The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1007 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 106 |
| Acc16I | TGCGCA | 1 cut(s) | 1284 |
| AccB1I | GGYRCC | 1 cut(s) | 238 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1478 |
| AccBSI | CCGCTC | 2 cut(s) | 55, 1444 |
| AccI | GTMKAC | 1 cut(s) | 1465 |
| AccII | CGCG | 3 cut(s) | 31, 70, 85 |
| AccIII | TCCGGA | 1 cut(s) | 110 |
| AclI | AACGTT | 1 cut(s) | 311 |
| AclWI | GGATC | 2 cut(s) | 129, 527 |
| AcoI | YGGCCR | 3 cut(s) | 219, 542, 1028 |
| AcsI | RAATTY | 3 cut(s) | 337, 578, 1106 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 34, 96, 1171, 1275, 1425, 1478 |
| AgsI | TTSAA | 6 cut(s) | 247, 377, 656, 697, 868, 1021 |
| AjiI | CACGTC | 1 cut(s) | 253 |
| AjnI | CCWGG | 1 cut(s) | 1170 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 322, 354 |
| AluBI | AGCT | 3 cut(s) | 93, 1360, 1460 |
| AluI | AGCT | 3 cut(s) | 93, 1360, 1460 |
| Alw21I | GWGCWC | 2 cut(s) | 80, 1311 |
| Alw26I | GTCTC | 3 cut(s) | 681, 785, 793 |
| AlwI | GGATC | 2 cut(s) | 129, 527 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1478 |
| Ama87I | CYCGRG | 1 cut(s) | 59 |
| Aor13HI | TCCGGA | 1 cut(s) | 110 |
| AoxI | GGCC | 8 cut(s) | 56, 157, 175, 219, 542, 740, 1028, 1185 |
| ApaI | GGGCCC | 2 cut(s) | 161, 1189 |
| ApeKI | GCWGC | 2 cut(s) | 1415, 1457 |
| ApoI | RAATTY | 3 cut(s) | 337, 578, 1106 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 173, 205 |
| AseI | ATTAAT | 1 cut(s) | 456 |
| AspA2I | CCTAGG | 1 cut(s) | 677 |
| AspLEI | GCGC | 3 cut(s) | 40, 72, 1285 |
| AsuC2I | CCSGG | 3 cut(s) | 97, 161, 206 |
| AsuHPI | GGTGA | 5 cut(s) | 57, 304, 515, 1066, 1079 |
| AvaI | CYCGRG | 1 cut(s) | 59 |
| AvaII | GGWCC | 4 cut(s) | 87, 99, 104, 1123 |
| AvrII | CCTAGG | 1 cut(s) | 677 |
| BaeGI | GKGCMC | 3 cut(s) | 161, 258, 1189 |
| BalI | TGGCCA | 2 cut(s) | 544, 1030 |
| BanI | GGYRCC | 1 cut(s) | 238 |
| BanII | GRGCYC | 3 cut(s) | 161, 525, 1189 |
| BauI | CACGAG | 1 cut(s) | 73 |
| BbsI | GAAGAC | 2 cut(s) | 678, 704 |
| Bbv12I | GWGCWC | 2 cut(s) | 80, 1311 |
| BbvI | GCAGC | 2 cut(s) | 1427, 1469 |
| BccI | CCATC | 2 cut(s) | 1262, 1342 |
| BceAI | ACGGC | 3 cut(s) | 190, 727, 847 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 384, 418 |
| BciT130I | CCWGG | 1 cut(s) | 1172 |
| BclI | TGATCA | 2 cut(s) | 1207, 1354 |
| BcnI | CCSGG | 3 cut(s) | 97, 161, 206 |
| BcoDI | GTCTC | 3 cut(s) | 681, 785, 793 |
| BfaI | CTAG | 3 cut(s) | 678, 1461, 1508 |
| BfmI | CTRYAG | 4 cut(s) | 342, 439, 775, 1466 |
| BfoI | RGCGCY | 1 cut(s) | 41 |
