pycom07g00770

Belongs to the mitochondrial carrier (TC 2.A.29) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0001633
Physical Location & Seq
Forward (+)
655083 .. 656731
1649 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g00770.3

Sequence Viewer

Length: 1155 bp
ATGGTTGATCAGGTTCAACATCCTTCTGTCGTCCAGAAGGTAGCTGGCCAGCTCCTTCAGCAATCTATCCAGGGTTACGATAATGGCTTCCAAAGACCAGGGATGTACCAAAGACGTGCATATGGGAACTACACTAATGCTGCATTGCAGTATCCCTTCATGCCAGCATGCAGAGCTACCACTGATATGTCTTTGGTTCCATCAACTGCATCTCCTATCTTTGTTCAAGCCCCTGCGGAGAAAGGCCACTTTCTTATTGATTTTCTCATGGGCGGAGTCTCTGCTGCTGTATCTAAAACTGCTGCTGCCCCAATTGAGCGTGTCAAGCTGTTGATTCAGAACCAGGACGAGATGATCAAAACTGGTCGTTTGTCTCAACCCTACAAGGGCATTGGTGAGTGCTTTAGCCGTACAATCAAGGAAGAGGGTTTTGGTTCATTGTGGAGAGGGAACACTGCCAATGTTATCCGTTACTTCCCCACTCAGGCCTTGAACTTTGCATTCAAAGATTACTTCAAGAGGCTGTTCAACTTCAAGAAAGACAGGGACGGTTATTGGAAATGGTTTGCTGGTAATTTGGCTTCAGGAGGTGCTGCTGGTGCTTCTTCTCTTTTCTTTGTCTACTCTTTGGATTATGCTCGTACTCGTTTGGCTAATGATGCTAAAGCTGCAAAGAAGGGAGGAGAAAGACAATTCAATGGTCTGGTTGATGTCTACAGGAAGACATTGAAATCTGATGGAATTGCCGGTCTTTACCGTGGATTCAACATCTCTTGTGTTGGAATTATTGTCTACCGTGGTCTCTACTTTGGACTGTACGATTCACTGAAGCCTGTTGTCCTGACTGGAGGCTTGCAGGATAGTTTCTTCGCTAGCTTTGCCCTCGGTTGGCTCATCACCAATGGTGCTGGTCTTGCATCCTACCCAATTGACACTGTCCGCAGAAGAATGATGATGACCTCCGGTGAAGCCGTCAAGTACAAGAGTTCCCTGGATGCCTTCCAACAAATCTTGAAGAACGAGGGTGCCAAGTCTCTCTTCAAGGGTGCTGGTGCAAACATCCTCCGTGCTATTGCTGGCGCTGGTGTGCTCTCTGGTTATGACAAGCTTCAGCTGCTTGTGTTTGGCAAGAAATACGGATCTGGTTCCGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000295 GO:0003674 GO:0005215 GO:0005346 GO:0005347 GO:0005471 GO:0005488 GO:0005507 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006839 GO:0006855 GO:0006862 GO:0006996 GO:0007005 GO:0007006 GO:0008150 GO:0008509 GO:0008514 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0015075 GO:0015215 GO:0015216 GO:0015217 GO:0015238 GO:0015291 GO:0015297 GO:0015301 GO:0015605 GO:0015711 GO:0015748 GO:0015865 GO:0015866 GO:0015867 GO:0015868 GO:0015893 GO:0015931 GO:0015932 GO:0016020 GO:0016021 GO:0016043 GO:0019866 GO:0022804 GO:0022857 GO:0030312 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0034220 GO:0042221 GO:0042493 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044429 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0046902 GO:0046914 GO:0050896 GO:0051179 GO:0051234 GO:0051503 GO:0055085 GO:0061024 GO:0065007 GO:0065008 GO:0070013 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0090559 GO:0098588 GO:0098656 GO:0098805 GO:0099516 GO:1901264 GO:1901505 GO:1901679
KEGG Pathways
Metabolic & Signaling
ko00514 ko04020 ko04022 ko04217 ko04218 ko05012 ko05016 ko05166 map00514 map04020 map04022 map04217 map04218 map05012 map05016 map05166
Pfam Domains
Protein Families
Mito_carr

Protein Analysis

385

Amino Acids

42.04

Weight (kDa)

