RchiOBHm_Chr2g0089791

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0001510
Physical Location & Seq
Reverse (-)
3854343 .. 3858215
3873 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46509

Sequence Viewer

Length: 1527 bp
ATGTTCATTGACTCCACCATGCTTAAGCAAATTCTGAGCAAATTCCCTCGCAAGCCAAAATCAGAGTCACTAGATTCCACCGGGAGTGATTCTGGCAACAATAGTCCCAATTTGGGCAGTGGTTTCCAATGTACAATTGGTGGGAGTTCTCTTACAAGCAAATTAAATGTTGTCAAACGAGTGTCTTCAGCTGTTTTCCCAGCAAGCATTTCAGCTGGAGCAGAGGTAGTGGAGCCTCATCTGTCTTTCAAAGAGGTTTCAAATCCACAGAAGCAGAATCTGTTTATCAGTAAGTTGAATGTTTGCTGCGAGATCATTGATTCTAGCGATCCAGCTAAGCAAGATCTTAAGCGTGAAACGTTGATTGAACTTGTTGATTTTGTTTCTTCTGGATCTGCAAAGTTTAATGAACCAGCAATATCTGCAATGTGTAAAATGTGTGCAACCAACCTGTTTAGAGTTTTCCCACCTAAGTACCGATCTAATTTTACTGGTGGTGAAACCGAAGATGAAGAACCAATGTTTGATCCTGCTTGGTCACATCTGCAAATTGTGTATGATCTACTGGTTCGGTTTATCAGTTACAATTCGCTTGACATAAAGGTGGCGAAAAAGCATGTAGATCATTCTTTTATCGTACGATTACTTGACCTCTTTGATTCCGAGGACCCAAGAGAAAGAGACTGCTTGAAAACTATTCTGCATAGGATCTATGGAAAATTCATGGTGCATAGACCTTTTATACGAAAAGCTGTCAGCAATATCATCTATCGTTTTGTTTTTGAAACTGAAAGGCATAATGGTATGTCTGAGCTGTTGGAGATTTTTGGAAGTGTAATTAGCGGGTTTGCTTTGCCATTGAAGGAGGAGCACAAGATATTTTTGTGGAGGGCTCTGATTCCTCTACACAAACCAAAATCAGTGGGAATTTATCATCAGCAATTGACATATTGCGTTGTACAGTTTATAGAGAAGGACCCGAAGTTGGCTAGCACTGTTATAAAGGGATTGTTGAAGTACTGGCCAGTAACAAATAGCCAGAAGGAGTTGATGTTTCTAAGTGAGTTAGAAGAGGTTTTGGAAATGACTAGTATGGACGAGTTCCAAAAGATCATGGTCCCTTTGTTCCGAAGAATTAGATGCTGCCTCAATAGTTCCCATTACCAGGTGGCTGAGCGAGCTCACTTGCTATGGAACAATGAGCACATCCTTAACCTTATCGGGCATAACCGCCAGGTGATTTTGCCACTTGTCTTCCCAGCTATTGAGCGAAACACCCAAAACCACTGGAATCAAGCGGTGCTCAACCTGACAATGAATGTGAGGAAGATGTTTTGCGAGATGGATGAGGAGCTGGTACTTGCCTGCCAATGTAAGTTGGAGGAGGAACATATAAAGTCAAATTCTGCAGCCGAGAAGCGAAGGTTAACATGGGAACGCTTGGAAACTGCTGCTGGCGTTCAACCTGTTGTAGCTTGTAACTTTGTAGCTCCCATCAAGCCTTCCACTTGTCCTGTTGTCTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03015 ko04071 ko04113 ko04114 ko04151 ko04152 ko04261 ko04728 ko05165 map03015 map04071 map04113 map04114 map04151 map04152 map04261 map04728 map05165
Pfam Domains
Protein Families
B56

Protein Analysis

508

Amino Acids

57.93

Weight (kDa)

7.86

Isoelectric Point (pI)

