Rroxscaffold_7G00156470

The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
304750 .. 307489
2740 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00156470.1

Sequence Viewer

Length: 1347 bp
ATGTCCTCGGCGGTGTTCCCGGCGAGCGTGGTGGCCGGAATCGAGCCCTTGGTGCCCTTCAAGGACGTGCCGGGTTCCGAAAAGATGAACCTCTTCGTGAGCAAGGTGAGTCTTTGCTGTGTCACATTTGATTTCACAGACCCAACTAAGAATTCGATTGAGAAAGATGTGAAAAGACAGACATTGCTTGAACTTGTGGAATTTGTGTCATCTGCCTCCATGAAATTTAGTGAGCCTGCTATTCTGGCCACCTGTAGAATGTGTGCTATTAATTTGTTTAGAGTTTTCCCGCCTAATTATCGATCGAATTCGGGTGGGGGAGAGAATGAGGATGATGAGCCAACCTTTGATCCTGCCTGGCCACATTTGCAAATTGTGTATGAATTGCTGCTCAAGTTTGTTACTTCTTCGTGTTTGGATGCCAAAGTCGCAAAGAAGTATATAGACCATGCCTTCATTTTGAGATTGCTCGAGTTGTTTGATTCCGAGGACCCTAGGGAGAGGGACTGCTTGAAGACCATTCTGCATAGGATTTATGGCAAGTTCATGGTTCATAGGCCGTTTATTCGCAAGTCGATCAACAACATATTTTACAAGTTTTTGTTTGAGACTGAGAGACATAATGGGATTGCCGAGCTTCTGGAGATATTTGGGAGTATCATTAGTGGGTTTGCATTGCCGTTGAAAGAGGAGCACAGGATATTCTTGTGGAGGGTTTTGATTCCCCTGCATAAGCCAAAGAATCTGGGGTCTTATTTTCAGCAGTTGTCATACTGTGTCACGCAGTTTATAGAGAAGGAGCCAAAGTTGGCAAGTGTTGTTATAAAGGGTTTGTTGAAATACTGGCCGATAACAAGTAGTCAGAAAGAGGTGATGTTCTTGGGTGAGTTGGAAGAGATTTTGGAGGCAGTTAACATGGTGGAATTTCAAAAGGTTATGGTCCCTTTGTTCTGCCGGATCGCATCTTGCATTAACAGTTTCCACTTCCAGGTGTCTGAAAGAGCGCTCTTCTTTTGGAACAATGACCACATTGTCAACTTAATTGCACATAATCGTCAAGTCATTCTGCCCATCATTTTACCAGCCTTGGAGAAGAATGCCAATAACCACTGGAACCAAGCAGTACTCAACTTAACTCTTAATGTTAGAAAGATGTTTGTGGAGATGGATGATCAGCTCTTCCTCTCCATCCATGCCCAATATATGGAAGAAGAAGCAAATCAAGGCTCGGAAGCTAAGAAGCGGAAGGAAGCATGGGAACGGTTAGAGAATGCAGCTAGTCTCCAGCCGGTAACTGGAAATACTGCTGTTTTGGTAACTCCTCTGGCAACTTCAATTGCCTGCTGA

Protein Analysis

448

Amino Acids

51.29

Weight (kDa)

6.34

Isoelectric Point (pI)