| BisI | GCNGC | 4 cut(s) | 56, 83, 1416, 1458 |
| BlnI | CCTAGG | 1 cut(s) | 677 |
| BlsI | GCNGC | 4 cut(s) | 57, 84, 1417, 1459 |
| Bme1390I | CCNGG | 4 cut(s) | 97, 161, 206, 1172 |
| Bme18I | GGWCC | 4 cut(s) | 87, 99, 104, 1123 |
| BmeT110I | CYCGRG | 1 cut(s) | 59 |
| BmgBI | CACGTC | 1 cut(s) | 253 |
| BmiI | GGNNCC | 7 cut(s) | 127, 159, 240, 984, 1125, 1187, 1298 |
| BmrFI | CCNGG | 4 cut(s) | 97, 161, 206, 1172 |
| BmsI | GCATC | 3 cut(s) | 404, 592, 1136 |
| BpiI | GAAGAC | 2 cut(s) | 678, 704 |
| BpmI | CTGGAG | 2 cut(s) | 845, 1354 |
| BpuMI | CCSGG | 3 cut(s) | 97, 161, 206 |
| BsaJI | CCNNGG | 4 cut(s) | 29, 83, 677, 1269 |
| BsaWI | WCCGGW | 2 cut(s) | 101, 110 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 974, 1004 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 34, 96, 1171, 1275, 1425, 1478 |
| Bse118I | RCCGGY | 1 cut(s) | 221 |
| Bse1I | ACTGG | 5 cut(s) | 1031, 1298, 1371, 1472, 1483 |
| Bse3DI | GCAATG | 2 cut(s) | 368, 857 |
| BseAI | TCCGGA | 1 cut(s) | 110 |
| BseBI | CCWGG | 1 cut(s) | 1172 |
| BseDI | CCNNGG | 4 cut(s) | 29, 83, 677, 1269 |
| BseGI | GGATG | 3 cut(s) | 55, 1151, 1357 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 34, 96, 1171, 1275, 1425, 1478 |
| BseMI | GCAATG | 2 cut(s) | 368, 857 |
| BseMII | CTCAG | 3 cut(s) | 31, 786, 807 |
| BseNI | ACTGG | 5 cut(s) | 1031, 1298, 1371, 1472, 1483 |
| BseSI | GKGCMC | 3 cut(s) | 161, 258, 1189 |
| BseXI | GCAGC | 2 cut(s) | 1427, 1469 |
| Bsh1236I | CGCG | 3 cut(s) | 31, 70, 85 |
| BshFI | GGCC | 8 cut(s) | 58, 159, 177, 221, 544, 742, 1030, 1187 |
| BshNI | GGYRCC | 1 cut(s) | 238 |
| BsiHKAI | GWGCWC | 2 cut(s) | 80, 1311 |
| BsiHKCI | CYCGRG | 1 cut(s) | 59 |
| BsiSI | CCGG | 7 cut(s) | 97, 102, 111, 161, 206, 222, 1138 |
| BslFI | GGGAC | 1 cut(s) | 1109 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 34, 96, 1171, 1275, 1425, 1478 |
| BsmAI | GTCTC | 3 cut(s) | 681, 785, 793 |
| BsmFI | GGGAC | 1 cut(s) | 1109 |
| BsmI | GAATGC | 2 cut(s) | 1285, 1459 |
| BsnI | GGCC | 8 cut(s) | 58, 159, 177, 221, 544, 742, 1030, 1187 |
| BsoBI | CYCGRG | 1 cut(s) | 59 |
| Bsp120I | GGGCCC | 2 cut(s) | 157, 1185 |
| Bsp1286I | GDGCHC | 6 cut(s) | 80, 161, 258, 525, 1189, 1311 |
| Bsp13I | TCCGGA | 1 cut(s) | 110 |
| Bsp143I | GATC | 6 cut(s) | 134, 167, 532, 628, 1207, 1354 |
| BspANI | GGCC | 8 cut(s) | 58, 159, 177, 221, 544, 742, 1030, 1187 |
| BspCNI | CTCAG | 3 cut(s) | 30, 787, 808 |
| BspEI | TCCGGA | 1 cut(s) | 110 |
| BspFNI | CGCG | 3 cut(s) | 31, 70, 85 |
| BspLI | GGNNCC | 7 cut(s) | 127, 159, 240, 984, 1125, 1187, 1298 |