47.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B56 PF01603 82 - 485 2.4e-172 Protein phosphatase 2A regulatory B subunit (B56 family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1001
AciI CCGC 3 cut(s) 843, 1231, 1298
AclI AACGTT 1 cut(s) 359
AclWI GGATC 4 cut(s) 323, 400, 521, 716
AcoI YGGCCR 1 cut(s) 1022
AcsI RAATTY 5 cut(s) 30, 41, 719, 927, 1402
AcuI CTGAAG 1 cut(s) 171
AfaI GTAC 6 cut(s) 133, 476, 639, 960, 1019, 1359
AfiI CCNNNNNNNGG 3 cut(s) 113, 985, 1165
AflII CTTAAG 2 cut(s) 23, 347
AgsI TTSAA 9 cut(s) 250, 261, 298, 368, 691, 785, 862, 1015, 1463
AhlI ACTAGT 1 cut(s) 1088
AjnI CCWGG 2 cut(s) 1164, 1233
Alw21I GWGCWC 4 cut(s) 873, 1183, 1206, 1305
Alw26I GTCTC 1 cut(s) 675
AlwI GGATC 4 cut(s) 323, 400, 521, 716
AlwNI CAGNNNCTG 1 cut(s) 280
AoxI GGCC 1 cut(s) 1022
ApeKI GCWGC 4 cut(s) 306, 1143, 1409, 1451
ApoI RAATTY 5 cut(s) 30, 41, 719, 927, 1402
ArsI GACNNNNNNTTYG 2 cut(s) 50, 82
AspS9I GGNCC 3 cut(s) 667, 976, 1117
AsuC2I CCSGG 1 cut(s) 82
AsuHPI GGTGA 2 cut(s) 509, 1249
AsuNHI GCTAGC 1 cut(s) 989
AvaII GGWCC 3 cut(s) 667, 976, 1117
BaeI ACNNNNGTAYC 2 cut(s) 458, 491
BalI TGGCCA 1 cut(s) 1024
BanII GRGCYC 2 cut(s) 895, 1183
BbsI GAAGAC 2 cut(s) 177, 1246
Bbv12I GWGCWC 4 cut(s) 873, 1183, 1206, 1305
BbvI GCAGC 4 cut(s) 293, 1130, 1421, 1438
BccI CCATC 2 cut(s) 1336, 1502
BciT130I CCWGG 2 cut(s) 1166, 1235
BcnI CCSGG 1 cut(s) 82
BcoDI GTCTC 1 cut(s) 675
BcuI ACTAGT 1 cut(s) 1088
BfaI CTAG 4 cut(s) 71, 324, 990, 1089
BfmI CTRYAG 1 cut(s) 1407
BfrI CTTAAG 2 cut(s) 23, 347
BglII AGATCT 1 cut(s) 343
BisI GCNGC 4 cut(s) 307, 1144, 1410, 1452
BlpI GCTNAGC 2 cut(s) 336, 1173
BlsI GCNGC 4 cut(s) 308, 1145, 1411, 1453
BmcAI AGTACT 1 cut(s) 1019
Bme1390I CCNGG 3 cut(s) 82, 1166, 1235
Bme18I GGWCC 3 cut(s) 667, 976, 1117
BmgT120I GGNCC 3 cut(s) 667, 976, 1117
BmiI GGNNCC 4 cut(s) 234, 669, 978, 1119
BmrFI CCNGG 3 cut(s) 82, 1166, 1235
BmsI GCATC 1 cut(s) 1130
BmtI GCTAGC 1 cut(s) 993
BpiI GAAGAC 2 cut(s) 177, 1246
BpmI CTGGAG 1 cut(s) 237
Bpu1102I GCTNAGC 2 cut(s) 336, 1173
BpuMI CCSGG 1 cut(s) 82
BsaJI CCNNGG 1 cut(s) 663
BsaXI ACNNNNNCTCC 4 cut(s) 210, 240, 1037, 1067
Bsc4I CCNNNNNNNGG 3 cut(s) 113, 985, 1165
Bse1I ACTGG 5 cut(s) 496, 570, 1025, 1025, 1292
Bse3DI GCAATG 1 cut(s) 432
BseBI CCWGG 2 cut(s) 1166, 1235
BseDI CCNNGG 1 cut(s) 663
BseGI GGATG 2 cut(s) 1206, 1351
BseLI CCNNNNNNNGG 3 cut(s) 113, 985, 1165