45.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B56 PF01603 18 - 426 3.9e-183 Protein phosphatase 2A regulatory B subunit (B56 family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 824
AasI GACNNNNNNGTC 1 cut(s) 1031
AccB1I GGYRCC 1 cut(s) 52
AccB7I CCANNNNNTGG 1 cut(s) 1204
AciI CCGC 3 cut(s) 11, 290, 1243
AclWI GGATC 2 cut(s) 344, 965
AcoI YGGCCR 4 cut(s) 33, 246, 359, 845
AcsI RAATTY 5 cut(s) 151, 200, 224, 307, 923
AfaI GTAC 1 cut(s) 1125
AfeI AGCGCT 1 cut(s) 1005
AfiI CCNNNNNNNGG 3 cut(s) 988, 1204, 1295
AgsI TTSAA 7 cut(s) 61, 191, 514, 685, 838, 929, 1335
AjiI CACGTC 1 cut(s) 67
AjnI CCWGG 2 cut(s) 356, 987
AjuI GAANNNNNNNTTGG 2 cut(s) 136, 168
AluBI AGCT 4 cut(s) 637, 1177, 1235, 1277
AluI AGCT 4 cut(s) 637, 1177, 1235, 1277
Alw21I GWGCWC 1 cut(s) 696
Alw26I GTCTC 3 cut(s) 602, 610, 1286
AlwI GGATC 2 cut(s) 344, 965
Ama87I CYCGRG 1 cut(s) 470
Aor51HI AGCGCT 1 cut(s) 1005
AoxI GGCC 5 cut(s) 33, 246, 359, 557, 845
ApeKI GCWGC 2 cut(s) 388, 1274
ApoI RAATTY 5 cut(s) 151, 200, 224, 307, 923
AseI ATTAAT 1 cut(s) 270
Asp700I GAANNNNTTC 1 cut(s) 92
AspA2I CCTAGG 1 cut(s) 494
AspLEI GCGC 1 cut(s) 1006
AspS9I GGNCC 2 cut(s) 490, 940
AsuC2I CCSGG 2 cut(s) 20, 72
AsuHPI GGTGA 3 cut(s) 118, 883, 896
AvaI CYCGRG 1 cut(s) 470
AvaII GGWCC 2 cut(s) 490, 940
AvrII CCTAGG 1 cut(s) 494
BaeGI GKGCMC 1 cut(s) 57
BalI TGGCCA 2 cut(s) 248, 361
BanI GGYRCC 1 cut(s) 52
BanII GRGCYC 1 cut(s) 48
BbsI GAAGAC 1 cut(s) 521
Bbv12I GWGCWC 1 cut(s) 696
BbvI GCAGC 2 cut(s) 375, 1286
BccI CCATC 3 cut(s) 1079, 1159, 1196
BceAI ACGGC 2 cut(s) 544, 664
BciT130I CCWGG 2 cut(s) 358, 989
BclI TGATCA 1 cut(s) 1171
BcnI CCSGG 2 cut(s) 20, 72
BcoDI GTCTC 3 cut(s) 602, 610, 1286
BfaI CTAG 2 cut(s) 495, 1278
BfmI CTRYAG 1 cut(s) 253
BfoI RGCGCY 1 cut(s) 1007
BisI GCNGC 2 cut(s) 389, 1275
BlnI CCTAGG 1 cut(s) 494
BlsI GCNGC 2 cut(s) 390, 1276
BmcAI AGTACT 1 cut(s) 1125
Bme1390I CCNGG 4 cut(s) 20, 72, 358, 989
Bme18I GGWCC 2 cut(s) 490, 940
BmeT110I CYCGRG 1 cut(s) 470
BmgBI CACGTC 1 cut(s) 67
BmgT120I GGNCC 2 cut(s) 490, 940
BmiI GGNNCC 6 cut(s) 54, 76, 492, 801, 942, 1115
BmrFI CCNGG 4 cut(s) 20, 72, 358, 989