9.78

Isoelectric Point (pI)

30.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1025
AccI GTMKAC 3 cut(s) 621, 714, 792
AciI CCGC 3 cut(s) 236, 273, 940
AclWI GGATC 1 cut(s) 1147
AcoI YGGCCR 1 cut(s) 46
AcuI CTGAAG 4 cut(s) 41, 567, 848, 1094
AfaI GTAC 5 cut(s) 107, 412, 643, 818, 980
AfiI CCNNNNNNNGG 3 cut(s) 386, 484, 888
AjiI CACGTC 1 cut(s) 116
AjnI CCWGG 4 cut(s) 69, 97, 342, 990
AjuI GAANNNNNNNTTGG 4 cut(s) 414, 446, 1022, 1054
AluBI AGCT 8 cut(s) 44, 52, 176, 328, 668, 876, 1108, 1114
AluI AGCT 8 cut(s) 44, 52, 176, 328, 668, 876, 1108, 1114
Alw21I GWGCWC 1 cut(s) 1092
Alw26I GTCTC 4 cut(s) 283, 378, 806, 1038
AlwI GGATC 1 cut(s) 1147
AoxI GGCC 3 cut(s) 46, 244, 486
ApeKI GCWGC 7 cut(s) 140, 284, 302, 305, 593, 668, 1114
AspLEI GCGC 1 cut(s) 1082
AsuHPI GGTGA 3 cut(s) 407, 889, 977
AsuNHI GCTAGC 1 cut(s) 872
BalI TGGCCA 1 cut(s) 48
BanI GGYRCC 1 cut(s) 1025
BarI GAAGNNNNNNTAC 2 cut(s) 565, 597
BbsI GAAGAC 1 cut(s) 728
Bbv12I GWGCWC 1 cut(s) 1092
BbvI GCAGC 7 cut(s) 127, 271, 289, 292, 580, 655, 1101
BccI CCATC 2 cut(s) 208, 731
BceAI ACGGC 2 cut(s) 393, 956
BciT130I CCWGG 4 cut(s) 71, 99, 344, 992
BciVI GTATCC 1 cut(s) 162
BclI TGATCA 2 cut(s) 7, 354
BcoDI GTCTC 4 cut(s) 283, 378, 806, 1038
BfaI CTAG 1 cut(s) 873
BfmI CTRYAG 1 cut(s) 715
BfoI RGCGCY 1 cut(s) 1083
BfuI GTATCC 1 cut(s) 162
BisI GCNGC 7 cut(s) 141, 285, 303, 306, 594, 669, 1115
BlsI GCNGC 7 cut(s) 142, 286, 304, 307, 595, 670, 1116
Bme1390I CCNGG 4 cut(s) 71, 99, 344, 992
BmgBI CACGTC 1 cut(s) 116
BmiI GGNNCC 3 cut(s) 198, 1027, 1147
BmrFI CCNGG 4 cut(s) 71, 99, 344, 992
BmsI GCATC 4 cut(s) 218, 649, 926, 985
BmtI GCTAGC 1 cut(s) 876
BpiI GAAGAC 1 cut(s) 728
BpmI CTGGAG 1 cut(s) 867
BsaI GGTCTC 1 cut(s) 806
BsaJI CCNNGG 6 cut(s) 70, 98, 757, 796, 883, 990
BsaWI WCCGGW 2 cut(s) 962, 1148
BsaXI ACNNNNNCTCC 2 cut(s) 196, 226
Bsc4I CCNNNNNNNGG 3 cut(s) 386, 484, 888
Bse118I RCCGGY 1 cut(s) 746
Bse1I ACTGG 2 cut(s) 367, 850
Bse3DI GCAATG 1 cut(s) 143
BseBI CCWGG 4 cut(s) 71, 99, 344, 992
BseDI CCNNGG 6 cut(s) 70, 98, 757, 796, 883, 990
BseGI GGATG 5 cut(s) 19, 108, 917, 1000, 1059
BseLI CCNNNNNNNGG 3 cut(s) 386, 484, 888
BseMI GCAATG 1 cut(s) 143
BseMII CTCAG 1 cut(s) 497
BseNI ACTGG 2 cut(s) 367, 850
BseRI GAGGAG 1 cut(s) 696
