Prupe.2G012200_v2.0.a1

Belongs to the mitochondrial carrier (TC 2.A.29) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0001633
Physical Location & Seq
Forward (+)
1050786 .. 1054805
4020 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G012200.2

Sequence Viewer

Length: 1155 bp
ATGGTTGATCAGGTTCAACACCCTTCTGTTGTTCAGAAGGTAGCCGGCCAGCTCCTTCAGCAATCTATTCAGGGATACGATAGTGGCTTCCAAAGACCGGGGATGTACCAAAGGCGTGCATATGGGAACTACTCTAATGCTGCATTGCAGTATCCCTTTATGCCAGCATGCAGAGCTACAACTGATCTATCTTTGGTTCCATCAACTGCATCCCCAATCTTTGTCCAAGCCCCTGCAGAGAAAGGCCACTTTCTTATTGATTTTCTTATGGGTGGAGTCTCTGCTGCTGTATCTAAAACTGCTGCTGCTCCAATTGAGCGTGTTAAACTTTTGATTCAGAACCAGGATGAAATGATCAAAACTGGTCGGTTGTCTGAACCCTACAAGGGCATTGGTGACTGCTTTGGCAGGACAATCAAGGAAGAGGGGTTTGGTTCATTGTGGAGAGGGAACACTGCCAATGTCATCCGTTACTTCCCTACACAGGCCTTGAACTTTGCATTCAAGGATTACTTTAAGAGGCTATTCAACTTCAAGAAAGACAGGGATGGTTACTGGAAATGGTTCGCTGGTAACTTGGCATCAGGAGGTGCAGCTGGTGCTTCTTCCCTTCTCTTTGTGTACTCTTTGGATTATGCTCGTACCCGTTTGGCTAATGATGCTAAAGCTGCAAAGAAGGGAGGAGAAAGACAATTCAATGGTCTTGTTGATGTCTACAGGAAGACATTAAAATCTGATGGCCTTGCTGGTCTTTACCGTGGATTCAACATATCTTGTGTTGGTATTATTGTGTACCGTGGTCTCTACTTTGGATTGTATGATTCATTGAAGCCTGTGGTCCTGACTGGAGGTTTGCAGGATAGTTTCTTCGCCAGCTTTGCCCTTGGTTGGCTCATCACCAATGGTGCTGGTCTTGCTTCCTACCCAATTGACACTGTTCGCAGAAGAATGATGATGACCTCCGGTGAAGCTGTCAAGTACAAGAGCTCCCTGGATGCCTTCAAGCAGATCTTGAAGAATGAGGGTGCCAAGTCTCTCTTTAAGGGTGCTGGTGCCAACATCCTCCGTGCCATTGCTGGTGCTGGTGTCCTTTCTGGTTATGATAAGCTACAGCTGGTCGTGTTCGGGAAGAAGTATGGATCTGGTGGTGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000295 GO:0003674 GO:0005215 GO:0005346 GO:0005347 GO:0005471 GO:0005488 GO:0005507 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006839 GO:0006855 GO:0006862 GO:0006996 GO:0007005 GO:0007006 GO:0008150 GO:0008509 GO:0008514 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0015075 GO:0015215 GO:0015216 GO:0015217 GO:0015238 GO:0015291 GO:0015297 GO:0015301 GO:0015605 GO:0015711 GO:0015748 GO:0015865 GO:0015866 GO:0015867 GO:0015868 GO:0015893 GO:0015931 GO:0015932 GO:0016020 GO:0016021 GO:0016043 GO:0019866 GO:0022804 GO:0022857 GO:0030312 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0034220 GO:0042221 GO:0042493 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044429 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0046902 GO:0046914 GO:0050896 GO:0051179 GO:0051234 GO:0051503 GO:0055085 GO:0061024 GO:0065007 GO:0065008 GO:0070013 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0090559 GO:0098588 GO:0098656 GO:0098805 GO:0099516 GO:1901264 GO:1901505 GO:1901679
KEGG Pathways
Metabolic & Signaling
ko00514 ko04020 ko04022 ko04217 ko04218 ko05012 ko05016 ko05166 map00514 map04020 map04022 map04217 map04218 map05012 map05016 map05166
Pfam Domains
Protein Families
Mito_carr