BmsI GCATC 2 cut(s) 409, 971
BpiI GAAGAC 1 cut(s) 521
BpmI CTGGAG 2 cut(s) 662, 1268
BpuEI CTTGAG 1 cut(s) 377
BpuMI CCSGG 2 cut(s) 20, 72
Bsa29I ATCGAT 1 cut(s) 301
BsaJI CCNNGG 5 cut(s) 6, 48, 486, 494, 1086
BsaXI ACNNNNNCTCC 2 cut(s) 791, 821
Bsc4I CCNNNNNNNGG 3 cut(s) 988, 1204, 1295
Bse118I RCCGGY 1 cut(s) 1288
Bse1I ACTGG 3 cut(s) 848, 1115, 1300
Bse3DI GCAATG 2 cut(s) 182, 674
BseBI CCWGG 2 cut(s) 358, 989
BseCI ATCGAT 1 cut(s) 301
BseDI CCNNGG 5 cut(s) 6, 48, 486, 494, 1086
BseGI GGATG 4 cut(s) 337, 424, 1174, 1188
BseLI CCNNNNNNNGG 3 cut(s) 988, 1204, 1295
BseMI GCAATG 2 cut(s) 182, 674
BseMII CTCAG 1 cut(s) 603
BseNI ACTGG 3 cut(s) 848, 1115, 1300
BseRI GAGGAG 2 cut(s) 704, 1311
BseSI GKGCMC 1 cut(s) 57
BseXI GCAGC 2 cut(s) 375, 1286
Bsh1285I CGRYCG 1 cut(s) 305
BshFI GGCC 5 cut(s) 35, 248, 361, 559, 847
BshNI GGYRCC 1 cut(s) 52
BshVI ATCGAT 1 cut(s) 301
BsiEI CGRYCG 1 cut(s) 305
BsiHKAI GWGCWC 1 cut(s) 696
BsiHKCI CYCGRG 1 cut(s) 470
BsiSI CCGG 5 cut(s) 20, 36, 71, 955, 1289
BslFI GGGAC 2 cut(s) 518, 926
BslI CCNNNNNNNGG 3 cut(s) 988, 1204, 1295
BsmAI GTCTC 3 cut(s) 602, 610, 1286
BsmFI GGGAC 2 cut(s) 518, 926
BsmI GAATGC 2 cut(s) 1102, 1276
BsnI GGCC 5 cut(s) 35, 248, 361, 559, 847
BsoBI CYCGRG 1 cut(s) 470
Bsp1286I GDGCHC 3 cut(s) 48, 57, 696
Bsp143I GATC 5 cut(s) 302, 349, 576, 957, 1171
BspACI CCGC 3 cut(s) 11, 290, 1243
BspANI GGCC 5 cut(s) 35, 248, 361, 559, 847
BspCNI CTCAG 1 cut(s) 604
BspDI ATCGAT 1 cut(s) 301
BspLI GGNNCC 6 cut(s) 54, 76, 492, 801, 942, 1115
BspPI GGATC 2 cut(s) 344, 965
BspQI GCTCTTC 2 cut(s) 1013, 1184
BspT107I GGYRCC 1 cut(s) 52
BsrDI GCAATG 2 cut(s) 182, 674
BsrFI RCCGGY 1 cut(s) 1288
BsrI ACTGG 3 cut(s) 848, 1115, 1300
BssAI RCCGGY 1 cut(s) 1288
BssECI CCNNGG 5 cut(s) 6, 48, 486, 494, 1086
BssMI GATC 5 cut(s) 302, 349, 576, 957, 1171
BssT1I CCWWGG 3 cut(s) 48, 494, 1086
Bst2UI CCWGG 2 cut(s) 358, 989
Bst4CI ACNGT 3 cut(s) 776, 977, 1263
Bst6I CTCTTC 4 cut(s) 98, 888, 1013, 1184
BstC8I GCNNGC 3 cut(s) 25, 237, 1342
BstDEI CTNAG 3 cut(s) 147, 612, 1236
BstF5I GGATG 4 cut(s) 337, 424, 1174, 1188
BstH2I RGCGCY 1 cut(s) 1007