BseXI GCAGC 7 cut(s) 127, 271, 289, 292, 580, 655, 1101
BshFI GGCC 3 cut(s) 48, 246, 488
BshNI GGYRCC 1 cut(s) 1025
BsiHKAI GWGCWC 1 cut(s) 1092
BsiSI CCGG 3 cut(s) 747, 963, 1149
BslFI GGGAC 1 cut(s) 560
BslI CCNNNNNNNGG 3 cut(s) 386, 484, 888
BsmAI GTCTC 4 cut(s) 283, 378, 806, 1038
BsmFI GGGAC 1 cut(s) 560
BsmI GAATGC 1 cut(s) 500
BsnI GGCC 3 cut(s) 48, 246, 488
Bso31I GGTCTC 1 cut(s) 806
Bsp1286I GDGCHC 1 cut(s) 1092
Bsp143I GATC 3 cut(s) 7, 354, 1139
BspACI CCGC 3 cut(s) 236, 273, 940
BspANI GGCC 3 cut(s) 48, 246, 488
BspCNI CTCAG 1 cut(s) 496
BspLI GGNNCC 3 cut(s) 198, 1027, 1147
BspOI GCTAGC 1 cut(s) 876
BspPI GGATC 1 cut(s) 1147
BspT107I GGYRCC 1 cut(s) 1025
BspTNI GGTCTC 1 cut(s) 806
BsrDI GCAATG 1 cut(s) 143
BsrFI RCCGGY 1 cut(s) 746
BsrI ACTGG 2 cut(s) 367, 850
BssAI RCCGGY 1 cut(s) 746
BssECI CCNNGG 6 cut(s) 70, 98, 757, 796, 883, 990
BssMI GATC 3 cut(s) 7, 354, 1139
Bst2UI CCWGG 4 cut(s) 71, 99, 344, 992
Bst4CI ACNGT 5 cut(s) 551, 758, 797, 816, 937
Bst6I CTCTTC 2 cut(s) 417, 1043
BstC8I GCNNGC 7 cut(s) 46, 50, 165, 169, 854, 874, 1078
BstDEI CTNAG 1 cut(s) 483
BstDSI CCRYGG 2 cut(s) 757, 796
BstF5I GGATG 5 cut(s) 19, 108, 917, 1000, 1059
BstH2I RGCGCY 1 cut(s) 1083
BstHHI GCGC 1 cut(s) 1082
BstKTI GATC 3 cut(s) 10, 357, 1142
BstMAI GTCTC 4 cut(s) 283, 378, 806, 1038
BstMBI GATC 3 cut(s) 7, 354, 1139
BstMWI GCNNNNNNNGC 9 cut(s) 58, 173, 325, 599, 659, 668, 878, 914, 1114
BstNI CCWGG 4 cut(s) 71, 99, 344, 992
BstNSI RCATGY 1 cut(s) 171
BstSCI CCNGG 4 cut(s) 69, 97, 342, 990
BstSFI CTRYAG 1 cut(s) 715
BstV1I GCAGC 7 cut(s) 127, 271, 289, 292, 580, 655, 1101
BstV2I GAAGAC 1 cut(s) 728
BstX2I RGATCY 1 cut(s) 1139
BstYI RGATCY 1 cut(s) 1139
BsuI GTATCC 1 cut(s) 162
BsuRI GGCC 3 cut(s) 48, 246, 488
BtgI CCRYGG 2 cut(s) 757, 796
BtrI CACGTC 1 cut(s) 116
BtsCI GGATG 5 cut(s) 19, 108, 917, 1000, 1059
BtsI GCAGTG 1 cut(s) 453
BtsIMutI CAGTG 4 cut(s) 180, 453, 824, 933
Cac8I GCNNGC 7 cut(s) 46, 50, 165, 169, 854, 874, 1078
CfoI GCGC 1 cut(s) 1082
Cfr10I RCCGGY 1 cut(s) 746
Csp6I GTAC 5 cut(s) 106, 411, 642, 817, 979
CviAII CATG 3 cut(s) 160, 168, 268
CviQI GTAC 5 cut(s) 106, 411, 642, 817, 979
DdeI CTNAG 1 cut(s) 483
DpnI GATC 3 cut(s) 9, 356, 1141
DpnII GATC 3 cut(s) 7, 354, 1139
EaeI YGGCCR 1 cut(s) 46