| BspPI | GGATC | 2 cut(s) | 129, 527 |
| BspT107I | GGYRCC | 1 cut(s) | 238 |
| BsrBI | CCGCTC | 2 cut(s) | 55, 1444 |
| BsrDI | GCAATG | 2 cut(s) | 368, 857 |
| BsrFI | RCCGGY | 1 cut(s) | 221 |
| BsrI | ACTGG | 5 cut(s) | 1031, 1298, 1371, 1472, 1483 |
| BssAI | RCCGGY | 1 cut(s) | 221 |
| BssECI | CCNNGG | 4 cut(s) | 29, 83, 677, 1269 |
| BssMI | GATC | 6 cut(s) | 134, 167, 532, 628, 1207, 1354 |
| BssSI | CACGAG | 1 cut(s) | 73 |
| BssT1I | CCWWGG | 2 cut(s) | 677, 1269 |
| Bst2BI | CACGAG | 1 cut(s) | 73 |
| Bst2UI | CCWGG | 1 cut(s) | 1172 |
| Bst4CI | ACNGT | 5 cut(s) | 108, 143, 692, 1160, 1238 |
| Bst6I | CTCTTC | 1 cut(s) | 1071 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 370 |
| BstC8I | GCNNGC | 3 cut(s) | 80, 419, 423 |
| BstDEI | CTNAG | 4 cut(s) | 17, 333, 795, 816 |
| BstDSI | CCRYGG | 2 cut(s) | 29, 83 |
| BstEII | GGTNACC | 1 cut(s) | 1498 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1273 |
| BstF5I | GGATG | 3 cut(s) | 55, 1151, 1357 |
| BstFNI | CGCG | 3 cut(s) | 31, 70, 85 |
| BstH2I | RGCGCY | 1 cut(s) | 41 |
| BstHHI | GCGC | 3 cut(s) | 40, 72, 1285 |
| BstKTI | GATC | 6 cut(s) | 137, 170, 535, 631, 1210, 1357 |
| BstMAI | GTCTC | 3 cut(s) | 681, 785, 793 |
| BstMBI | GATC | 6 cut(s) | 134, 167, 532, 628, 1207, 1354 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 37, 183, 238, 294, 370, 431, 550, 611, 1184 |
| BstNI | CCWGG | 1 cut(s) | 1172 |
| BstNSI | RCATGY | 1 cut(s) | 190 |
| BstPI | GGTNACC | 1 cut(s) | 1498 |
| BstSCI | CCNGG | 4 cut(s) | 95, 159, 204, 1170 |
| BstSFI | CTRYAG | 4 cut(s) | 342, 439, 775, 1466 |
| BstSLI | GKGCMC | 3 cut(s) | 161, 258, 1189 |
| BstUI | CGCG | 3 cut(s) | 31, 70, 85 |
| BstV1I | GCAGC | 2 cut(s) | 1427, 1469 |
| BstV2I | GAAGAC | 2 cut(s) | 678, 704 |
| BsuRI | GGCC | 8 cut(s) | 58, 159, 177, 221, 544, 742, 1030, 1187 |
| BtgI | CCRYGG | 2 cut(s) | 29, 83 |
| BtrI | CACGTC | 1 cut(s) | 253 |
| BtsCI | GGATG | 3 cut(s) | 55, 1151, 1357 |
| BtsI | GCAGTG | 1 cut(s) | 1311 |
| BtsIMutI | CAGTG | 2 cut(s) | 1291, 1311 |
| Cac8I | GCNNGC | 3 cut(s) | 80, 419, 423 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1478 |
| CfoI | GCGC | 3 cut(s) | 40, 72, 1285 |
| Cfr10I | RCCGGY | 1 cut(s) | 221 |
| Cfr42I | CCGCGG | 2 cut(s) | 32, 86 |
| CpoI | CGGWCCG | 2 cut(s) | 99, 104 |
| CspI | CGGWCCG | 2 cut(s) | 99, 104 |
| CviAII | CATG | 7 cut(s) | 187, 526, 730, 1099, 1120, 1376, 1437 |
| DdeI | CTNAG | 4 cut(s) | 17, 333, 795, 816 |
| DpnI | GATC | 6 cut(s) | 136, 169, 534, 630, 1209, 1356 |