Protein Analysis

385

Amino Acids

41.87

Weight (kDa)

9.77

Isoelectric Point (pI)

28.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 1025, 1052, 1148
AccI GTMKAC 1 cut(s) 714
AclWI GGATC 1 cut(s) 1147
AcoI YGGCCR 1 cut(s) 46
AcuI CTGAAG 1 cut(s) 41
AfaI GTAC 5 cut(s) 107, 623, 643, 794, 980
AfiI CCNNNNNNNGG 4 cut(s) 97, 386, 484, 888
AjnI CCWGG 2 cut(s) 342, 990
AjuI GAANNNNNNNTTGG 2 cut(s) 414, 446
AluBI AGCT 9 cut(s) 52, 176, 596, 668, 876, 971, 987, 1108, 1114
AluI AGCT 9 cut(s) 52, 176, 596, 668, 876, 971, 987, 1108, 1114
Alw21I GWGCWC 1 cut(s) 989
Alw26I GTCTC 3 cut(s) 283, 806, 1038
AlwI GGATC 1 cut(s) 1147
AoxI GGCC 4 cut(s) 46, 244, 486, 739
ApeKI GCWGC 6 cut(s) 140, 284, 302, 305, 593, 668
ArsI GACNNNNNNTTYG 2 cut(s) 835, 867
Asp700I GAANNNNTTC 1 cut(s) 563
AspS9I GGNCC 1 cut(s) 838
AsuC2I CCSGG 1 cut(s) 99
AsuHPI GGTGA 3 cut(s) 407, 889, 977
AvaII GGWCC 1 cut(s) 838
BaeI ACNNNNGTAYC 2 cut(s) 67, 100
BanI GGYRCC 3 cut(s) 1025, 1052, 1148
BanII GRGCYC 1 cut(s) 989
BbsI GAAGAC 1 cut(s) 728
Bbv12I GWGCWC 1 cut(s) 989
BbvI GCAGC 6 cut(s) 127, 271, 289, 292, 605, 655
BccI CCATC 3 cut(s) 208, 542, 731
BciT130I CCWGG 2 cut(s) 344, 992
BciVI GTATCC 2 cut(s) 68, 162
BclI TGATCA 2 cut(s) 7, 354
BcnI CCSGG 1 cut(s) 99
BcoDI GTCTC 3 cut(s) 283, 806, 1038
BfmI CTRYAG 3 cut(s) 234, 715, 1109
BfuI GTATCC 2 cut(s) 68, 162
BglII AGATCT 1 cut(s) 1008
BisI GCNGC 6 cut(s) 141, 285, 303, 306, 594, 669
BlsI GCNGC 6 cut(s) 142, 286, 304, 307, 595, 670
Bme1390I CCNGG 3 cut(s) 99, 344, 992
Bme18I GGWCC 1 cut(s) 838
BmgT120I GGNCC 1 cut(s) 838
BmiI GGNNCC 4 cut(s) 198, 1027, 1054, 1150
BmrFI CCNGG 3 cut(s) 99, 344, 992
BmsI GCATC 4 cut(s) 218, 590, 649, 985
BpiI GAAGAC 1 cut(s) 728
BpmI CTGGAG 1 cut(s) 867
BpuMI CCSGG 1 cut(s) 99
BsaI GGTCTC 1 cut(s) 806
BsaJI CCNNGG 5 cut(s) 98, 757, 796, 883, 990
BsaWI WCCGGW 1 cut(s) 962
BsaXI ACNNNNNCTCC 2 cut(s) 971, 1001
Bsc4I CCNNNNNNNGG 4 cut(s) 97, 386, 484, 888
Bse118I RCCGGY 1 cut(s) 44
Bse1I ACTGG 3 cut(s) 367, 560, 850
Bse3DI GCAATG 2 cut(s) 143, 1071
BseBI CCWGG 2 cut(s) 344, 992
BseDI CCNNGG 5 cut(s) 98, 757, 796, 883, 990
BseGI GGATG 7 cut(s) 108, 209, 352, 465, 553, 1000, 1059
BseLI CCNNNNNNNGG 4 cut(s) 97, 386, 484, 888