BseMI GCAATG 1 cut(s) 432
BseMII CTCAG 3 cut(s) 26, 801, 1164
BseNI ACTGG 5 cut(s) 496, 570, 1025, 1025, 1292
BseRI GAGGAG 3 cut(s) 881, 1364, 1397
BseXI GCAGC 4 cut(s) 293, 1130, 1421, 1438
BseYI CCCAGC 2 cut(s) 199, 1258
BshFI GGCC 1 cut(s) 1024
BsiHKAI GWGCWC 4 cut(s) 873, 1183, 1206, 1305
BsiSI CCGG 1 cut(s) 81
BsiWI CGTACG 1 cut(s) 637
BslFI GGGAC 2 cut(s) 90, 1103
BslI CCNNNNNNNGG 3 cut(s) 113, 985, 1165
BsmAI GTCTC 1 cut(s) 675
BsmFI GGGAC 2 cut(s) 90, 1103
BsnI GGCC 1 cut(s) 1024
Bsp1286I GDGCHC 5 cut(s) 873, 895, 1183, 1206, 1305
Bsp1407I TGTACA 2 cut(s) 131, 958
Bsp1720I GCTNAGC 2 cut(s) 336, 1173
BspACI CCGC 3 cut(s) 843, 1231, 1298
BspANI GGCC 1 cut(s) 1024
BspCNI CTCAG 3 cut(s) 27, 802, 1165
BspLI GGNNCC 4 cut(s) 234, 669, 978, 1119
BspMAI CTGCAG 1 cut(s) 1411
BspOI GCTAGC 1 cut(s) 993
BspPI GGATC 4 cut(s) 323, 400, 521, 716
BspTI CTTAAG 2 cut(s) 23, 347
BsrDI GCAATG 1 cut(s) 432
BsrGI TGTACA 2 cut(s) 131, 958
BsrI ACTGG 5 cut(s) 496, 570, 1025, 1025, 1292
BssECI CCNNGG 1 cut(s) 663
Bst2UI CCWGG 2 cut(s) 1166, 1235
Bst4CI ACNGT 2 cut(s) 963, 997
Bst6I CTCTTC 1 cut(s) 1065
BstAFI CTTAAG 2 cut(s) 23, 347
BstAPI GCANNNNNTGC 1 cut(s) 422
BstAUI TGTACA 2 cut(s) 131, 958
BstC8I GCNNGC 6 cut(s) 53, 205, 991, 1179, 1366, 1456
BstDEI CTNAG 6 cut(s) 35, 336, 471, 810, 1058, 1173
BstF5I GGATG 2 cut(s) 1206, 1351
BstMAI GTCTC 1 cut(s) 675
BstMWI GCNNNNNNNGC 2 cut(s) 422, 1178
BstNI CCWGG 2 cut(s) 1166, 1235
BstNSI RCATGY 1 cut(s) 620
BstSCI CCNGG 3 cut(s) 80, 1164, 1233
BstSFI CTRYAG 1 cut(s) 1407
BstV1I GCAGC 4 cut(s) 293, 1130, 1421, 1438
BstV2I GAAGAC 2 cut(s) 177, 1246
BstX2I RGATCY 3 cut(s) 343, 392, 708
BstYI RGATCY 3 cut(s) 343, 392, 708
BsuRI GGCC 1 cut(s) 1024
BtsCI GGATG 2 cut(s) 1206, 1351
BtsI GCAGTG 1 cut(s) 124
BtsIMutI CAGTG 4 cut(s) 124, 927, 993, 1285
Cac8I GCNNGC 6 cut(s) 53, 205, 991, 1179, 1366, 1456
CaiI CAGNNNCTG 1 cut(s) 280
Cfr13I GGNCC 3 cut(s) 667, 976, 1117
CsiI ACCWGGT 1 cut(s) 1164
Csp6I GTAC 6 cut(s) 132, 475, 638, 959, 1018, 1358
CspCI CAANNNNNGTGG 2 cut(s) 903, 938
CviAII CATG 5 cut(s) 19, 617, 724, 1114, 1431
CviQI GTAC 6 cut(s) 132, 475, 638, 959, 1018, 1358
DdeI CTNAG 6 cut(s) 35, 336, 471, 810, 1058, 1173
EaeI YGGCCR 1 cut(s) 1022
Eam1104I CTCTTC 1 cut(s) 1065
EarI CTCTTC 1 cut(s) 1065
Ecl136II GAGCTC 1 cut(s) 1181
Eco24I GRGCYC 2 cut(s) 895, 1183
Eco47I GGWCC 3 cut(s) 667, 976, 1117
Eco53kI GAGCTC 1 cut(s) 1181