Eam1104I CTCTTC 2 cut(s) 417, 1043
EarI CTCTTC 2 cut(s) 417, 1043
EciI GGCGGA 1 cut(s) 288
Eco147I AGGCCT 1 cut(s) 488
Eco31I GGTCTC 1 cut(s) 806
Eco57I CTGAAG 4 cut(s) 41, 567, 848, 1094
EcoRII CCWGG 4 cut(s) 69, 97, 342, 990
FaeI CATG 3 cut(s) 163, 171, 271
FaiI YATR 8 cut(s) 121, 123, 161, 169, 188, 269, 636, 1101
FalI AAGNNNNNCTT 2 cut(s) 1022, 1054
FaqI GGGAC 1 cut(s) 560
FatI CATG 3 cut(s) 159, 167, 267
FauNDI CATATG 1 cut(s) 121
FbaI TGATCA 2 cut(s) 7, 354
FblI GTMKAC 3 cut(s) 621, 714, 792
Fnu4HI GCNGC 7 cut(s) 141, 285, 303, 306, 594, 669, 1115
FokI GGATG 5 cut(s) 6, 115, 904, 1007, 1046
Fsp4HI GCNGC 7 cut(s) 141, 285, 303, 306, 594, 669, 1115
FspBI CTAG 1 cut(s) 873
GlaI GCGC 1 cut(s) 1081
GluI GCNGC 7 cut(s) 141, 285, 303, 306, 594, 669, 1115
GsuI CTGGAG 1 cut(s) 867
HaeII RGCGCY 1 cut(s) 1083
HaeIII GGCC 3 cut(s) 48, 246, 488
HapII CCGG 3 cut(s) 747, 963, 1149
HhaI GCGC 1 cut(s) 1082
Hin1II CATG 3 cut(s) 163, 171, 271
Hin6I GCGC 1 cut(s) 1080
HinP1I GCGC 1 cut(s) 1080
HindIII AAGCTT 1 cut(s) 1106
HinfI GANTC 4 cut(s) 276, 334, 762, 821
HpaII CCGG 3 cut(s) 747, 963, 1149
HphI GGTGA 3 cut(s) 407, 889, 977
Hpy166II GTNNAC 3 cut(s) 622, 715, 793
Hpy188I TCNGA 2 cut(s) 339, 736
Hpy188III TCNNGA 6 cut(s) 34, 517, 535, 585, 841, 1012
Hpy8I GTNNAC 3 cut(s) 622, 715, 793
HpyAV CCTTC 6 cut(s) 31, 33, 65, 166, 670, 1009
HpyCH4III ACNGT 5 cut(s) 551, 758, 797, 816, 937
HpyCH4IV ACGT 1 cut(s) 115
HpyF10VI GCNNNNNNNGC 9 cut(s) 58, 173, 325, 599, 659, 668, 878, 914, 1114
HpyF3I CTNAG 1 cut(s) 483
HpySE526I ACGT 1 cut(s) 115
Hsp92II CATG 3 cut(s) 163, 171, 271
HspAI GCGC 1 cut(s) 1080
Ksp22I TGATCA 2 cut(s) 7, 354
Kzo9I GATC 3 cut(s) 7, 354, 1139
LmnI GCTCC 1 cut(s) 57
Lsp1109I GCAGC 7 cut(s) 127, 271, 289, 292, 580, 655, 1101
LweI GCATC 4 cut(s) 218, 649, 926, 985
MaeI CTAG 1 cut(s) 873
MaeII ACGT 1 cut(s) 115
MaeIII GTNAC 2 cut(s) 74, 470
MalI GATC 3 cut(s) 9, 356, 1141
MboI GATC 3 cut(s) 7, 354, 1139
MboII GAAGA 7 cut(s) 434, 597, 733, 859, 957, 1027, 1030
MfeI CAATTG 2 cut(s) 312, 927
MflI RGATCY 1 cut(s) 1139
MhlI GDGCHC 1 cut(s) 1092
MlsI TGGCCA 1 cut(s) 48
MluCI AATT 6 cut(s) 312, 574, 692, 741, 783, 927
MluNI TGGCCA 1 cut(s) 48
MlyI GAGTC 1 cut(s) 285
MmeI TCCRAC 2 cut(s) 760, 1027
Mox20I TGGCCA 1 cut(s) 48