BseMI GCAATG 2 cut(s) 143, 1071
BseNI ACTGG 3 cut(s) 367, 560, 850
BseRI GAGGAG 1 cut(s) 696
BseXI GCAGC 6 cut(s) 127, 271, 289, 292, 605, 655
BsgI GTGCAG 1 cut(s) 612
BshFI GGCC 4 cut(s) 48, 246, 488, 741
BshNI GGYRCC 3 cut(s) 1025, 1052, 1148
BsiHKAI GWGCWC 1 cut(s) 989
BsiSI CCGG 3 cut(s) 45, 98, 963
BslI CCNNNNNNNGG 4 cut(s) 97, 386, 484, 888
BsmAI GTCTC 3 cut(s) 283, 806, 1038
BsmI GAATGC 1 cut(s) 500
BsnI GGCC 4 cut(s) 48, 246, 488, 741
Bso31I GGTCTC 1 cut(s) 806
Bsp1286I GDGCHC 1 cut(s) 989
Bsp143I GATC 5 cut(s) 7, 184, 354, 1008, 1139
BspANI GGCC 4 cut(s) 48, 246, 488, 741
BspLI GGNNCC 4 cut(s) 198, 1027, 1054, 1150
BspMAI CTGCAG 1 cut(s) 238
BspPI GGATC 1 cut(s) 1147
BspT107I GGYRCC 3 cut(s) 1025, 1052, 1148
BspTNI GGTCTC 1 cut(s) 806
BsrDI GCAATG 2 cut(s) 143, 1071
BsrFI RCCGGY 1 cut(s) 44
BsrI ACTGG 3 cut(s) 367, 560, 850
BssAI RCCGGY 1 cut(s) 44
BssECI CCNNGG 5 cut(s) 98, 757, 796, 883, 990
BssMI GATC 5 cut(s) 7, 184, 354, 1008, 1139
BssT1I CCWWGG 1 cut(s) 883
Bst2UI CCWGG 2 cut(s) 344, 992
Bst4CI ACNGT 3 cut(s) 758, 797, 937
Bst6I CTCTTC 1 cut(s) 417
BstAPI GCANNNNNTGC 1 cut(s) 599
BstC8I GCNNGC 6 cut(s) 46, 50, 117, 165, 169, 874
BstDSI CCRYGG 2 cut(s) 757, 796
BstF5I GGATG 7 cut(s) 108, 209, 352, 465, 553, 1000, 1059
BstKTI GATC 5 cut(s) 10, 187, 357, 1011, 1142
BstMAI GTCTC 3 cut(s) 283, 806, 1038
BstMBI GATC 5 cut(s) 7, 184, 354, 1008, 1139
BstMWI GCNNNNNNNGC 7 cut(s) 58, 173, 599, 659, 668, 878, 914
BstNI CCWGG 2 cut(s) 344, 992
BstNSI RCATGY 1 cut(s) 171
BstSCI CCNGG 3 cut(s) 97, 342, 990
BstSFI CTRYAG 3 cut(s) 234, 715, 1109
BstV1I GCAGC 6 cut(s) 127, 271, 289, 292, 605, 655
BstV2I GAAGAC 1 cut(s) 728
BstX2I RGATCY 2 cut(s) 1008, 1139
BstYI RGATCY 2 cut(s) 1008, 1139
BsuI GTATCC 2 cut(s) 68, 162
BsuRI GGCC 4 cut(s) 48, 246, 488, 741
BtgI CCRYGG 2 cut(s) 757, 796
BtsCI GGATG 7 cut(s) 108, 209, 352, 465, 553, 1000, 1059
BtsI GCAGTG 1 cut(s) 453
BtsIMutI CAGTG 2 cut(s) 453, 933
Cac8I GCNNGC 6 cut(s) 46, 50, 117, 165, 169, 874
Cfr10I RCCGGY 1 cut(s) 44
Cfr13I GGNCC 1 cut(s) 838
Csp6I GTAC 5 cut(s) 106, 622, 642, 793, 979
CviAII CATG 1 cut(s) 168
CviQI GTAC 5 cut(s) 106, 622, 642, 793, 979
DpnI GATC 5 cut(s) 9, 186, 356, 1010, 1141
DpnII GATC 5 cut(s) 7, 184, 354, 1008, 1139