Eco57I CTGAAG 1 cut(s) 171
EcoICRI GAGCTC 1 cut(s) 1181
EcoO109I RGGNCCY 2 cut(s) 667, 976
EcoRII CCWGG 2 cut(s) 1164, 1233
EcoT38I GRGCYC 2 cut(s) 895, 1183
FaeI CATG 5 cut(s) 22, 620, 727, 1117, 1434
FaqI GGGAC 2 cut(s) 90, 1103
FatI CATG 5 cut(s) 18, 616, 723, 1113, 1430
FauI CCCGC 1 cut(s) 836
Fnu4HI GCNGC 4 cut(s) 307, 1144, 1410, 1452
FokI GGATG 2 cut(s) 1193, 1358
FriOI GRGCYC 2 cut(s) 895, 1183
Fsp4HI GCNGC 4 cut(s) 307, 1144, 1410, 1452
FspBI CTAG 4 cut(s) 71, 324, 990, 1089
GluI GCNGC 4 cut(s) 307, 1144, 1410, 1452
GsaI CCCAGC 2 cut(s) 203, 1262
GsuI CTGGAG 1 cut(s) 237
HaeIII GGCC 1 cut(s) 1024
HapII CCGG 1 cut(s) 81
Hin1II CATG 5 cut(s) 22, 620, 727, 1117, 1434
HincII GTYRAC 1 cut(s) 1428
HindII GTYRAC 1 cut(s) 1428
HinfI GANTC 9 cut(s) 11, 65, 74, 89, 277, 320, 659, 898, 1291
HpaI GTTAAC 1 cut(s) 1428
HpaII CCGG 1 cut(s) 81
HphI GGTGA 2 cut(s) 509, 1249
Hpy166II GTNNAC 1 cut(s) 1428
Hpy188I TCNGA 6 cut(s) 36, 64, 664, 811, 897, 1130
Hpy188III TCNNGA 1 cut(s) 390
Hpy8I GTNNAC 1 cut(s) 1428
HpyAV CCTTC 5 cut(s) 856, 967, 1036, 1416, 1512
HpyCH4III ACNGT 2 cut(s) 963, 997
HpyCH4IV ACGT 1 cut(s) 359
HpyCH4V TGCA 7 cut(s) 398, 425, 443, 547, 703, 730, 1409
HpyF10VI GCNNNNNNNGC 2 cut(s) 422, 1178
HpyF3I CTNAG 6 cut(s) 35, 336, 471, 810, 1058, 1173
HpySE526I ACGT 1 cut(s) 359
Hsp92II CATG 5 cut(s) 22, 620, 727, 1117, 1434
KspAI GTTAAC 1 cut(s) 1428
LmnI GCTCC 5 cut(s) 218, 232, 868, 1351, 1495
Lsp1109I GCAGC 4 cut(s) 293, 1130, 1421, 1438
LweI GCATC 1 cut(s) 1130
MabI ACCWGGT 1 cut(s) 1164
MaeI CTAG 4 cut(s) 71, 324, 990, 1089
MaeII ACGT 1 cut(s) 359
MaeIII GTNAC 5 cut(s) 66, 537, 581, 1027, 1478
MboII GAAGA 8 cut(s) 177, 378, 518, 524, 1082, 1143, 1246, 1339
MfeI CAATTG 2 cut(s) 135, 941
MflI RGATCY 3 cut(s) 343, 392, 708
MhlI GDGCHC 5 cut(s) 873, 895, 1183, 1206, 1305
MlsI TGGCCA 1 cut(s) 1024
MluNI TGGCCA 1 cut(s) 1024
MlyI GAGTC 2 cut(s) 5, 74
MmeI TCCRAC 2 cut(s) 798, 1359
Mox20I TGGCCA 1 cut(s) 1024
MscI TGGCCA 1 cut(s) 1024
MseI TTAA 6 cut(s) 24, 164, 348, 405, 1212, 1427
MslI CAYNNNNRTG 1 cut(s) 602
Msp20I TGGCCA 1 cut(s) 1024
MspA1I CMGCKG 2 cut(s) 191, 215
MspCI CTTAAG 2 cut(s) 23, 347
MspI CCGG 1 cut(s) 81
MspR9I CCNGG 3 cut(s) 82, 1166, 1235
MunI CAATTG 2 cut(s) 135, 941
MvaI CCWGG 2 cut(s) 1166, 1235
MwoI GCNNNNNNNGC 2 cut(s) 422, 1178
NciI CCSGG 1 cut(s) 82
NheI GCTAGC 1 cut(s) 989