MscI TGGCCA 1 cut(s) 48
MseI TTAA 1 cut(s) 1153
MslI CAYNNNNRTG 1 cut(s) 185
Msp20I TGGCCA 1 cut(s) 48
MspA1I CMGCKG 1 cut(s) 1114
MspI CCGG 3 cut(s) 747, 963, 1149
MspR9I CCNGG 4 cut(s) 71, 99, 344, 992
MunI CAATTG 2 cut(s) 312, 927
Mva1269I GAATGC 1 cut(s) 500
MvaI CCWGG 4 cut(s) 71, 99, 344, 992
MwoI GCNNNNNNNGC 9 cut(s) 58, 173, 325, 599, 659, 668, 878, 914, 1114
NdeI CATATG 1 cut(s) 121
NdeII GATC 3 cut(s) 7, 354, 1139
NheI GCTAGC 1 cut(s) 872
NlaIII CATG 3 cut(s) 163, 171, 271
NlaIV GGNNCC 3 cut(s) 198, 1027, 1147
NspI RCATGY 1 cut(s) 171
PaeI GCATGC 1 cut(s) 171
PceI AGGCCT 1 cut(s) 488
PctI GAATGC 1 cut(s) 500
PfeI GAWTC 3 cut(s) 334, 762, 821
PflFI GACNNNGTC 1 cut(s) 935
PkrI GCNGC 7 cut(s) 142, 286, 304, 307, 595, 670, 1116
PleI GAGTC 1 cut(s) 284
PpsI GAGTC 1 cut(s) 284
Psp6I CCWGG 4 cut(s) 69, 97, 342, 990
PspGI CCWGG 4 cut(s) 69, 97, 342, 990
PspN4I GGNNCC 3 cut(s) 198, 1027, 1147
PsuI RGATCY 1 cut(s) 1139
PsyI GACNNNGTC 1 cut(s) 935
PvuII CAGCTG 1 cut(s) 1114
RsaI GTAC 5 cut(s) 107, 412, 643, 818, 980
RsaNI GTAC 5 cut(s) 106, 411, 642, 817, 979
RseI CAYNNNNRTG 1 cut(s) 185
SaqAI TTAA 1 cut(s) 1153
SatI GCNGC 7 cut(s) 141, 285, 303, 306, 594, 669, 1115
Sau3AI GATC 3 cut(s) 7, 354, 1139
SchI GAGTC 1 cut(s) 285
ScrFI CCNGG 4 cut(s) 71, 99, 344, 992
SduI GDGCHC 1 cut(s) 1092
SfaNI GCATC 4 cut(s) 218, 649, 926, 985
SfcI CTRYAG 1 cut(s) 715
SmiMI CAYNNNNRTG 1 cut(s) 185
SphI GCATGC 1 cut(s) 171
Sse9I AATT 6 cut(s) 312, 574, 692, 741, 783, 927
SseBI AGGCCT 1 cut(s) 488
SsiI CCGC 3 cut(s) 236, 273, 940
SspMI CTAG 1 cut(s) 873
StuI AGGCCT 1 cut(s) 488
StyD4I CCNGG 4 cut(s) 69, 97, 342, 990
TaaI ACNGT 5 cut(s) 551, 758, 797, 816, 937
TaiI ACGT 1 cut(s) 118
TasI AATT 6 cut(s) 312, 574, 692, 741, 783, 927
TatI WGTACW 1 cut(s) 978
TfiI GAWTC 3 cut(s) 334, 762, 821
Tru1I TTAA 1 cut(s) 1153
Tru9I TTAA 1 cut(s) 1153
TscAI CASTG 4 cut(s) 187, 460, 831, 940
TseI GCWGC 7 cut(s) 140, 284, 302, 305, 593, 668, 1114
TspDTI ATGAA 2 cut(s) 148, 426
TspGWI ACGGA 3 cut(s) 458, 1055, 1152
TspRI CASTG 4 cut(s) 187, 460, 831, 940
Tth111I GACNNNGTC 1 cut(s) 935
XceI RCATGY 1 cut(s) 171
XcmI CCANNNNNNNNNTGG 1 cut(s) 41
XmiI GTMKAC 3 cut(s) 621, 714, 792
XspI CTAG 1 cut(s) 873
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.