EaeI YGGCCR 1 cut(s) 46
Eam1104I CTCTTC 1 cut(s) 417
EarI CTCTTC 1 cut(s) 417
Ecl136II GAGCTC 1 cut(s) 987
Eco130I CCWWGG 1 cut(s) 883
Eco147I AGGCCT 1 cut(s) 488
Eco24I GRGCYC 1 cut(s) 989
Eco31I GGTCTC 1 cut(s) 806
Eco47I GGWCC 1 cut(s) 838
Eco53kI GAGCTC 1 cut(s) 987
Eco57I CTGAAG 1 cut(s) 41
EcoICRI GAGCTC 1 cut(s) 987
EcoRII CCWGG 2 cut(s) 342, 990
EcoT14I CCWWGG 1 cut(s) 883
EcoT38I GRGCYC 1 cut(s) 989
ErhI CCWWGG 1 cut(s) 883
FaeI CATG 1 cut(s) 171
FalI AAGNNNNNCTT 6 cut(s) 497, 529, 995, 1027, 1022, 1054
FatI CATG 1 cut(s) 167
FauNDI CATATG 1 cut(s) 121
FbaI TGATCA 2 cut(s) 7, 354
FblI GTMKAC 1 cut(s) 714
Fnu4HI GCNGC 6 cut(s) 141, 285, 303, 306, 594, 669
FokI GGATG 7 cut(s) 115, 196, 359, 452, 560, 1007, 1046
FriOI GRGCYC 1 cut(s) 989
Fsp4HI GCNGC 6 cut(s) 141, 285, 303, 306, 594, 669
GluI GCNGC 6 cut(s) 141, 285, 303, 306, 594, 669
GsuI CTGGAG 1 cut(s) 867
HaeIII GGCC 4 cut(s) 48, 246, 488, 741
HapII CCGG 3 cut(s) 45, 98, 963
Hin1II CATG 1 cut(s) 171
HinfI GANTC 4 cut(s) 276, 334, 762, 821
HpaII CCGG 3 cut(s) 45, 98, 963
HphI GGTGA 3 cut(s) 407, 889, 977
Hpy166II GTNNAC 3 cut(s) 622, 715, 793
Hpy188I TCNGA 4 cut(s) 36, 339, 376, 736
Hpy188III TCNNGA 5 cut(s) 535, 585, 841, 1012, 1126
Hpy8I GTNNAC 3 cut(s) 622, 715, 793
HpyAV CCTTC 6 cut(s) 31, 33, 65, 620, 670, 1009
HpyCH4III ACNGT 3 cut(s) 758, 797, 937
HpyF10VI GCNNNNNNNGC 7 cut(s) 58, 173, 599, 659, 668, 878, 914
Hsp92II CATG 1 cut(s) 171
KroI GCCGGC 1 cut(s) 44
KroNI GCCGGC 1 cut(s) 46
Ksp22I TGATCA 2 cut(s) 7, 354
Kzo9I GATC 5 cut(s) 7, 184, 354, 1008, 1139
LmnI GCTCC 3 cut(s) 57, 313, 992
Lsp1109I GCAGC 6 cut(s) 127, 271, 289, 292, 605, 655
LweI GCATC 4 cut(s) 218, 590, 649, 985
MaeIII GTNAC 4 cut(s) 395, 470, 551, 572
MalI GATC 5 cut(s) 9, 186, 356, 1010, 1141
MboI GATC 5 cut(s) 7, 184, 354, 1008, 1139
MboII GAAGA 7 cut(s) 434, 597, 733, 859, 957, 1027, 1141
MfeI CAATTG 2 cut(s) 312, 927
MflI RGATCY 2 cut(s) 1008, 1139
MhlI GDGCHC 1 cut(s) 989
MluCI AATT 3 cut(s) 312, 692, 927
MlyI GAGTC 1 cut(s) 285
MnlI CCTC 9 cut(s) 418, 440, 513, 581, 674, 842, 970, 1015, 1073
MroNI GCCGGC 1 cut(s) 44
MroXI GAANNNNTTC 1 cut(s) 563
MseI TTAA 4 cut(s) 324, 516, 728, 1041
MspA1I CMGCKG 2 cut(s) 596, 1114
MspI CCGG 3 cut(s) 45, 98, 963