| DpnII | GATC | 6 cut(s) | 134, 167, 532, 628, 1207, 1354 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 106 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 106 |
| EaeI | YGGCCR | 3 cut(s) | 219, 542, 1028 |
| Eam1104I | CTCTTC | 1 cut(s) | 1071 |
| EarI | CTCTTC | 1 cut(s) | 1071 |
| EciI | GGCGGA | 1 cut(s) | 135 |
| Eco130I | CCWWGG | 2 cut(s) | 677, 1269 |
| Eco24I | GRGCYC | 3 cut(s) | 161, 525, 1189 |
| Eco47I | GGWCC | 4 cut(s) | 87, 99, 104, 1123 |
| Eco88I | CYCGRG | 1 cut(s) | 59 |
| Eco91I | GGTNACC | 1 cut(s) | 1498 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1273 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1185, 1186 |
| EcoO65I | GGTNACC | 1 cut(s) | 1498 |
| EcoRI | GAATTC | 1 cut(s) | 337 |
| EcoRII | CCWGG | 1 cut(s) | 1170 |
| EcoT14I | CCWWGG | 2 cut(s) | 677, 1269 |
| EcoT38I | GRGCYC | 3 cut(s) | 161, 525, 1189 |
| ErhI | CCWWGG | 2 cut(s) | 677, 1269 |
| FaeI | CATG | 7 cut(s) | 190, 529, 733, 1102, 1123, 1379, 1440 |
| FaqI | GGGAC | 1 cut(s) | 1109 |
| FatI | CATG | 7 cut(s) | 186, 525, 729, 1098, 1119, 1375, 1436 |
| FauI | CCCGC | 3 cut(s) | 36, 483, 842 |
| FbaI | TGATCA | 2 cut(s) | 1207, 1354 |
| FblI | GTMKAC | 1 cut(s) | 1465 |
| Fnu4HI | GCNGC | 4 cut(s) | 56, 83, 1416, 1458 |
| FokI | GGATG | 3 cut(s) | 62, 1158, 1364 |
| FriOI | GRGCYC | 3 cut(s) | 161, 525, 1189 |
| Fsp4HI | GCNGC | 4 cut(s) | 56, 83, 1416, 1458 |
| FspAI | RTGCGCAY | 1 cut(s) | 1284 |
| FspBI | CTAG | 3 cut(s) | 678, 1461, 1508 |
| FspI | TGCGCA | 1 cut(s) | 1284 |
| GlaI | GCGC | 3 cut(s) | 39, 71, 1284 |
| GluI | GCNGC | 4 cut(s) | 56, 83, 1416, 1458 |
| GsuI | CTGGAG | 2 cut(s) | 845, 1354 |
| HaeII | RGCGCY | 1 cut(s) | 41 |
| HaeIII | GGCC | 8 cut(s) | 58, 159, 177, 221, 544, 742, 1030, 1187 |
| HapII | CCGG | 7 cut(s) | 97, 102, 111, 161, 206, 222, 1138 |
| HhaI | GCGC | 3 cut(s) | 40, 72, 1285 |
| Hin1II | CATG | 7 cut(s) | 190, 529, 733, 1102, 1123, 1379, 1440 |
| Hin6I | GCGC | 3 cut(s) | 38, 70, 1283 |
| HinP1I | GCGC | 3 cut(s) | 38, 70, 1283 |
| HincII | GTYRAC | 2 cut(s) | 1096, 1219 |
| HindII | GTYRAC | 2 cut(s) | 1096, 1219 |
| HinfI | GANTC | 4 cut(s) | 62, 665, 904, 1246 |
| HpaI | GTTAAC | 1 cut(s) | 1096 |
| HpaII | CCGG | 7 cut(s) | 97, 102, 111, 161, 206, 222, 1138 |
| HphI | GGTGA | 5 cut(s) | 57, 304, 515, 1066, 1079 |
| Hpy166II | GTNNAC | 4 cut(s) | 23, 1096, 1219, 1466 |
| Hpy188I | TCNGA | 6 cut(s) | 49, 265, 670, 1047, 1113, 1331 |
| Hpy188III | TCNNGA | 4 cut(s) | 111, 583, 599, 835 |
| Hpy8I | GTNNAC | 4 cut(s) | 23, 1096, 1219, 1466 |
| HpyAV | CCTTC | 4 cut(s) | 28, 973, 1108, 1423 |
| HpyCH4III | ACNGT | 5 cut(s) | 108, 143, 692, 1160, 1238 |