BstHHI GCGC 1 cut(s) 1006
BstKTI GATC 5 cut(s) 305, 352, 579, 960, 1174
BstMAI GTCTC 3 cut(s) 602, 610, 1286
BstMBI GATC 5 cut(s) 302, 349, 576, 957, 1171
BstMCI CGRYCG 1 cut(s) 305
BstMWI GCNNNNNNNGC 4 cut(s) 52, 245, 367, 428
BstNI CCWGG 2 cut(s) 358, 989
BstSCI CCNGG 4 cut(s) 18, 70, 356, 987
BstSFI CTRYAG 1 cut(s) 253
BstSLI GKGCMC 1 cut(s) 57
BstV1I GCAGC 2 cut(s) 375, 1286
BstV2I GAAGAC 1 cut(s) 521
Bsu15I ATCGAT 1 cut(s) 301
BsuRI GGCC 5 cut(s) 35, 248, 361, 559, 847
BsuTUI ATCGAT 1 cut(s) 301
BtrI CACGTC 1 cut(s) 67
BtsCI GGATG 4 cut(s) 337, 424, 1174, 1188
BtsIMutI CAGTG 1 cut(s) 1108
Cac8I GCNNGC 3 cut(s) 25, 237, 1342
CfoI GCGC 1 cut(s) 1006
Cfr10I RCCGGY 1 cut(s) 1288
Cfr13I GGNCC 2 cut(s) 490, 940
ClaI ATCGAT 1 cut(s) 301
Csp6I GTAC 1 cut(s) 1124
CviAII CATG 6 cut(s) 220, 449, 547, 916, 1193, 1254
CviQI GTAC 1 cut(s) 1124
DdeI CTNAG 3 cut(s) 147, 612, 1236
DpnI GATC 5 cut(s) 304, 351, 578, 959, 1173
DpnII GATC 5 cut(s) 302, 349, 576, 957, 1171
DrdI GACNNNNNNGTC 1 cut(s) 1031
DseDI GACNNNNNNGTC 1 cut(s) 1031
EaeI YGGCCR 4 cut(s) 33, 246, 359, 845
Eam1104I CTCTTC 4 cut(s) 98, 888, 1013, 1184
EarI CTCTTC 4 cut(s) 98, 888, 1013, 1184
Eco130I CCWWGG 3 cut(s) 48, 494, 1086
Eco24I GRGCYC 1 cut(s) 48
Eco47I GGWCC 2 cut(s) 490, 940
Eco47III AGCGCT 1 cut(s) 1005
Eco88I CYCGRG 1 cut(s) 470
EcoO109I RGGNCCY 1 cut(s) 490
EcoRI GAATTC 2 cut(s) 151, 307
EcoRII CCWGG 2 cut(s) 356, 987
EcoT14I CCWWGG 3 cut(s) 48, 494, 1086
EcoT38I GRGCYC 1 cut(s) 48
ErhI CCWWGG 3 cut(s) 48, 494, 1086
FaeI CATG 6 cut(s) 223, 452, 550, 919, 1196, 1257
FaqI GGGAC 2 cut(s) 518, 926
FatI CATG 6 cut(s) 219, 448, 546, 915, 1192, 1253
FauI CCCGC 1 cut(s) 297
FbaI TGATCA 1 cut(s) 1171
Fnu4HI GCNGC 2 cut(s) 389, 1275
FokI GGATG 4 cut(s) 344, 431, 1175, 1181
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 2 cut(s) 389, 1275
FspBI CTAG 2 cut(s) 495, 1278
GlaI GCGC 1 cut(s) 1005
GluI GCNGC 2 cut(s) 389, 1275
GsuI CTGGAG 2 cut(s) 662, 1268
HaeII RGCGCY 1 cut(s) 1007
HaeIII GGCC 5 cut(s) 35, 248, 361, 559, 847
HapII CCGG 5 cut(s) 20, 36, 71, 955, 1289
HhaI GCGC 1 cut(s) 1006
