(s) 845
SstI GAGCTC 1 cut(s) 841
StyD4I CCNGG 4 cut(s) 326, 1209, 1379, 1545
StyI CCWWGG 3 cut(s) 455, 549, 1254
TaiI ACGT 5 cut(s) 273, 642, 696, 1133, 1174
TaqI TCGA 7 cut(s) 156, 240, 261, 566, 673, 1154, 1412
TaqII GACCGA 3 cut(s) 156, 174, 247
TasI AATT 7 cut(s) 181, 533, 649, 678, 940, 1289, 1367
TauI GCSGC 6 cut(s) 69, 72, 75, 738, 834, 1394
TfiI GAWTC 3 cut(s) 201, 1123, 1363
TscAI CASTG 2 cut(s) 577, 1315
TseFI GTSAC 1 cut(s) 1172
Tsp45I GTSAC 1 cut(s) 1172
TspDTI ATGAA 4 cut(s) 646, 1136, 1466, 1571
TspGWI ACGGA 3 cut(s) 179, 1011, 1219
TspRI CASTG 2 cut(s) 577, 1315
Tth111I GACNNNGTC 2 cut(s) 143, 1484
VneI GTGCAC 1 cut(s) 1317
XapI RAATTY 4 cut(s) 181, 533, 940, 1289
XceI RCATGY 4 cut(s) 124, 443, 1147, 1222
XcmI CCANNNNNNNNNTGG 1 cut(s) 933
XmiI GTMKAC 1 cut(s) 240
XmnI GAANNNNTTC 1 cut(s) 537
XspI CTAG 1 cut(s) 845
ZraI GACGTC 1 cut(s) 1131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.