| HpyCH4IV | ACGT | 2 cut(s) | 252, 311 |
| HpyCH4V | TGCA | 6 cut(s) | 553, 709, 857, 913, 1229, 1457 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 37, 183, 238, 294, 370, 431, 550, 611, 1184 |
| HpyF3I | CTNAG | 4 cut(s) | 17, 333, 795, 816 |
| HpySE526I | ACGT | 2 cut(s) | 252, 311 |
| Hsp92II | CATG | 7 cut(s) | 190, 529, 733, 1102, 1123, 1379, 1440 |
| HspAI | GCGC | 3 cut(s) | 38, 70, 1283 |
| Kpn2I | TCCGGA | 1 cut(s) | 110 |
| Ksp22I | TGATCA | 2 cut(s) | 1207, 1354 |
| KspAI | GTTAAC | 1 cut(s) | 1096 |
| KspI | CCGCGG | 2 cut(s) | 32, 86 |
| Kzo9I | GATC | 6 cut(s) | 134, 167, 532, 628, 1207, 1354 |
| LmnI | GCTCC | 3 cut(s) | 98, 982, 1441 |
| Lsp1109I | GCAGC | 2 cut(s) | 1427, 1469 |
| LweI | GCATC | 3 cut(s) | 404, 592, 1136 |
| MaeI | CTAG | 3 cut(s) | 678, 1461, 1508 |
| MaeII | ACGT | 2 cut(s) | 252, 311 |
| MaeIII | GTNAC | 6 cut(s) | 63, 149, 307, 583, 1474, 1498 |
| MalI | GATC | 6 cut(s) | 136, 169, 534, 630, 1209, 1356 |
| MbiI | CCGCTC | 2 cut(s) | 55, 1444 |
| MboI | GATC | 6 cut(s) | 134, 167, 532, 628, 1207, 1354 |
| MboII | GAAGA | 7 cut(s) | 280, 582, 628, 683, 709, 1088, 1406 |
| MhlI | GDGCHC | 6 cut(s) | 80, 161, 258, 525, 1189, 1311 |
| MlsI | TGGCCA | 2 cut(s) | 544, 1030 |
| MluCI | AATT | 9 cut(s) | 11, 337, 481, 555, 566, 578, 656, 1106, 1224 |
| MluNI | TGGCCA | 2 cut(s) | 544, 1030 |
| MlyI | GAGTC | 1 cut(s) | 71 |
| MmeI | TCCRAC | 1 cut(s) | 162 |
| Mox20I | TGGCCA | 2 cut(s) | 544, 1030 |
| MroI | TCCGGA | 1 cut(s) | 110 |
| MscI | TGGCCA | 2 cut(s) | 544, 1030 |
| MseI | TTAA | 7 cut(s) | 357, 456, 576, 1095, 1155, 1316, 1528 |
| Msp20I | TGGCCA | 2 cut(s) | 544, 1030 |
| MspA1I | CMGCKG | 2 cut(s) | 31, 85 |
| MspI | CCGG | 7 cut(s) | 97, 102, 111, 161, 206, 222, 1138 |
| MspR9I | CCNGG | 4 cut(s) | 97, 161, 206, 1172 |
| Mva1269I | GAATGC | 2 cut(s) | 1285, 1459 |
| MvaI | CCWGG | 1 cut(s) | 1172 |
| MvnI | CGCG | 3 cut(s) | 31, 70, 85 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 37, 183, 238, 294, 370, 431, 550, 611, 1184 |
| NciI | CCSGG | 3 cut(s) | 97, 161, 206 |
| NdeII | GATC | 6 cut(s) | 134, 167, 532, 628, 1207, 1354 |
| NlaIII | CATG | 7 cut(s) | 190, 529, 733, 1102, 1123, 1379, 1440 |
| NlaIV | GGNNCC | 7 cut(s) | 127, 159, 240, 984, 1125, 1187, 1298 |
| NmuCI | GTSAC | 2 cut(s) | 63, 583 |
| NsbI | TGCGCA | 1 cut(s) | 1284 |
| NspI | RCATGY | 1 cut(s) | 190 |
| PctI | GAATGC | 2 cut(s) | 1285, 1459 |
| PfeI | GAWTC | 3 cut(s) | 665, 904, 1246 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1478 |
| PfoI | TCCNGGA | 1 cut(s) | 95 |
| PkrI | GCNGC | 4 cut(s) | 57, 84, 1417, 1459 |