Hin1II CATG 6 cut(s) 223, 452, 550, 919, 1196, 1257
Hin6I GCGC 1 cut(s) 1004
HinP1I GCGC 1 cut(s) 1004
HincII GTYRAC 2 cut(s) 913, 1036
HindII GTYRAC 2 cut(s) 913, 1036
HinfI GANTC 5 cut(s) 39, 109, 482, 721, 742
HpaI GTTAAC 1 cut(s) 913
HpaII CCGG 5 cut(s) 20, 36, 71, 955, 1289
HphI GGTGA 3 cut(s) 118, 883, 896
Hpy166II GTNNAC 2 cut(s) 913, 1036
Hpy188I TCNGA 5 cut(s) 79, 487, 864, 997, 1231
Hpy188III TCNNGA 2 cut(s) 97, 641
Hpy8I GTNNAC 2 cut(s) 913, 1036
HpyAV CCTTC 4 cut(s) 67, 463, 790, 1240
HpyCH4III ACNGT 3 cut(s) 776, 977, 1263
HpyCH4IV ACGT 1 cut(s) 66
HpyCH4V TGCA 7 cut(s) 370, 526, 674, 730, 969, 1046, 1274
HpyF10VI GCNNNNNNNGC 4 cut(s) 52, 245, 367, 428
HpyF3I CTNAG 3 cut(s) 147, 612, 1236
HpySE526I ACGT 1 cut(s) 66
Hsp92II CATG 6 cut(s) 223, 452, 550, 919, 1196, 1257
HspAI GCGC 1 cut(s) 1004
Ksp22I TGATCA 1 cut(s) 1171
KspAI GTTAAC 1 cut(s) 913
Kzo9I GATC 5 cut(s) 302, 349, 576, 957, 1171
LguI GCTCTTC 2 cut(s) 1013, 1184
LmnI GCTCC 2 cut(s) 691, 799
Lsp1109I GCAGC 2 cut(s) 375, 1286
LweI GCATC 2 cut(s) 409, 971
MaeI CTAG 2 cut(s) 495, 1278
MaeII ACGT 1 cut(s) 66
MaeIII GTNAC 5 cut(s) 121, 400, 778, 1291, 1315
MalI GATC 5 cut(s) 304, 351, 578, 959, 1173
MboI GATC 5 cut(s) 302, 349, 576, 957, 1171
MboII GAAGA 9 cut(s) 85, 399, 526, 905, 1000, 1105, 1171, 1220, 1223
MfeI CAATTG 1 cut(s) 1335
MhlI GDGCHC 3 cut(s) 48, 57, 696
MlsI TGGCCA 2 cut(s) 248, 361
MluNI TGGCCA 2 cut(s) 248, 361
MlyI GAGTC 1 cut(s) 118
MmeI TCCRAC 1 cut(s) 870
Mox20I TGGCCA 2 cut(s) 248, 361
MroXI GAANNNNTTC 1 cut(s) 92
MscI TGGCCA 2 cut(s) 248, 361
MseI TTAA 6 cut(s) 270, 912, 972, 1040, 1133, 1140
Msp20I TGGCCA 2 cut(s) 248, 361
MspI CCGG 5 cut(s) 20, 36, 71, 955, 1289
MspR9I CCNGG 4 cut(s) 20, 72, 358, 989
MunI CAATTG 1 cut(s) 1335
Mva1269I GAATGC 2 cut(s) 1102, 1276
MvaI CCWGG 2 cut(s) 358, 989
MwoI GCNNNNNNNGC 4 cut(s) 52, 245, 367, 428
NciI CCSGG 2 cut(s) 20, 72
NdeII GATC 5 cut(s) 302, 349, 576, 957, 1171
NlaIII CATG 6 cut(s) 223, 452, 550, 919, 1196, 1257
NlaIV GGNNCC 6 cut(s) 54, 76, 492, 801, 942, 1115
NmeAIII GCCGAG 1 cut(s) 658
NmuCI GTSAC 2 cut(s) 121, 778
PaeR7I CTCGAG 1 cut(s) 470