MspR9I CCNGG 3 cut(s) 99, 344, 992
MunI CAATTG 2 cut(s) 312, 927
Mva1269I GAATGC 1 cut(s) 500
MvaI CCWGG 2 cut(s) 344, 992
MwoI GCNNNNNNNGC 7 cut(s) 58, 173, 599, 659, 668, 878, 914
NaeI GCCGGC 1 cut(s) 46
NciI CCSGG 1 cut(s) 99
NdeI CATATG 1 cut(s) 121
NdeII GATC 5 cut(s) 7, 184, 354, 1008, 1139
NgoMIV GCCGGC 1 cut(s) 44
NlaIII CATG 1 cut(s) 171
NlaIV GGNNCC 4 cut(s) 198, 1027, 1054, 1150
NmuCI GTSAC 1 cut(s) 395
NspI RCATGY 1 cut(s) 171
PaeI GCATGC 1 cut(s) 171
PceI AGGCCT 1 cut(s) 488
PctI GAATGC 1 cut(s) 500
PdiI GCCGGC 1 cut(s) 46
PdmI GAANNNNTTC 1 cut(s) 563
PfeI GAWTC 3 cut(s) 334, 762, 821
PkrI GCNGC 6 cut(s) 142, 286, 304, 307, 595, 670
PleI GAGTC 1 cut(s) 284
PpsI GAGTC 1 cut(s) 284
Psp124BI GAGCTC 1 cut(s) 989
Psp6I CCWGG 2 cut(s) 342, 990
PspGI CCWGG 2 cut(s) 342, 990
PspN4I GGNNCC 4 cut(s) 198, 1027, 1054, 1150
PspPI GGNCC 1 cut(s) 838
PstI CTGCAG 1 cut(s) 238
PsuI RGATCY 2 cut(s) 1008, 1139
PvuII CAGCTG 2 cut(s) 596, 1114
RsaI GTAC 5 cut(s) 107, 623, 643, 794, 980
RsaNI GTAC 5 cut(s) 106, 622, 642, 793, 979
SacI GAGCTC 1 cut(s) 989
SaqAI TTAA 4 cut(s) 324, 516, 728, 1041
SatI GCNGC 6 cut(s) 141, 285, 303, 306, 594, 669
Sau3AI GATC 5 cut(s) 7, 184, 354, 1008, 1139
Sau96I GGNCC 1 cut(s) 838
SchI GAGTC 1 cut(s) 285
ScrFI CCNGG 3 cut(s) 99, 344, 992
SduI GDGCHC 1 cut(s) 989
SfaNI GCATC 4 cut(s) 218, 590, 649, 985
SfcI CTRYAG 3 cut(s) 234, 715, 1109
SinI GGWCC 1 cut(s) 838
SphI GCATGC 1 cut(s) 171
Sse9I AATT 3 cut(s) 312, 692, 927
SseBI AGGCCT 1 cut(s) 488
SstI GAGCTC 1 cut(s) 989
StuI AGGCCT 1 cut(s) 488
StyD4I CCNGG 3 cut(s) 97, 342, 990
StyI CCWWGG 1 cut(s) 883
TaaI ACNGT 3 cut(s) 758, 797, 937
TasI AATT 3 cut(s) 312, 692, 927
TatI WGTACW 2 cut(s) 621, 978
TfiI GAWTC 3 cut(s) 334, 762, 821
Tru1I TTAA 4 cut(s) 324, 516, 728, 1041
Tru9I TTAA 4 cut(s) 324, 516, 728, 1041
TscAI CASTG 2 cut(s) 460, 940
TseFI GTSAC 1 cut(s) 395
TseI GCWGC 6 cut(s) 140, 284, 302, 305, 593, 668
Tsp45I GTSAC 1 cut(s) 395
TspDTI ATGAA 3 cut(s) 363, 426, 813
TspGWI ACGGA 2 cut(s) 458, 1055
TspRI CASTG 2 cut(s) 460, 940
VpaK11BI GGWCC 1 cut(s) 838
XceI RCATGY 1 cut(s) 171
XmiI GTMKAC 1 cut(s) 714
XmnI GAANNNNTTC 1 cut(s) 563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.