| PleI | GAGTC | 1 cut(s) | 70 |
| PpsI | GAGTC | 1 cut(s) | 70 |
| PshBI | ATTAAT | 1 cut(s) | 456 |
| PsiI | TTATAA | 1 cut(s) | 1007 |
| Psp1406I | AACGTT | 1 cut(s) | 311 |
| Psp6I | CCWGG | 1 cut(s) | 1170 |
| PspEI | GGTNACC | 1 cut(s) | 1498 |
| PspGI | CCWGG | 1 cut(s) | 1170 |
| PspN4I | GGNNCC | 7 cut(s) | 127, 159, 240, 984, 1125, 1187, 1298 |
| PspOMI | GGGCCC | 2 cut(s) | 157, 1185 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1144, 1176 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1478 |
| Rsr2I | CGGWCCG | 2 cut(s) | 99, 104 |
| RsrII | CGGWCCG | 2 cut(s) | 99, 104 |
| SacII | CCGCGG | 2 cut(s) | 32, 86 |
| SaqAI | TTAA | 7 cut(s) | 357, 456, 576, 1095, 1155, 1316, 1528 |
| SatI | GCNGC | 4 cut(s) | 56, 83, 1416, 1458 |
| Sau3AI | GATC | 6 cut(s) | 134, 167, 532, 628, 1207, 1354 |
| SchI | GAGTC | 1 cut(s) | 71 |
| ScrFI | CCNGG | 4 cut(s) | 97, 161, 206, 1172 |
| SduI | GDGCHC | 6 cut(s) | 80, 161, 258, 525, 1189, 1311 |
| SfaNI | GCATC | 3 cut(s) | 404, 592, 1136 |
| SfcI | CTRYAG | 4 cut(s) | 342, 439, 775, 1466 |
| Sfr303I | CCGCGG | 2 cut(s) | 32, 86 |
| SgrBI | CCGCGG | 2 cut(s) | 32, 86 |
| SinI | GGWCC | 4 cut(s) | 87, 99, 104, 1123 |
| SmlI | CTYRAG | 1 cut(s) | 5 |
| SmoI | CTYRAG | 1 cut(s) | 5 |
| Sse9I | AATT | 9 cut(s) | 11, 337, 481, 555, 566, 578, 656, 1106, 1224 |
| SspMI | CTAG | 3 cut(s) | 678, 1461, 1508 |
| StyD4I | CCNGG | 4 cut(s) | 95, 159, 204, 1170 |
| StyI | CCWWGG | 2 cut(s) | 677, 1269 |
| TaaI | ACNGT | 5 cut(s) | 108, 143, 692, 1160, 1238 |
| TaiI | ACGT | 2 cut(s) | 255, 314 |
| TaqI | TCGA | 4 cut(s) | 133, 166, 228, 404 |
| TasI | AATT | 9 cut(s) | 11, 337, 481, 555, 566, 578, 656, 1106, 1224 |
| TauI | GCSGC | 2 cut(s) | 58, 85 |
| TfiI | GAWTC | 3 cut(s) | 665, 904, 1246 |
| Tru1I | TTAA | 7 cut(s) | 357, 456, 576, 1095, 1155, 1316, 1528 |
| Tru9I | TTAA | 7 cut(s) | 357, 456, 576, 1095, 1155, 1316, 1528 |
| TscAI | CASTG | 2 cut(s) | 1298, 1311 |
| TseFI | GTSAC | 2 cut(s) | 63, 583 |
| TseI | GCWGC | 2 cut(s) | 1415, 1457 |
| Tsp45I | GTSAC | 2 cut(s) | 63, 583 |
| TspDTI | ATGAA | 4 cut(s) | 287, 579, 718, 725 |
| TspRI | CASTG | 2 cut(s) | 1298, 1311 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1478 |
| VpaK11BI | GGWCC | 4 cut(s) | 87, 99, 104, 1123 |
| VspI | ATTAAT | 1 cut(s) | 456 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1273 |
| XapI | RAATTY | 3 cut(s) | 337, 578, 1106 |
| XceI | RCATGY | 1 cut(s) | 190 |
| XmaJI | CCTAGG | 1 cut(s) | 677 |
| XmiI | GTMKAC | 1 cut(s) | 1465 |
| XspI | CTAG | 3 cut(s) | 678, 1461, 1508 |