NlaIII CATG 5 cut(s) 22, 620, 727, 1117, 1434
NlaIV GGNNCC 4 cut(s) 234, 669, 978, 1119
NmeAIII GCCGAG 1 cut(s) 1438
NmuCI GTSAC 2 cut(s) 66, 537
NspI RCATGY 1 cut(s) 620
PfeI GAWTC 7 cut(s) 74, 89, 277, 320, 659, 898, 1291
Pfl23II CGTACG 1 cut(s) 637
PkrI GCNGC 4 cut(s) 308, 1145, 1411, 1453
PleI GAGTC 2 cut(s) 5, 73
PpsI GAGTC 2 cut(s) 5, 73
PpuMI RGGWCCY 2 cut(s) 667, 976
PsiI TTATAA 1 cut(s) 1001
Psp124BI GAGCTC 1 cut(s) 1183
Psp1406I AACGTT 1 cut(s) 359
Psp5II RGGWCCY 2 cut(s) 667, 976
Psp6I CCWGG 2 cut(s) 1164, 1233
PspFI CCCAGC 2 cut(s) 199, 1258
PspGI CCWGG 2 cut(s) 1164, 1233
PspLI CGTACG 1 cut(s) 637
PspN4I GGNNCC 4 cut(s) 234, 669, 978, 1119
PspPI GGNCC 3 cut(s) 667, 976, 1117
PspPPI RGGWCCY 2 cut(s) 667, 976
PstI CTGCAG 1 cut(s) 1411
PstNI CAGNNNCTG 1 cut(s) 280
PsuI RGATCY 3 cut(s) 343, 392, 708
PvuII CAGCTG 2 cut(s) 191, 215
RsaI GTAC 6 cut(s) 133, 476, 639, 960, 1019, 1359
RsaNI GTAC 6 cut(s) 132, 475, 638, 959, 1018, 1358
RseI CAYNNNNRTG 1 cut(s) 602
SacI GAGCTC 1 cut(s) 1183
SaqAI TTAA 6 cut(s) 24, 164, 348, 405, 1212, 1427
SatI GCNGC 4 cut(s) 307, 1144, 1410, 1452
Sau96I GGNCC 3 cut(s) 667, 976, 1117
ScaI AGTACT 1 cut(s) 1019
SchI GAGTC 2 cut(s) 5, 74
ScrFI CCNGG 3 cut(s) 82, 1166, 1235
SduI GDGCHC 5 cut(s) 873, 895, 1183, 1206, 1305
SexAI ACCWGGT 1 cut(s) 1164
SfaNI GCATC 1 cut(s) 1130
SfcI CTRYAG 1 cut(s) 1407
SinI GGWCC 3 cut(s) 667, 976, 1117
SmiMI CAYNNNNRTG 1 cut(s) 602
SmlI CTYRAG 2 cut(s) 23, 347
SmoI CTYRAG 2 cut(s) 23, 347
SpeI ACTAGT 1 cut(s) 1088
SsiI CCGC 3 cut(s) 843, 1231, 1298
SspMI CTAG 4 cut(s) 71, 324, 990, 1089
SstI GAGCTC 1 cut(s) 1183
StyD4I CCNGG 3 cut(s) 80, 1164, 1233
TaaI ACNGT 2 cut(s) 963, 997
TaiI ACGT 1 cut(s) 362
TatI WGTACW 3 cut(s) 131, 958, 1017
TfiI GAWTC 7 cut(s) 74, 89, 277, 320, 659, 898, 1291
Tru1I TTAA 6 cut(s) 24, 164, 348, 405, 1212, 1427
Tru9I TTAA 6 cut(s) 24, 164, 348, 405, 1212, 1427
TscAI CASTG 4 cut(s) 124, 927, 1000, 1292
TseFI GTSAC 2 cut(s) 66, 537
TseI GCWGC 4 cut(s) 306, 1143, 1409, 1451
Tsp45I GTSAC 2 cut(s) 66, 537
TspDTI ATGAA 4 cut(s) 423, 525, 712, 1331
TspRI CASTG 4 cut(s) 124, 927, 1000, 1292
Vha464I CTTAAG 2 cut(s) 23, 347
VpaK11BI GGWCC 3 cut(s) 667, 976, 1117
XapI RAATTY 5 cut(s) 30, 41, 719, 927, 1402
XceI RCATGY 1 cut(s) 620
XcmI CCANNNNNNNNNTGG 1 cut(s) 134
XspI CTAG 4 cut(s) 71, 324, 990, 1089
ZrmI AGTACT 1 cut(s) 1019
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.