PciSI GCTCTTC 2 cut(s) 1013, 1184
PctI GAATGC 2 cut(s) 1102, 1276
PdmI GAANNNNTTC 1 cut(s) 92
PfeI GAWTC 4 cut(s) 39, 482, 721, 742
PflMI CCANNNNNTGG 1 cut(s) 1204
PkrI GCNGC 2 cut(s) 390, 1276
Ple19I CGATCG 1 cut(s) 305
PleI GAGTC 1 cut(s) 117
PpsI GAGTC 1 cut(s) 117
PpuMI RGGWCCY 1 cut(s) 490
PshBI ATTAAT 1 cut(s) 270
PsiI TTATAA 1 cut(s) 824
Psp5II RGGWCCY 1 cut(s) 490
Psp6I CCWGG 2 cut(s) 356, 987
PspGI CCWGG 2 cut(s) 356, 987
PspN4I GGNNCC 6 cut(s) 54, 76, 492, 801, 942, 1115
PspPI GGNCC 2 cut(s) 490, 940
PspPPI RGGWCCY 1 cut(s) 490
PspXI VCTCGAGB 1 cut(s) 470
PvuI CGATCG 1 cut(s) 305
RsaI GTAC 1 cut(s) 1125
RsaNI GTAC 1 cut(s) 1124
SapI GCTCTTC 2 cut(s) 1013, 1184
SaqAI TTAA 6 cut(s) 270, 912, 972, 1040, 1133, 1140
SatI GCNGC 2 cut(s) 389, 1275
Sau3AI GATC 5 cut(s) 302, 349, 576, 957, 1171
Sau96I GGNCC 2 cut(s) 490, 940
ScaI AGTACT 1 cut(s) 1125
SchI GAGTC 1 cut(s) 118
ScrFI CCNGG 4 cut(s) 20, 72, 358, 989
SduI GDGCHC 3 cut(s) 48, 57, 696
SfaNI GCATC 2 cut(s) 409, 971
SfcI CTRYAG 1 cut(s) 253
Sfr274I CTCGAG 1 cut(s) 470
SinI GGWCC 2 cut(s) 490, 940
SlaI CTCGAG 1 cut(s) 470
SmlI CTYRAG 2 cut(s) 392, 470
SmoI CTYRAG 2 cut(s) 392, 470
SsiI CCGC 3 cut(s) 11, 290, 1243
SspMI CTAG 2 cut(s) 495, 1278
StyD4I CCNGG 4 cut(s) 18, 70, 356, 987
StyI CCWWGG 3 cut(s) 48, 494, 1086
TaaI ACNGT 3 cut(s) 776, 977, 1263
TaiI ACGT 1 cut(s) 69
TaqI TCGA 6 cut(s) 42, 155, 301, 305, 471, 575
TatI WGTACW 1 cut(s) 1123
TfiI GAWTC 4 cut(s) 39, 482, 721, 742
Tru1I TTAA 6 cut(s) 270, 912, 972, 1040, 1133, 1140
Tru9I TTAA 6 cut(s) 270, 912, 972, 1040, 1133, 1140
TscAI CASTG 1 cut(s) 1115
TseFI GTSAC 2 cut(s) 121, 778
TseI GCWGC 2 cut(s) 388, 1274
Tsp45I GTSAC 2 cut(s) 121, 778
TspDTI ATGAA 6 cut(s) 101, 236, 396, 445, 535, 542
TspRI CASTG 1 cut(s) 1115
Van91I CCANNNNNTGG 1 cut(s) 1204
VpaK11BI GGWCC 2 cut(s) 490, 940
VspI ATTAAT 1 cut(s) 270
XapI RAATTY 5 cut(s) 151, 200, 224, 307, 923
XcmI CCANNNNNNNNNTGG 1 cut(s) 1292
XhoI CTCGAG 1 cut(s) 470
XmaJI CCTAGG 1 cut(s) 494
XmnI GAANNNNTTC 1 cut(s) 92
XspI CTAG 2 cut(s) 495, 1278
ZrmI AGTACT 1 cut(s) 1125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.